BLASTX nr result
ID: Ephedra29_contig00003751
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra29_contig00003751
(2623 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
YP_009231453.1 RNA polymerase alpha chain (chloroplast) [Ephedra... 516 e-175
YP_002519985.1 RNA polymerase alpha chain (chloroplast) [Ephedra... 514 e-175
BAF64863.1 cytochrome b6 (chloroplast) [Gnetum parvifolium] 435 e-144
YP_002519983.1 cytochrome b6 (chloroplast) [Ephedra equisetina] ... 431 e-143
YP_005352737.1 petB gene product (chloroplast) [Ginkgo biloba] A... 428 e-142
YP_009334037.1 cytochrome b6 (chloroplast) [Merrillia caloxylon]... 429 e-142
YP_009334122.1 cytochrome b6 (chloroplast) [Micromelum minutum] ... 429 e-142
YP_009333696.1 cytochrome b6 (chloroplast) [Murraya koenigii] AO... 429 e-142
YP_009333867.1 cytochrome b6 (chloroplast) [Glycosmis mauritiana... 428 e-141
YP_740506.1 cytochrome b6 (chloroplast) [Citrus sinensis] YP_009... 428 e-141
YP_009176033.1 cytochrome b6 (chloroplast) [Ficus racemosa] ALI3... 427 e-141
XP_010089870.1 Cytochrome b6 [Morus notabilis] EXB38500.1 Cytoch... 427 e-141
YP_009262691.1 cytochrome b6 (chloroplast) [Styrax grandiflorus]... 427 e-141
YP_009259817.1 cytochrome b6 (chloroplast) [Leitneria floridana]... 427 e-141
YP_009144086.1 cytochrome b6 (chloroplast) [Wollemia nobilis] AK... 426 e-141
YP_009333952.1 cytochrome b6 (chloroplast) [Glycosmis pentaphyll... 426 e-141
APX55477.1 cytochrome b6 (chloroplast) [Torreya jackii] 425 e-141
YP_009316812.1 cytochrome b6 (plastid) [Morus cathayana] AOW4370... 425 e-140
YP_009155569.1 cytochrome b6 (chloroplast) [Oryza barthii] YP_00... 425 e-140
AHY32839.1 cytochrome b6 (chloroplast) [Libidibia coriaria] 424 e-140
>YP_009231453.1 RNA polymerase alpha chain (chloroplast) [Ephedra foeminea]
ALV90168.1 RNA polymerase alpha chain (chloroplast)
[Ephedra foeminea]
Length = 258
Score = 516 bits (1329), Expect = e-175
Identities = 258/258 (100%), Positives = 258/258 (100%)
Frame = +3
Query: 423 MIWNELKTAESSPRWKCLESRTDSKRSHYGRFSISPLLKGQANTLAIAIRKTLLQEVKGT 602
MIWNELKTAESSPRWKCLESRTDSKRSHYGRFSISPLLKGQANTLAIAIRKTLLQEVKGT
Sbjct: 1 MIWNELKTAESSPRWKCLESRTDSKRSHYGRFSISPLLKGQANTLAIAIRKTLLQEVKGT 60
Query: 603 YITYARFQKNILHEYSSIIGIKESVHDILMNLKQIVLRSELYGIHEASICTVGPKNVTAQ 782
YITYARFQKNILHEYSSIIGIKESVHDILMNLKQIVLRSELYGIHEASICTVGPKNVTAQ
Sbjct: 61 YITYARFQKNILHEYSSIIGIKESVHDILMNLKQIVLRSELYGIHEASICTVGPKNVTAQ 120
Query: 783 DIILPSSIQIIDDTQHIASLTKRIPFNVTLKIEKKKRYTIENMKQPKDIFFPIDGVSLPV 962
DIILPSSIQIIDDTQHIASLTKRIPFNVTLKIEKKKRYTIENMKQPKDIFFPIDGVSLPV
Sbjct: 121 DIILPSSIQIIDDTQHIASLTKRIPFNVTLKIEKKKRYTIENMKQPKDIFFPIDGVSLPV 180
Query: 963 QNVNFSIHSYKSSDNIQEMLIFEIWTNGGLTPRETIYEACWSLLDLIIPLLCVEQNIKNS 1142
QNVNFSIHSYKSSDNIQEMLIFEIWTNGGLTPRETIYEACWSLLDLIIPLLCVEQNIKNS
Sbjct: 181 QNVNFSIHSYKSSDNIQEMLIFEIWTNGGLTPRETIYEACWSLLDLIIPLLCVEQNIKNS 240
Query: 1143 QKKPNPLSLVTKDRNKKK 1196
QKKPNPLSLVTKDRNKKK
Sbjct: 241 QKKPNPLSLVTKDRNKKK 258
>YP_002519985.1 RNA polymerase alpha chain (chloroplast) [Ephedra equisetina]
BAH11353.1 RNA polymerase alpha chain (chloroplast)
[Ephedra equisetina]
Length = 258
Score = 514 bits (1325), Expect = e-175
Identities = 257/258 (99%), Positives = 257/258 (99%)
Frame = +3
Query: 423 MIWNELKTAESSPRWKCLESRTDSKRSHYGRFSISPLLKGQANTLAIAIRKTLLQEVKGT 602
MIWNELKTAESSPRWKCLESRTDSKRSHYGRFSISPL KGQANTLAIAIRKTLLQEVKGT
