BLASTX nr result
ID: Ephedra29_contig00003623
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra29_contig00003623
(4024 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
EOY28631.1 PCF11P-similar protein 4, putative isoform 2 [Theobro... 241 2e-63
XP_018849826.1 PREDICTED: polyadenylation and cleavage factor ho... 244 2e-63
ERN19518.1 hypothetical protein AMTR_s00062p00031880 [Amborella ... 246 3e-63
XP_011628430.1 PREDICTED: polyadenylation and cleavage factor ho... 246 4e-63
XP_006449074.1 hypothetical protein CICLE_v10014158mg [Citrus cl... 244 4e-63
XP_019441561.1 PREDICTED: polyadenylation and cleavage factor ho... 241 5e-63
XP_008808980.1 PREDICTED: polyadenylation and cleavage factor ho... 245 5e-63
XP_006467998.1 PREDICTED: polyadenylation and cleavage factor ho... 243 9e-63
XP_017645983.1 PREDICTED: polyadenylation and cleavage factor ho... 244 1e-62
XP_017645981.1 PREDICTED: polyadenylation and cleavage factor ho... 244 1e-62
XP_018849825.1 PREDICTED: polyadenylation and cleavage factor ho... 244 1e-62
XP_018849824.1 PREDICTED: polyadenylation and cleavage factor ho... 244 1e-62
XP_016683610.1 PREDICTED: polyadenylation and cleavage factor ho... 241 1e-62
XP_006467996.1 PREDICTED: polyadenylation and cleavage factor ho... 243 1e-62
XP_008462986.1 PREDICTED: polyadenylation and cleavage factor ho... 243 1e-62
XP_008462960.1 PREDICTED: polyadenylation and cleavage factor ho... 243 1e-62
KJB67159.1 hypothetical protein B456_010G178200 [Gossypium raimo... 243 2e-62
XP_015382498.1 PREDICTED: polyadenylation and cleavage factor ho... 243 2e-62
XP_016753659.1 PREDICTED: polyadenylation and cleavage factor ho... 241 2e-62
KRH35572.1 hypothetical protein GLYMA_10G251100 [Glycine max] 235 2e-62
>EOY28631.1 PCF11P-similar protein 4, putative isoform 2 [Theobroma cacao]
Length = 733
Score = 241 bits (615), Expect = 2e-63
Identities = 116/179 (64%), Positives = 138/179 (77%)
Frame = -3
Query: 863 PGPHFDDIGTEFSSDVLKTRHEHVLRSLYEDLPRQCTTCGLRFKLQEDHSNHMDWHVSRN 684
P P D +G EF++D+LK RHE + +LY DLPRQCTTCGLRFK QE+HS HMDWHV+RN
Sbjct: 532 PTPIQDPVGLEFNADLLKVRHESSISALYADLPRQCTTCGLRFKFQEEHSTHMDWHVTRN 591
Query: 683 RTISKNRKQRVTQIHRKWFVSFKDWLSGTEATTSEVVPPFSPMEAVPXXXXXXELCVPAD 504
R +SKNRKQ+ + RKWFVS WLSG EA ++ VP F P E V EL VPAD
Sbjct: 592 R-MSKNRKQKPS---RKWFVSASMWLSGAEALGTDAVPGFLPTENVVEKKDDEELAVPAD 647
Query: 503 EEQSLCALCGEPFEDFYSDERDEWMYKGAVYMNAPSGQYESIDKSQLGEIVHAKCRSDS 327
E+QS+CALCGEPF+DFYSDE +EWMY+GAVYMNAP+G E +D+SQLG IVHAKCRS+S
Sbjct: 648 EDQSVCALCGEPFDDFYSDETEEWMYRGAVYMNAPNGSIEGMDRSQLGPIVHAKCRSES 706
Score = 170 bits (430), Expect = 8e-40
Identities = 90/163 (55%), Positives = 111/163 (68%)
Frame = -3
Query: 3656 IIVLYREALSELIFNSKPVITDLTIIAGELVHLAQDVANAVCNHVLEVPVDQKLPSLYLL 3477
I+ LY LSEL FNSKP+ITDLTIIAGE + +A+A+C +LEVPV+QKLPSLYLL
Sbjct: 49 IVQLYEAVLSELTFNSKPIITDLTIIAGEQREHGEGIADAICARILEVPVEQKLPSLYLL 108
Query: 3476 DSIVKNIGGEYVKYFAARLPEVFIKSYQQVDPNLHHSMKRLFHTWRVVFPQVQLHLIEAE 3297
DSIVKNIG EYV++F++RLPEVF ++Y+QV+PNL+ +M+ LF TW VFP L IE +
Sbjct: 109 DSIVKNIGREYVRHFSSRLPEVFCEAYRQVNPNLYPAMRHLFGTWSTVFPPSVLRKIEIQ 168
Query: 3296 LNFPPXXXXXXXXXXSRPQLESHAQSPGHSIHVNPKYLVEARQ 3168
L F S ES P H IHVNPKYL + Q
Sbjct: 169 LQFSQSANQQSPGVTSLRSSES--PRPTHGIHVNPKYLRQLEQ 209
>XP_018849826.1 PREDICTED: polyadenylation and cleavage factor homolog 4-like isoform
X3 [Juglans regia]
Length = 879
Score = 244 bits (622), Expect = 2e-63
Identities = 119/205 (58%), Positives = 145/205 (70%)
Frame = -3
Query: 863 PGPHFDDIGTEFSSDVLKTRHEHVLRSLYEDLPRQCTTCGLRFKLQEDHSNHMDWHVSRN 684
P P D +G EF+ D+LK RHE + SLY DLPRQCTTCGLRFK QE+HS+HMDWHV++N
Sbjct: 677 PTPIQDSVGVEFNVDLLKVRHETAISSLYADLPRQCTTCGLRFKCQEEHSSHMDWHVTKN 736
Query: 683 RTISKNRKQRVTQIHRKWFVSFKDWLSGTEATTSEVVPPFSPMEAVPXXXXXXELCVPAD 504
R +SKNRKQ+ + RKWFVS WLSG EA +E VP F P E + E+ VPAD
Sbjct: 737 R-MSKNRKQKPS---RKWFVSSSMWLSGAEALGTEAVPGFLPTEIIVEKKDDEEMAVPAD 792
Query: 503 EEQSLCALCGEPFEDFYSDERDEWMYKGAVYMNAPSGQYESIDKSQLGEIVHAKCRSDSV 324
E+Q+ CALCGEPF+DFYSDE +EWMYKGAVY+NAP G +D+SQLG IVHAKCRS+S
Sbjct: 793 EDQNACALCGEPFDDFYSDETEEWMYKGAVYLNAPCGSTAGMDRSQLGPIVHAKCRSESS 852
Query: 323 GSTLDSREEDVDGSDNPGVRPKKAR 249
+ D +D G G + K+ R
Sbjct: 853 AVSTDGYRQDEGGITAEGSQSKRMR 877
Score = 100 bits (250), Expect = 9e-18
Identities = 155/644 (24%), Positives = 235/644 (36%), Gaps = 75/644 (11%)
Frame = -3
Query: 3410 FIKSYQQVDPNLHHSMKRLFHTWRVVFPQVQLHLIEAELNFPPXXXXXXXXXXSRPQLES 3231
F ++Y+QV PN ++SM+ LF TW VFP LH IE +L F P P S
Sbjct: 13 FCEAYRQVHPNQYNSMRHLFGTWSAVFPPSVLHKIEVQLQFSP--LVNQQSSGLNPLRAS 70
Query: 3230 HAQSPGHSIHVNPKYLVEARQPFKHSRMEASNSEVNEELSSPERSSGSIRGSPKVWHEPI 3051
+ P H IHVNPKYL + F+HS ++++ + RG+ V
Sbjct: 71 ESPRPSHGIHVNPKYL----RQFEHSAVDSNIQQA--------------RGTSAV----- 107
Query: 3050 XXXXXXXXXXXXXSYIEHGYAPKSSTGYGESDYNISPQRTRAGRSISPRMGIPNPHSPLA 2871
+ K + G+ E D + + ++G
Sbjct: 108 -----------------KMFGKKPAIGFDEFD-------SGQAELVPSQVG-------AE 136
Query: 2870 RLRTTGRVGSPP--RGAPMVRASSPPRLPSIGRDPSPS-VSAGRGLPPPRTTFGRVNSPA 2700
RL +TG G+ P GA VR PP +GR SPS R L F +SP
Sbjct: 137 RLSSTGNAGNAPFTFGANKVR---PPSTIRLGRPSSPSRTRPDRSLSLAVEEFAADHSPR 193
Query: 2699 TSIG-------------RRSEGAVETDNGWERPWSAKGEINYARPLDRVNPSIGYGHRNG 2559
+G R+ E +G +R + + N+ N S G H+
Sbjct: 194 RFVGGGSPAHPIYEYGLSRATARDEEMSGRQRKHYSDNKHNHFETKLLHNLSNGREHQG- 252
Query: 2558 YAWRPQVMPGALIDAYGNYRGQRSLTG-PLSYLHPPQENDILS-SSRALSRNWRNSEEEE 2385
P ALIDAYGN G+RS PL Q D+ S ++ + +W+ +EEEE
Sbjct: 253 --------PRALIDAYGNDTGKRSFNNKPLQ----GQRLDLNSIDNKVATPSWQTTEEEE 300
Query: 2384 YSWENLSPRAGTHTR----------GIDESRKEDVYVGE-KLPVVD---VN--------- 2274
+ WE++SP R GI + G+ +LP VD VN
Sbjct: 301 FDWEDMSPTLADSNRSNDFLPRTRPGIGVQSASALNAGQAQLPAVDDASVNAEDSVPLLS 360
Query: 2273 -----------------NRMDIDSADSDEWHMPSSLSHSERQDTFKESLPQRESESQPYN 2145
N++ D W++P LS ++ L R S S
Sbjct: 361 QFGHGSMRKISGFQAERNQIIDPRYPQDPWNLPPHLSKGRGRNYNLPLLASRISSSDIDK 420
Query: 2144 FSQ--PGIPSGNKEALSELPSAMQESSLGNRTTGGRP----------QSILYHNHNSVLQ 2001
+P + + + S S+L + + RP S+ HN
Sbjct: 421 MPSLIDKLPDADPQLHGTIISRFGSSNLDSISVEARPTVLPASRGVRPSLNVHNSRPPYL 480
Query: 2000 QNIKSYPHVQGNVSMSNSTYGYGKPSSLENDSKIGNTTNLSFGKHSKPASNAQ--QFTAE 1827
Q+I V G S +T ++L + + S G ++ S+A+ Q +
