BLASTX nr result
ID: Ephedra29_contig00004004
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra29_contig00004004
(944 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ADE77937.1 unknown [Picea sitchensis] 183 8e-53
XP_019054994.1 PREDICTED: THO complex subunit 4D isoform X2 [Nel... 181 3e-52
XP_019054993.1 PREDICTED: THO complex subunit 4D isoform X1 [Nel... 181 7e-52
ONK66208.1 uncharacterized protein A4U43_C06F5350 [Asparagus off... 180 1e-51
XP_020089787.1 THO complex subunit 4D isoform X2 [Ananas comosus] 177 1e-50
XP_020089786.1 THO complex subunit 4D isoform X1 [Ananas comosus] 176 5e-50
XP_018681863.1 PREDICTED: THO complex subunit 4C isoform X2 [Mus... 174 5e-50
XP_009399738.1 PREDICTED: THO complex subunit 4D isoform X1 [Mus... 174 2e-49
XP_018678081.1 PREDICTED: THO complex subunit 4D-like isoform X2... 173 5e-49
XP_009387818.1 PREDICTED: THO complex subunit 4D-like isoform X1... 173 1e-48
AQK52402.1 THO complex subunit 4C [Zea mays] 165 3e-46
EOY07572.1 RNA-binding family protein [Theobroma cacao] 165 4e-46
XP_006826913.1 PREDICTED: THO complex subunit 4D [Amborella tric... 166 5e-46
XP_019185424.1 PREDICTED: THO complex subunit 4D [Ipomoea nil] 166 5e-46
XP_007027070.2 PREDICTED: THO complex subunit 4B [Theobroma cacao] 163 2e-45
JAT56277.1 RNA and export factor-binding protein 2 [Anthurium am... 164 2e-45
XP_015649901.1 PREDICTED: THO complex subunit 4D isoform X2 [Ory... 163 5e-45
XP_016572542.1 PREDICTED: THO complex subunit 4D isoform X2 [Cap... 160 8e-45
KMZ69218.1 putative RNA and export factor binding protein [Zoste... 163 1e-44
NP_001146561.1 THO complex subunit 4C [Zea mays] ACL54279.1 unkn... 162 1e-44
>ADE77937.1 unknown [Picea sitchensis]
Length = 274
Score = 183 bits (465), Expect = 8e-53
Identities = 103/216 (47%), Positives = 137/216 (63%), Gaps = 5/216 (2%)
Frame = +1
Query: 19 QSFNRTKGAIWQNGLLEDSLXXXXXXXXXNA--KLYISNLDYGVSNQDIKELFSEVGELK 192
+SFNR KG +WQ+ + EDS+ KLY+SNLD GVSNQDIKELF+EVG+LK
Sbjct: 70 KSFNRAKGVVWQHDMFEDSMAAIGMPIGLETGTKLYVSNLDSGVSNQDIKELFTEVGDLK 129
Query: 193 SSSVHYDRNGRSNGTAEVVFARQNDAVAAMRRYNGVQLDGKPMKIELIGPTIALPVS-RI 369
S ++HYDR+GRSNGTAEVVF ++ DAVAA++RYN VQLDGKPMKIEL+G ++LP+S R+
Sbjct: 130 SCALHYDRSGRSNGTAEVVFVKKVDAVAAVKRYNNVQLDGKPMKIELVGTGLSLPLSARV 189
Query: 370 GVPAATLGRGQRPMLPINQGILRPRGVGRGSQ--GGASFGQRRNRLGTSAXXXXXXXXXX 543
V + GRG+R ++ + G R Q G ++ +RR R
Sbjct: 190 NVTGTSAGRGRRTVV-MTPGFTRAAADASMEQRGGNGNWNRRRGRRSNG----------R 238
Query: 544 XXXXXXXXXXNQDPARSAEDLDKDLENYHAQAMETS 651
+Q P +SA +LDK+LENYH +AM+TS
Sbjct: 239 GRGGRRGRGRSQVPDKSAAELDKELENYHTEAMQTS 274
>XP_019054994.1 PREDICTED: THO complex subunit 4D isoform X2 [Nelumbo nucifera]
Length = 266
Score = 181 bits (460), Expect = 3e-52
Identities = 102/213 (47%), Positives = 136/213 (63%), Gaps = 2/213 (0%)
