BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra29_contig00003763
         (660 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_010905498.1 PREDICTED: mediator of RNA polymerase II transcri...    62   1e-08
XP_010026415.1 PREDICTED: mediator of RNA polymerase II transcri...    60   2e-07
XP_010444248.1 PREDICTED: mediator of RNA polymerase II transcri...    59   3e-07
XP_015937869.1 PREDICTED: mediator of RNA polymerase II transcri...    59   3e-07
XP_008807437.1 PREDICTED: mediator of RNA polymerase II transcri...    58   4e-07
JAT43933.1 Mediator of RNA polymerase II transcription subunit 3...    58   4e-07
XP_009150402.1 PREDICTED: mediator of RNA polymerase II transcri...    58   4e-07
XP_013623350.1 PREDICTED: mediator of RNA polymerase II transcri...    58   5e-07
XP_020112005.1 mediator of RNA polymerase II transcription subun...    58   5e-07
XP_015934372.1 PREDICTED: mediator of RNA polymerase II transcri...    58   6e-07
XP_010460524.1 PREDICTED: mediator of RNA polymerase II transcri...    58   7e-07
XP_013642987.1 PREDICTED: mediator of RNA polymerase II transcri...    57   8e-07
KFK28059.1 hypothetical protein AALP_AA8G466400 [Arabis alpina]        57   9e-07
XP_010250683.1 PREDICTED: mediator of RNA polymerase II transcri...    57   1e-06
XP_010484084.1 PREDICTED: mediator of RNA polymerase II transcri...    57   1e-06
XP_018827811.1 PREDICTED: mediator of RNA polymerase II transcri...    57   2e-06
XP_018485632.1 PREDICTED: mediator of RNA polymerase II transcri...    56   2e-06
XP_016462709.1 PREDICTED: mediator of RNA polymerase II transcri...    56   3e-06
XP_009615880.1 PREDICTED: mediator of RNA polymerase II transcri...    56   3e-06
NP_001332538.1 mediator of RNA polymerase II transcription subun...    56   3e-06

>XP_010905498.1 PREDICTED: mediator of RNA polymerase II transcription subunit 30
           isoform X1 [Elaeis guineensis]
          Length = 163

 Score = 62.0 bits (149), Expect = 1e-08
 Identities = 38/96 (39%), Positives = 51/96 (53%)
 Frame = -3

Query: 607 SSNGGGGALEESRLRYKATVTSLRAVISAIASSLQNQSHDDVEMDVDVRHDQDEIHXXXX 428
           +  GGGGAL+E+RLRYK+ + +LRAVI+A+ SS Q          +D + D  EI     
Sbjct: 71  AGGGGGGALDEARLRYKSAIANLRAVIAAVPSSPQETG------ALDAKADPAEIERLEE 124

Query: 427 XXXXXXXEVKKKNQHLKVXXXXXXXXXXXISMWQSP 320
                  E++ KN+HLK            ISMWQSP
Sbjct: 125 RVSALRKELENKNKHLKHLIDQLRNLITDISMWQSP 160


>XP_010026415.1 PREDICTED: mediator of RNA polymerase II transcription subunit 30
           [Eucalyptus grandis]
          Length = 193

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 39/96 (40%), Positives = 54/96 (56%), Gaps = 3/96 (3%)
 Frame = -3

Query: 598 GGGGALEESRLRYKATVTSLRAVISAIASSLQNQSHD---DVEMDVDVRHDQDEIHXXXX 428
           GGGGAL+E+RLRYK++V SLRAV++AI SS + +S D    +   +    DQ E+     
Sbjct: 96  GGGGALDEARLRYKSSVASLRAVLTAIPSSHKAKSFDPGASISSSIPF-VDQVEVERLEE 154

Query: 427 XXXXXXXEVKKKNQHLKVXXXXXXXXXXXISMWQSP 320
                  E+ +KN+HLK+           IS WQSP
Sbjct: 155 QASNLKKELVEKNKHLKLLIDQLRELIADISTWQSP 190


>XP_010444248.1 PREDICTED: mediator of RNA polymerase II transcription subunit 30
           [Camelina sativa]
          Length = 183

