BLASTX nr result
ID: Ephedra29_contig00003597
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra29_contig00003597
(1933 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_016737063.1 PREDICTED: nuclear pore complex protein NUP98A-li... 126 2e-26
XP_006432656.1 hypothetical protein CICLE_v10000333mg [Citrus cl... 119 3e-24
XP_016686428.1 PREDICTED: nuclear pore complex protein NUP98A-li... 116 3e-23
XP_016686426.1 PREDICTED: nuclear pore complex protein NUP98A-li... 116 3e-23
XP_016686425.1 PREDICTED: nuclear pore complex protein NUP98A-li... 116 3e-23
XP_017611067.1 PREDICTED: nuclear pore complex protein NUP98A-li... 111 1e-21
XP_017611066.1 PREDICTED: nuclear pore complex protein NUP98A-li... 111 1e-21
XP_017611065.1 PREDICTED: nuclear pore complex protein NUP98A-li... 111 1e-21
XP_012488654.1 PREDICTED: nuclear pore complex protein NUP98A-li... 111 1e-21
XP_017611063.1 PREDICTED: nuclear pore complex protein NUP98A-li... 111 1e-21
KHG09356.1 Nuclear pore complex Nup98-Nup96 [Gossypium arboreum] 111 1e-21
XP_018822557.1 PREDICTED: nuclear pore complex protein NUP98A [J... 110 2e-21
KJB39545.1 hypothetical protein B456_007G018500 [Gossypium raimo... 110 2e-21
KJB39546.1 hypothetical protein B456_007G018500 [Gossypium raimo... 110 2e-21
KJB39543.1 hypothetical protein B456_007G018500 [Gossypium raimo... 110 3e-21
XP_012488655.1 PREDICTED: nuclear pore complex protein NUP98A-li... 110 3e-21
KJB39542.1 hypothetical protein B456_007G018500 [Gossypium raimo... 110 3e-21
KJB39538.1 hypothetical protein B456_007G018500 [Gossypium raimo... 110 3e-21
XP_012488653.1 PREDICTED: nuclear pore complex protein NUP98A-li... 110 3e-21
XP_012488652.1 PREDICTED: nuclear pore complex protein NUP98A-li... 110 3e-21
>XP_016737063.1 PREDICTED: nuclear pore complex protein NUP98A-like isoform X1
[Gossypium hirsutum]
Length = 1235
Score = 126 bits (316), Expect = 2e-26
Identities = 96/300 (32%), Positives = 134/300 (44%), Gaps = 15/300 (5%)
Frame = +1
Query: 556 SFGLSSSSA-GPVSAPLF--SSTVQFGSNSIPXXXXXXXXXXXXXXXMTFASGSVPALGS 726
+FG +S+ A G S P F +ST FG+ S P F + S PA G+
Sbjct: 223 AFGATSTPAFGATSTPAFGATSTPAFGATSTPAFGATSTPAFGATSTPAFGATSTPAFGA 282
Query: 727 GSSPTFGLGSLTGANSTSTVMLG--TSPTCGLGSSTGANNTSTVAFGVNSSQSLDSTSTP 900
S+P FG S +TST G ++P G S+ TST AFG S+ + +TSTP
Sbjct: 283 TSTPAFGATSTPAFGATSTPAFGATSTPAFGATSTPAFGATSTPAFGATSTPAFGATSTP 342
Query: 901 PFGANNALTFGSGSVTSAGTNSSPA------PSFGLSGTTATGSNSSLTFG-TGSAQXXX 1059
FGA + FG+ S + G S+PA P+FG + T A G+ S+ FG T +
Sbjct: 343 AFGATSTPAFGATSTPAFGATSTPAFGATSTPAFGATSTPAFGATSTPAFGATSTPAFGA 402