Sbjct: 481 QHIFPRQRVMGGQFESINT--SNAVNNLRPNGSLHMPELQSDGFRNRELSSAKLPQLPNQ 538
Query: 1826 SGGSDNIPPMN---ASPSQMSFQRQQPVQKSLSPSLVPQSVRPP 1704
G ++ N +P + F Q SL+ + P V PP
Sbjct: 539 HAGLIHVTQRNQVQGTPLRPQFLPSQEAHPSLAAVVQPHLVAPP 582
>ERN19518.1 hypothetical protein AMTR_s00062p00031880 [Amborella trichopoda]
Length = 1045
Score = 246 bits (627), Expect = 3e-63
Identities = 178/501 (35%), Positives = 244/501 (48%), Gaps = 13/501 (2%)
Frame = -3
Query: 3788 SNNGNGVAAPVLANQQRGGALQEKFXXXXXXXXXXXXXXXXXXEIIVLYREALSELIFNS 3609
S N N A L + ++ ++F +++ LY E LSEL FN
Sbjct: 8 SRNANATAGFPLGQRPPPPSILDRFKAYLREREEEEEMGVSSEDVVALYMEELSELTFNC 67
Query: 3608 KPVITDLTIIAGELVHLAQDVANAVCNHVLEVPVDQKLPSLYLLDSIVKNIGGEYVKYFA 3429
KP+IT+LTIIAGE A+ + A+C ++EVP +QKLPSLYLLDSIVKNIGGEYV YF+
Sbjct: 68 KPIITELTIIAGEQQEYAKGIVAAICVRIIEVPAEQKLPSLYLLDSIVKNIGGEYVNYFS 127
Query: 3428 ARLPEVFIKSYQQVDPNLHHSMKRLFHTWRVVFPQVQLHLIEAELNFPPXXXXXXXXXXS 3249
RLP+VF K+Y+QVDP + +M+ LF TW +FP L IE EL F P S
Sbjct: 128 LRLPDVFCKAYRQVDPGQYQAMRHLFGTWTGIFPSSVLRAIEVELQFSPVRRPSSGMAPS 187
Query: 3248 RPQLESHAQSPGHSIHVNPKYLVEARQPFKHSRMEASNSEVNEELSS--PERSSGSIRGS 3075
RP +S P H IHVNPKYL EAR+ F++ + E N +++ ER S
Sbjct: 188 RPS-DSQPPRPAHGIHVNPKYL-EARRQFENPNVIKRERENNLHMTAFEGERMERVALES 245
Query: 3074 PKVWHEPIXXXXXXXXXXXXXSYIE-HGYAPKSSTGYGESDYNISPQRTRAGRSISP-RM 2901
P+ W S I +G P S YG+ D + + +SP R+
Sbjct: 246 PEGWSGASPRLHTNQQARGVVSSIPIYGRKPAS---YGDIDLD-------HNQGLSPGRV 295
Query: 2900 GIPNPHSPLARLRTTGRVGSPPRG-----APMVRASSPPRLPSIG---RDPSPSVSAGRG 2745
G+ + P L ++ + +P +P + S P PS G R+ SP+ +
Sbjct: 296 GVVSARVPSGNLSSS--IAAPENKILKPLSPSISGSETPSSPSEGAFMREISPARVGHQK 353
Query: 2744 LPPPRTTFGRVNSPATSIGRRSEGAVETDNGWERPWSAKGEINYARPLDRVNPSIGYGHR 2565
P R FG +GR E E + WER W + +PS Y
Sbjct: 354 ASPSRVGFG--------MGRVDEKLGERSDQWERRWVDDSGAHQMETTS--SPSRVYIQN 403
Query: 2564 NGYAWRPQVMPGALIDAYGNYRGQRSLTGPLSYLHP-PQENDILSSSRALSRNWRNSEEE 2388
NG P P ALIDAYGNYRG+ + L + P P+ N S+ + NW+N+EEE
Sbjct: 404 NG----PD--PRALIDAYGNYRGKGVMLEKLPIIAPGPKVNGF--SNITTATNWQNAEEE 455
Query: 2387 EYSWENLSPRAGTHTRGIDES 2325
EY WE++SP H + D +
Sbjct: 456 EYVWEDMSPTLSNHKKSNDHA 476
Score = 235 bits (599), Expect = 1e-59
Identities = 115/188 (61%), Positives = 140/188 (74%)
Frame = -3
Query: 842 IGTEFSSDVLKTRHEHVLRSLYEDLPRQCTTCGLRFKLQEDHSNHMDWHVSRNRTISKNR 663
IG +F+++ LK RHE V+ +LY D+ RQC TCGLRF QE+H HMDWHV++NR +SKNR
Sbjct: 859 IGLDFNAEQLKVRHESVINALYTDMWRQCATCGLRFNSQEEHCIHMDWHVTKNR-MSKNR 917
Query: 662 KQRVTQIHRKWFVSFKDWLSGTEATTSEVVPPFSPMEAVPXXXXXXELCVPADEEQSLCA 483
KQ + RKWFVS K+WLSGTE SE VP F P+E VP E+ VPADE QS+CA
Sbjct: 918 KQNPS---RKWFVSAKEWLSGTETLGSEPVPGFLPVETVPEKKEDEEMAVPADENQSVCA 974
Query: 482 LCGEPFEDFYSDERDEWMYKGAVYMNAPSGQYESIDKSQLGEIVHAKCRSDSVGSTLDSR 303
LCGEPF+DFYSDE +EWMYKGAVY+NAP+G E +DKSQLG IVHAKCRS+S +
Sbjct: 975 LCGEPFDDFYSDETEEWMYKGAVYLNAPAGSIEGMDKSQLGPIVHAKCRSEST-----TG 1029
Query: 302 EEDVDGSD 279
ED +G+D
Sbjct: 1030 HEDFEGAD 1037
>XP_011628430.1 PREDICTED: polyadenylation and cleavage factor homolog 4 [Amborella
trichopoda] XP_011628431.1 PREDICTED: polyadenylation and
cleavage factor homolog 4 [Amborella trichopoda]
Length = 1054
Score = 246 bits (627), Expect = 4e-63
Identities = 178/501 (35%), Positives = 244/501 (48%), Gaps = 13/501 (2%)
Frame = -3
Query: 3788 SNNGNGVAAPVLANQQRGGALQEKFXXXXXXXXXXXXXXXXXXEIIVLYREALSELIFNS 3609
S N N A L + ++ ++F +++ LY E LSEL FN
Sbjct: 8 SRNANATAGFPLGQRPPPPSILDRFKAYLREREEEEEMGVSSEDVVALYMEELSELTFNC 67
Query: 3608 KPVITDLTIIAGELVHLAQDVANAVCNHVLEVPVDQKLPSLYLLDSIVKNIGGEYVKYFA 3429
KP+IT+LTIIAGE A+ + A+C ++EVP +QKLPSLYLLDSIVKNIGGEYV YF+
Sbjct: 68 KPIITELTIIAGEQQEYAKGIVAAICVRIIEVPAEQKLPSLYLLDSIVKNIGGEYVNYFS 127
Query: 3428 ARLPEVFIKSYQQVDPNLHHSMKRLFHTWRVVFPQVQLHLIEAELNFPPXXXXXXXXXXS 3249
RLP+VF K+Y+QVDP + +M+ LF TW +FP L IE EL F P S
Sbjct: 128 LRLPDVFCKAYRQVDPGQYQAMRHLFGTWTGIFPSSVLRAIEVELQFSPVRRPSSGMAPS 187
Query: 3248 RPQLESHAQSPGHSIHVNPKYLVEARQPFKHSRMEASNSEVNEELSS--PERSSGSIRGS 3075
RP +S P H IHVNPKYL EAR+ F++ + E N +++ ER S
Sbjct: 188 RPS-DSQPPRPAHGIHVNPKYL-EARRQFENPNVIKRERENNLHMTAFEGERMERVALES 245
Query: 3074 PKVWHEPIXXXXXXXXXXXXXSYIE-HGYAPKSSTGYGESDYNISPQRTRAGRSISP-RM 2901
P+ W S I +G P S YG+ D + + +SP R+
Sbjct: 246 PEGWSGASPRLHTNQQARGVVSSIPIYGRKPAS---YGDIDLD-------HNQGLSPGRV 295
Query: 2900 GIPNPHSPLARLRTTGRVGSPPRG-----APMVRASSPPRLPSIG---RDPSPSVSAGRG 2745
G+ + P L ++ + +P +P + S P PS G R+ SP+ +
Sbjct: 296 GVVSARVPSGNLSSS--IAAPENKILKPLSPSISGSETPSSPSEGAFMREISPARVGHQK 353
Query: 2744 LPPPRTTFGRVNSPATSIGRRSEGAVETDNGWERPWSAKGEINYARPLDRVNPSIGYGHR 2565
P R FG +GR E E + WER W + +PS Y
Sbjct: 354 ASPSRVGFG--------MGRVDEKLGERSDQWERRWVDDSGAHQMETTS--SPSRVYIQN 403
Query: 2564 NGYAWRPQVMPGALIDAYGNYRGQRSLTGPLSYLHP-PQENDILSSSRALSRNWRNSEEE 2388
NG P P ALIDAYGNYRG+ + L + P P+ N S+ + NW+N+EEE
Sbjct: 404 NG----PD--PRALIDAYGNYRGKGVMLEKLPIIAPGPKVNGF--SNITTATNWQNAEEE 455
Query: 2387 EYSWENLSPRAGTHTRGIDES 2325
EY WE++SP H + D +
Sbjct: 456 EYVWEDMSPTLSNHKKSNDHA 476
Score = 235 bits (599), Expect = 1e-59
Identities = 115/188 (61%), Positives = 140/188 (74%)
Frame = -3
Query: 842 IGTEFSSDVLKTRHEHVLRSLYEDLPRQCTTCGLRFKLQEDHSNHMDWHVSRNRTISKNR 663
IG +F+++ LK RHE V+ +LY D+ RQC TCGLRF QE+H HMDWHV++NR +SKNR
Sbjct: 859 IGLDFNAEQLKVRHESVINALYTDMWRQCATCGLRFNSQEEHCIHMDWHVTKNR-MSKNR 917
Query: 662 KQRVTQIHRKWFVSFKDWLSGTEATTSEVVPPFSPMEAVPXXXXXXELCVPADEEQSLCA 483
KQ + RKWFVS K+WLSGTE SE VP F P+E VP E+ VPADE QS+CA
Sbjct: 918 KQNPS---RKWFVSAKEWLSGTETLGSEPVPGFLPVETVPEKKEDEEMAVPADENQSVCA 974
Query: 482 LCGEPFEDFYSDERDEWMYKGAVYMNAPSGQYESIDKSQLGEIVHAKCRSDSVGSTLDSR 303
LCGEPF+DFYSDE +EWMYKGAVY+NAP+G E +DKSQLG IVHAKCRS+S +
Sbjct: 975 LCGEPFDDFYSDETEEWMYKGAVYLNAPAGSIEGMDKSQLGPIVHAKCRSEST-----TG 1029
Query: 302 EEDVDGSD 279
ED +G+D
Sbjct: 1030 HEDFEGAD 1037
>XP_006449074.1 hypothetical protein CICLE_v10014158mg [Citrus clementina] ESR62314.1
hypothetical protein CICLE_v10014158mg [Citrus
clementina]
Length = 975
Score = 244 bits (624), Expect = 4e-63
Identities = 119/203 (58%), Positives = 148/203 (72%)
Frame = -3
Query: 857 PHFDDIGTEFSSDVLKTRHEHVLRSLYEDLPRQCTTCGLRFKLQEDHSNHMDWHVSRNRT 678
P D +G EF++D+ K RHE + SLY +LPRQCTTCGLRFK QE+HS+HMDWHV++NR