Frame = +1
Query: 19 QSFNRTKGAIWQNGLLEDSLXXXXXXXXXNA-KLYISNLDYGVSNQDIKELFSEVGELKS 195
+S++RTK W++ L EDSL N KLY+SNLDYGV+N+DIKELFSE+GELK
Sbjct: 63 KSYSRTKDFSWKHDLFEDSLIAAGLSGIDNGTKLYVSNLDYGVTNEDIKELFSEIGELKR 122
Query: 196 SSVHYDRNGRSNGTAEVVFARQNDAVAAMRRYNGVQLDGKPMKIELIGPTIALPVS-RIG 372
++HYDRNG +G+AEVVF R++DA+AA++RYN V LDGKPMKIE+IG + LPVS R+
Sbjct: 123 YALHYDRNGHPSGSAEVVFLRRSDALAALKRYNNVILDGKPMKIEIIGTNLELPVSARVN 182
Query: 373 VPAATLGRGQRPMLPINQGILRPRGVGRGSQGGASFGQRRNRLGTSAXXXXXXXXXXXXX 552
V GRG+R ++ + G+ R RG GS+G + +RR
Sbjct: 183 VIGGANGRGKRTVV-MTPGVGRGRGSIAGSRGSGRWSRRRG--------AGRGGRGRGRG 233
Query: 553 XXXXXXXNQDPARSAEDLDKDLENYHAQAMETS 651
Q +SAE+LDK+LENYHA+AM+TS
Sbjct: 234 RGRGRGRKQTTEKSAEELDKELENYHAEAMQTS 266
>XP_019054993.1 PREDICTED: THO complex subunit 4D isoform X1 [Nelumbo nucifera]
Length = 293
Score = 181 bits (460), Expect = 7e-52
Identities = 102/213 (47%), Positives = 136/213 (63%), Gaps = 2/213 (0%)
Frame = +1
Query: 19 QSFNRTKGAIWQNGLLEDSLXXXXXXXXXNA-KLYISNLDYGVSNQDIKELFSEVGELKS 195
+S++RTK W++ L EDSL N KLY+SNLDYGV+N+DIKELFSE+GELK
Sbjct: 90 KSYSRTKDFSWKHDLFEDSLIAAGLSGIDNGTKLYVSNLDYGVTNEDIKELFSEIGELKR 149
Query: 196 SSVHYDRNGRSNGTAEVVFARQNDAVAAMRRYNGVQLDGKPMKIELIGPTIALPVS-RIG 372
++HYDRNG +G+AEVVF R++DA+AA++RYN V LDGKPMKIE+IG + LPVS R+
Sbjct: 150 YALHYDRNGHPSGSAEVVFLRRSDALAALKRYNNVILDGKPMKIEIIGTNLELPVSARVN 209
Query: 373 VPAATLGRGQRPMLPINQGILRPRGVGRGSQGGASFGQRRNRLGTSAXXXXXXXXXXXXX 552
V GRG+R ++ + G+ R RG GS+G + +RR
Sbjct: 210 VIGGANGRGKRTVV-MTPGVGRGRGSIAGSRGSGRWSRRRG--------AGRGGRGRGRG 260
Query: 553 XXXXXXXNQDPARSAEDLDKDLENYHAQAMETS 651
Q +SAE+LDK+LENYHA+AM+TS
Sbjct: 261 RGRGRGRKQTTEKSAEELDKELENYHAEAMQTS 293
>ONK66208.1 uncharacterized protein A4U43_C06F5350 [Asparagus officinalis]
Length = 272
Score = 180 bits (457), Expect = 1e-51
Identities = 108/225 (48%), Positives = 137/225 (60%), Gaps = 14/225 (6%)
Frame = +1
Query: 19 QSFNRTKGAIWQNGLLEDSLXXXXXXXXXNA-KLYISNLDYGVSNQDIKELFSEVGELKS 195
+SF+RTK IW++ L ++S+ KLYISNLDYGVSN+DIKELFSE+G LK
Sbjct: 67 KSFSRTKDNIWRHDLFDESMKAAGLTGVETGTKLYISNLDYGVSNEDIKELFSEIGTLKR 126
Query: 196 SSVHYDRNGRSNGTAEVVFARQNDAVAAMRRYNGVQLDGKPMKIELIGPTIALPVS-RIG 372
S+VHYDRNGR +G+AEVVFAR++DA+AAM+RYN VQLDGK MKIE+IG + LPV+ RI
Sbjct: 127 SAVHYDRNGRPSGSAEVVFARRSDAMAAMKRYNNVQLDGKAMKIEIIGTNLGLPVTPRIN 186
Query: 373 VPAATLGRGQRPML---PINQGILRP---------RGVGRGSQGGASFGQRRNRLGTSAX 516
V GRG+R ++ QG RP G RG+ G GQ R R G
Sbjct: 187 VVGGANGRGRRTVVMTPEFGQGGTRPFKRTPRPNRGGFQRGTGRGRGRGQARGRGGRG-- 244
Query: 517 XXXXXXXXXXXXXXXXXXXNQDPARSAEDLDKDLENYHAQAMETS 651
+ +SA+DLDKDL++YHA+AM TS
Sbjct: 245 -----------------RGRKPVVKSADDLDKDLDSYHAEAMNTS 272
>XP_020089787.1 THO complex subunit 4D isoform X2 [Ananas comosus]
Length = 269
Score = 177 bits (450), Expect = 1e-50