Query: 1060 XXXXXXXXXXXXXXXXXXXXXXFGLNNTP---VNSSPSFGLNSTPSFGSNSTPSFGLNNS 1230
FG +TP S+P+FG STP+FG+ TP+FG ++
Sbjct: 403 TSTPAFGATSTPAFGAATSTPAFGATSTPAFGATSTPAFGATSTPAFGATGTPAFGSTST 462
Query: 1231 QSFGSTNAXXXXXXXXXXXXXXXXXXXXXXXMPSFGISTSSAPSTVGSTSGSFVFGQPVA 1410
+FGST + P+FG TSS P+ S++ SF FG A
Sbjct: 463 PAFGSTGS--PFGSTGTAFGVSNAPAFGASSTPAFG--TSSTPAFGASSTSSFSFGSSPA 518
Score = 119 bits (297), Expect = 5e-24
Identities = 97/296 (32%), Positives = 133/296 (44%), Gaps = 17/296 (5%)
Frame = +1
Query: 556 SFGLSSSSA-GPVSAPLF--SSTVQFGSNSIPXXXXXXXXXXXXXXXMTFASGSVPALGS 726
+FG +S+ A G S P F +ST FG+ S P F + S PA G+
Sbjct: 295 AFGATSTPAFGATSTPAFGATSTPAFGATSTPAFGATSTPAFGATSTPAFGATSTPAFGA 354
Query: 727 GSSPTFGLGSLTGANSTSTVMLG--TSPTCGLGSSTGANNTSTVAFGVNSSQSLDSTSTP 900
S+P FG S +TST G ++P G S+ TST AFG S+ + +TSTP
Sbjct: 355 TSTPAFGATSTPAFGATSTPAFGATSTPAFGATSTPAFGATSTPAFGATSTPAFGATSTP 414
Query: 901 PFGANNAL-TFGSGSVTSAGTNSSPA------PSFGLSGTTATGSNSSLTFG-TGSAQXX 1056
FGA + FG+ S + G S+PA P+FG +GT A GS S+ FG TGS
Sbjct: 415 AFGAATSTPAFGATSTPAFGATSTPAFGATSTPAFGATGTPAFGSTSTPAFGSTGSP--- 471
Query: 1057 XXXXXXXXXXXXXXXXXXXXXXXFGLNNTPV---NSSPSFGLNSTPSFGSNSTPSFGLNN 1227
FG++N P +S+P+FG +STP+FG++ST SF +
Sbjct: 472 ----------------FGSTGTAFGVSNAPAFGASSTPAFGTSSTPAFGASSTSSFSFGS 515
Query: 1228 SQSFG-STNAXXXXXXXXXXXXXXXXXXXXXXXMPSFGISTSSAPSTVGSTSGSFV 1392
S +FG ST A P+FG +T + G GS V
Sbjct: 516 SPAFGQSTAAFGSSPFGTTTVGAQSSAFGSQSSSPAFGSTTFGQSAFGGQRGGSRV 571
Score = 112 bits (279), Expect = 8e-22
Identities = 87/291 (29%), Positives = 122/291 (41%), Gaps = 16/291 (5%)
Frame = +1
Query: 556 SFGLSSSSAGPVSAPLFSSTVQFGSNSIPXXXXXXXXXXXXXXXMTFASG---SVPALGS 726
+FG S + G S P F ++ FG S F S S PA GS
Sbjct: 77 AFGSSMPAFGSSSTPAFGNSSSFGGPSGFGQKPAFGFGSTPTQSSPFGSSGQQSQPAFGS 136
Query: 727 G----SSPTFGLGSLTGANSTSTVMLGTSPTCGLGSSTGANNTSTVAFGVNSSQSLDSTS 894
G S+P S GA ST ++P G S+ TST AFG S+ + +TS
Sbjct: 137 GIFGSSTPFGSTQSAFGATSTPAFGATSTPAFGATSTPAFGATSTPAFGATSTPAFGATS 196
Query: 895 TPPFGANNALTFGSGSVTSAGTNSSPA------PSFGLSGTTATGSNSSLTFGTGSAQXX 1056
TP FGA + FG+ S + G S+PA P+FG + T A G+ S+ FG S
Sbjct: 197 TPAFGATSTPAFGATSTPAFGATSTPAFGATSTPAFGATSTPAFGATSTPAFGATSTPAF 256
Query: 1057 XXXXXXXXXXXXXXXXXXXXXXXFGLNNTP---VNSSPSFGLNSTPSFGSNSTPSFGLNN 1227
FG +TP S+P+FG STP+FG+ STP+FG +
Sbjct: 257 GATSTPAFGATSTPAFGATSTPAFGATSTPAFGATSTPAFGATSTPAFGATSTPAFGATS 316
Query: 1228 SQSFGSTNAXXXXXXXXXXXXXXXXXXXXXXXMPSFGISTSSAPSTVGSTS 1380
+ +FG+T+ P+FG +++ A G+TS
Sbjct: 317 TPAFGATSTPAFGATSTPAFGATSTPAFGATSTPAFGATSTPA---FGATS 364