 Score = 58.9 bits (141), Expect = 3e-07
 Identities = 40/103 (38%), Positives = 52/103 (50%), Gaps = 4/103 (3%)
 Frame = -3

Query: 616 HDMSSNGGGG----ALEESRLRYKATVTSLRAVISAIASSLQNQSHDDVEMDVDVRHDQD 449
           H   S GGGG    AL+E+ LRYK +VTSLRAV++AI +S Q     ++E  +     +D
Sbjct: 79  HHSESGGGGGSGNSALDEASLRYKNSVTSLRAVLTAIPNS-QKAKASEMENGLGSPESED 137

Query: 448 EIHXXXXXXXXXXXEVKKKNQHLKVXXXXXXXXXXXISMWQSP 320
           EI            E+ KKN H+K            IS WQSP
Sbjct: 138 EIENLEEQALSLRKEIAKKNVHVKELIDKFRELIADISTWQSP 180


>XP_015937869.1 PREDICTED: mediator of RNA polymerase II transcription subunit 30
           [Arachis duranensis] XP_015937870.1 PREDICTED: mediator
           of RNA polymerase II transcription subunit 30 [Arachis
           duranensis] XP_015937871.1 PREDICTED: mediator of RNA
           polymerase II transcription subunit 30 [Arachis
           duranensis] XP_015937872.1 PREDICTED: mediator of RNA
           polymerase II transcription subunit 30 [Arachis
           duranensis] XP_015937873.1 PREDICTED: mediator of RNA
           polymerase II transcription subunit 30 [Arachis
           duranensis] XP_016163294.1 PREDICTED: mediator of RNA
           polymerase II transcription subunit 30-like [Arachis
           ipaensis] XP_016163295.1 PREDICTED: mediator of RNA
           polymerase II transcription subunit 30-like [Arachis
           ipaensis] XP_016163296.1 PREDICTED: mediator of RNA
           polymerase II transcription subunit 30-like [Arachis
           ipaensis] XP_016171952.1 PREDICTED: mediator of RNA
           polymerase II transcription subunit 30 [Arachis
           ipaensis] XP_016171953.1 PREDICTED: mediator of RNA
           polymerase II transcription subunit 30 [Arachis
           ipaensis] XP_016171954.1 PREDICTED: mediator of RNA
           polymerase II transcription subunit 30 [Arachis
           ipaensis] XP_016171955.1 PREDICTED: mediator of RNA
           polymerase II transcription subunit 30 [Arachis
           ipaensis]
          Length = 201

 Score = 58.9 bits (141), Expect = 3e-07
 Identities = 36/93 (38%), Positives = 45/93 (48%)
 Frame = -3

Query: 598 GGGGALEESRLRYKATVTSLRAVISAIASSLQNQSHDDVEMDVDVRHDQDEIHXXXXXXX 419
           G GGALEE+R RYK  + SLR V+ AI +S + +S D    D  +  D  EI        
Sbjct: 106 GAGGALEEARFRYKNAIASLRNVLEAIPNSQKAKSFDTGSTDSPMELDDMEIEKLEERAS 165

Query: 418 XXXXEVKKKNQHLKVXXXXXXXXXXXISMWQSP 320
               E+  KN HLK+           IS WQSP
Sbjct: 166 SLRKELANKNMHLKILIDQLRDLLSDISTWQSP 198


>XP_008807437.1 PREDICTED: mediator of RNA polymerase II transcription subunit 30
           [Phoenix dactylifera]
          Length = 164

 Score = 58.2 bits (139), Expect = 4e-07
 Identities = 37/93 (39%), Positives = 50/93 (53%)
 Frame = -3

Query: 598 GGGGALEESRLRYKATVTSLRAVISAIASSLQNQSHDDVEMDVDVRHDQDEIHXXXXXXX 419
           GGGGAL+E+RLRYK+ + +LRAVI+AI SS Q          ++ + D  EI        
Sbjct: 75  GGGGALDEARLRYKSAIANLRAVIAAIPSSPQETG------ALEAKADPAEIQRLEERVS 128