Identities = 104/218 (47%), Positives = 129/218 (59%), Gaps = 3/218 (1%)
Frame = +1
Query: 7 FPNLQSFNRTKGAIWQNGLLEDSLXXXXXXXXXNA-KLYISNLDYGVSNQDIKELFSEVG 183
F +SF+R K IW++ L DS+ KLYISNLDYGVSN+DIKELFSEVG
Sbjct: 58 FAIAKSFSRAKDMIWRHDLFNDSMVAAGLSGVETGTKLYISNLDYGVSNEDIKELFSEVG 117
Query: 184 ELKSSSVHYDRNGRSNGTAEVVFARQNDAVAAMRRYNGVQLDGKPMKIELIGPTIALPVS 363
ELK +VHYDRNGR +G+AEVVF R++DA+AA++RYN VQLDGK MKIE+IG + LPV+
Sbjct: 118 ELKRWAVHYDRNGRPSGSAEVVFTRRSDAIAALKRYNNVQLDGKTMKIEVIGMNLGLPVT 177
Query: 364 -RIGVPAATLGRGQRPMLPINQGILRPR-GVGRGSQGGASFGQRRNRLGTSAXXXXXXXX 537
R+ V T GRG+R + ++ P G G GS S G R
Sbjct: 178 PRVNVVGGTNGRGKRTV------VMTPEFGRGGGSSSNRSSGWNRGGFQRGRGRARGSGF 231
Query: 538 XXXXXXXXXXXXNQDPARSAEDLDKDLENYHAQAMETS 651
Q +SAE LDK+L+NYHA AM TS
Sbjct: 232 QRGRGRGRGRGRKQAVEKSAEQLDKELDNYHADAMNTS 269
>XP_020089786.1 THO complex subunit 4D isoform X1 [Ananas comosus]
Length = 270
Score = 176 bits (446), Expect = 5e-50
Identities = 106/222 (47%), Positives = 131/222 (59%), Gaps = 7/222 (3%)
Frame = +1
Query: 7 FPNLQSFNRTKGAIWQNGLLEDSLXXXXXXXXXNA-KLYISNLDYGVSNQDIKELFSEVG 183
F +SF+R K IW++ L DS+ KLYISNLDYGVSN+DIKELFSEVG
Sbjct: 58 FAIAKSFSRAKDMIWRHDLFNDSMVAAGLSGVETGTKLYISNLDYGVSNEDIKELFSEVG 117
Query: 184 ELKSSSVHYDRNGRSNGTAEVVFARQNDAVAAMRRYNGVQLDGKPMKIELIGPTIALPVS 363
ELK +VHYDRNGR +G+AEVVF R++DA+AA++RYN VQLDGK MKIE+IG + LPV+
Sbjct: 118 ELKRWAVHYDRNGRPSGSAEVVFTRRSDAIAALKRYNNVQLDGKTMKIEVIGMNLGLPVT 177
Query: 364 -RIGVPAATLGRGQR-----PMLPINQGILRPRGVGRGSQGGASFGQRRNRLGTSAXXXX 525
R+ V T GRG+R P G R GR ++GG G+ R R
Sbjct: 178 PRVNVVGGTNGRGKRTVVMTPEFGRGGGSSSNRSSGRWNRGGFQRGRGRAR--------- 228
Query: 526 XXXXXXXXXXXXXXXXNQDPARSAEDLDKDLENYHAQAMETS 651
Q +SAE LDK+L+NYHA AM TS
Sbjct: 229 GSGFQRGRGRGRGRGRKQAVEKSAEQLDKELDNYHADAMNTS 270
>XP_018681863.1 PREDICTED: THO complex subunit 4C isoform X2 [Musa acuminata subsp.
malaccensis]
Length = 217
Score = 174 bits (441), Expect = 5e-50
Identities = 101/219 (46%), Positives = 136/219 (62%), Gaps = 9/219 (4%)
Frame = +1
Query: 22 SFNRTKGAIWQNGLLEDSLXXXXXXXXXNA-KLYISNLDYGVSNQDIKELFSEVGELKSS 198
SF+RTK IW++ L +DS+ KLYISNLDYGVSN+DI+ELFSEVG+LK
Sbjct: 2 SFSRTKDMIWRHDLFDDSMVAAGISGIETGTKLYISNLDYGVSNEDIRELFSEVGDLKRF 61
Query: 199 SVHYDRNGRSNGTAEVVFARQNDAVAAMRRYNGVQLDGKPMKIELIGPTIALPVS-RIGV 375
+VHYDR GR +G+AEVV+ R++DA+AA++RYN VQLDGKPMKIE+IG + LPV+ R+ V
Sbjct: 62 AVHYDRTGRPSGSAEVVYTRRSDAMAALKRYNNVQLDGKPMKIEVIGTNLGLPVTPRVNV 121
Query: 376 PAATLGRGQRPMLPINQGILRPRGVGRG-------SQGGASFGQRRNRLGTSAXXXXXXX 534
GRG+R ++ Q + RG R ++GG G+ R R S+
Sbjct: 122 LGGPNGRGKRTVVMTPQFV---RGGSRSFNRASGTNRGGFQRGRGRGRGRGSSVRGIGRG 178
Query: 535 XXXXXXXXXXXXXNQDPARSAEDLDKDLENYHAQAMETS 651
Q+ +SA+DLDK+L+ YHA+AM TS
Sbjct: 179 SVRGIGRGRGSGRMQNVEKSADDLDKELDTYHAEAMNTS 217
>XP_009399738.1 PREDICTED: THO complex subunit 4D isoform X1 [Musa acuminata subsp.