Score = 108 bits (269), Expect = 1e-20
Identities = 90/314 (28%), Positives = 125/314 (39%), Gaps = 38/314 (12%)
Frame = +1
Query: 553 GSFGLSSSSAGPVSAPLFSSTVQFGSNSIPXXXXXXXXXXXXXXXMTFASGSVPALGSGS 732
G FG + S+ FSST FG++S P F S S PA G+ S
Sbjct: 53 GVFGAAQPSSS------FSSTTTFGASSSPAFGSSMP---------AFGSSSTPAFGNSS 97
Query: 733 S----------PTFGLGSL-------------------TGANSTSTVMLGTSPTCGLGSS 825
S P FG GS +G +ST T G S+
Sbjct: 98 SFGGPSGFGQKPAFGFGSTPTQSSPFGSSGQQSQPAFGSGIFGSSTPFGSTQSAFGATST 157
Query: 826 TGANNTSTVAFGVNSSQSLDSTSTPPFGANNALTFGSGSVTSAGTNSSPA------PSFG 987
TST AFG S+ + +TSTP FGA + FG+ S + G S+PA P+FG
Sbjct: 158 PAFGATSTPAFGATSTPAFGATSTPAFGATSTPAFGATSTPAFGATSTPAFGATSTPAFG 217
Query: 988 LSGTTATGSNSSLTFGTGSAQXXXXXXXXXXXXXXXXXXXXXXXXXFGLNNTP---VNSS 1158
+ T A G+ S+ FG S FG +TP S+
Sbjct: 218 ATSTPAFGATSTPAFGATSTPAFGATSTPAFGATSTPAFGATSTPAFGATSTPAFGATST 277
Query: 1159 PSFGLNSTPSFGSNSTPSFGLNNSQSFGSTNAXXXXXXXXXXXXXXXXXXXXXXXMPSFG 1338
P+FG STP+FG+ STP+FG ++ +FG+T+ P+FG
Sbjct: 278 PAFGATSTPAFGATSTPAFGATSTPAFGATSTPAFGATSTPAFGATSTPAFGATSTPAFG 337
Query: 1339 ISTSSAPSTVGSTS 1380
+++ A G+TS
Sbjct: 338 ATSTPA---FGATS 348
Score = 76.3 bits (186), Expect = 1e-10
Identities = 74/260 (28%), Positives = 103/260 (39%), Gaps = 37/260 (14%)
Frame = +1
Query: 712 PALGSGSSPTFGL---GSLTGANST-------------STVMLGTSPTCGLGSSTGA-NN 840
P GS FG GSL G ST ST G S + GSS A +
Sbjct: 28 PKSSFGSPTPFGSQTGGSLFGGTSTGVFGAAQPSSSFSSTTTFGASSSPAFGSSMPAFGS 87
Query: 841 TSTVAFGVNSSQSLDS--------------TSTPPFGANNALT---FGSGSVTSAGTNSS 969
+ST AFG +SS S T + PFG++ + FGSG S+ S
Sbjct: 88 SSTPAFGNSSSFGGPSGFGQKPAFGFGSTPTQSSPFGSSGQQSQPAFGSGIFGSSTPFGS 147
Query: 970 PAPSFGLSGTTATGSNSSLTFGTGSAQXXXXXXXXXXXXXXXXXXXXXXXXXFGLNNTP- 1146
+FG + T A G+ S+ FG S FG +TP
Sbjct: 148 TQSAFGATSTPAFGATSTPAFGATSTPAFGATSTPAFGATSTPAFGATSTPAFGATSTPA 207
Query: 1147 --VNSSPSFGLNSTPSFGSNSTPSFGLNNSQSFGSTNAXXXXXXXXXXXXXXXXXXXXXX 1320
S+P+FG STP+FG+ STP+FG ++ +FG+T+
Sbjct: 208 FGATSTPAFGATSTPAFGATSTPAFGATSTPAFGATSTPAFGATSTPAFGATSTPAFGAT 267
Query: 1321 XMPSFGISTSSAPSTVGSTS 1380
P+FG +++ A G+TS
Sbjct: 268 STPAFGATSTPA---FGATS 284
>XP_006432656.1 hypothetical protein CICLE_v10000333mg [Citrus clementina] ESR45896.1
hypothetical protein CICLE_v10000333mg [Citrus
clementina]
Length = 793
Score = 119 bits (297), Expect = 3e-24
Identities = 94/296 (31%), Positives = 130/296 (43%), Gaps = 18/296 (6%)
Frame = +1
Query: 556 SFGLSSSSA-GPVSAPLF--SSTVQFGSNSIPXXXXXXXXXXXXXXXMTFASGSVPALGS 726
+FG +S+SA G S+P F ++T FG+ S P F + S PA G+
Sbjct: 235 AFGATSTSAFGATSSPAFGATNTPPFGATSTPPFGSSSTSAFGATSTPAFGATSSPAFGA 294