Sbjct: 776 PVQDSVGLEFNADLHKLRHESAISSLYANLPRQCTTCGLRFKCQEEHSSHMDWHVTKNR- 834
Query: 677 ISKNRKQRVTQIHRKWFVSFKDWLSGTEATTSEVVPPFSPMEAVPXXXXXXELCVPADEE 498
+SKNRKQ+ + RKWFVS WLSGTEA ++ +P F P E + E+ VPADE+
Sbjct: 835 MSKNRKQKPS---RKWFVSASMWLSGTEALGTDAIPGFLPAEPILEKKDDEEMAVPADED 891
Query: 497 QSLCALCGEPFEDFYSDERDEWMYKGAVYMNAPSGQYESIDKSQLGEIVHAKCRSDSVGS 318
Q++CALCGEPF+DFYSDE +EWMYKGAVYMNAP+G E +D+SQLG IVHAKCRS+S
Sbjct: 892 QNVCALCGEPFDDFYSDETEEWMYKGAVYMNAPNGSTEGMDRSQLGPIVHAKCRSESTVI 951
Query: 317 TLDSREEDVDGSDNPGVRPKKAR 249
D + D GS G + KK R
Sbjct: 952 PSDDFKRDEGGSSEEGNQRKKLR 974
Score = 188 bits (477), Expect = 7e-45
Identities = 163/504 (32%), Positives = 217/504 (43%), Gaps = 7/504 (1%)
Frame = -3
Query: 3803 PNPSLSNNGNGVAAPVLANQQRGGALQEKFXXXXXXXXXXXXXXXXXXE------IIVLY 3642
P+PSL+ N A P Q+ + +KF I+ LY
Sbjct: 14 PSPSLAFTNNNKAMPNELAQKPSTPIIDKFRALLKLREEEARVGDGAGTTLSTDEIVQLY 73
Query: 3641 REALSELIFNSKPVITDLTIIAGELVHLAQDVANAVCNHVLEVPVDQKLPSLYLLDSIVK 3462
L+EL FNSKP+ITDLTIIAGE +A A+C +LE PV+ KLPSLYLLDSIVK
Sbjct: 74 ETVLAELTFNSKPIITDLTIIAGEQRAHGDGIAEAICTRILEAPVNHKLPSLYLLDSIVK 133
Query: 3461 NIGGEYVKYFAARLPEVFIKSYQQVDPNLHHSMKRLFHTWRVVFPQVQLHLIEAELNFPP 3282
NI EYV+YF++RLPEVF ++Y+QV P+L+ +M+ LF TW VFPQ LH IEAEL F
Sbjct: 134 NINKEYVRYFSSRLPEVFCEAYRQVHPDLYSAMQHLFGTWSTVFPQAVLHKIEAELQFSS 193
Query: 3281 XXXXXXXXXXSRPQLESHAQSPGHSIHVNPKYLVEARQPFKHSRMEASNSEVNEELSSPE 3102
S ES P H IHVNPKY+ + F+HS ++ V + S+P
Sbjct: 194 QVNKQSSNVNSLRASES--PRPTHGIHVNPKYI----RQFEHSNTDS----VGGQRSNPA 243
Query: 3101 RSSGSIRGSPKVWHEPIXXXXXXXXXXXXXSYIEHGYAPKSSTGYGESDYNISPQRTRAG 2922
S G +++ G + + S +R G
Sbjct: 244 GSVG-----------------------------------RATFALGANKLHPS-STSRLG 267
Query: 2921 RSISPRMGIPNPHSPLARLRTTGRVGSPPRGAPMVRASSPPRLPSIGRDPS-PSVSAGRG 2745
RS+SP +G G +SP RL G PS P G G
Sbjct: 268 RSLSP-------------------LGIGSEGDEFAVENSPRRLE--GTSPSHPVFDYGIG 306
Query: 2744 LPPPRTTFGRVNSPATSIGRRSEGAVETDNGWERPWSAKGEINYARPLDRVNPSIGYGHR 2565
R+ G E + W P + N S G+ H+
Sbjct: 307 --------------------RAIGRNEEVSEWRNP------NRFESTSTSYNLSNGHEHQ 340
Query: 2564 NGYAWRPQVMPGALIDAYGNYRGQRSLTGPLSYLHPPQENDILSSSRALSRNWRNSEEEE 2385
P ALIDAYG+ R + S P H ++ SR+W+N+EEEE
Sbjct: 341 G---------PRALIDAYGSDR-RASNNKPSQVGHMGING---MGNKVASRSWQNTEEEE 387
Query: 2384 YSWENLSPRAGTHTRGIDESRKED 2313
+ WE++SP +D RK D
Sbjct: 388 FDWEDMSPTL------LDRGRKFD 405
>XP_019441561.1 PREDICTED: polyadenylation and cleavage factor homolog 4-like isoform
X4 [Lupinus angustifolius]
Length = 805
Score = 241 bits (616), Expect = 5e-63
Identities = 122/239 (51%), Positives = 160/239 (66%)
Frame = -3
Query: 965 QVDNPAKVSAVSTLASTISVNCSNDLPRPPFINGPGPHFDDIGTEFSSDVLKTRHEHVLR 786
Q A + +++L S ++ N LP D +GTEF+ D+LK RHE +
Sbjct: 580 QQPTAAYSNLINSLMSQGMISLGNQLPPQ----------DSVGTEFNPDILKLRHESAIN 629
Query: 785 SLYEDLPRQCTTCGLRFKLQEDHSNHMDWHVSRNRTISKNRKQRVTQIHRKWFVSFKDWL 606
+LY DLPRQCTTCGLRFK QE+HS+HMDWHV++NR +SKNRKQ+ + RKWFVS + WL
Sbjct: 630 ALYGDLPRQCTTCGLRFKCQEEHSSHMDWHVTKNR-MSKNRKQKPS---RKWFVSDRMWL 685
Query: 605 SGTEATTSEVVPPFSPMEAVPXXXXXXELCVPADEEQSLCALCGEPFEDFYSDERDEWMY 426
SG EA +E VP F P E V EL VPA+E+Q+ CALCGEPF++FYSDE +EWMY
Sbjct: 686 SGAEALGAESVPGFLPTEVVDEKKDDDELAVPAEEDQNTCALCGEPFDEFYSDEMEEWMY 745
Query: 425 KGAVYMNAPSGQYESIDKSQLGEIVHAKCRSDSVGSTLDSREEDVDGSDNPGVRPKKAR 249
+GAVY+NAP+G +D+SQLG I+HAKCRS+S S + D G++ G + K+ R
Sbjct: 746 RGAVYLNAPTGTTPGMDRSQLGPIIHAKCRSESTVSPSEDFALDAGGANEEGSQRKRMR 804
>XP_008808980.1 PREDICTED: polyadenylation and cleavage factor homolog 4-like isoform
X1 [Phoenix dactylifera] XP_008808981.1 PREDICTED:
polyadenylation and cleavage factor homolog 4-like
isoform X1 [Phoenix dactylifera] XP_008808982.1
PREDICTED: polyadenylation and cleavage factor homolog
4-like isoform X1 [Phoenix dactylifera] XP_008808983.1
PREDICTED: polyadenylation and cleavage factor homolog
4-like isoform X1 [Phoenix dactylifera]
Length = 1065
Score = 245 bits (626), Expect = 5e-63
Identities = 176/449 (39%), Positives = 222/449 (49%), Gaps = 10/449 (2%)
Frame = -3
Query: 3656 IIVLYREALSELIFNSKPVITDLTIIAGELVHLAQDVANAVCNHVLEVPVDQKLPSLYLL 3477
I+ LY+E LSEL FNSKP+ITDL+IIAG+ A+ +ANA+C +LEVPVDQKLPSLYLL
Sbjct: 78 IVRLYKELLSELTFNSKPIITDLSIIAGQHSQFAEGIANAICARILEVPVDQKLPSLYLL 137
Query: 3476 DSIVKNIGGEYVKYFAARLPEVFIKSYQQVDPNLHHSMKRLFHTWRVVFPQVQLHLIEAE 3297
DSIVKNIG +YV+YFAARLP+VF ++Y QV P + SM+ LF TW VFP L IE E
Sbjct: 138 DSIVKNIGRDYVRYFAARLPKVFCEAYNQVHPTQYPSMRHLFGTWFQVFPLSVLRKIEDE 197
Query: 3296 LNFPPXXXXXXXXXXSRPQLESHAQSPGHSIHVNPKYLVEARQPFKHSRMEAS---NSEV 3126
L F P S ES + P H IHVNPKYL EARQ KH + + + +V
Sbjct: 198 LQFSPTENKQSSGMSSTRHSESPSSRPSHGIHVNPKYL-EARQQLKHPTLMCAADGHDKV 256
Query: 3125 NEELSSPERSSGSIRGSPKVWHEPIXXXXXXXXXXXXXSYIEHGYAPKSSTGYGESDYNI 2946
+ ER G K W S ++ Y KSS S+YNI
Sbjct: 257 HTTDFDGERMEGRASEGSKGWQGASPKFHDIEHVRGVSSSLQ-VYGKKSSMQC--SEYNI 313
Query: 2945 SPQRTRAGRSISPRMGIPNPHSPLARLRTTGRVGSPPRGAPMVRASSPPRLPSI---GRD 2775
+ R G+ SP T A MV P R I
Sbjct: 314 DHPEV-----LPARPGVARTGSPQTAATCT---------ASMVEVEGPTRQLKIKISRPS 359
Query: 2774 PSPSVSAGRGLPPPRTTFGRVNSPATSIGRRSEGAVETDNGWERPWSAKGEINYARPLD- 2598
P P + + + PP F R SP R S G R S G + RP D
Sbjct: 360 PPPIIGPRKSISPPVDRFSRDTSPRRMRERASPSHSGFVYGPGRGTSQNGWLERRRPFDD 419
Query: 2597 ---RVNPSIGYGHRNGYAWRPQVMPGALIDAYGNYRGQRSLTGPLSYLHPPQENDILSSS 2427
++ S+ + NGYA + LIDAYGNY G+ L + P + + ++S
Sbjct: 420 GAQQIQASMAFNLNNGYA---KQRSRELIDAYGNYTGKSFSLEKLPKV-PRLDVNSVASE 475
Query: 2426 RALSRNWRNSEEEEYSWENLSPRAGTHTR 2340
RA SR W+NSEEEEY WE++SP +R
Sbjct: 476 RA-SRKWKNSEEEEYVWEDMSPTLSDRSR 503
Score = 235 bits (600), Expect = 9e-60
Identities = 111/179 (62%), Positives = 137/179 (76%)
Frame = -3
Query: 863 PGPHFDDIGTEFSSDVLKTRHEHVLRSLYEDLPRQCTTCGLRFKLQEDHSNHMDWHVSRN 684
P D +G EF++++LK RHE V+ +LY DLPRQCTTCGLRFK QE+HS+HMDWHV++N
Sbjct: 884 PAQSQDSVGVEFNAELLKVRHESVINALYTDLPRQCTTCGLRFKCQEEHSSHMDWHVTKN 943
Query: 683 RTISKNRKQRVTQIHRKWFVSFKDWLSGTEATTSEVVPPFSPMEAVPXXXXXXELCVPAD 504
R +SKNRKQ+ + RKWFVS K+WLSG E ++VVP F P E V E+ VPAD
Sbjct: 944 R-MSKNRKQKPS---RKWFVSAKEWLSGAETLGNDVVPGFLPTETVTEKREDKEMAVPAD 999
Query: 503 EEQSLCALCGEPFEDFYSDERDEWMYKGAVYMNAPSGQYESIDKSQLGEIVHAKCRSDS 327
E Q++CALCGEPFEDFYSDE +EWMY+GAVY+ A G E +D+SQLG IVHAKCRS+S