malaccensis]
Length = 279
Score = 174 bits (442), Expect = 2e-49
Identities = 101/220 (45%), Positives = 137/220 (62%), Gaps = 9/220 (4%)
Frame = +1
Query: 19 QSFNRTKGAIWQNGLLEDSLXXXXXXXXXNA-KLYISNLDYGVSNQDIKELFSEVGELKS 195
+SF+RTK IW++ L +DS+ KLYISNLDYGVSN+DI+ELFSEVG+LK
Sbjct: 63 KSFSRTKDMIWRHDLFDDSMVAAGISGIETGTKLYISNLDYGVSNEDIRELFSEVGDLKR 122
Query: 196 SSVHYDRNGRSNGTAEVVFARQNDAVAAMRRYNGVQLDGKPMKIELIGPTIALPVS-RIG 372
+VHYDR GR +G+AEVV+ R++DA+AA++RYN VQLDGKPMKIE+IG + LPV+ R+
Sbjct: 123 FAVHYDRTGRPSGSAEVVYTRRSDAMAALKRYNNVQLDGKPMKIEVIGTNLGLPVTPRVN 182
Query: 373 VPAATLGRGQRPMLPINQGILRPRGVGRG-------SQGGASFGQRRNRLGTSAXXXXXX 531
V GRG+R ++ Q + RG R ++GG G+ R R S+
Sbjct: 183 VLGGPNGRGKRTVVMTPQFV---RGGSRSFNRASGTNRGGFQRGRGRGRGRGSSVRGIGR 239
Query: 532 XXXXXXXXXXXXXXNQDPARSAEDLDKDLENYHAQAMETS 651
Q+ +SA+DLDK+L+ YHA+AM TS
Sbjct: 240 GSVRGIGRGRGSGRMQNVEKSADDLDKELDTYHAEAMNTS 279
>XP_018678081.1 PREDICTED: THO complex subunit 4D-like isoform X2 [Musa acuminata
subsp. malaccensis]
Length = 259
Score = 173 bits (438), Expect = 5e-49
Identities = 104/229 (45%), Positives = 137/229 (59%), Gaps = 19/229 (8%)
Frame = +1
Query: 22 SFNRTKGAIWQNGLLEDSLXXXXXXXXXNA-KLYISNLDYGVSNQDIKELFSEVGELKSS 198
SF+RTKG IW++ L +DS+ KLYISNLDYGVSN+DI+ELFSEVG+LK
Sbjct: 31 SFSRTKGMIWRHDLFDDSIVAAGISGIETGTKLYISNLDYGVSNEDIRELFSEVGDLKRY 90
Query: 199 SVHYDRNGRSNGTAEVVFARQNDAVAAMRRYNGVQLDGKPMKIELIGPTIALPVS-RIGV 375
+VHYDRNG +G+AEVV+ R++DA+AA++RYN VQLDGKPMKIE+IG + LPV+ R+ V
Sbjct: 91 AVHYDRNGHPSGSAEVVYTRRSDAMAALKRYNNVQLDGKPMKIEVIGTNLGLPVTPRVNV 150
Query: 376 PAATLGRGQRPMLPINQ-------------GILR---PRGVGRGSQGGASFGQRRNRLGT 507
GRG+R ++ Q GI R RG GRG S G+ R
Sbjct: 151 VGGPNGRGKRTVVMTPQFGRGASSSFNRASGITRGGFQRGRGRGHLNAISSGRGSGRGHL 210
Query: 508 SA-XXXXXXXXXXXXXXXXXXXXNQDPARSAEDLDKDLENYHAQAMETS 651
+A Q+ +SA++LDK+LE YH++AM TS
Sbjct: 211 NAISSGRGIGRGRASGRGRGRGRKQNLEKSADELDKELETYHSEAMNTS 259
>XP_009387818.1 PREDICTED: THO complex subunit 4D-like isoform X1 [Musa acuminata
subsp. malaccensis]
Length = 296
Score = 173 bits (439), Expect = 1e-48
Identities = 104/230 (45%), Positives = 138/230 (60%), Gaps = 19/230 (8%)
Frame = +1
Query: 19 QSFNRTKGAIWQNGLLEDSLXXXXXXXXXNA-KLYISNLDYGVSNQDIKELFSEVGELKS 195
+SF+RTKG IW++ L +DS+ KLYISNLDYGVSN+DI+ELFSEVG+LK
Sbjct: 67 KSFSRTKGMIWRHDLFDDSIVAAGISGIETGTKLYISNLDYGVSNEDIRELFSEVGDLKR 126
Query: 196 SSVHYDRNGRSNGTAEVVFARQNDAVAAMRRYNGVQLDGKPMKIELIGPTIALPVS-RIG 372
+VHYDRNG +G+AEVV+ R++DA+AA++RYN VQLDGKPMKIE+IG + LPV+ R+