Query: 418 XXXXEVKKKNQHLKVXXXXXXXXXXXISMWQSP 320
               E++ KN++LK            ISMWQSP
Sbjct: 129 DLRKELENKNKYLKHLIDQLRSLITDISMWQSP 161


>JAT43933.1 Mediator of RNA polymerase II transcription subunit 30 [Anthurium
           amnicola]
          Length = 171

 Score = 58.2 bits (139), Expect = 4e-07
 Identities = 35/99 (35%), Positives = 50/99 (50%)
 Frame = -3

Query: 616 HDMSSNGGGGALEESRLRYKATVTSLRAVISAIASSLQNQSHDDVEMDVDVRHDQDEIHX 437
           HD    GGGGAL+++RLRYK+ ++SLRAV++AI +     S        + R DQD++  
Sbjct: 73  HDAGPGGGGGALDDARLRYKSAISSLRAVLAAIPTCQVGGSGVSAS---EARVDQDDLER 129

Query: 436 XXXXXXXXXXEVKKKNQHLKVXXXXXXXXXXXISMWQSP 320
                     E+  KN+ LK            +S WQSP
Sbjct: 130 LEKRASALRKELASKNKQLKDLIDQLRELITDLSTWQSP 168


>XP_009150402.1 PREDICTED: mediator of RNA polymerase II transcription subunit 30
           [Brassica rapa]
          Length = 175

 Score = 58.2 bits (139), Expect = 4e-07
 Identities = 40/105 (38%), Positives = 52/105 (49%), Gaps = 6/105 (5%)
 Frame = -3

Query: 616 HDMSSNGGGG------ALEESRLRYKATVTSLRAVISAIASSLQNQSHDDVEMDVDVRHD 455
           H  S  GGGG      AL+E+ LRYK +VTSLRAVI+AI +S Q     + E  +    +
Sbjct: 69  HSESGGGGGGGGSGNSALDEASLRYKNSVTSLRAVIAAIPNS-QKAKVSETENGLGTPEE 127

Query: 454 QDEIHXXXXXXXXXXXEVKKKNQHLKVXXXXXXXXXXXISMWQSP 320
           +DEI            E+ +KN H+K            IS WQSP
Sbjct: 128 EDEIEKLEEQSLSLRKEIAEKNVHVKELIDKFRQLIADISTWQSP 172


>XP_013623350.1 PREDICTED: mediator of RNA polymerase II transcription subunit 30
           [Brassica oleracea var. oleracea] XP_013643589.1
           PREDICTED: mediator of RNA polymerase II transcription
           subunit 30-like [Brassica napus] CDX84420.1
           BnaC03g50800D [Brassica napus]
          Length = 176

 Score = 58.2 bits (139), Expect = 5e-07
 Identities = 40/105 (38%), Positives = 52/105 (49%), Gaps = 6/105 (5%)
 Frame = -3

Query: 616 HDMSSNGGGG------ALEESRLRYKATVTSLRAVISAIASSLQNQSHDDVEMDVDVRHD 455
           H  S  GGGG      AL+E+ LRYK +VTSLRAVI+AI +S Q     + E  +    +
Sbjct: 70  HSESGGGGGGGGSGNSALDEASLRYKNSVTSLRAVIAAIPNS-QKAKVSEAENGLGTPEE 128

Query: 454 QDEIHXXXXXXXXXXXEVKKKNQHLKVXXXXXXXXXXXISMWQSP 320
           +DEI            E+ +KN H+K            IS WQSP
Sbjct: 129 EDEIEKLEEKALSLRKEIAEKNVHVKELIDKFRQLIADISTWQSP 173


>XP_020112005.1 mediator of RNA polymerase II transcription subunit 30 [Ananas
           comosus]
          Length = 180

 Score = 58.2 bits (139), Expect = 5e-07
 Identities = 37/96 (38%), Positives = 52/96 (54%)
 Frame = -3

Query: 607 SSNGGGGALEESRLRYKATVTSLRAVISAIASSLQNQSHDDVEMDVDVRHDQDEIHXXXX 428
           S  G GGAL+++R RYK+ V +LRA I+AI++S Q  S       ++ + DQ EI     
Sbjct: 88  SGGGSGGALDDARHRYKSAVAALRASIAAISASTQEVS------TLEPKADQVEIERLEE 141