Query: 727 GSSPTFGLG-SLTGANSTSTVMLGTSPTCGLGSSTGANNTSTVAFGVNSSQSLDSTSTPP 903
SSP FG S GA STS +SP G TS+ FG S+ +T+TPP
Sbjct: 295 TSSPAFGSSTSAIGATSTSAFGATSSPAFGA--------TSSPIFGATSTPPFRATNTPP 346
Query: 904 FGANNALTFGSGSVTSAGTNSSPA------PSFGLSGTTATGSNSSLTFGTGSAQXXXXX 1065
FGA++ TFG+ S ++ G S PA P+FG + T G+ S+ FG+ S
Sbjct: 347 FGASSTSTFGATSTSAFGATSLPAFGATSSPAFGATNTPPFGTTSTPPFGSSSTSA---- 402
Query: 1066 XXXXXXXXXXXXXXXXXXXXFGLNNTPV---NSSPSFGLNSTPSFGSNSTPSFGLNNSQS 1236
FG NTP SSP+FG +T FG+ STP FG +++ +
Sbjct: 403 --------------------FGATNTPAFGATSSPAFGATNTHPFGATSTPPFGASSTSA 442
Query: 1237 FGSTNAXXXXXXXXXXXXXXXXXXXXXXXMPSFGISTSSA-----PSTVGSTSGSF 1389
FG T+A P FG S++SA T G+T +F
Sbjct: 443 FGLTSAPAFDATSSPDFRVTSAPPFGATNAPPFGASSTSAFGATSTPTFGTTGSAF 498
Score = 112 bits (281), Expect = 3e-22
Identities = 94/310 (30%), Positives = 126/310 (40%), Gaps = 43/310 (13%)
Frame = +1
Query: 556 SFGLSSSSA---------GPVSAPLF--SSTVQFGSNSIPXXXXXXXXXXXXXXXMTFAS 702
+FG +SS A G S P F SST FG+ S P F +
Sbjct: 140 AFGATSSPAFGATNTPPFGATSTPPFGSSSTSAFGATSTPAFRATRSPAFGSSTS-AFGA 198
Query: 703 GSVPALGSGSSPTFGLGSLTGANSTSTVMLGTSPTCGLGSSTGANNTSTVAFGVNSSQSL 882
S A G+ SSP FG S +TST G+S T G+ TST AFG SS +
Sbjct: 199 TSTSAFGATSSPAFGATSTPPFGATSTPPFGSSSTSAFGA------TSTSAFGATSSPAF 252
Query: 883 DSTSTPPFGANNALTFGSGSVTSAGTNSSPA------PSFGL-------SGTTATGSNSS 1023
+T+TPPFGA + FGS S ++ G S+PA P+FG S T+A G+ S+
Sbjct: 253 GATNTPPFGATSTPPFGSSSTSAFGATSTPAFGATSSPAFGATSSPAFGSSTSAIGATST 312
Query: 1024 LTFGTGSAQXXXXXXXXXXXXXXXXXXXXXXXXXFGLNNTP------------------- 1146
FG S+ FG ++T
Sbjct: 313 SAFGATSSPAFGATSSPIFGATSTPPFRATNTPPFGASSTSTFGATSTSAFGATSLPAFG 372
Query: 1147 VNSSPSFGLNSTPSFGSNSTPSFGLNNSQSFGSTNAXXXXXXXXXXXXXXXXXXXXXXXM 1326
SSP+FG +TP FG+ STP FG +++ +FG+TN
Sbjct: 373 ATSSPAFGATNTPPFGTTSTPPFGSSSTSAFGATNTPAFGATSSPAFGATNTHPFGATST 432
Query: 1327 PSFGISTSSA 1356
P FG S++SA
Sbjct: 433 PPFGASSTSA 442
Score = 110 bits (276), Expect = 1e-21
Identities = 85/259 (32%), Positives = 121/259 (46%), Gaps = 27/259 (10%)
Frame = +1
Query: 556 SFGLSSSSA-GPVSAPLF--SSTVQFGSNSIPXXXXXXXXXXXXXXXMTFASGSVPALGS 726
+FG +SS A G S+P+F +ST F + + P F + S+PA G+
Sbjct: 314 AFGATSSPAFGATSSPIFGATSTPPFRATNTPPFGASSTSTFGATSTSAFGATSLPAFGA 373
Query: 727 GSSPTFGLGSLTGANSTSTVMLGTSPTCGLGSSTGANNTSTVAFGVNSSQSLDSTSTPPF 906
SSP FG + +TST G+S T G+ T+T AFG SS + +T+T PF
Sbjct: 374 TSSPAFGATNTPPFGTTSTPPFGSSSTSAFGA------TNTPAFGATSSPAFGATNTHPF 427
Query: 907 GANNALTFGSGSVTSAGTNSSP----------------------APSFGLSGTTATGSNS 1020
GA + FG+ S ++ G S+P AP FG S T+A G+ S