Sbjct: 127 YAVHYDRNGHPSGSAEVVYTRRSDAMAALKRYNNVQLDGKPMKIEVIGTNLGLPVTPRVN 186
Query: 373 VPAATLGRGQRPMLPINQ-------------GILR---PRGVGRGSQGGASFGQRRNRLG 504
V GRG+R ++ Q GI R RG GRG S G+ R
Sbjct: 187 VVGGPNGRGKRTVVMTPQFGRGASSSFNRASGITRGGFQRGRGRGHLNAISSGRGSGRGH 246
Query: 505 TSA-XXXXXXXXXXXXXXXXXXXXNQDPARSAEDLDKDLENYHAQAMETS 651
+A Q+ +SA++LDK+LE YH++AM TS
Sbjct: 247 LNAISSGRGIGRGRASGRGRGRGRKQNLEKSADELDKELETYHSEAMNTS 296
>AQK52402.1 THO complex subunit 4C [Zea mays]
Length = 223
Score = 165 bits (417), Expect = 3e-46
Identities = 99/224 (44%), Positives = 131/224 (58%), Gaps = 9/224 (4%)
Frame = +1
Query: 4 LFPNLQSFNRTKGAIWQNGLLEDSLXXXXXXXXXNAKLYISNLDYGVSNQDIKELFSEVG 183
+F QSF+RTK W+ L DS+ KLYISNLDYGVSN+DIKELFSEVG
Sbjct: 1 MFGIFQSFSRTKDMTWRPDLFSDSMAASGIET--GTKLYISNLDYGVSNEDIKELFSEVG 58
Query: 184 ELKSSSVHYDRNGRSNGTAEVVFARQNDAVAAMRRYNGVQLDGKPMKIELIGPTIALPVS 363
LK +VHYD GR NGTAEVVF R++DA+AA++RYN V LDGK MKIE+IG + LP++
Sbjct: 59 HLKRFAVHYDGYGRPNGTAEVVFTRRSDAIAALKRYNNVLLDGKAMKIEVIGNDLGLPMT 118
Query: 364 -RIGVPAATLGRGQRPMLPINQGILRPRGVGR-------GSQGGASFGQRRNRLGT-SAX 516
RI V A+ GR R ++ + R RG ++GG G+ R + +
Sbjct: 119 PRINVVGASNGRATRTVVMTPEFSQRGRGSSSRPLSNRFNNRGGFQAGRGRGQFQSWGRG 178
Query: 517 XXXXXXXXXXXXXXXXXXXNQDPARSAEDLDKDLENYHAQAMET 648
+ P ++A++LDKDLE+YHA+AM+T
Sbjct: 179 RGQFQSRGRGRAQFQGRGRGRKPEKTADELDKDLESYHAEAMKT 222
>EOY07572.1 RNA-binding family protein [Theobroma cacao]
Length = 240
Score = 165 bits (417), Expect = 4e-46
Identities = 94/179 (52%), Positives = 109/179 (60%)
Frame = +1
Query: 112 KLYISNLDYGVSNQDIKELFSEVGELKSSSVHYDRNGRSNGTAEVVFARQNDAVAAMRRY 291
KLYISNLDYGVSN+DIKELFSEVG++K SVHYDR+GRS GTAEVVF+R+ DA A +RY
Sbjct: 87 KLYISNLDYGVSNEDIKELFSEVGDMKRYSVHYDRSGRSKGTAEVVFSRRTDAAVAFKRY 146
Query: 292 NGVQLDGKPMKIELIGPTIALPVSRIGVPAATLGRGQRPMLPINQGILRPRGVGRGSQGG 471
NGVQLDGKPMKIE++G +A PV+ +P AT G+ P GV R QG
Sbjct: 147 NGVQLDGKPMKIEIVGTNVATPVA---LPPATNGK-----------FANPNGVPRSGQGR 192
Query: 472 ASFGQRRNRLGTSAXXXXXXXXXXXXXXXXXXXXNQDPARSAEDLDKDLENYHAQAMET 648
SF R G A Q SAEDLD DLENYH +AM+T
Sbjct: 193 GSFSGRSRGPGRGA------------RRGRGQGRGQGEKVSAEDLDADLENYHKEAMQT 239
>XP_006826913.1 PREDICTED: THO complex subunit 4D [Amborella trichopoda] ERM94150.1
hypothetical protein AMTR_s00010p00163740 [Amborella
trichopoda]
Length = 269
Score = 166 bits (419), Expect = 5e-46
Identities = 94/209 (44%), Positives = 129/209 (61%), Gaps = 2/209 (0%)
Frame = +1