Sbjct: 1000 ENQNVCALCGEPFEDFYSDEAEEWMYRGAVYLYARDGYTEGLDRSQLGPIVHAKCRSES 1058
>XP_006467998.1 PREDICTED: polyadenylation and cleavage factor homolog 4 isoform X5
[Citrus sinensis]
Length = 941
Score = 243 bits (620), Expect = 9e-63
Identities = 117/203 (57%), Positives = 148/203 (72%)
Frame = -3
Query: 857 PHFDDIGTEFSSDVLKTRHEHVLRSLYEDLPRQCTTCGLRFKLQEDHSNHMDWHVSRNRT 678
P D +G EF++D+ K RHE + SLY +LPRQCTTCGLRFK QE+HS+HMDWHV++NR
Sbjct: 742 PVQDSVGLEFNADLHKLRHESAISSLYANLPRQCTTCGLRFKCQEEHSSHMDWHVTKNR- 800
Query: 677 ISKNRKQRVTQIHRKWFVSFKDWLSGTEATTSEVVPPFSPMEAVPXXXXXXELCVPADEE 498
+SKNRKQ+ + RKWFVS WLSGTEA ++ +P F P E + E+ VPADE+
Sbjct: 801 MSKNRKQKPS---RKWFVSASMWLSGTEALGTDAIPGFLPAEPIVEKKDDEEMAVPADED 857
Query: 497 QSLCALCGEPFEDFYSDERDEWMYKGAVYMNAPSGQYESIDKSQLGEIVHAKCRSDSVGS 318
Q++CALCGEPF+DFYSDE +EWMYKGA+YMNAP+G E +++SQLG IVHAKCRS+S
Sbjct: 858 QNVCALCGEPFDDFYSDETEEWMYKGAIYMNAPNGSTEGMERSQLGPIVHAKCRSESTVI 917
Query: 317 TLDSREEDVDGSDNPGVRPKKAR 249
D + D GS G + KK R
Sbjct: 918 PSDDFKRDEGGSSEEGNQRKKLR 940
Score = 100 bits (248), Expect = 2e-17
Identities = 79/244 (32%), Positives = 104/244 (42%), Gaps = 6/244 (2%)
Frame = -3
Query: 3803 PNPSLSNNGNGVAAPVLANQQRGGALQEKFXXXXXXXXXXXXXXXXXXE------IIVLY 3642
P+PSL+ N A P Q+ + +KF I+ LY
Sbjct: 14 PSPSLAFTNNNKAMPNELAQKPSTPIIDKFRALLKLREAEARVGDGAGTTLSTNEIVQLY 73
Query: 3641 REALSELIFNSKPVITDLTIIAGELVHLAQDVANAVCNHVLEVPVDQKLPSLYLLDSIVK 3462
L+EL FNSKP+ITDLTIIAGE +A A+C +LEV
Sbjct: 74 ETVLAELTFNSKPIITDLTIIAGEQRAHGDGIAEAICTRILEV----------------- 116
Query: 3461 NIGGEYVKYFAARLPEVFIKSYQQVDPNLHHSMKRLFHTWRVVFPQVQLHLIEAELNFPP 3282
F ++Y+QV P+L+ +M+ LF TW VFPQ L IEAEL F
Sbjct: 117 -----------------FCEAYRQVHPDLYSAMQHLFGTWSTVFPQAVLRKIEAELQFSS 159
Query: 3281 XXXXXXXXXXSRPQLESHAQSPGHSIHVNPKYLVEARQPFKHSRMEASNSEVNEELSSPE 3102
S ES P H IHVNPKY+ + F+HS ++ V + S+P
Sbjct: 160 QVNKQSSNVNSLRASES--PRPTHGIHVNPKYI----RQFEHSNTDS----VGGQRSNPA 209
Query: 3101 RSSG 3090
S G
Sbjct: 210 GSVG 213
>XP_017645983.1 PREDICTED: polyadenylation and cleavage factor homolog 4 isoform X2
[Gossypium arboreum]
Length = 1001
Score = 244 bits (622), Expect = 1e-62
Identities = 117/179 (65%), Positives = 137/179 (76%)
Frame = -3
Query: 863 PGPHFDDIGTEFSSDVLKTRHEHVLRSLYEDLPRQCTTCGLRFKLQEDHSNHMDWHVSRN 684
P P D +G EF +D+LK RHE + +LY DLPRQCTTCGLRFK QE+HS HMDWHV+RN
Sbjct: 803 PTPIQDSVGLEFDADLLKVRHESAISALYADLPRQCTTCGLRFKFQEEHSTHMDWHVTRN 862
Query: 683 RTISKNRKQRVTQIHRKWFVSFKDWLSGTEATTSEVVPPFSPMEAVPXXXXXXELCVPAD 504
R +SKNRKQ+ + RKWFVS WLSG EA ++ VP F P E + EL VPAD
Sbjct: 863 R-MSKNRKQKPS---RKWFVSASMWLSGAEALGTDAVPGFLPTEDIVEKKDDEELAVPAD 918
Query: 503 EEQSLCALCGEPFEDFYSDERDEWMYKGAVYMNAPSGQYESIDKSQLGEIVHAKCRSDS 327
E+Q+LCALCGEPF+DFYSDE +EWMY+GAVYMNAPSG E ID+SQLG IVHAKCRS+S
Sbjct: 919 EDQNLCALCGEPFDDFYSDETEEWMYRGAVYMNAPSGSVEGIDRSQLGPIVHAKCRSES 977
Score = 196 bits (498), Expect = 2e-47
Identities = 159/449 (35%), Positives = 210/449 (46%), Gaps = 17/449 (3%)
Frame = -3
Query: 3656 IIVLYREALSELIFNSKPVITDLTIIAGELVHLAQDVANAVCNHVLEVPVDQKLPSLYLL 3477
I+ LY LSEL FNSKP+ITDLTIIAGE + +A+A+C ++EVPV+QKLPSLYLL
Sbjct: 49 IVQLYEVVLSELTFNSKPIITDLTIIAGEQREHGEGIADAICARIIEVPVEQKLPSLYLL 108
Query: 3476 DSIVKNIGGEYVKYFAARLPEVFIKSYQQVDPNLHHSMKRLFHTWRVVFPQVQLHLIEAE 3297
DSIVKNIG EYV+YF++RLPEVF ++Y+QV+PNLH +M+ LF TW VFP L IE +
Sbjct: 109 DSIVKNIGREYVRYFSSRLPEVFCEAYRQVNPNLHPAMRHLFGTWSTVFPPSVLRKIEMQ 168
Query: 3296 LNFPPXXXXXXXXXXSRPQLESHAQSPGHSIHVNPKYLVEARQPFKHSRMEASNSEVNEE 3117
L F S ES P H IHVNPKYL + E+
Sbjct: 169 LQFSQTGNQQSSGVTSLQSSES--PRPTHGIHVNPKYLRQL-----------------EQ 209
Query: 3116 LSSPERSSGSIRGSPKVWHEPIXXXXXXXXXXXXXSYIEHGYAPKSSTGYGESDYNISPQ 2937
S + ++ +RG + Y K + Y E D
Sbjct: 210 QSGADSNTQHVRGMSAG---------------------QKLYGQKHTIAYDEFD------ 242
Query: 2936 RTRAGRSISPRMGIPNPHSPLARLRTTGRVG--SPPRGAPMVRASSPPRLPSIGRDPSPS 2763
S +P+ H + RL +TG VG S GA + SS R + R SPS
Sbjct: 243 --------SDHTEVPSSHVGVQRLSSTGNVGRTSLAIGANKSQLSSASR---VSRPFSPS 291
Query: 2762 -VSAGRGL----------PPPRTTFGRVNSPAT----SIGRRSEGAVETDNGWERPWSAK 2628
+ + R L PR F V SP+ G R G + + R W K
Sbjct: 292 RIGSDRLLSSEIDDLPSDDSPR-RFAEVASPSRPPVFDFG-RGRGTIRDEE--TREWPRK 347
Query: 2627 GEINYARPLDRVNPSIGYGHRNGYAWRPQVMPGALIDAYGNYRGQRSLTGPLSYLHPPQE 2448
R + + Y NG + ALIDAYGN RGQ +
Sbjct: 348 HFYGDYRNCSESSLN-AYKLSNG---NERQTLRALIDAYGNDRGQGMSNSKPVQVERLDL 403
Query: 2447 NDILSSSRALSRNWRNSEEEEYSWENLSP 2361
N + ++ R+W+N+EEEE+ WE++SP
Sbjct: 404 NGM--GNKVTPRSWQNTEEEEFDWEDMSP 430
>XP_017645981.1 PREDICTED: polyadenylation and cleavage factor homolog 4 isoform X1
[Gossypium arboreum] KHG24664.1 Pre-mRNA cleavage complex
2 Pcf11 [Gossypium arboreum]
Length = 1004
Score = 244 bits (622), Expect = 1e-62
Identities = 117/179 (65%), Positives = 137/179 (76%)
Frame = -3
Query: 863 PGPHFDDIGTEFSSDVLKTRHEHVLRSLYEDLPRQCTTCGLRFKLQEDHSNHMDWHVSRN 684
P P D +G EF +D+LK RHE + +LY DLPRQCTTCGLRFK QE+HS HMDWHV+RN
Sbjct: 803 PTPIQDSVGLEFDADLLKVRHESAISALYADLPRQCTTCGLRFKFQEEHSTHMDWHVTRN 862
Query: 683 RTISKNRKQRVTQIHRKWFVSFKDWLSGTEATTSEVVPPFSPMEAVPXXXXXXELCVPAD 504
R +SKNRKQ+ + RKWFVS WLSG EA ++ VP F P E + EL VPAD
Sbjct: 863 R-MSKNRKQKPS---RKWFVSASMWLSGAEALGTDAVPGFLPTEDIVEKKDDEELAVPAD 918
Query: 503 EEQSLCALCGEPFEDFYSDERDEWMYKGAVYMNAPSGQYESIDKSQLGEIVHAKCRSDS 327
E+Q+LCALCGEPF+DFYSDE +EWMY+GAVYMNAPSG E ID+SQLG IVHAKCRS+S
Sbjct: 919 EDQNLCALCGEPFDDFYSDETEEWMYRGAVYMNAPSGSVEGIDRSQLGPIVHAKCRSES 977
Score = 196 bits (498), Expect = 2e-47
Identities = 159/449 (35%), Positives = 210/449 (46%), Gaps = 17/449 (3%)
Frame = -3
Query: 3656 IIVLYREALSELIFNSKPVITDLTIIAGELVHLAQDVANAVCNHVLEVPVDQKLPSLYLL 3477
I+ LY LSEL FNSKP+ITDLTIIAGE + +A+A+C ++EVPV+QKLPSLYLL
Sbjct: 49 IVQLYEVVLSELTFNSKPIITDLTIIAGEQREHGEGIADAICARIIEVPVEQKLPSLYLL 108
Query: 3476 DSIVKNIGGEYVKYFAARLPEVFIKSYQQVDPNLHHSMKRLFHTWRVVFPQVQLHLIEAE 3297
DSIVKNIG EYV+YF++RLPEVF ++Y+QV+PNLH +M+ LF TW VFP L IE +
Sbjct: 109 DSIVKNIGREYVRYFSSRLPEVFCEAYRQVNPNLHPAMRHLFGTWSTVFPPSVLRKIEMQ 168
Query: 3296 LNFPPXXXXXXXXXXSRPQLESHAQSPGHSIHVNPKYLVEARQPFKHSRMEASNSEVNEE 3117
L F S ES P H IHVNPKYL + E+
Sbjct: 169 LQFSQTGNQQSSGVTSLQSSES--PRPTHGIHVNPKYLRQL-----------------EQ 209
Query: 3116 LSSPERSSGSIRGSPKVWHEPIXXXXXXXXXXXXXSYIEHGYAPKSSTGYGESDYNISPQ 2937