Sbjct: 428 GATSTPPFGASSTSAFGLTSAPAFDATSSPDFRVTSAPPFGATNAPPFGASSTSAFGATS 487
Query: 1021 SLTFG-TGSAQXXXXXXXXXXXXXXXXXXXXXXXXXFGLNNTPV-NSSPSFGLNSTPSFG 1194
+ TFG TGSA FG + TP S FG +STP FG
Sbjct: 488 TPTFGTTGSA--------------------------FGASGTPAFGSGEVFGASSTPLFG 521
Query: 1195 SNSTPSFGLNNSQSFGSTN 1251
S+ST +FG +N+ +FG+++
Sbjct: 522 SSSTLAFGASNTPAFGASS 540
Score = 105 bits (262), Expect = 7e-20
Identities = 89/296 (30%), Positives = 127/296 (42%), Gaps = 19/296 (6%)
Frame = +1
Query: 556 SFGLSSSSAGPVSAPLF--SSTVQFGSNSIPXXXXXXXXXXXXXXXMTFASGSV----PA 717
+FG SSS A +S P F SST FGS++ +F S+ PA
Sbjct: 48 TFGASSSPAFAISVPTFGASSTPSFGSST-----------------SSFGGSSIFSQKPA 90
Query: 718 LGSGSSPT----FGLGSLTGANSTSTVMLGTSPTCGLGSSTGANNTSTVAFGVNSSQSLD 885
G GS+ T FG + + + + +S S TS AFG SS +
Sbjct: 91 FGFGSTSTQASPFGSTTQQSQPAFGSSLFSSSTPFEASSQPAFGATSLPAFGATSSPAFG 150
Query: 886 STSTPPFGANNALTFGSGSVTSAGTNSSPA------PSFGLSGTTATGSNSSLTFGTGSA 1047
+T+TPPFGA + FGS S ++ G S+PA P+FG S T+A G+ S+ FG S+
Sbjct: 151 ATNTPPFGATSTPPFGSSSTSAFGATSTPAFRATRSPAFG-SSTSAFGATSTSAFGATSS 209
Query: 1048 QXXXXXXXXXXXXXXXXXXXXXXXXXFGLNNTP---VNSSPSFGLNSTPSFGSNSTPSFG 1218
FG +T SSP+FG +TP FG+ STP FG
Sbjct: 210 PAFGATSTPPFGATSTPPFGSSSTSAFGATSTSAFGATSSPAFGATNTPPFGATSTPPFG 269
Query: 1219 LNNSQSFGSTNAXXXXXXXXXXXXXXXXXXXXXXXMPSFGISTSSAPSTVGSTSGS 1386
+++ +FG+T+ P+FG STS+ +T S G+
Sbjct: 270 SSSTSAFGATST--------PAFGATSSPAFGATSSPAFGSSTSAIGATSTSAFGA 317
>XP_016686428.1 PREDICTED: nuclear pore complex protein NUP98A-like isoform X3
[Gossypium hirsutum]
Length = 1089
Score = 116 bits (291), Expect = 3e-23
Identities = 98/304 (32%), Positives = 134/304 (44%), Gaps = 30/304 (9%)
Frame = +1
Query: 553 GSFGLSSSSAGPVSAPLFSSTVQFGSNSIPXXXXXXXXXXXXXXXMTFASGSVPALGSGS 732
G FG + SS+ FSST FG++S P F S S PA GS S
Sbjct: 60 GVFGSAQSSSP------FSSTTAFGASSSPAFGSSMP---------AFGSSSTPAFGSSS 104
Query: 733 S-----------PTFGLGSLTGANST-STVMLGTSPTCGLG--SSTGANNTSTVAFGVNS 870
S P FG GS T +S + M + P G G S+ +ST AFG S
Sbjct: 105 SSFGGSSVFGQKPAFGFGSTTTQSSPFGSTMQQSQPAFGSGIFGSSVPFGSSTPAFGATS 164
Query: 871 SQSLDSTSTPPFGANNALTFGSGSVTSAGTNSSPA------PSFGLSGTTATGSNSSLTF 1032
+ + +TSTP FGA +AL FG+ S + G S+PA P+FG + T A GS S F
Sbjct: 165 TSAFGATSTPAFGATSALAFGATSAPAFGGTSTPAFGSMSTPAFGATSTPAFGSTGSPAF 224
Query: 1033 G-TGSAQXXXXXXXXXXXXXXXXXXXXXXXXXFGLNNTPV---------NSSPSFGLNST 1182
G TG+A FG++N PV +S+P+FG +ST
Sbjct: 225 GSTGTA--------------------------FGVSNAPVFGTGGTFGASSTPAFGTSST 258
Query: 1183 PSFGSNSTPSFGLNNSQSFGSTNAXXXXXXXXXXXXXXXXXXXXXXXMPSFGISTSSAPS 1362
P+FG +STP+FG ++S SF +A P+FG +++ A