Query: 19 QSFNRTKGAIWQNGLLEDSLXXXXXXXXXNA-KLYISNLDYGVSNQDIKELFSEVGELKS 195
+SF+RTK IWQ+ + EDS+ + KLYISNLDYGVSN+DI+ELFSE+G +K
Sbjct: 63 KSFSRTKDMIWQHDMFEDSMIAAGLTGIESGTKLYISNLDYGVSNEDIRELFSEIGPIKR 122
Query: 196 SSVHYDRNGRSNGTAEVVFARQNDAVAAMRRYNGVQLDGKPMKIELIGPTIALPVS-RIG 372
+VHYDR+GRS+G+AEVVF ++++A+AA++RYN VQLDGKPMKIELIG + +PVS R+
Sbjct: 123 CAVHYDRSGRSSGSAEVVFTKRSNALAAVKRYNNVQLDGKPMKIELIGTNLGMPVSARVN 182
Query: 373 VPAATLGRGQRPMLPINQGILRPRGVGRGSQGGASFGQRRNRLGTSAXXXXXXXXXXXXX 552
V GRG+R ++ + P V G G +G+ R
Sbjct: 183 VTGGA-GRGRRTVVMTPEFGPMPGVVSGGH--GTRWGRGRGGFRRGGRGGRGRGVGGRGR 239
Query: 553 XXXXXXXNQDPARSAEDLDKDLENYHAQA 639
P +SA++LDK+LE+YHA A
Sbjct: 240 GRGRGRNQAPPPKSADELDKELESYHANA 268
>XP_019185424.1 PREDICTED: THO complex subunit 4D [Ipomoea nil]
Length = 271
Score = 166 bits (419), Expect = 5e-46
Identities = 98/227 (43%), Positives = 131/227 (57%), Gaps = 17/227 (7%)
Frame = +1
Query: 19 QSFNRTKGAIWQNGLLEDSLXXXXXXXXXNA--KLYISNLDYGVSNQDIKELFSEVGELK 192
+SF RTK WQNGL EDSL + KLY+SNLD GV+N+DI+ELFSE+GEL
Sbjct: 65 KSFRRTKNLPWQNGLFEDSLRAAGLSSGLESGSKLYVSNLDVGVTNEDIRELFSEIGELI 124
Query: 193 SSSVHYDRNGRSNGTAEVVFARQNDAVAAMRRYNGVQLDGKPMKIELIGPTIALP-VSRI 369
++HYD+NGR +G+AEVVFAR+ DA A++RYN VQLDG+PMKIE++G +P ++R+
Sbjct: 125 RYAIHYDKNGRPSGSAEVVFARRTDAFQALKRYNNVQLDGRPMKIEIVGTNSQIPMLARV 184
Query: 370 GVPAATLGR-------GQRPMLPINQGIL-------RPRGVGRGSQGGASFGQRRNRLGT 507
V T GR GQ P + G+ RG G +GG G+ R R G
Sbjct: 185 NVVGGTNGRRTVIMNAGQGPARTRSGGVTPAANWGSGQRGRGTRGRGGRGRGRGRGRGGQ 244
Query: 508 SAXXXXXXXXXXXXXXXXXXXXNQDPARSAEDLDKDLENYHAQAMET 648
+ +SA+DLDK+L+NYHA+AM+T
Sbjct: 245 G--------------------RKKPVEKSADDLDKELDNYHAEAMQT 271
>XP_007027070.2 PREDICTED: THO complex subunit 4B [Theobroma cacao]
Length = 240
Score = 163 bits (413), Expect = 2e-45
Identities = 93/179 (51%), Positives = 108/179 (60%)
Frame = +1
Query: 112 KLYISNLDYGVSNQDIKELFSEVGELKSSSVHYDRNGRSNGTAEVVFARQNDAVAAMRRY 291
KLYISNLDYGVSN+DIKELFSEVG++K SVHYDR+GRS GTAEVVF+R+ DA A +RY
Sbjct: 87 KLYISNLDYGVSNEDIKELFSEVGDMKRYSVHYDRSGRSKGTAEVVFSRRTDAAVAFKRY 146
Query: 292 NGVQLDGKPMKIELIGPTIALPVSRIGVPAATLGRGQRPMLPINQGILRPRGVGRGSQGG 471
NGVQLDGKPMKIE++G +A PV+ +P AT G+ P GV R QG
Sbjct: 147 NGVQLDGKPMKIEIVGTNVATPVA---LPLATNGK-----------FANPNGVPRSGQGR 192
Query: 472 ASFGQRRNRLGTSAXXXXXXXXXXXXXXXXXXXXNQDPARSAEDLDKDLENYHAQAMET 648
F R G A Q SAEDLD DLENYH +AM+T
Sbjct: 193 GGFSGRSRGPGRGA------------RRGRGQGRGQGEKVSAEDLDADLENYHKEAMQT 239
>JAT56277.1 RNA and export factor-binding protein 2 [Anthurium amnicola]