S + ++ +RG + Y K + Y E D
Sbjct: 210 QSGADSNTQHVRGMSAG---------------------QKLYGQKHTIAYDEFD------ 242
Query: 2936 RTRAGRSISPRMGIPNPHSPLARLRTTGRVG--SPPRGAPMVRASSPPRLPSIGRDPSPS 2763
S +P+ H + RL +TG VG S GA + SS R + R SPS
Sbjct: 243 --------SDHTEVPSSHVGVQRLSSTGNVGRTSLAIGANKSQLSSASR---VSRPFSPS 291
Query: 2762 -VSAGRGL----------PPPRTTFGRVNSPAT----SIGRRSEGAVETDNGWERPWSAK 2628
+ + R L PR F V SP+ G R G + + R W K
Sbjct: 292 RIGSDRLLSSEIDDLPSDDSPR-RFAEVASPSRPPVFDFG-RGRGTIRDEE--TREWPRK 347
Query: 2627 GEINYARPLDRVNPSIGYGHRNGYAWRPQVMPGALIDAYGNYRGQRSLTGPLSYLHPPQE 2448
R + + Y NG + ALIDAYGN RGQ +
Sbjct: 348 HFYGDYRNCSESSLN-AYKLSNG---NERQTLRALIDAYGNDRGQGMSNSKPVQVERLDL 403
Query: 2447 NDILSSSRALSRNWRNSEEEEYSWENLSP 2361
N + ++ R+W+N+EEEE+ WE++SP
Sbjct: 404 NGM--GNKVTPRSWQNTEEEEFDWEDMSP 430
>XP_018849825.1 PREDICTED: polyadenylation and cleavage factor homolog 4-like isoform
X2 [Juglans regia]
Length = 1018
Score = 244 bits (622), Expect = 1e-62
Identities = 119/205 (58%), Positives = 145/205 (70%)
Frame = -3
Query: 863 PGPHFDDIGTEFSSDVLKTRHEHVLRSLYEDLPRQCTTCGLRFKLQEDHSNHMDWHVSRN 684
P P D +G EF+ D+LK RHE + SLY DLPRQCTTCGLRFK QE+HS+HMDWHV++N
Sbjct: 816 PTPIQDSVGVEFNVDLLKVRHETAISSLYADLPRQCTTCGLRFKCQEEHSSHMDWHVTKN 875
Query: 683 RTISKNRKQRVTQIHRKWFVSFKDWLSGTEATTSEVVPPFSPMEAVPXXXXXXELCVPAD 504
R +SKNRKQ+ + RKWFVS WLSG EA +E VP F P E + E+ VPAD
Sbjct: 876 R-MSKNRKQKPS---RKWFVSSSMWLSGAEALGTEAVPGFLPTEIIVEKKDDEEMAVPAD 931
Query: 503 EEQSLCALCGEPFEDFYSDERDEWMYKGAVYMNAPSGQYESIDKSQLGEIVHAKCRSDSV 324
E+Q+ CALCGEPF+DFYSDE +EWMYKGAVY+NAP G +D+SQLG IVHAKCRS+S
Sbjct: 932 EDQNACALCGEPFDDFYSDETEEWMYKGAVYLNAPCGSTAGMDRSQLGPIVHAKCRSESS 991
Query: 323 GSTLDSREEDVDGSDNPGVRPKKAR 249
+ D +D G G + K+ R
Sbjct: 992 AVSTDGYRQDEGGITAEGSQSKRMR 1016
Score = 210 bits (534), Expect = 9e-52
Identities = 211/725 (29%), Positives = 302/725 (41%), Gaps = 74/725 (10%)
Frame = -3
Query: 3656 IIVLYREALSELIFNSKPVITDLTIIAGELVHLAQDVANAVCNHVLEVPVDQKLPSLYLL 3477
I+ LY LSEL FNSKP+ITDLTIIAGE L + +A+A+C +LE PV+QKLPSLYLL
Sbjct: 71 IVQLYDLLLSELTFNSKPIITDLTIIAGEHKELGKGIADAICARILEAPVEQKLPSLYLL 130
Query: 3476 DSIVKNIGGEYVKYFAARLPEVFIKSYQQVDPNLHHSMKRLFHTWRVVFPQVQLHLIEAE 3297
DSIVKNIG +YV YF++RLPEVF ++Y+QV PN ++SM+ LF TW VFP LH IE +
Sbjct: 131 DSIVKNIGRDYVTYFSSRLPEVFCEAYRQVHPNQYNSMRHLFGTWSAVFPPSVLHKIEVQ 190
Query: 3296 LNFPPXXXXXXXXXXSRPQLESHAQSPGHSIHVNPKYLVEARQPFKHSRMEASNSEVNEE 3117
L F P P S + P H IHVNPKYL + F+HS ++++ +
Sbjct: 191 LQFSP--LVNQQSSGLNPLRASESPRPSHGIHVNPKYL----RQFEHSAVDSNIQQA--- 241
Query: 3116 LSSPERSSGSIRGSPKVWHEPIXXXXXXXXXXXXXSYIEHGYAPKSSTGYGESDYNISPQ 2937
RG+ V + K + G+ E D
Sbjct: 242 -----------RGTSAV----------------------KMFGKKPAIGFDEFD------ 262
Query: 2936 RTRAGRSISPRMGIPNPHSPLARLRTTGRVGSPP--RGAPMVRASSPPRLPSIGRDPSPS 2763
+ + ++G RL +TG G+ P GA VR PP +GR SPS
Sbjct: 263 -SGQAELVPSQVG-------AERLSSTGNAGNAPFTFGANKVR---PPSTIRLGRPSSPS 311
Query: 2762 -VSAGRGLPPPRTTFGRVNSPATSIG-------------RRSEGAVETDNGWERPWSAKG 2625
R L F +SP +G R+ E +G +R +
Sbjct: 312 RTRPDRSLSLAVEEFAADHSPRRFVGGGSPAHPIYEYGLSRATARDEEMSGRQRKHYSDN 371
Query: 2624 EINYARPLDRVNPSIGYGHRNGYAWRPQVMPGALIDAYGNYRGQRSLTG-PLSYLHPPQE 2448
+ N+ N S G H+ P ALIDAYGN G+RS PL Q
Sbjct: 372 KHNHFETKLLHNLSNGREHQG---------PRALIDAYGNDTGKRSFNNKPLQ----GQR 418
Query: 2447 NDILS-SSRALSRNWRNSEEEEYSWENLSPRAGTHTR----------GIDESRKEDVYVG 2301
D+ S ++ + +W+ +EEEE+ WE++SP R GI + G
Sbjct: 419 LDLNSIDNKVATPSWQTTEEEEFDWEDMSPTLADSNRSNDFLPRTRPGIGVQSASALNAG 478
Query: 2300 E-KLPVVD---VN-------------------------NRMDIDSADSDEWHMPSSLSHS 2208
+ +LP VD VN N++ D W++P LS
Sbjct: 479 QAQLPAVDDASVNAEDSVPLLSFGHGSMRKISGFQAERNQIIDPRYPQDPWNLPPHLSKG 538
Query: 2207 ERQDTFKESLPQRESESQPYNFSQ--PGIPSGNKEALSELPSAMQESSLGNRTTGGRP-- 2040
++ L R S S +P + + + S S+L + + RP
Sbjct: 539 RGRNYNLPLLASRISSSDIDKMPSLIDKLPDADPQLHGTIISRFGSSNLDSISVEARPTV 598
Query: 2039 --------QSILYHNHNSVLQQNIKSYPHVQGNVSMSNSTYGYGKPSSLENDSKIGNTTN 1884
S+ HN Q+I V G S +T ++L + +
Sbjct: 599 LPASRGVRPSLNVHNSRPPYLQHIFPRQRVMGGQFESINT--SNAVNNLRPNGSLHMPEL 656
Query: 1883 LSFGKHSKPASNAQ--QFTAESGGSDNIPPMN---ASPSQMSFQRQQPVQKSLSPSLVPQ 1719
S G ++ S+A+ Q + G ++ N +P + F Q SL+ + P
Sbjct: 657 QSDGFRNRELSSAKLPQLPNQHAGLIHVTQRNQVQGTPLRPQFLPSQEAHPSLAAVVQPH 716
Query: 1718 SVRPP 1704
V PP
Sbjct: 717 LVAPP 721
>XP_018849824.1 PREDICTED: polyadenylation and cleavage factor homolog 4-like isoform
X1 [Juglans regia]
Length = 1019
Score = 244 bits (622), Expect = 1e-62
Identities = 119/205 (58%), Positives = 145/205 (70%)
Frame = -3
Query: 863 PGPHFDDIGTEFSSDVLKTRHEHVLRSLYEDLPRQCTTCGLRFKLQEDHSNHMDWHVSRN 684
P P D +G EF+ D+LK RHE + SLY DLPRQCTTCGLRFK QE+HS+HMDWHV++N
Sbjct: 817 PTPIQDSVGVEFNVDLLKVRHETAISSLYADLPRQCTTCGLRFKCQEEHSSHMDWHVTKN 876
Query: 683 RTISKNRKQRVTQIHRKWFVSFKDWLSGTEATTSEVVPPFSPMEAVPXXXXXXELCVPAD 504
R +SKNRKQ+ + RKWFVS WLSG EA +E VP F P E + E+ VPAD
Sbjct: 877 R-MSKNRKQKPS---RKWFVSSSMWLSGAEALGTEAVPGFLPTEIIVEKKDDEEMAVPAD 932
Query: 503 EEQSLCALCGEPFEDFYSDERDEWMYKGAVYMNAPSGQYESIDKSQLGEIVHAKCRSDSV 324
E+Q+ CALCGEPF+DFYSDE +EWMYKGAVY+NAP G +D+SQLG IVHAKCRS+S
Sbjct: 933 EDQNACALCGEPFDDFYSDETEEWMYKGAVYLNAPCGSTAGMDRSQLGPIVHAKCRSESS 992
Query: 323 GSTLDSREEDVDGSDNPGVRPKKAR 249
+ D +D G G + K+ R
Sbjct: 993 AVSTDGYRQDEGGITAEGSQSKRMR 1017
Score = 209 bits (533), Expect = 1e-51
Identities = 211/726 (29%), Positives = 302/726 (41%), Gaps = 75/726 (10%)
Frame = -3
Query: 3656 IIVLYREALSELIFNSKPVITDLTIIAGELVHLAQDVANAVCNHVLEVPVDQKLPSLYLL 3477
I+ LY LSEL FNSKP+ITDLTIIAGE L + +A+A+C +LE PV+QKLPSLYLL
Sbjct: 71 IVQLYDLLLSELTFNSKPIITDLTIIAGEHKELGKGIADAICARILEAPVEQKLPSLYLL 130
Query: 3476 DSIVKNIGGEYVKYFAARLPEVFIKSYQQVDPNLHHSMKRLFHTWRVVFPQVQLHLIEAE 3297
DSIVKNIG +YV YF++RLPEVF ++Y+QV PN ++SM+ LF TW VFP LH IE +
Sbjct: 131 DSIVKNIGRDYVTYFSSRLPEVFCEAYRQVHPNQYNSMRHLFGTWSAVFPPSVLHKIEVQ 190
Query: 3296 LNFPPXXXXXXXXXXSRPQLESHAQSPGHSIHVNPKYLVEARQPFKHSRMEASNSEVNEE 3117
L F P P S + P H IHVNPKYL + F+HS ++++ +
Sbjct: 191 LQFSP--LVNQQSSGLNPLRASESPRPSHGIHVNPKYL----RQFEHSAVDSNIQQA--- 241
Query: 3116 LSSPERSSGSIRGSPKVWHEPIXXXXXXXXXXXXXSYIEHGYAPKSSTGYGESDYNISPQ 2937
RG+ V + K + G+ E D
Sbjct: 242 -----------RGTSAV----------------------KMFGKKPAIGFDEFD------ 262