Sbjct: 1 MIWNELKTAESSPRWKCLESRTDSKRSHYGRFSISPLFKGQANTLAIAIRKTLLQEVKGT 60
Query: 603 YITYARFQKNILHEYSSIIGIKESVHDILMNLKQIVLRSELYGIHEASICTVGPKNVTAQ 782
YITYARFQKNILHEYSSIIGIKESVHDILMNLKQIVLRSELYGIHEASICTVGPKNVTAQ
Sbjct: 61 YITYARFQKNILHEYSSIIGIKESVHDILMNLKQIVLRSELYGIHEASICTVGPKNVTAQ 120
Query: 783 DIILPSSIQIIDDTQHIASLTKRIPFNVTLKIEKKKRYTIENMKQPKDIFFPIDGVSLPV 962
DIILPSSIQIIDDTQHIASLTKRIPFNVTLKIEKKKRYTIENMKQPKDIFFPIDGVSLPV
Sbjct: 121 DIILPSSIQIIDDTQHIASLTKRIPFNVTLKIEKKKRYTIENMKQPKDIFFPIDGVSLPV 180
Query: 963 QNVNFSIHSYKSSDNIQEMLIFEIWTNGGLTPRETIYEACWSLLDLIIPLLCVEQNIKNS 1142
QNVNFSIHSYKSSDNIQEMLIFEIWTNGGLTPRETIYEACWSLLDLIIPLLCVEQNIKNS
Sbjct: 181 QNVNFSIHSYKSSDNIQEMLIFEIWTNGGLTPRETIYEACWSLLDLIIPLLCVEQNIKNS 240
Query: 1143 QKKPNPLSLVTKDRNKKK 1196
QKKPNPLSLVTKDRNKKK
Sbjct: 241 QKKPNPLSLVTKDRNKKK 258
>BAF64863.1 cytochrome b6 (chloroplast) [Gnetum parvifolium]
Length = 229
Score = 435 bits (1118), Expect = e-144
Identities = 214/229 (93%), Positives = 220/229 (96%), Gaps = 4/229 (1%)
Frame = -1
Query: 2608 MYSFL----KGLTYLDKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLV 2441
MYSF GLTYLDKVYDWFEERLE+QAIADDITSKYVPPHVNIFYCLGGITLTCFLV
Sbjct: 1 MYSFFFWGGGGLTYLDKVYDWFEERLEVQAIADDITSKYVPPHVNIFYCLGGITLTCFLV 60
Query: 2440 QVATGFAMTFYYRPTVTEAFASVQYIISEVNFGWLIRSIHRWSASMMVLMMILHVFRVYL 2261
QVATGFAMTFYYRPTVTEAF SVQYI+ EVNFGWLIRSIHRWSASMMVLMMILHVFRVYL
Sbjct: 61 QVATGFAMTFYYRPTVTEAFTSVQYIMGEVNFGWLIRSIHRWSASMMVLMMILHVFRVYL 120
Query: 2260 TGGFKKPRELTWVTGVILAVLTVSFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVIGSSLV 2081
TGGFKKPRELTWVTGVILAVLTVSFGVTGYSLPWDQ+GYWAVKIVTGVPEAIPVIGS+LV
Sbjct: 121 TGGFKKPRELTWVTGVILAVLTVSFGVTGYSLPWDQVGYWAVKIVTGVPEAIPVIGSTLV 180
Query: 2080 ELLRGSVSVGQSTLTRFYSLHTFILPLLSAIFMLMHFLMIRKQGISGPL 1934
ELLRGS SVGQSTLTRFYSLHTFILPLL+A+FMLMHFLMIRKQGISGPL
Sbjct: 181 ELLRGSFSVGQSTLTRFYSLHTFILPLLTAVFMLMHFLMIRKQGISGPL 229
>YP_002519983.1 cytochrome b6 (chloroplast) [Ephedra equisetina] YP_009231451.1
cytochrome b6 (chloroplast) [Ephedra foeminea] BAH11351.1
cytochrome b6 (chloroplast) [Ephedra equisetina]
ALV90166.1 cytochrome b6 (chloroplast) [Ephedra foeminea]
Length = 215
Score = 431 bits (1107), Expect = e-143
Identities = 213/215 (99%), Positives = 214/215 (99%)
Frame = -1
Query: 2578 LDKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRP 2399
+ KVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRP
Sbjct: 1 MGKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRP 60
Query: 2398 TVTEAFASVQYIISEVNFGWLIRSIHRWSASMMVLMMILHVFRVYLTGGFKKPRELTWVT 2219
TVTEAFASVQYIISEVNFGWLIRSIHRWSASMMVLMMILHVFRVYLTGGFKKPRELTWVT
Sbjct: 61 TVTEAFASVQYIISEVNFGWLIRSIHRWSASMMVLMMILHVFRVYLTGGFKKPRELTWVT 120
Query: 2218 GVILAVLTVSFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVIGSSLVELLRGSVSVGQSTL 2039
GVILAVLTVSFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVIGSSLVELLRGSVSVGQSTL
Sbjct: 121 GVILAVLTVSFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVIGSSLVELLRGSVSVGQSTL 180
Query: 2038 TRFYSLHTFILPLLSAIFMLMHFLMIRKQGISGPL 1934
TRFYSLHTFILPLLSAIFMLMHFLMIRKQGISGPL
Sbjct: 181 TRFYSLHTFILPLLSAIFMLMHFLMIRKQGISGPL 215
>YP_005352737.1 petB gene product (chloroplast) [Ginkgo biloba] AEQ37143.1 cytochrome
b6 (chloroplast) [Ginkgo biloba] AEX98450.1 cytochrome b6
(chloroplast) [Ginkgo biloba] AEX98867.1 cytochrome b6
(chloroplast) [Ginkgo biloba] AEX99035.1 cytochrome b6
(chloroplast) [Ginkgo biloba]
Length = 218