Query: 427 XXXXXXXEVKKKNQHLKVXXXXXXXXXXXISMWQSP 320
                  E++ KN+HLK+           ISMWQSP
Sbjct: 142 RASALRKEIEIKNRHLKLLIDQLRNLIADISMWQSP 177


>XP_015934372.1 PREDICTED: mediator of RNA polymerase II transcription subunit
           30-like [Arachis duranensis] XP_015934373.1 PREDICTED:
           mediator of RNA polymerase II transcription subunit
           30-like [Arachis duranensis] XP_015934374.1 PREDICTED:
           mediator of RNA polymerase II transcription subunit
           30-like [Arachis duranensis]
          Length = 201

 Score = 58.2 bits (139), Expect = 6e-07
 Identities = 35/93 (37%), Positives = 45/93 (48%)
 Frame = -3

Query: 598 GGGGALEESRLRYKATVTSLRAVISAIASSLQNQSHDDVEMDVDVRHDQDEIHXXXXXXX 419
           G GGALEE+R RYK  + SLR V+ AI +S + +S D    D  +  D  E+        
Sbjct: 106 GAGGALEEARFRYKNAIASLRNVLEAIPNSQKAKSFDTGSTDSPMELDDMELEKLEERAS 165

Query: 418 XXXXEVKKKNQHLKVXXXXXXXXXXXISMWQSP 320
               E+  KN HLK+           IS WQSP
Sbjct: 166 SLRKELANKNMHLKILIDQLRDLLSDISTWQSP 198


>XP_010460524.1 PREDICTED: mediator of RNA polymerase II transcription subunit
           30-like [Camelina sativa]
          Length = 188

 Score = 57.8 bits (138), Expect = 7e-07
 Identities = 40/105 (38%), Positives = 51/105 (48%), Gaps = 6/105 (5%)
 Frame = -3

Query: 616 HDMSSNGGGG------ALEESRLRYKATVTSLRAVISAIASSLQNQSHDDVEMDVDVRHD 455
           H  S  GGGG      AL+E+ LRYK +VTSLRAV++AI +S Q     + E  +     
Sbjct: 82  HSESGGGGGGGGSGNSALDEASLRYKNSVTSLRAVLTAIPNS-QKAKASETENGLGSPES 140

Query: 454 QDEIHXXXXXXXXXXXEVKKKNQHLKVXXXXXXXXXXXISMWQSP 320
           +DEI            E+ KKN H+K            IS WQSP
Sbjct: 141 EDEIENLEEQALSLRKEIAKKNVHVKELIDKFRELIADISTWQSP 185


>XP_013642987.1 PREDICTED: mediator of RNA polymerase II transcription subunit 30
           [Brassica napus] CDY66667.1 BnaAnng22690D [Brassica
           napus]
          Length = 175

 Score = 57.4 bits (137), Expect = 8e-07
 Identities = 39/105 (37%), Positives = 52/105 (49%), Gaps = 6/105 (5%)
 Frame = -3

Query: 616 HDMSSNGGGG------ALEESRLRYKATVTSLRAVISAIASSLQNQSHDDVEMDVDVRHD 455
           H  S  GGGG      AL+E+ LRYK +VTSLRAV++AI +S Q     + E  +    +
Sbjct: 69  HSESGGGGGGGGSGNSALDEASLRYKNSVTSLRAVLAAIPNS-QKAKVSETENGLGTPEE 127

Query: 454 QDEIHXXXXXXXXXXXEVKKKNQHLKVXXXXXXXXXXXISMWQSP 320
           +DEI            E+ +KN H+K            IS WQSP
Sbjct: 128 EDEIEKLEEQSLSLRKEIAEKNVHVKELIDKFRQLIADISTWQSP 172


>KFK28059.1 hypothetical protein AALP_AA8G466400 [Arabis alpina]
          Length = 179