Length = 273
Score = 164 bits (415), Expect = 2e-45
Identities = 96/219 (43%), Positives = 134/219 (61%), Gaps = 5/219 (2%)
Frame = +1
Query: 7 FPNLQSFNRTKGAIWQNGLLEDSLXXXXXXXXXNA-KLYISNLDYGVSNQDIKELFSEVG 183
+ +SF+RTK IW++ L DS+ KLY+SNLDYGVSN+DIKELFSE+G
Sbjct: 61 YKTAKSFSRTKDMIWRHDLFNDSMAAVGLTGVETGTKLYVSNLDYGVSNEDIKELFSEIG 120
Query: 184 ELKSSSVHYDRNGRSNGTAEVVFARQNDAVAAMRRYNGVQLDGKPMKIELIGPTIALPVS 363
ELK S++HYD+NGR +G+AEV+F R++DA+AA++RYN VQLDGK MKIE+IG +LPVS
Sbjct: 121 ELKRSALHYDKNGRPSGSAEVIFVRRSDALAALKRYNNVQLDGKAMKIEIIGADTSLPVS 180
Query: 364 -RIGVPAATLGRGQRPML---PINQGILRPRGVGRGSQGGASFGQRRNRLGTSAXXXXXX 531
R+ V A GRG+R ++ + + L + RG + +F R R G
Sbjct: 181 ARVQVVGAN-GRGRRTVVMTPRLGRAGLANFNIPRGGRVRGAFQPGRGRGGFRGRGRGGG 239
Query: 532 XXXXXXXXXXXXXXNQDPARSAEDLDKDLENYHAQAMET 648
+SA++LD++LE+YHA+AM T
Sbjct: 240 QGGRGRCRKLIV------EKSADELDRELESYHAEAMNT 272
>XP_015649901.1 PREDICTED: THO complex subunit 4D isoform X2 [Oryza sativa Japonica
Group]
Length = 267
Score = 163 bits (412), Expect = 5e-45
Identities = 99/215 (46%), Positives = 129/215 (60%), Gaps = 5/215 (2%)
Frame = +1
Query: 19 QSFNRTKGAIWQNGLLEDSLXXXXXXXXXNAKLYISNLDYGVSNQDIKELFSEVGELKSS 198
+SF+RTK W+ L DS+ KLYISNLDYGVSN+DIKELFSEVG LK
Sbjct: 62 KSFSRTKDMTWRPDLFSDSMAASGIET--GTKLYISNLDYGVSNEDIKELFSEVGHLKRF 119
Query: 199 SVHYDRNGRSNGTAEVVFARQNDAVAAMRRYNGVQLDGKPMKIELIGPTIALPVS-RIGV 375
+VH+D GR NGTAEVVF R++DA+AA++RYN V LDGK MKIE+IG + LP++ RI V
Sbjct: 120 AVHFDGYGRPNGTAEVVFTRRSDAIAALKRYNNVLLDGKAMKIEVIGSDLGLPMTPRINV 179
Query: 376 PAATLGRGQRPMLPINQ----GILRPRGVGRGSQGGASFGQRRNRLGTSAXXXXXXXXXX 543
A+ GR R ++ N+ RG GRG +G A F + GT +
Sbjct: 180 VGASNGRPTRTVVMTNRYNRGAFQAGRGRGRG-RGRAPFQSQFQGRGTGS-------VRG 231
Query: 544 XXXXXXXXXXNQDPARSAEDLDKDLENYHAQAMET 648
+ ++A++LDKDLE YHA+AM+T
Sbjct: 232 RGQFQGRGRGRRQAGKTADELDKDLETYHAEAMKT 266
>XP_016572542.1 PREDICTED: THO complex subunit 4D isoform X2 [Capsicum annuum]
Length = 211
Score = 160 bits (406), Expect = 8e-45
Identities = 96/225 (42%), Positives = 126/225 (56%), Gaps = 19/225 (8%)
Frame = +1
Query: 22 SFNRTKGAIWQNGLLEDSLXXXXXXXXXNA--KLYISNLDYGVSNQDIKELFSEVGELKS 195
+F RTK WQNGL EDSL + KLY+SNLD GV+N+DI+ELF+E+GEL
Sbjct: 2 TFRRTKNLPWQNGLFEDSLRAAGLSSVLESGTKLYVSNLDTGVTNEDIRELFTEIGELVR 61
Query: 196 SSVHYDRNGRSNGTAEVVFARQNDAVAAMRRYNGVQLDGKPMKIELIGPTIALPV-SRIG 372
++H+D+NGR +G AEVVFAR++DA A++RYN VQLDGKPMKIE++G +P+ +R+
Sbjct: 62 FAIHFDKNGRPSGAAEVVFARRSDAFQALKRYNNVQLDGKPMKIEIVGSNPEIPLAARVN 121