Score = 428 bits (1101), Expect = e-142
Identities = 206/218 (94%), Positives = 215/218 (98%)
Frame = -1
Query: 2587 LTYLDKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFY 2408
+TYLDKVYDWFEERLEIQAIADDITSKYVPPHVN+FYCLGG+TLTCFLVQVATGFAMTFY
Sbjct: 1 MTYLDKVYDWFEERLEIQAIADDITSKYVPPHVNLFYCLGGVTLTCFLVQVATGFAMTFY 60
Query: 2407 YRPTVTEAFASVQYIISEVNFGWLIRSIHRWSASMMVLMMILHVFRVYLTGGFKKPRELT 2228
YRPTVTEAFASVQYI+ EVNFGWLIRS+HRWSASMMVLMMILHVFRVYLTGGFKKPRELT
Sbjct: 61 YRPTVTEAFASVQYIMIEVNFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKPRELT 120
Query: 2227 WVTGVILAVLTVSFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVIGSSLVELLRGSVSVGQ 2048
WVTGVILAVLTVSFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVIGS LVELLRGS+SVGQ
Sbjct: 121 WVTGVILAVLTVSFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSISVGQ 180
Query: 2047 STLTRFYSLHTFILPLLSAIFMLMHFLMIRKQGISGPL 1934
STLTRFYSLHTF+LPLL+A+FMLMHFLMIRKQGI GPL
Sbjct: 181 STLTRFYSLHTFVLPLLTAVFMLMHFLMIRKQGIPGPL 218
>YP_009334037.1 cytochrome b6 (chloroplast) [Merrillia caloxylon] AOZ20990.1
cytochrome b6 (chloroplast) [Merrillia caloxylon]
Length = 232
Score = 429 bits (1102), Expect = e-142
Identities = 209/230 (90%), Positives = 219/230 (95%), Gaps = 4/230 (1%)
Frame = -1
Query: 2611 FMYSFLKG----LTYLDKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFL 2444
F Y+ L+G TYL+KVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFL
Sbjct: 3 FSYTVLRGEFSWFTYLNKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFL 62
Query: 2443 VQVATGFAMTFYYRPTVTEAFASVQYIISEVNFGWLIRSIHRWSASMMVLMMILHVFRVY 2264
VQVATGFAMTFYYRPTVTEAFASVQYI++E NFGWLIRS+HRWSASMMVLMMILHVFRVY
Sbjct: 63 VQVATGFAMTFYYRPTVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVY 122
Query: 2263 LTGGFKKPRELTWVTGVILAVLTVSFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVIGSSL 2084
LTGGFKKPRELTWVTGV+LAVLT SFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVIGS L
Sbjct: 123 LTGGFKKPRELTWVTGVVLAVLTASFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVIGSPL 182
Query: 2083 VELLRGSVSVGQSTLTRFYSLHTFILPLLSAIFMLMHFLMIRKQGISGPL 1934
VELLRGS SVGQSTLTRFYSLHTF+LPLL+A+FMLMHFLMIRKQGISGPL
Sbjct: 183 VELLRGSASVGQSTLTRFYSLHTFVLPLLTAVFMLMHFLMIRKQGISGPL 232
>YP_009334122.1 cytochrome b6 (chloroplast) [Micromelum minutum] YP_009333781.1
cytochrome b6 (chloroplast) [Clausena excavata]
AOZ20735.1 cytochrome b6 (chloroplast) [Clausena
excavata] AOZ21075.1 cytochrome b6 (chloroplast)
[Micromelum minutum]
Length = 232
Score = 429 bits (1102), Expect = e-142
Identities = 209/230 (90%), Positives = 220/230 (95%), Gaps = 4/230 (1%)
Frame = -1
Query: 2611 FMYSFLKG----LTYLDKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFL 2444
F Y+ L+G TYL+KVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFL
Sbjct: 3 FSYTVLRGEFSWFTYLNKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFL 62
Query: 2443 VQVATGFAMTFYYRPTVTEAFASVQYIISEVNFGWLIRSIHRWSASMMVLMMILHVFRVY 2264
VQVATGFAMTFYYRPTVTEAFASVQYI++EVNFGWLIRS+HRWSASMMVLM+ILHVFRVY
Sbjct: 63 VQVATGFAMTFYYRPTVTEAFASVQYIMTEVNFGWLIRSVHRWSASMMVLMIILHVFRVY 122
Query: 2263 LTGGFKKPRELTWVTGVILAVLTVSFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVIGSSL 2084
LTGGFKKPRELTWVTGV+LAVLT SFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVIGS L
Sbjct: 123 LTGGFKKPRELTWVTGVVLAVLTASFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVIGSPL 182