 Score = 57.4 bits (137), Expect = 9e-07
 Identities = 38/103 (36%), Positives = 53/103 (51%), Gaps = 4/103 (3%)
 Frame = -3

Query: 616 HDMSSNGGGG----ALEESRLRYKATVTSLRAVISAIASSLQNQSHDDVEMDVDVRHDQD 449
           H  S  GGGG    AL+E+ LRYK ++TSLR+V++AI +S Q     ++E  V+    ++
Sbjct: 75  HSDSGGGGGGSGNSALDEAGLRYKNSMTSLRSVLAAIPNS-QKAKASEMENGVETPESEE 133

Query: 448 EIHXXXXXXXXXXXEVKKKNQHLKVXXXXXXXXXXXISMWQSP 320
           EI            E+ KKN H+K            IS WQSP
Sbjct: 134 EIEKLEEQALSLRKEIAKKNVHVKELIDKFRELIADISTWQSP 176


>XP_010250683.1 PREDICTED: mediator of RNA polymerase II transcription subunit
           30-like isoform X2 [Nelumbo nucifera]
          Length = 165

 Score = 56.6 bits (135), Expect = 1e-06
 Identities = 35/97 (36%), Positives = 52/97 (53%), Gaps = 2/97 (2%)
 Frame = -3

Query: 604 SNGGGGALEESRLRYKATVTSLRAVISAIASSLQNQSHDD--VEMDVDVRHDQDEIHXXX 431
           S  G GALEE+RLRYK+++ SLR++ISAI +S + ++++        +   DQ EI    
Sbjct: 66  SEMGSGALEEARLRYKSSIASLRSIISAIPNSRKAKAYEAGFTNGSSESHADQAEIEKLE 125

Query: 430 XXXXXXXXEVKKKNQHLKVXXXXXXXXXXXISMWQSP 320
                   EV  K++HLK+           +S WQSP
Sbjct: 126 EKATSLRKEVANKHKHLKILIDQLRNIITDVSTWQSP 162


>XP_010484084.1 PREDICTED: mediator of RNA polymerase II transcription subunit 30
           [Camelina sativa] XP_010484085.1 PREDICTED: mediator of
           RNA polymerase II transcription subunit 30 [Camelina
           sativa]
          Length = 187

 Score = 57.0 bits (136), Expect = 1e-06
 Identities = 39/103 (37%), Positives = 52/103 (50%), Gaps = 4/103 (3%)
 Frame = -3

Query: 616 HDMSSNGGGG----ALEESRLRYKATVTSLRAVISAIASSLQNQSHDDVEMDVDVRHDQD 449
           H  S  GGGG    AL+E+ LRYK +VTSLRAV++AI +S Q     ++E  +     ++
Sbjct: 83  HSESGGGGGGSGNSALDEASLRYKNSVTSLRAVLTAIPNS-QKAKTSEMENGLGSPESEN 141

Query: 448 EIHXXXXXXXXXXXEVKKKNQHLKVXXXXXXXXXXXISMWQSP 320
           EI            E+ KKN H+K            IS WQSP
Sbjct: 142 EIENLEEQALSLRKEIAKKNVHVKELIDKFRELIADISTWQSP 184


>XP_018827811.1 PREDICTED: mediator of RNA polymerase II transcription subunit
           30-like isoform X1 [Juglans regia]
          Length = 199

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 38/101 (37%), Positives = 51/101 (50%), Gaps = 2/101 (1%)
 Frame = -3

Query: 616 HDMSSNGGGGALEESRLRYKATVTSLRAVISAIASSLQNQSHD--DVEMDVDVRHDQDEI 443
           H  S  G GGALEE+R RYK++V SLRAV++AI +S + +S +             QDEI
Sbjct: 96  HAESGGGSGGALEEARFRYKSSVNSLRAVLAAIPNSEKAKSFELGSTPSGPLSPAGQDEI 155

Query: 442 HXXXXXXXXXXXEVKKKNQHLKVXXXXXXXXXXXISMWQSP 320
                       E+  KN++LKV           +S WQSP
Sbjct: 156 EKLEERASGLRKELASKNRYLKVLIDQLRDLITDVSTWQSP 196