Query: 2936 RTRAGRSISPRMGIPNPHSPLARLRTTGRVGSPP--RGAPMVRASSPPRLPSIGRDPSPS 2763
+ + ++G RL +TG G+ P GA VR PP +GR SPS
Sbjct: 263 -SGQAELVPSQVG-------AERLSSTGNAGNAPFTFGANKVR---PPSTIRLGRPSSPS 311
Query: 2762 -VSAGRGLPPPRTTFGRVNSPATSIG-------------RRSEGAVETDNGWERPWSAKG 2625
R L F +SP +G R+ E +G +R +
Sbjct: 312 RTRPDRSLSLAVEEFAADHSPRRFVGGGSPAHPIYEYGLSRATARDEEMSGRQRKHYSDN 371
Query: 2624 EINYARPLDRVNPSIGYGHRNGYAWRPQVMPGALIDAYGNYRGQRSLTG-PLSYLHPPQE 2448
+ N+ N S G H+ P ALIDAYGN G+RS PL Q
Sbjct: 372 KHNHFETKLLHNLSNGREHQG---------PRALIDAYGNDTGKRSFNNKPLQ----GQR 418
Query: 2447 NDILS-SSRALSRNWRNSEEEEYSWENLSPRAGTHTR----------GIDESRKEDVYVG 2301
D+ S ++ + +W+ +EEEE+ WE++SP R GI + G
Sbjct: 419 LDLNSIDNKVATPSWQTTEEEEFDWEDMSPTLADSNRSNDFLPRTRPGIGVQSASALNAG 478
Query: 2300 E-KLPVVD---VN--------------------------NRMDIDSADSDEWHMPSSLSH 2211
+ +LP VD VN N++ D W++P LS
Sbjct: 479 QAQLPAVDDASVNAEDSVPLLSQFGHGSMRKISGFQAERNQIIDPRYPQDPWNLPPHLSK 538
Query: 2210 SERQDTFKESLPQRESESQPYNFSQ--PGIPSGNKEALSELPSAMQESSLGNRTTGGRP- 2040
++ L R S S +P + + + S S+L + + RP
Sbjct: 539 GRGRNYNLPLLASRISSSDIDKMPSLIDKLPDADPQLHGTIISRFGSSNLDSISVEARPT 598
Query: 2039 ---------QSILYHNHNSVLQQNIKSYPHVQGNVSMSNSTYGYGKPSSLENDSKIGNTT 1887
S+ HN Q+I V G S +T ++L + +
Sbjct: 599 VLPASRGVRPSLNVHNSRPPYLQHIFPRQRVMGGQFESINT--SNAVNNLRPNGSLHMPE 656
Query: 1886 NLSFGKHSKPASNAQ--QFTAESGGSDNIPPMN---ASPSQMSFQRQQPVQKSLSPSLVP 1722
S G ++ S+A+ Q + G ++ N +P + F Q SL+ + P
Sbjct: 657 LQSDGFRNRELSSAKLPQLPNQHAGLIHVTQRNQVQGTPLRPQFLPSQEAHPSLAAVVQP 716
Query: 1721 QSVRPP 1704
V PP
Sbjct: 717 HLVAPP 722
>XP_016683610.1 PREDICTED: polyadenylation and cleavage factor homolog 4-like isoform
X3 [Gossypium hirsutum]
Length = 826
Score = 241 bits (614), Expect = 1e-62
Identities = 116/179 (64%), Positives = 136/179 (75%)
Frame = -3
Query: 863 PGPHFDDIGTEFSSDVLKTRHEHVLRSLYEDLPRQCTTCGLRFKLQEDHSNHMDWHVSRN 684
P P D +G EF +D+LK RHE + +LY DLPRQCTTCGLRFK QE+HS HMDWHV+RN
Sbjct: 605 PTPIQDSVGLEFDADLLKVRHESAISALYADLPRQCTTCGLRFKFQEEHSTHMDWHVTRN 664
Query: 683 RTISKNRKQRVTQIHRKWFVSFKDWLSGTEATTSEVVPPFSPMEAVPXXXXXXELCVPAD 504
R +SKNRKQ+ + RKWFVS WLSG EA ++ VP F P E + EL V AD
Sbjct: 665 R-MSKNRKQKPS---RKWFVSASMWLSGAEALGTDAVPGFLPTEDIVEKKDDEELAVSAD 720
Query: 503 EEQSLCALCGEPFEDFYSDERDEWMYKGAVYMNAPSGQYESIDKSQLGEIVHAKCRSDS 327
E+Q+LCALCGEPF+DFYSDE +EWMY+GAVYMNAPSG E ID+SQLG IVHAKCRS+S
Sbjct: 721 EDQNLCALCGEPFDDFYSDETEEWMYRGAVYMNAPSGSVEGIDRSQLGPIVHAKCRSES 779
>XP_006467996.1 PREDICTED: polyadenylation and cleavage factor homolog 4 isoform X2
[Citrus sinensis] XP_006467997.1 PREDICTED:
polyadenylation and cleavage factor homolog 4 isoform X3
[Citrus sinensis] XP_015382499.1 PREDICTED:
polyadenylation and cleavage factor homolog 4 isoform X4
[Citrus sinensis]
Length = 975
Score = 243 bits (620), Expect = 1e-62
Identities = 117/203 (57%), Positives = 148/203 (72%)
Frame = -3
Query: 857 PHFDDIGTEFSSDVLKTRHEHVLRSLYEDLPRQCTTCGLRFKLQEDHSNHMDWHVSRNRT 678
P D +G EF++D+ K RHE + SLY +LPRQCTTCGLRFK QE+HS+HMDWHV++NR
Sbjct: 776 PVQDSVGLEFNADLHKLRHESAISSLYANLPRQCTTCGLRFKCQEEHSSHMDWHVTKNR- 834
Query: 677 ISKNRKQRVTQIHRKWFVSFKDWLSGTEATTSEVVPPFSPMEAVPXXXXXXELCVPADEE 498
+SKNRKQ+ + RKWFVS WLSGTEA ++ +P F P E + E+ VPADE+
Sbjct: 835 MSKNRKQKPS---RKWFVSASMWLSGTEALGTDAIPGFLPAEPIVEKKDDEEMAVPADED 891
Query: 497 QSLCALCGEPFEDFYSDERDEWMYKGAVYMNAPSGQYESIDKSQLGEIVHAKCRSDSVGS 318
Q++CALCGEPF+DFYSDE +EWMYKGA+YMNAP+G E +++SQLG IVHAKCRS+S
Sbjct: 892 QNVCALCGEPFDDFYSDETEEWMYKGAIYMNAPNGSTEGMERSQLGPIVHAKCRSESTVI 951
Query: 317 TLDSREEDVDGSDNPGVRPKKAR 249
D + D GS G + KK R
Sbjct: 952 PSDDFKRDEGGSSEEGNQRKKLR 974
Score = 169 bits (429), Expect = 4e-39
Identities = 105/244 (43%), Positives = 134/244 (54%), Gaps = 6/244 (2%)
Frame = -3
Query: 3803 PNPSLSNNGNGVAAPVLANQQRGGALQEKFXXXXXXXXXXXXXXXXXXE------IIVLY 3642
P+PSL+ N A P Q+ + +KF I+ LY
Sbjct: 14 PSPSLAFTNNNKAMPNELAQKPSTPIIDKFRALLKLREAEARVGDGAGTTLSTNEIVQLY 73
Query: 3641 REALSELIFNSKPVITDLTIIAGELVHLAQDVANAVCNHVLEVPVDQKLPSLYLLDSIVK 3462
L+EL FNSKP+ITDLTIIAGE +A A+C +LE PV+ KLPSLYLLDSIVK
Sbjct: 74 ETVLAELTFNSKPIITDLTIIAGEQRAHGDGIAEAICTRILEAPVNHKLPSLYLLDSIVK 133
Query: 3461 NIGGEYVKYFAARLPEVFIKSYQQVDPNLHHSMKRLFHTWRVVFPQVQLHLIEAELNFPP 3282
NI EYV+YF++RLPEVF ++Y+QV P+L+ +M+ LF TW VFPQ L IEAEL F
Sbjct: 134 NINKEYVRYFSSRLPEVFCEAYRQVHPDLYSAMQHLFGTWSTVFPQAVLRKIEAELQFSS 193
Query: 3281 XXXXXXXXXXSRPQLESHAQSPGHSIHVNPKYLVEARQPFKHSRMEASNSEVNEELSSPE 3102
S ES P H IHVNPKY+ + F+HS ++ V + S+P
Sbjct: 194 QVNKQSSNVNSLRASES--PRPTHGIHVNPKYI----RQFEHSNTDS----VGGQRSNPA 243
Query: 3101 RSSG 3090
S G
Sbjct: 244 GSVG 247
>XP_008462986.1 PREDICTED: polyadenylation and cleavage factor homolog 4 isoform X2
[Cucumis melo]
Length = 1007
Score = 243 bits (621), Expect = 1e-62
Identities = 128/241 (53%), Positives = 157/241 (65%)
Frame = -3
Query: 971 SQQVDNPAKVSAVSTLASTISVNCSNDLPRPPFINGPGPHFDDIGTEFSSDVLKTRHEHV 792
SQ+V +A+S L S++ L N D +G EF+ DVLK RHE
Sbjct: 776 SQKVPGQQPGTAISGLISSLMARGLISL------NNQASVQDSVGLEFNPDVLKVRHESA 829
Query: 791 LRSLYEDLPRQCTTCGLRFKLQEDHSNHMDWHVSRNRTISKNRKQRVTQIHRKWFVSFKD 612
+ +LY DLPRQC TCGLRFK QE+HSNHMDWHV++NR +SK+RKQ+ + RKWFVS
Sbjct: 830 ITALYADLPRQCMTCGLRFKTQEEHSNHMDWHVTKNR-MSKSRKQKPS---RKWFVSISM 885
Query: 611 WLSGTEATTSEVVPPFSPMEAVPXXXXXXELCVPADEEQSLCALCGEPFEDFYSDERDEW 432
WLSG EA +E VP F P E V EL VPADE+Q CALCGEPFEDFYSDE +EW
Sbjct: 886 WLSGAEALGTEAVPGFLPAEVVVEKKDDEELAVPADEDQKTCALCGEPFEDFYSDETEEW 945
Query: 431 MYKGAVYMNAPSGQYESIDKSQLGEIVHAKCRSDSVGSTLDSREEDVDGSDNPGVRPKKA 252
MY+GAVYMNAP GQ +D+SQLG IVHAKCR+++ +S ++D G G R K+
Sbjct: 946 MYRGAVYMNAPDGQTAGMDRSQLGPIVHAKCRTETNVVPSESFDQDEGGVSEDGNRRKRL 1005
Query: 251 R 249
R
Sbjct: 1006 R 1006
Score = 191 bits (485), Expect = 8e-46
Identities = 178/596 (29%), Positives = 257/596 (43%), Gaps = 34/596 (5%)
Frame = -3
Query: 3656 IIVLYREALSELIFNSKPVITDLTIIAGELVHLAQDVANAVCNHVLEVPVDQKLPSLYLL 3477
I+ LY LSEL FNSKP+ITDLT++A E + +A+ +C +LEVPVDQKLPSLYLL
Sbjct: 79 IVQLYDLMLSELTFNSKPIITDLTVLADEQREHGKGIADLICARILEVPVDQKLPSLYLL 138
Query: 3476 DSIVKNIGGEYVKYFAARLPEVFIKSYQQVDPNLHHSMKRLFHTWRVVFPQVQLHLIEAE 3297
DSIVKN+G EY+ YF++RLPEVF ++Y+QV PNLH++M+ LF TW VFP + IEA+
Sbjct: 139 DSIVKNVGHEYISYFSSRLPEVFCEAYRQVHPNLHNAMRHLFGTWATVFPPSIIRKIEAQ 198