Sbjct: 259 PAFGGSSTPAFGASSSPSFSFGSAFGQSTPAFGSFGATSTPAFGSTSTPAFGATSTPAFG 318
Query: 1363 TVGS 1374
+ GS
Sbjct: 319 STGS 322
Score = 99.4 bits (246), Expect = 7e-18
Identities = 86/246 (34%), Positives = 119/246 (48%), Gaps = 15/246 (6%)
Frame = +1
Query: 556 SFGLSSSSA-GPVSAPLF--SSTVQFGSNSIPXXXXXXXXXXXXXXXMTFASGSVPALGS 726
+FG +S+ A G SAP F +ST FGS S P F S A G
Sbjct: 175 AFGATSALAFGATSAPAFGGTSTPAFGSMSTPAFGATSTPAFGSTGSPAFGSTGT-AFGV 233
Query: 727 GSSPTFGLGSLTGANSTSTVMLGTSPTCGLGSST---GANNTSTVAFGVNSSQ------S 879
++P FG G GA+ST ++P G GSST GA+++ + +FG Q S
Sbjct: 234 SNAPVFGTGGTFGASSTPAFGTSSTPAFG-GSSTPAFGASSSPSFSFGSAFGQSTPAFGS 292
Query: 880 LDSTSTPPFGANNALTFGSGSVTSAGTNSSPAPSFGLSGTTATGSNSSLTFGTGSAQXXX 1059
+TSTP FG+ + FG+ S + G+ SPA FG SGTT SN+S+ FGT
Sbjct: 293 FGATSTPAFGSTSTPAFGATSTPAFGSTGSPA--FGSSGTTFGMSNASV-FGTEGT---- 345
Query: 1060 XXXXXXXXXXXXXXXXXXXXXXFGLNNTP---VNSSPSFGLNSTPSFGSNSTPSFGLNNS 1230
FG ++TP +SSP+FG +STPSF S+P+FG ++
Sbjct: 346 ----------------------FGASSTPAFGTSSSPAFGASSTPSFSFGSSPTFG-QST 382
Query: 1231 QSFGST 1248
+FGS+
Sbjct: 383 PAFGSS 388
Score = 90.9 bits (224), Expect = 3e-15
Identities = 83/268 (30%), Positives = 118/268 (44%), Gaps = 36/268 (13%)
Frame = +1
Query: 556 SFGLSSSSA-GPVSAPLFSST--VQFGSNSIPXXXXXXXXXXXXXXXMTFASGSVPALGS 726
+FG +S+SA G S P F +T + FG+ S P F + S PA GS
Sbjct: 159 AFGATSTSAFGATSTPAFGATSALAFGATSAPAFGGTSTPAFGSMSTPAFGATSTPAFGS 218
Query: 727 GSSPTFGLGSLTGANSTSTVM-LGTSPTCGLGSSTGANNTSTVAFGVNSSQSLDSTSTPP 903
SP FG ST T + +P G G + GA+ ST AFG +S+ + +STP
Sbjct: 219 TGSPAFG--------STGTAFGVSNAPVFGTGGTFGAS--STPAFGTSSTPAFGGSSTPA 268
Query: 904 FGANNALTFGSGSVT--------SAGTNSSPA------PSFGLSGTTATGSNSSLTFGT- 1038
FGA+++ +F GS S G S+PA P+FG + T A GS S FG+
Sbjct: 269 FGASSSPSFSFGSAFGQSTPAFGSFGATSTPAFGSTSTPAFGATSTPAFGSTGSPAFGSS 328
Query: 1039 ----GSAQXXXXXXXXXXXXXXXXXXXXXXXXXFGLNNTP---VNSSPSFGLNSTPSFGS 1197
G + FG ++TP SSP+FG STP+FGS
Sbjct: 329 GTTFGMSNASVFGTEGTFGASSTPAFGTSSSPAFGASSTPSFSFGSSPTFG-QSTPAFGS 387
Query: 1198 ----------NSTPSFGLNNSQSFGSTN 1251
S+P +++ +FG+T+
Sbjct: 388 SPFGTTAFGAQSSPFGSQSSTPAFGTTS 415
Score = 79.7 bits (195), Expect = 1e-11
Identities = 88/307 (28%), Positives = 120/307 (39%), Gaps = 41/307 (13%)
Frame = +1
Query: 601 LFSSTVQFG-SNSIPXXXXXXXXXXXXXXXMTFAS----GSVPALGSGSSPTFGLGSLTG 765
+F ST FG S+S P FA GS+ GS + + G+ TG
Sbjct: 1 MFGSTSPFGQSSSSPFASQSVFGQTNNANSNPFAPKPSFGSITPFGSQTGGSIFGGTSTG 60
Query: 766 ANST--------STVMLGTSPTCGLGSSTGA-NNTSTVAFGVNSSQ-------------- 876
+ ST G S + GSS A ++ST AFG +SS
Sbjct: 61 VFGSAQSSSPFSSTTAFGASSSPAFGSSMPAFGSSSTPAFGSSSSSFGGSSVFGQKPAFG 120