>XP_018485632.1 PREDICTED: mediator of RNA polymerase II transcription subunit 30
           [Raphanus sativus]
          Length = 182

 Score = 56.2 bits (134), Expect = 2e-06
 Identities = 39/108 (36%), Positives = 54/108 (50%), Gaps = 9/108 (8%)
 Frame = -3

Query: 616 HDMSSNGGGG--------ALEESRLRYKATVTSLRAVISAIASSLQNQ-SHDDVEMDVDV 464
           H  S  GGGG        AL+E+ LRYK +VTSLRAV++AI +S + + S  +  ++   
Sbjct: 72  HSESGGGGGGGGGGSGNSALDEASLRYKNSVTSLRAVLTAILNSHKAKVSETENGLETPE 131

Query: 463 RHDQDEIHXXXXXXXXXXXEVKKKNQHLKVXXXXXXXXXXXISMWQSP 320
             D+DEI            E+ +KN H+K            IS WQSP
Sbjct: 132 EEDEDEIEKLEEQALSLRKEIAEKNVHVKELIDKFRQLIADISTWQSP 179


>XP_016462709.1 PREDICTED: mediator of RNA polymerase II transcription subunit
           30-like [Nicotiana tabacum]
          Length = 191

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 35/93 (37%), Positives = 51/93 (54%), Gaps = 1/93 (1%)
 Frame = -3

Query: 595 GGGALEESRLRYKATVTSLRAVISAIASSLQNQSHDDVEMDVDV-RHDQDEIHXXXXXXX 419
           GGGAL+ESRLRYK +V SLR+V++AI++S + ++ +       +   DQ EI        
Sbjct: 96  GGGALDESRLRYKLSVASLRSVLTAISNSQKAKALEAASASGSLSAADQSEIEQLEDRAS 155

Query: 418 XXXXEVKKKNQHLKVXXXXXXXXXXXISMWQSP 320
               E+  KN+HLK+           +S WQSP
Sbjct: 156 TLKKELVDKNKHLKLLIDQFRDLLSDLSTWQSP 188


>XP_009615880.1 PREDICTED: mediator of RNA polymerase II transcription subunit 30
           [Nicotiana tomentosiformis]
          Length = 191

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 35/93 (37%), Positives = 51/93 (54%), Gaps = 1/93 (1%)
 Frame = -3

Query: 595 GGGALEESRLRYKATVTSLRAVISAIASSLQNQSHDDVEMDVDV-RHDQDEIHXXXXXXX 419
           GGGAL+ESRLRYK +V SLR+V++AI++S + ++ +       +   DQ EI        
Sbjct: 96  GGGALDESRLRYKLSVASLRSVLTAISNSQKAKALEAASASGSLSAADQSEIEQLEDRAS 155

Query: 418 XXXXEVKKKNQHLKVXXXXXXXXXXXISMWQSP 320
               E+  KN+HLK+           +S WQSP
Sbjct: 156 TLKKELVDKNKHLKLLIDQFRDLLSDLSTWQSP 188


>NP_001332538.1 mediator of RNA polymerase II transcription subunit [Arabidopsis
           thaliana] ANM70972.1 mediator of RNA polymerase II
           transcription subunit [Arabidopsis thaliana]
          Length = 178

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 38/105 (36%), Positives = 52/105 (49%), Gaps = 6/105 (5%)
 Frame = -3

Query: 616 HDMSSNGGGGA------LEESRLRYKATVTSLRAVISAIASSLQNQSHDDVEMDVDVRHD 455
           H  S+ GGGG       L+E+ LRYK +VTSLRAV++AI +S Q     +++  +     
Sbjct: 72  HSESAGGGGGGGSGNSVLDEASLRYKNSVTSLRAVLAAIPNS-QKAKASEMQNGLGSPES 130

Query: 454 QDEIHXXXXXXXXXXXEVKKKNQHLKVXXXXXXXXXXXISMWQSP 320
           +DEI            E+ KKN H+K            IS WQSP
Sbjct: 131 EDEIEKLEEQALSLRMEIAKKNVHVKELIDKLRELIADISTWQSP 175