Query: 2083 VELLRGSVSVGQSTLTRFYSLHTFILPLLSAIFMLMHFLMIRKQGISGPL 1934
VELLRGS SVGQSTLTRFYSLHTF+LPLL+A+FMLMHFLMIRKQGISGPL
Sbjct: 183 VELLRGSASVGQSTLTRFYSLHTFVLPLLTAVFMLMHFLMIRKQGISGPL 232
>YP_009333696.1 cytochrome b6 (chloroplast) [Murraya koenigii] AOZ20650.1 cytochrome
b6 (chloroplast) [Murraya koenigii]
Length = 232
Score = 429 bits (1102), Expect = e-142
Identities = 208/230 (90%), Positives = 221/230 (96%), Gaps = 4/230 (1%)
Frame = -1
Query: 2611 FMYSFLKG----LTYLDKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFL 2444
F Y+ L+G +TYL+KVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFL
Sbjct: 3 FSYTVLRGEFSWVTYLNKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFL 62
Query: 2443 VQVATGFAMTFYYRPTVTEAFASVQYIISEVNFGWLIRSIHRWSASMMVLMMILHVFRVY 2264
VQVATGFAMTFYYRPT+TEAFASVQYI++EVNFGWLIRS+HRWSASMMVLM+ILHVFRVY
Sbjct: 63 VQVATGFAMTFYYRPTITEAFASVQYIMTEVNFGWLIRSVHRWSASMMVLMIILHVFRVY 122
Query: 2263 LTGGFKKPRELTWVTGVILAVLTVSFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVIGSSL 2084
LTGGFKKPRELTWVTGV+LAVLT SFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVIGS L
Sbjct: 123 LTGGFKKPRELTWVTGVVLAVLTASFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVIGSPL 182
Query: 2083 VELLRGSVSVGQSTLTRFYSLHTFILPLLSAIFMLMHFLMIRKQGISGPL 1934
VELLRGS SVGQSTLTRFYSLHTF+LPLL+A+FMLMHFLMIRKQGISGPL
Sbjct: 183 VELLRGSASVGQSTLTRFYSLHTFVLPLLTAVFMLMHFLMIRKQGISGPL 232
>YP_009333867.1 cytochrome b6 (chloroplast) [Glycosmis mauritiana] AOZ20820.1
cytochrome b6 (chloroplast) [Glycosmis mauritiana]
Length = 232
Score = 428 bits (1100), Expect = e-141
Identities = 209/230 (90%), Positives = 219/230 (95%), Gaps = 4/230 (1%)
Frame = -1
Query: 2611 FMYSFLKG----LTYLDKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFL 2444
F Y+ L+G TYL+KVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFL
Sbjct: 3 FSYTVLRGEFSWFTYLNKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFL 62
Query: 2443 VQVATGFAMTFYYRPTVTEAFASVQYIISEVNFGWLIRSIHRWSASMMVLMMILHVFRVY 2264
VQVATGFAMTFYYRPTVTEAFASVQYI++EVNFGWLIRS+HRWSASMMVLM ILHVFRVY
Sbjct: 63 VQVATGFAMTFYYRPTVTEAFASVQYIMTEVNFGWLIRSVHRWSASMMVLMTILHVFRVY 122
Query: 2263 LTGGFKKPRELTWVTGVILAVLTVSFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVIGSSL 2084
LTGGFKKPRELTWVTGV+LAVLT SFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVIGS L
Sbjct: 123 LTGGFKKPRELTWVTGVVLAVLTASFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVIGSPL 182
Query: 2083 VELLRGSVSVGQSTLTRFYSLHTFILPLLSAIFMLMHFLMIRKQGISGPL 1934
VELLRGS SVGQSTLTRFYSLHTF+LPLL+A+FMLMHFLMIRKQGISGPL
Sbjct: 183 VELLRGSASVGQSTLTRFYSLHTFVLPLLTAVFMLMHFLMIRKQGISGPL 232
>YP_740506.1 cytochrome b6 (chloroplast) [Citrus sinensis] YP_009059379.1
cytochrome b6 (chloroplast) [Citrus aurantiifolia]
YP_009320127.1 cytochrome b6 (chloroplast) [Citrus
depressa] ABI49049.1 cytochrome b6 (chloroplast) [Citrus
sinensis] AIL50316.1 cytochrome b6 (chloroplast) [Citrus
aurantiifolia] BAV89971.1 cytochrome b6 (chloroplast)
[Citrus depressa]
Length = 234
Score = 428 bits (1100), Expect = e-141
Identities = 209/230 (90%), Positives = 219/230 (95%), Gaps = 4/230 (1%)
Frame = -1
Query: 2611 FMYSFLKG----LTYLDKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFL 2444
F Y+ L+G TYL+KVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFL
Sbjct: 5 FSYTVLRGEFSWFTYLNKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFL 64
Query: 2443 VQVATGFAMTFYYRPTVTEAFASVQYIISEVNFGWLIRSIHRWSASMMVLMMILHVFRVY 2264