Query: 877 -SLDSTSTPPFGA---NNALTFGSGSVTSAGTNSSPAPSFGLSGTTATGSNSSLTFGTGS 1044
+T + PFG+ + FGSG S+ S P+FG + T+A G+ S+ FG S
Sbjct: 121 FGSTTTQSSPFGSTMQQSQPAFGSGIFGSSVPFGSSTPAFGATSTSAFGATSTPAFGATS 180
Query: 1045 AQXXXXXXXXXXXXXXXXXXXXXXXXXFGLNNTPV---NSSPSFGLNSTPSFGSNSTPSF 1215
A FG + P S+P+FG STP+FG+ STP+F
Sbjct: 181 A------------------------LAFGATSAPAFGGTSTPAFGSMSTPAFGATSTPAF 216
Query: 1216 GLNNSQSFGSTNAXXXXXXXXXXXXXXXXXXXXXXXMPSFGIST------SSAPSTVGST 1377
G S +FGST P+FG S+ SS P+ S+
Sbjct: 217 GSTGSPAFGSTGT---AFGVSNAPVFGTGGTFGASSTPAFGTSSTPAFGGSSTPAFGASS 273
Query: 1378 SGSFVFG 1398
S SF FG
Sbjct: 274 SPSFSFG 280
Score = 65.5 bits (158), Expect = 3e-07
Identities = 73/244 (29%), Positives = 95/244 (38%), Gaps = 10/244 (4%)
Frame = +1
Query: 553 GSFGLSSSSA-GPVSAPLF--SSTVQFGSNSIPXXXXXXXXXXXXXXXM-----TFASGS 708
GSFG +S+ A G S P F +ST FGS P + TF + S
Sbjct: 291 GSFGATSTPAFGSTSTPAFGATSTPAFGSTGSPAFGSSGTTFGMSNASVFGTEGTFGASS 350
Query: 709 VPALGSGSSPTFGLGSLTGANSTSTVMLGTSPTCGLGS-STGANNTSTVAFGVNSSQSLD 885
PA G+ SSP F GA+ST + G+SPT G + + G++ T AFG SS
Sbjct: 351 TPAFGTSSSPAF------GASSTPSFSFGSSPTFGQSTPAFGSSPFGTTAFGAQSSPFGS 404
Query: 886 STSTPPFGANNALTFGSGSVTSAGTNSSPAPSFGLSGTTATGSNSSLTFGTGSAQXXXXX 1065
+STP FG +FG S AP S TT S GT A
Sbjct: 405 QSSTPAFGTT---SFGQSPFGGQRGGSRVAP---YSSTTEADGGS----GTQPAGKLESI 454
Query: 1066 XXXXXXXXXXXXXXXXXXXXFGLNNTP-VNSSPSFGLNSTPSFGSNSTPSFGLNNSQSFG 1242
G P S PS G+ FG +++PS + S +FG
Sbjct: 455 SAMPVYKDKSHEELRWEDYQLGDKGGPNPASQPSAGI----GFGVSTSPSNPFSTSSTFG 510
Query: 1243 STNA 1254
T +
Sbjct: 511 FTTS 514
>XP_016686426.1 PREDICTED: nuclear pore complex protein NUP98A-like isoform X2
[Gossypium hirsutum]
Length = 1113
Score = 116 bits (291), Expect = 3e-23
Identities = 98/304 (32%), Positives = 134/304 (44%), Gaps = 30/304 (9%)
Frame = +1
Query: 553 GSFGLSSSSAGPVSAPLFSSTVQFGSNSIPXXXXXXXXXXXXXXXMTFASGSVPALGSGS 732
G FG + SS+ FSST FG++S P F S S PA GS S
Sbjct: 60 GVFGSAQSSSP------FSSTTAFGASSSPAFGSSMP---------AFGSSSTPAFGSSS 104
Query: 733 S-----------PTFGLGSLTGANST-STVMLGTSPTCGLG--SSTGANNTSTVAFGVNS 870
S P FG GS T +S + M + P G G S+ +ST AFG S
Sbjct: 105 SSFGGSSVFGQKPAFGFGSTTTQSSPFGSTMQQSQPAFGSGIFGSSVPFGSSTPAFGATS 164
Query: 871 SQSLDSTSTPPFGANNALTFGSGSVTSAGTNSSPA------PSFGLSGTTATGSNSSLTF 1032
+ + +TSTP FGA +AL FG+ S + G S+PA P+FG + T A GS S F
Sbjct: 165 TSAFGATSTPAFGATSALAFGATSAPAFGGTSTPAFGSMSTPAFGATSTPAFGSTGSPAF 224
Query: 1033 G-TGSAQXXXXXXXXXXXXXXXXXXXXXXXXXFGLNNTPV---------NSSPSFGLNST 1182
G TG+A FG++N PV +S+P+FG +ST
Sbjct: 225 GSTGTA--------------------------FGVSNAPVFGTGGTFGASSTPAFGTSST 258