Query: 3296 LNFPPXXXXXXXXXXSRPQLESHAQSPGHSIHVNPKYLVEARQPFKHSRMEASNSEVNEE 3117
L+ S + P H IHVNPKYL + +HS V ++
Sbjct: 199 LS----QLTAQESSGLTSSRASESPRPTHGIHVNPKYL----RQLEHS--------VVDK 242
Query: 3116 LSSPERSSGSIRGSPKVWHEPIXXXXXXXXXXXXXSYIEHGYAPKSSTGYGESDYNISPQ 2937
+ R + +I+ K K ++GY E DY+ +
Sbjct: 243 HTQDSRGTSAIKVHDK----------------------------KLASGYEEYDYDHADA 274
Query: 2936 RTRAGRSISPRMGIPNPHSPLARLRTTGRVGSPPRGAPMVRASSPPRLPSIGRDPSPSVS 2757
G MG S +G+ + ++S R IG P S
Sbjct: 275 LEHGGAQEFHSMGSMGHDS--------FSLGTNKANVKLAKSSLSSR---IGHH-RPLQS 322
Query: 2756 AGRGLPPPRTTFGRVNSPATSI----GRRSEGAVETDNGWERPWSAKGEINYARPLDRVN 2589
G L R SP+ ++ G + E N W R +N +
Sbjct: 323 LGDELESVRA------SPSQNVYDYEGSKILDRNEDTNKWRRKQYPDDNMN------GLE 370
Query: 2588 PSIGYGHRNGYAWRPQVMPGALIDAYGNYRGQRSLTGPLSYLHPPQENDILSS---SRAL 2418
+ Y RNG+A P ALI+AYG+ +G+ L +PPQ S ++A
Sbjct: 371 NTSSYNIRNGHALEG---PRALIEAYGSDKGKGYLND-----NPPQAEHFSISGIDNKAT 422
Query: 2417 SRNWRNSEEEEYSWENLSPRAGTHTR------------------GIDESRKEDVYVGEK- 2295
W+N+EEEE+ WE++SP R G + S + G +
Sbjct: 423 PVTWQNTEEEEFDWEDMSPTLADRGRNNDMLKPTVPPSRFRTRSGFERSNAMPIEPGMRS 482
Query: 2294 -------LPVVDVNNRM-DIDSADSDEWHMPSSLSHSERQDTFKESLPQRESESQPYNFS 2139
LP +D + + D+ + D W M + +S + Q+ P R NF
Sbjct: 483 NWSSQVQLPGIDSSIVIEDVVHSTPDIWKMHNHISQTS-QNLMNNKGPGR-------NFQ 534
Query: 2138 QPGIPSGNKEALSELPSAMQESSLGNRTTGGRPQSILYHNHNSVLQQNIKSYPHVQ 1971
P + G + E S + L N RP +I +S L N++S VQ
Sbjct: 535 MPMLGRGITSSGGEKMSPYGDKLLTNDAL-HRPTNIASRLGSSGLDSNMESQSIVQ 589
>XP_008462960.1 PREDICTED: polyadenylation and cleavage factor homolog 4 isoform X1
[Cucumis melo] XP_008462968.1 PREDICTED: polyadenylation
and cleavage factor homolog 4 isoform X1 [Cucumis melo]
Length = 1012
Score = 243 bits (621), Expect = 1e-62
Identities = 128/241 (53%), Positives = 157/241 (65%)
Frame = -3
Query: 971 SQQVDNPAKVSAVSTLASTISVNCSNDLPRPPFINGPGPHFDDIGTEFSSDVLKTRHEHV 792
SQ+V +A+S L S++ L N D +G EF+ DVLK RHE
Sbjct: 781 SQKVPGQQPGTAISGLISSLMARGLISL------NNQASVQDSVGLEFNPDVLKVRHESA 834
Query: 791 LRSLYEDLPRQCTTCGLRFKLQEDHSNHMDWHVSRNRTISKNRKQRVTQIHRKWFVSFKD 612
+ +LY DLPRQC TCGLRFK QE+HSNHMDWHV++NR +SK+RKQ+ + RKWFVS
Sbjct: 835 ITALYADLPRQCMTCGLRFKTQEEHSNHMDWHVTKNR-MSKSRKQKPS---RKWFVSISM 890
Query: 611 WLSGTEATTSEVVPPFSPMEAVPXXXXXXELCVPADEEQSLCALCGEPFEDFYSDERDEW 432
WLSG EA +E VP F P E V EL VPADE+Q CALCGEPFEDFYSDE +EW
Sbjct: 891 WLSGAEALGTEAVPGFLPAEVVVEKKDDEELAVPADEDQKTCALCGEPFEDFYSDETEEW 950
Query: 431 MYKGAVYMNAPSGQYESIDKSQLGEIVHAKCRSDSVGSTLDSREEDVDGSDNPGVRPKKA 252
MY+GAVYMNAP GQ +D+SQLG IVHAKCR+++ +S ++D G G R K+
Sbjct: 951 MYRGAVYMNAPDGQTAGMDRSQLGPIVHAKCRTETNVVPSESFDQDEGGVSEDGNRRKRL 1010
Query: 251 R 249
R
Sbjct: 1011 R 1011
Score = 192 bits (488), Expect = 4e-46
Identities = 179/597 (29%), Positives = 257/597 (43%), Gaps = 35/597 (5%)
Frame = -3
Query: 3656 IIVLYREALSELIFNSKPVITDLTIIAGELVHLAQDVANAVCNHVLEVPVDQKLPSLYLL 3477
I+ LY LSEL FNSKP+ITDLT++A E + +A+ +C +LEVPVDQKLPSLYLL
Sbjct: 79 IVQLYDLMLSELTFNSKPIITDLTVLADEQREHGKGIADLICARILEVPVDQKLPSLYLL 138
Query: 3476 DSIVKNIGGEYVKYFAARLPEVFIKSYQQVDPNLHHSMKRLFHTWRVVFPQVQLHLIEAE 3297
DSIVKN+G EY+ YF++RLPEVF ++Y+QV PNLH++M+ LF TW VFP + IEA+
Sbjct: 139 DSIVKNVGHEYISYFSSRLPEVFCEAYRQVHPNLHNAMRHLFGTWATVFPPSIIRKIEAQ 198
Query: 3296 LNFPPXXXXXXXXXXSRPQLESHAQSPGHSIHVNPKYLVEARQPFKHSRMEASNSEVNEE 3117
L+ S + P H IHVNPKYL + +HS V ++
Sbjct: 199 LS----QLTAQESSGLTSSRASESPRPTHGIHVNPKYL----RQLEHS--------VVDK 242
Query: 3116 LSSPERSSGSIRGSPKVWHEPIXXXXXXXXXXXXXSYIEHGYAPK--SSTGYGESDYNIS 2943
L + + + S S H+ +EHG A + S G +++
Sbjct: 243 LLALQHTQDSRGTSAIKVHDKKLASGYEEYDYDHADALEHGGAQEFHSMGSMGHDSFSLG 302
Query: 2942 PQRTR---AGRSISPRMGIPNPHSPLARLRTTGRVGSPPRGAPMVRASSPPRLPSIGRDP 2772
+ A S+S R+G H PL L L S+ P
Sbjct: 303 TNKANVKLAKSSLSSRIG---HHRPLQSL--------------------GDELESVRASP 339
Query: 2771 SPSVSAGRGLPPPRTTFGRVNSPATSIGRRSEGAVETDNGWERPWSAKGEINYARPLDRV 2592
S +V G + I R+E N W R +N +
Sbjct: 340 SQNVYDYEG---------------SKILDRNEDT----NKWRRKQYPDDNMN------GL 374
Query: 2591 NPSIGYGHRNGYAWRPQVMPGALIDAYGNYRGQRSLTGPLSYLHPPQENDILSS---SRA 2421
+ Y RNG+A P ALI+AYG+ +G+ L +PPQ S ++A
Sbjct: 375 ENTSSYNIRNGHALEG---PRALIEAYGSDKGKGYLND-----NPPQAEHFSISGIDNKA 426
Query: 2420 LSRNWRNSEEEEYSWENLSPRAGTHTR------------------GIDESRKEDVYVGEK 2295
W+N+EEEE+ WE++SP R G + S + G +
Sbjct: 427 TPVTWQNTEEEEFDWEDMSPTLADRGRNNDMLKPTVPPSRFRTRSGFERSNAMPIEPGMR 486
Query: 2294 --------LPVVDVNNRM-DIDSADSDEWHMPSSLSHSERQDTFKESLPQRESESQPYNF 2142
LP +D + + D+ + D W M + +S + Q+ P R NF
Sbjct: 487 SNWSSQVQLPGIDSSIVIEDVVHSTPDIWKMHNHISQTS-QNLMNNKGPGR-------NF 538
Query: 2141 SQPGIPSGNKEALSELPSAMQESSLGNRTTGGRPQSILYHNHNSVLQQNIKSYPHVQ 1971
P + G + E S + L N RP +I +S L N++S VQ
Sbjct: 539 QMPMLGRGITSSGGEKMSPYGDKLLTNDAL-HRPTNIASRLGSSGLDSNMESQSIVQ 594
>KJB67159.1 hypothetical protein B456_010G178200 [Gossypium raimondii]
Length = 980
Score = 243 bits (619), Expect = 2e-62
Identities = 116/179 (64%), Positives = 137/179 (76%)
Frame = -3
Query: 863 PGPHFDDIGTEFSSDVLKTRHEHVLRSLYEDLPRQCTTCGLRFKLQEDHSNHMDWHVSRN 684
P P D +G EF +D+LK RHE + +LY DLPRQCTTCGLRFK QE+HS HMDWHV+RN
Sbjct: 779 PTPIQDSVGLEFDADLLKVRHESAISALYADLPRQCTTCGLRFKFQEEHSTHMDWHVTRN 838
Query: 683 RTISKNRKQRVTQIHRKWFVSFKDWLSGTEATTSEVVPPFSPMEAVPXXXXXXELCVPAD 504
R +SKNRKQ+ + RKWFVS WLSG EA ++ VP F P E + EL VPAD
Sbjct: 839 R-MSKNRKQKPS---RKWFVSASMWLSGAEALGTDAVPGFLPTEDIVEKKDDEELAVPAD 894
Query: 503 EEQSLCALCGEPFEDFYSDERDEWMYKGAVYMNAPSGQYESIDKSQLGEIVHAKCRSDS 327
E+Q+LCALCGEPF+DFYSDE +EWMY+GAVYMNAP+G E ID+SQLG IVHAKCRS+S
Sbjct: 895 EDQNLCALCGEPFDDFYSDETEEWMYRGAVYMNAPNGSVEGIDRSQLGPIVHAKCRSES 953
Score = 158 bits (399), Expect = 2e-35
Identities = 134/401 (33%), Positives = 184/401 (45%), Gaps = 3/401 (0%)
Frame = -3
Query: 3554 QDVANAVCNHVLEVPVDQKLPSLYLLDSIVKNIGGEYVKYFAARLPEVFIKSYQQVDPNL 3375
+ +A+A+C ++EVPV+QKLPSLYLLDSIVKNIG EYV+YF++RLPEVF ++Y+QV+PNL
Sbjct: 59 EGIADAICARIIEVPVEQKLPSLYLLDSIVKNIGREYVRYFSSRLPEVFCEAYRQVNPNL 118
Query: 3374 HHSMKRLFHTWRVVFPQVQLHLIEAELNFPPXXXXXXXXXXSRPQLESHAQSPGHSIHVN 3195
H +M+ LF TW VFP L IE +L F S ES P H IHVN
Sbjct: 119 HPAMRHLFGTWSTVFPPSVLRKIEMQLQFSQTGNQQSSGVTSLQSSES--PRPTHGIHVN 176