Query: 373 VPAATLGRGQRPMLPINQGILRPRGVGRGSQ----------------GGASFGQRRNRLG 504
V T R M P R +GRGS GG +G+ R R G
Sbjct: 122 VVGGTNRRRTVVMAPGGPARGRGGAIGRGSSQRGRGGLRNAPGRGRGGGRGWGRGRGRGG 181
Query: 505 TSAXXXXXXXXXXXXXXXXXXXXNQDPARSAEDLDKDLENYHAQA 639
+ N+ +SAEDLDK+LENYHA A
Sbjct: 182 RGS--------------------NRGADKSAEDLDKELENYHANA 206
>KMZ69218.1 putative RNA and export factor binding protein [Zostera marina]
Length = 307
Score = 163 bits (413), Expect = 1e-44
Identities = 108/247 (43%), Positives = 142/247 (57%), Gaps = 32/247 (12%)
Frame = +1
Query: 7 FPNLQSFNRTKGAIWQNGLLEDSLXXXXXXXXXNA--KLYISNLDYGVSNQDIKELFSEV 180
F +SF+R +G IWQN L DS+ A KLYISNLD+ VSN DIK+LFSE+
Sbjct: 60 FKIAKSFSRARGMIWQNDLFNDSMEAAAGLSSTQAGTKLYISNLDFKVSNDDIKDLFSEI 119
Query: 181 GELKSSSVHYDRNGRSNGTAEVVFARQNDAVAAMRRYNGVQLDGKPMKIELIGPTIALPV 360
GELK S+VHYDRNGR +G+AEV+FAR++DA++A +RYN VQLDGK MKIE+IG LPV
Sbjct: 120 GELKRSTVHYDRNGRPSGSAEVIFARRSDALSAFKRYNNVQLDGKAMKIEIIGENNGLPV 179
Query: 361 -SRIGVPAATLGRGQR--PMLP---------------INQGILRP---RGVGR---GSQG 468
+R+ V + G +R M+P +N+G P RGV + GS+G
Sbjct: 180 TARVNVVGISQGAEKRTVSMMPKLGRAGGGQFNHFPRLNRGRGGPVAGRGVSQTTYGSRG 239
Query: 469 G-ASFGQRRNRLG-----TSAXXXXXXXXXXXXXXXXXXXXNQDPARSAEDLDKDLENYH 630
G AS G+R + G T+ + +SA LDK+LE+YH
Sbjct: 240 GFASRGRRGFQAGRGGNQTNGGGQKRNRGDGQKHTRGGGRGKKSADKSAAQLDKELESYH 299
Query: 631 AQAMETS 651
A+AM TS
Sbjct: 300 AEAMNTS 306
>NP_001146561.1 THO complex subunit 4C [Zea mays] ACL54279.1 unknown [Zea mays]
AQK52403.1 THO complex subunit 4C [Zea mays] AQK52408.1
THO complex subunit 4C [Zea mays]
Length = 269
Score = 162 bits (410), Expect = 1e-44
Identities = 97/219 (44%), Positives = 129/219 (58%), Gaps = 9/219 (4%)
Frame = +1
Query: 19 QSFNRTKGAIWQNGLLEDSLXXXXXXXXXNAKLYISNLDYGVSNQDIKELFSEVGELKSS 198
+SF+RTK W+ L DS+ KLYISNLDYGVSN+DIKELFSEVG LK
Sbjct: 52 KSFSRTKDMTWRPDLFSDSMAASGIET--GTKLYISNLDYGVSNEDIKELFSEVGHLKRF 109
Query: 199 SVHYDRNGRSNGTAEVVFARQNDAVAAMRRYNGVQLDGKPMKIELIGPTIALPVS-RIGV 375
+VHYD GR NGTAEVVF R++DA+AA++RYN V LDGK MKIE+IG + LP++ RI V
Sbjct: 110 AVHYDGYGRPNGTAEVVFTRRSDAIAALKRYNNVLLDGKAMKIEVIGNDLGLPMTPRINV 169
Query: 376 PAATLGRGQRPMLPINQGILRPRGVGR-------GSQGGASFGQRRNRLGT-SAXXXXXX 531
A+ GR R ++ + R RG ++GG G+ R + +
Sbjct: 170 VGASNGRATRTVVMTPEFSQRGRGSSSRPLSNRFNNRGGFQAGRGRGQFQSWGRGRGQFQ 229
Query: 532 XXXXXXXXXXXXXXNQDPARSAEDLDKDLENYHAQAMET 648
+ P ++A++LDKDLE+YHA+AM+T
Sbjct: 230 SRGRGRAQFQGRGRGRKPEKTADELDKDLESYHAEAMKT 268