VQVATGFAMTFYYRPTVTEAFASVQYI++EVNFGWLIRS+HRWSASMMVLM ILHVFRVY
Sbjct: 65 VQVATGFAMTFYYRPTVTEAFASVQYIMTEVNFGWLIRSVHRWSASMMVLMTILHVFRVY 124
Query: 2263 LTGGFKKPRELTWVTGVILAVLTVSFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVIGSSL 2084
LTGGFKKPRELTWVTGV+LAVLT SFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVIGS L
Sbjct: 125 LTGGFKKPRELTWVTGVVLAVLTASFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVIGSPL 184
Query: 2083 VELLRGSVSVGQSTLTRFYSLHTFILPLLSAIFMLMHFLMIRKQGISGPL 1934
VELLRGS SVGQSTLTRFYSLHTF+LPLL+A+FMLMHFLMIRKQGISGPL
Sbjct: 185 VELLRGSASVGQSTLTRFYSLHTFVLPLLTAVFMLMHFLMIRKQGISGPL 234
>YP_009176033.1 cytochrome b6 (chloroplast) [Ficus racemosa] ALI30729.1 cytochrome b6
(chloroplast) [Ficus racemosa]
Length = 232
Score = 427 bits (1099), Expect = e-141
Identities = 207/230 (90%), Positives = 220/230 (95%), Gaps = 4/230 (1%)
Frame = -1
Query: 2611 FMYSFLKG----LTYLDKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFL 2444
F Y+ L+G +TYL+K+YDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFL
Sbjct: 3 FSYTVLRGGVPRVTYLNKIYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFL 62
Query: 2443 VQVATGFAMTFYYRPTVTEAFASVQYIISEVNFGWLIRSIHRWSASMMVLMMILHVFRVY 2264
VQVATGFAMTFYYRPTVTEAFASVQYI++E NFGWLIRS+HRWSASMMVLMMILHVFRVY
Sbjct: 63 VQVATGFAMTFYYRPTVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVY 122
Query: 2263 LTGGFKKPRELTWVTGVILAVLTVSFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVIGSSL 2084
LTGGFKKPRELTWVTGV+LAVLT SFGVTGYSLPWDQIGYWAVKIVTGVPEAIP+IGS L
Sbjct: 123 LTGGFKKPRELTWVTGVVLAVLTASFGVTGYSLPWDQIGYWAVKIVTGVPEAIPLIGSPL 182
Query: 2083 VELLRGSVSVGQSTLTRFYSLHTFILPLLSAIFMLMHFLMIRKQGISGPL 1934
VELLRGS SVGQSTLTRFYSLHTF+LPLL+A+FMLMHFLMIRKQGISGPL
Sbjct: 183 VELLRGSASVGQSTLTRFYSLHTFVLPLLTAVFMLMHFLMIRKQGISGPL 232
>XP_010089870.1 Cytochrome b6 [Morus notabilis] EXB38500.1 Cytochrome b6 [Morus
notabilis]
Length = 234
Score = 427 bits (1099), Expect = e-141
Identities = 208/232 (89%), Positives = 219/232 (94%), Gaps = 6/232 (2%)
Frame = -1
Query: 2611 FMYSFLKG------LTYLDKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTC 2450
F Y+ L+G TYL+K+YDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTC
Sbjct: 3 FSYTVLRGGVPVPQFTYLNKIYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTC 62
Query: 2449 FLVQVATGFAMTFYYRPTVTEAFASVQYIISEVNFGWLIRSIHRWSASMMVLMMILHVFR 2270
FLVQVATGFAMTFYYRPTVTEAFASVQYI++E NFGWLIRS+HRWSASMMVLMMILHVFR
Sbjct: 63 FLVQVATGFAMTFYYRPTVTEAFASVQYIMTETNFGWLIRSVHRWSASMMVLMMILHVFR 122
Query: 2269 VYLTGGFKKPRELTWVTGVILAVLTVSFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVIGS 2090
VYLTGGFKKPRELTWVTGV+LAVLT SFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVIGS
Sbjct: 123 VYLTGGFKKPRELTWVTGVVLAVLTASFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVIGS 182
Query: 2089 SLVELLRGSVSVGQSTLTRFYSLHTFILPLLSAIFMLMHFLMIRKQGISGPL 1934
LVELLRGS SVGQSTLTRFYSLHTF+LPLL+A+FMLMHFLMIRKQGISGPL
Sbjct: 183 PLVELLRGSASVGQSTLTRFYSLHTFVLPLLTAVFMLMHFLMIRKQGISGPL 234
>YP_009262691.1 cytochrome b6 (chloroplast) [Styrax grandiflorus] ANI87356.1
cytochrome b6 (chloroplast) [Styrax grandiflorus]
Length = 220
Score = 427 bits (1097), Expect = e-141
Identities = 206/218 (94%), Positives = 214/218 (98%)
Frame = -1
Query: 2587 LTYLDKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFY 2408
LTYL+KVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFY
Sbjct: 3 LTYLNKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFY 62
Query: 2407 YRPTVTEAFASVQYIISEVNFGWLIRSIHRWSASMMVLMMILHVFRVYLTGGFKKPRELT 2228
YRPTVTEAFASVQYI++E NFGWLIRS+HRWSASMMVLMMILHVFRVYLTGGFKKPRELT
Sbjct: 63 YRPTVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKPRELT 122
Query: 2227 WVTGVILAVLTVSFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVIGSSLVELLRGSVSVGQ 2048
WVTGV+LAVLT SFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVIGS LVELLRGS SVGQ
Sbjct: 123 WVTGVVLAVLTASFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSASVGQ 182
Query: 2047 STLTRFYSLHTFILPLLSAIFMLMHFLMIRKQGISGPL 1934
STLTRFYSLHTF+LPLL+A+FMLMHFLMIRKQGISGPL
Sbjct: 183 STLTRFYSLHTFVLPLLTAVFMLMHFLMIRKQGISGPL 220
>YP_009259817.1 cytochrome b6 (chloroplast) [Leitneria floridana] ANC29218.1
cytochrome b6 (chloroplast) [Leitneria floridana]
Length = 234
Score = 427 bits (1098), Expect = e-141
Identities = 208/230 (90%), Positives = 219/230 (95%), Gaps = 4/230 (1%)
Frame = -1
Query: 2611 FMYSFLKG----LTYLDKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFL 2444
F Y+ L+G TYL+KVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFL
Sbjct: 5 FSYTVLRGEFPWFTYLNKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFL 64
Query: 2443 VQVATGFAMTFYYRPTVTEAFASVQYIISEVNFGWLIRSIHRWSASMMVLMMILHVFRVY 2264
VQVATGFAMTFYYRPTVTEAFASVQYI++E NFGWLIRS+HRWSASMMVLM+ILHVFRVY
Sbjct: 65 VQVATGFAMTFYYRPTVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVLMIILHVFRVY 124
Query: 2263 LTGGFKKPRELTWVTGVILAVLTVSFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVIGSSL 2084
LTGGFKKPRELTWVTGV+LAVLT SFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVIGS L
Sbjct: 125 LTGGFKKPRELTWVTGVVLAVLTASFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVIGSPL 184
Query: 2083 VELLRGSVSVGQSTLTRFYSLHTFILPLLSAIFMLMHFLMIRKQGISGPL 1934
VELLRGS SVGQSTLTRFYSLHTF+LPLL+A+FMLMHFLMIRKQGISGPL
Sbjct: 185 VELLRGSASVGQSTLTRFYSLHTFVLPLLTAVFMLMHFLMIRKQGISGPL 234
>YP_009144086.1 cytochrome b6 (chloroplast) [Wollemia nobilis] AKE36598.1 cytochrome
b6 (chloroplast) [Wollemia nobilis]
Length = 220
Score = 426 bits (1095), Expect = e-141
Identities = 208/219 (94%), Positives = 214/219 (97%)
Frame = -1
Query: 2590 GLTYLDKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTF 2411
G TYL+KVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTF
Sbjct: 2 GFTYLNKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTF 61
Query: 2410 YYRPTVTEAFASVQYIISEVNFGWLIRSIHRWSASMMVLMMILHVFRVYLTGGFKKPREL 2231
YYRPTV EAFASVQYI++EVNFGWLIRS+HRWSASMMVLMMILHVFRVYLTGGFKKPREL
Sbjct: 62 YYRPTVIEAFASVQYIMTEVNFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKPREL 121
Query: 2230 TWVTGVILAVLTVSFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVIGSSLVELLRGSVSVG 2051
TWVTGVILAVLTVSFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVIGS LVELLRGSVSV
Sbjct: 122 TWVTGVILAVLTVSFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSVSVS 181
Query: 2050 QSTLTRFYSLHTFILPLLSAIFMLMHFLMIRKQGISGPL 1934
QSTLTRFYSLHTFILPLL+A+FM MHFLMIRKQGISGPL
Sbjct: 182 QSTLTRFYSLHTFILPLLTAVFMSMHFLMIRKQGISGPL 220
>YP_009333952.1 cytochrome b6 (chloroplast) [Glycosmis pentaphylla] AOZ20905.1
cytochrome b6 (chloroplast) [Glycosmis pentaphylla]
Length = 232
Score = 426 bits (1096), Expect = e-141
Identities = 208/230 (90%), Positives = 218/230 (94%), Gaps = 4/230 (1%)
Frame = -1