Query: 3194 PKYLVEARQPFKHSRMEASNSEVNEELSSPERSSGSIRGSPKVWHEPIXXXXXXXXXXXX 3015
PKYL + F+ SN++ +S+ ++ G + ++
Sbjct: 177 PKYL----RQFEQQSGADSNTQHVRGMSAGQKLYGQ---KHTITYDEFDS---------- 219
Query: 3014 XSYIEHGYAPKSSTGYGESDYNISPQRTRAGRSISPRMGIPNPHSPLARLRTTGRVGSPP 2835
+H P S G + + G + I S L+ R SP
Sbjct: 220 ----DHTEVPSSHVGV--------QRLSSTGNVGCTSLAIGANKSQLSSASRVSRPFSPS 267
Query: 2834 R-GAPMVRASSPPRLPSIGRDPSPSVSAGRGLP--PPRTTFGRVNSPATSIGRRSEGAVE 2664
R G+ + +S LPS D SP A P PP FGR GR + E
Sbjct: 268 RIGSDRLLSSEVDDLPS---DDSPRRFAEVASPSRPPVFDFGR--------GRGTIRDEE 316
Query: 2663 TDNGWERPWSAKGEINYARPLDRVNPSIGYGHRNGYAWRPQVMPGALIDAYGNYRGQRSL 2484
T R W K R + + Y NG + ALIDAYGN RGQ
Sbjct: 317 T-----REWPRKHFYGDYRNCSEGSLN-SYKLSNG---NERQTLRALIDAYGNDRGQGMS 367
Query: 2483 TGPLSYLHPPQENDILSSSRALSRNWRNSEEEEYSWENLSP 2361
+ N + ++ R+W+N+EEEE+ WE++SP
Sbjct: 368 NSKPVQVERLDVNGM--GNKVTPRSWQNTEEEEFDWEDMSP 406
>XP_015382498.1 PREDICTED: polyadenylation and cleavage factor homolog 4 isoform X1
[Citrus sinensis]
Length = 1012
Score = 243 bits (620), Expect = 2e-62
Identities = 117/203 (57%), Positives = 148/203 (72%)
Frame = -3
Query: 857 PHFDDIGTEFSSDVLKTRHEHVLRSLYEDLPRQCTTCGLRFKLQEDHSNHMDWHVSRNRT 678
P D +G EF++D+ K RHE + SLY +LPRQCTTCGLRFK QE+HS+HMDWHV++NR
Sbjct: 813 PVQDSVGLEFNADLHKLRHESAISSLYANLPRQCTTCGLRFKCQEEHSSHMDWHVTKNR- 871
Query: 677 ISKNRKQRVTQIHRKWFVSFKDWLSGTEATTSEVVPPFSPMEAVPXXXXXXELCVPADEE 498
+SKNRKQ+ + RKWFVS WLSGTEA ++ +P F P E + E+ VPADE+
Sbjct: 872 MSKNRKQKPS---RKWFVSASMWLSGTEALGTDAIPGFLPAEPIVEKKDDEEMAVPADED 928
Query: 497 QSLCALCGEPFEDFYSDERDEWMYKGAVYMNAPSGQYESIDKSQLGEIVHAKCRSDSVGS 318
Q++CALCGEPF+DFYSDE +EWMYKGA+YMNAP+G E +++SQLG IVHAKCRS+S
Sbjct: 929 QNVCALCGEPFDDFYSDETEEWMYKGAIYMNAPNGSTEGMERSQLGPIVHAKCRSESTVI 988
Query: 317 TLDSREEDVDGSDNPGVRPKKAR 249
D + D GS G + KK R
Sbjct: 989 PSDDFKRDEGGSSEEGNQRKKLR 1011
Score = 198 bits (503), Expect = 5e-48
Identities = 173/514 (33%), Positives = 230/514 (44%), Gaps = 17/514 (3%)
Frame = -3
Query: 3803 PNPSLSNNGNGVAAPVLANQQRGGALQEKFXXXXXXXXXXXXXXXXXXE------IIVLY 3642
P+PSL+ N A P Q+ + +KF I+ LY
Sbjct: 14 PSPSLAFTNNNKAMPNELAQKPSTPIIDKFRALLKLREAEARVGDGAGTTLSTNEIVQLY 73
Query: 3641 REALSELIFNSKPVITDLTIIAGELVHLAQDVANAVCNHVLEVPVDQKLPSLYLLDSIVK 3462
L+EL FNSKP+ITDLTIIAGE +A A+C +LE PV+ KLPSLYLLDSIVK
Sbjct: 74 ETVLAELTFNSKPIITDLTIIAGEQRAHGDGIAEAICTRILEAPVNHKLPSLYLLDSIVK 133
Query: 3461 NIGGEYVKYFAARLPEVFIKSYQQVDPNLHHSMKRLFHTWRVVFPQVQLHLIEAELNFPP 3282
NI EYV+YF++RLPEVF ++Y+QV P+L+ +M+ LF TW VFPQ L IEAEL F
Sbjct: 134 NINKEYVRYFSSRLPEVFCEAYRQVHPDLYSAMQHLFGTWSTVFPQAVLRKIEAELQFSS 193
Query: 3281 XXXXXXXXXXSRPQLESHAQSPGHSIHVNPKYLVEARQPFKHSRMEASNSEVNEELSSPE 3102
S ES P H IHVNPKY+ + F+HS +++ +V S+ +
Sbjct: 194 QVNKQSSNVNSLRASES--PRPTHGIHVNPKYI----RQFEHSNTDSNIQQVKGTSSNLK 247
Query: 3101 RSSGSIRGSPKVWHEPIXXXXXXXXXXXXXSYIEHGYAPKSSTGYGESDYN---ISPQRT 2931
E+G P + GY E D N ++ +
Sbjct: 248 ---------------------------------EYGQNP--AIGYDEFDTNHLELTSSQV 272
Query: 2930 RAGRSISPRMGIPNPHSPLARLRTTGRVGSPPRGAPMVRASSPPRLPSIGRDPSPSVSAG 2751
RS NP + R + GA + SS RL GR SP
Sbjct: 273 GGQRS--------NPAGSVGR-------ATFALGANKLHPSSTSRL---GRSLSPLAIGS 314
Query: 2750 RGLPPPRTTFGRVNSPATSIGRRSEGAVET----DNGWERPWSAKGEINYARPLDRV-NP 2586
G F NSP RR EG + D G R E++ R +R +
Sbjct: 315 EG-----DEFAVENSP-----RRLEGTSPSHPVFDYGIGRAIGRNEEVSEWRNPNRFEST 364
Query: 2585 SIGYGHRNGYAWRPQVMPGALIDAYGNYRGQRSLTGPLSYLHPPQENDI---LSSSRALS 2415
S Y NG+ + P ALIDAYG+ R S PPQ + ++ S
Sbjct: 365 STSYNLSNGHEHQG---PRALIDAYGSDR-------RASNNKPPQVGHMGINGMGNKVAS 414
Query: 2414 RNWRNSEEEEYSWENLSPRAGTHTRGIDESRKED 2313
R+W+N+EEEE+ WE++SP +D RK D
Sbjct: 415 RSWQNTEEEEFDWEDMSPTL------LDRGRKND 442
>XP_016753659.1 PREDICTED: polyadenylation and cleavage factor homolog 4-like isoform
X4 [Gossypium hirsutum]
Length = 858
Score = 241 bits (614), Expect = 2e-62
Identities = 116/179 (64%), Positives = 136/179 (75%)
Frame = -3
Query: 863 PGPHFDDIGTEFSSDVLKTRHEHVLRSLYEDLPRQCTTCGLRFKLQEDHSNHMDWHVSRN 684
P P D +G EF +D+LK RHE + +LY DLPRQCTTCGLRFK QE+HS HMDWHV+RN
Sbjct: 637 PTPIQDSVGLEFDADLLKVRHESAISALYADLPRQCTTCGLRFKFQEEHSTHMDWHVTRN 696
Query: 683 RTISKNRKQRVTQIHRKWFVSFKDWLSGTEATTSEVVPPFSPMEAVPXXXXXXELCVPAD 504
R +SKNRKQ+ + RKWFVS WLSG EA ++ VP F P E + EL V AD
Sbjct: 697 R-MSKNRKQKPS---RKWFVSASMWLSGAEALGTDAVPGFLPTEDIVEKKDDEELAVSAD 752
Query: 503 EEQSLCALCGEPFEDFYSDERDEWMYKGAVYMNAPSGQYESIDKSQLGEIVHAKCRSDS 327
E+Q+LCALCGEPF+DFYSDE +EWMY+GAVYMNAPSG E ID+SQLG IVHAKCRS+S
Sbjct: 753 EDQNLCALCGEPFDDFYSDETEEWMYRGAVYMNAPSGSVEGIDRSQLGPIVHAKCRSES 811
>KRH35572.1 hypothetical protein GLYMA_10G251100 [Glycine max]
Length = 614
Score = 235 bits (600), Expect = 2e-62
Identities = 118/229 (51%), Positives = 156/229 (68%)
Frame = -3
Query: 935 VSTLASTISVNCSNDLPRPPFINGPGPHFDDIGTEFSSDVLKTRHEHVLRSLYEDLPRQC 756
+S+L S ++ +N LP D +GTEF+ D+LK RHE + +LY DLPRQC
Sbjct: 399 ISSLMSQGVISLANQLPAQ----------DSVGTEFNPDILKIRHESAVNALYGDLPRQC 448
Query: 755 TTCGLRFKLQEDHSNHMDWHVSRNRTISKNRKQRVTQIHRKWFVSFKDWLSGTEATTSEV 576
TTC LRFK QE+HS+HMDWHV++NR +SK+RKQ+ + RKWFVS + WLSG EA +E
Sbjct: 449 TTCALRFKCQEEHSSHMDWHVTKNR-MSKSRKQKPS---RKWFVSDRMWLSGAEALGTES 504
Query: 575 VPPFSPMEAVPXXXXXXELCVPADEEQSLCALCGEPFEDFYSDERDEWMYKGAVYMNAPS 396
P F P E + EL VPA+E+Q+ CALCGEPF++FYSDE +EWMY+GAVY+NAP
Sbjct: 505 APGFLPTETIEEMKDHEELAVPAEEDQNTCALCGEPFDEFYSDEMEEWMYRGAVYLNAPL 564
Query: 395 GQYESIDKSQLGEIVHAKCRSDSVGSTLDSREEDVDGSDNPGVRPKKAR 249
G +D+SQLG I+HAKCRS+S +T + D G+D G + K+ R
Sbjct: 565 GITAGMDRSQLGPIIHAKCRSESNMATSEDLGLDEKGADEEGSQRKRMR 613
Score = 131 bits (330), Expect = 8e-28
Identities = 74/159 (46%), Positives = 93/159 (58%), Gaps = 2/159 (1%)
Frame = -3
Query: 3524 VLEVPVDQKLPSLYLLDSIVKNIGGEYVKYFAARLPEVFIKSYQQVDPNLHHSMKRLFHT 3345
+L+VPVDQKLPSLYLLDSIVKN G EY++YF+ RLPEVF ++Y+QV P+LH +M+ LF T
Sbjct: 10 LLQVPVDQKLPSLYLLDSIVKNFGQEYIRYFSLRLPEVFCEAYRQVQPSLHSAMRHLFGT 69
Query: 3344 WRVVFPQVQLHLIEAELNFPPXXXXXXXXXXSRPQLESHAQSPGHSIHVNPKYLVEARQP 3165
W VFP LH IEAEL F P S + P H IHVNPKYL + +
Sbjct: 70 WSKVFPPSVLHKIEAELQF--SQAVNTQSSTPNPVRASESSRPSHGIHVNPKYLRQLERS 127
Query: 3164 FKHSRMEASNSEVNEELSSPERSSGSIR--GSPKVWHEP 3054
S A +V + S GS + + K+ H P
Sbjct: 128 TVDSFCRAPPGQVPGSQNQINHSLGSSQPHDAWKISHHP 166