Query: 2611 FMYSFLKG----LTYLDKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFL 2444
F Y+ L+G TYL+KVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFL
Sbjct: 3 FSYTVLRGEFSWFTYLNKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFL 62
Query: 2443 VQVATGFAMTFYYRPTVTEAFASVQYIISEVNFGWLIRSIHRWSASMMVLMMILHVFRVY 2264
VQVATGFAMTFYYRPTVTEAFASVQYI++EVNFGWLIRS+HRWSASMMVLM ILHVFRVY
Sbjct: 63 VQVATGFAMTFYYRPTVTEAFASVQYIMTEVNFGWLIRSVHRWSASMMVLMTILHVFRVY 122
Query: 2263 LTGGFKKPRELTWVTGVILAVLTVSFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVIGSSL 2084
LTGGFKKPRELTWVTGV+LAVLT SFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVIGS L
Sbjct: 123 LTGGFKKPRELTWVTGVVLAVLTASFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVIGSPL 182
Query: 2083 VELLRGSVSVGQSTLTRFYSLHTFILPLLSAIFMLMHFLMIRKQGISGPL 1934
VE LRGS SVGQSTLTRFYSLHTF+LPLL+A+FMLMHFLMIRKQGISGPL
Sbjct: 183 VEFLRGSASVGQSTLTRFYSLHTFVLPLLTAVFMLMHFLMIRKQGISGPL 232
>APX55477.1 cytochrome b6 (chloroplast) [Torreya jackii]
Length = 218
Score = 425 bits (1093), Expect = e-141
Identities = 206/218 (94%), Positives = 215/218 (98%)
Frame = -1
Query: 2587 LTYLDKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFY 2408
+TYL+KVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFY
Sbjct: 1 MTYLNKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFY 60
Query: 2407 YRPTVTEAFASVQYIISEVNFGWLIRSIHRWSASMMVLMMILHVFRVYLTGGFKKPRELT 2228
YRPTV EAFAS+QYI++EVNFGWLIRS+HRWSASMMVLMMILHVFRVYLTGGFKKPRELT
Sbjct: 61 YRPTVLEAFASIQYIMTEVNFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKPRELT 120
Query: 2227 WVTGVILAVLTVSFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVIGSSLVELLRGSVSVGQ 2048
WVTGVILAVLTVSFGVTGYSLPWDQIGYWAVKIVTGVPEAIP+IGS LVELLRGSVSVGQ
Sbjct: 121 WVTGVILAVLTVSFGVTGYSLPWDQIGYWAVKIVTGVPEAIPLIGSPLVELLRGSVSVGQ 180
Query: 2047 STLTRFYSLHTFILPLLSAIFMLMHFLMIRKQGISGPL 1934
STLTRFYSLHTFILPLL+A+FM MHFLMIRKQGISGPL
Sbjct: 181 STLTRFYSLHTFILPLLTAVFMSMHFLMIRKQGISGPL 218
>YP_009316812.1 cytochrome b6 (plastid) [Morus cathayana] AOW43709.1 cytochrome b6
(plastid) [Morus cathayana]
Length = 219
Score = 425 bits (1092), Expect = e-140
Identities = 204/217 (94%), Positives = 213/217 (98%)
Frame = -1
Query: 2584 TYLDKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYY 2405
TYL+K+YDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYY
Sbjct: 3 TYLNKIYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYY 62
Query: 2404 RPTVTEAFASVQYIISEVNFGWLIRSIHRWSASMMVLMMILHVFRVYLTGGFKKPRELTW 2225
RPTVTEAFASVQYI++E NFGWLIRS+HRWSASMMVLMMILHVFRVYLTGGFKKPRELTW
Sbjct: 63 RPTVTEAFASVQYIMTETNFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKPRELTW 122
Query: 2224 VTGVILAVLTVSFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVIGSSLVELLRGSVSVGQS 2045
VTGV+LAVLT SFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVIGS LVELLRGS SVGQS
Sbjct: 123 VTGVVLAVLTASFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSASVGQS 182
Query: 2044 TLTRFYSLHTFILPLLSAIFMLMHFLMIRKQGISGPL 1934
TLTRFYSLHTF+LPLL+A+FMLMHFLMIRKQGISGPL
Sbjct: 183 TLTRFYSLHTFVLPLLTAVFMLMHFLMIRKQGISGPL 219
>YP_009155569.1 cytochrome b6 (chloroplast) [Oryza barthii] YP_009155652.1 cytochrome
b6 (chloroplast) [Oryza glumipatula] YP_009155735.1
cytochrome b6 (chloroplast) [Oryza longistaminata]
YP_009155818.1 cytochrome b6 (chloroplast) [Oryza
officinalis] AAA85375.1 apocytochrome b6 (alt.)
(chloroplast) [Oryza sativa] AGY48976.1 cytochrome b6
(chloroplast) [Oryza rufipogon] AGZ19244.1 cytochrome b6
(chloroplast) [Oryza rufipogon] AJC99343.1 PetB
(chloroplast) [Oryza sativa Japonica Group] AJP33623.1
cytochrome b6 (chloroplast) [Oryza barthii] AJP33705.1
cytochrome b6 (chloroplast) [Oryza barthii] AJP33787.1
cytochrome b6 (chloroplast) [Oryza barthii] AJP33869.1
cytochrome b6 (chloroplast) [Oryza barthii] AJP33952.1
cytochrome b6 (chloroplast) [Oryza glaberrima] AJP34033.1
cytochrome b6 (chloroplast) [Oryza glaberrima] AJP34115.1
cytochrome b6 (chloroplast) [Oryza glumipatula]
AJP34198.1 cytochrome b6 (chloroplast) [Oryza
longistaminata] AJP34281.1 cytochrome b6 (chloroplast)
[Oryza longistaminata] AJP34364.1 cytochrome b6
(chloroplast) [Oryza officinalis] prf||1604469A
cytochrome b6 [Oryza sativa]
Length = 232
Score = 425 bits (1093), Expect = e-140
Identities = 207/230 (90%), Positives = 219/230 (95%), Gaps = 4/230 (1%)
Frame = -1
Query: 2611 FMYSFLKG----LTYLDKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFL 2444
F Y+ L G +TYL+KVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFL
Sbjct: 3 FSYTVLGGGFGLVTYLNKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFL 62
Query: 2443 VQVATGFAMTFYYRPTVTEAFASVQYIISEVNFGWLIRSIHRWSASMMVLMMILHVFRVY 2264
VQVATGFAMTFYYRPTVTEAF+SVQYI++E NFGWLIRS+HRWSASMMVLMMILHVFRVY
Sbjct: 63 VQVATGFAMTFYYRPTVTEAFSSVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVY 122
Query: 2263 LTGGFKKPRELTWVTGVILAVLTVSFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVIGSSL 2084
LTGGFKKPRELTWVTGV+LAVLT SFGVTGYSLPWDQIGYWAVKIVTGVP+AIPVIGS L
Sbjct: 123 LTGGFKKPRELTWVTGVVLAVLTASFGVTGYSLPWDQIGYWAVKIVTGVPDAIPVIGSPL 182
Query: 2083 VELLRGSVSVGQSTLTRFYSLHTFILPLLSAIFMLMHFLMIRKQGISGPL 1934
VELLRGS SVGQSTLTRFYSLHTF+LPLL+A+FMLMHFLMIRKQGISGPL
Sbjct: 183 VELLRGSASVGQSTLTRFYSLHTFVLPLLTAVFMLMHFLMIRKQGISGPL 232
>AHY32839.1 cytochrome b6 (chloroplast) [Libidibia coriaria]
Length = 219
Score = 424 bits (1091), Expect = e-140
Identities = 205/217 (94%), Positives = 213/217 (98%)
Frame = -1
Query: 2584 TYLDKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYY 2405
TYL+KVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYY
Sbjct: 3 TYLNKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYY 62
Query: 2404 RPTVTEAFASVQYIISEVNFGWLIRSIHRWSASMMVLMMILHVFRVYLTGGFKKPRELTW 2225
RPTVTEAFASVQYI++E NFGWLIRS+HRWSASMMVLMMILHVFRVYLTGGFKKPRELTW
Sbjct: 63 RPTVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKPRELTW 122
Query: 2224 VTGVILAVLTVSFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVIGSSLVELLRGSVSVGQS 2045
VTGV+LAVLT SFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVIGSSLVELLRGS SVGQS
Sbjct: 123 VTGVVLAVLTASFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVIGSSLVELLRGSASVGQS 182
Query: 2044 TLTRFYSLHTFILPLLSAIFMLMHFLMIRKQGISGPL 1934
TLTRFYSLHTF+LPLL+A+FMLMHF MIRKQGISGPL
Sbjct: 183 TLTRFYSLHTFVLPLLTAVFMLMHFPMIRKQGISGPL 219