Query: 1183 PSFGSNSTPSFGLNNSQSFGSTNAXXXXXXXXXXXXXXXXXXXXXXXMPSFGISTSSAPS 1362
P+FG +STP+FG ++S SF +A P+FG +++ A
Sbjct: 259 PAFGGSSTPAFGASSSPSFSFGSAFGQSTPAFGSFGATSTPAFGSTSTPAFGATSTPAFG 318
Query: 1363 TVGS 1374
+ GS
Sbjct: 319 STGS 322
Score = 99.4 bits (246), Expect = 8e-18
Identities = 86/246 (34%), Positives = 119/246 (48%), Gaps = 15/246 (6%)
Frame = +1
Query: 556 SFGLSSSSA-GPVSAPLF--SSTVQFGSNSIPXXXXXXXXXXXXXXXMTFASGSVPALGS 726
+FG +S+ A G SAP F +ST FGS S P F S A G
Sbjct: 175 AFGATSALAFGATSAPAFGGTSTPAFGSMSTPAFGATSTPAFGSTGSPAFGSTGT-AFGV 233
Query: 727 GSSPTFGLGSLTGANSTSTVMLGTSPTCGLGSST---GANNTSTVAFGVNSSQ------S 879
++P FG G GA+ST ++P G GSST GA+++ + +FG Q S
Sbjct: 234 SNAPVFGTGGTFGASSTPAFGTSSTPAFG-GSSTPAFGASSSPSFSFGSAFGQSTPAFGS 292
Query: 880 LDSTSTPPFGANNALTFGSGSVTSAGTNSSPAPSFGLSGTTATGSNSSLTFGTGSAQXXX 1059
+TSTP FG+ + FG+ S + G+ SPA FG SGTT SN+S+ FGT
Sbjct: 293 FGATSTPAFGSTSTPAFGATSTPAFGSTGSPA--FGSSGTTFGMSNASV-FGTEGT---- 345
Query: 1060 XXXXXXXXXXXXXXXXXXXXXXFGLNNTP---VNSSPSFGLNSTPSFGSNSTPSFGLNNS 1230
FG ++TP +SSP+FG +STPSF S+P+FG ++
Sbjct: 346 ----------------------FGASSTPAFGTSSSPAFGASSTPSFSFGSSPTFG-QST 382
Query: 1231 QSFGST 1248
+FGS+
Sbjct: 383 PAFGSS 388
Score = 90.9 bits (224), Expect = 3e-15
Identities = 83/268 (30%), Positives = 118/268 (44%), Gaps = 36/268 (13%)
Frame = +1
Query: 556 SFGLSSSSA-GPVSAPLFSST--VQFGSNSIPXXXXXXXXXXXXXXXMTFASGSVPALGS 726
+FG +S+SA G S P F +T + FG+ S P F + S PA GS
Sbjct: 159 AFGATSTSAFGATSTPAFGATSALAFGATSAPAFGGTSTPAFGSMSTPAFGATSTPAFGS 218
Query: 727 GSSPTFGLGSLTGANSTSTVM-LGTSPTCGLGSSTGANNTSTVAFGVNSSQSLDSTSTPP 903
SP FG ST T + +P G G + GA+ ST AFG +S+ + +STP
Sbjct: 219 TGSPAFG--------STGTAFGVSNAPVFGTGGTFGAS--STPAFGTSSTPAFGGSSTPA 268
Query: 904 FGANNALTFGSGSVT--------SAGTNSSPA------PSFGLSGTTATGSNSSLTFGT- 1038
FGA+++ +F GS S G S+PA P+FG + T A GS S FG+
Sbjct: 269 FGASSSPSFSFGSAFGQSTPAFGSFGATSTPAFGSTSTPAFGATSTPAFGSTGSPAFGSS 328
Query: 1039 ----GSAQXXXXXXXXXXXXXXXXXXXXXXXXXFGLNNTP---VNSSPSFGLNSTPSFGS 1197
G + FG ++TP SSP+FG STP+FGS
Sbjct: 329 GTTFGMSNASVFGTEGTFGASSTPAFGTSSSPAFGASSTPSFSFGSSPTFG-QSTPAFGS 387
Query: 1198 ----------NSTPSFGLNNSQSFGSTN 1251
S+P +++ +FG+T+
Sbjct: 388 SPFGTTAFGAQSSPFGSQSSTPAFGTTS 415
Score = 79.7 bits (195), Expect = 1e-11
Identities = 88/307 (28%), Positives = 120/307 (39%), Gaps = 41/307 (13%)
Frame = +1
Query: 601 LFSSTVQFG-SNSIPXXXXXXXXXXXXXXXMTFAS----GSVPALGSGSSPTFGLGSLTG 765
+F ST FG S+S P FA GS+ GS + + G+ TG
Sbjct: 1 MFGSTSPFGQSSSSPFASQSVFGQTNNANSNPFAPKPSFGSITPFGSQTGGSIFGGTSTG 60
Query: 766 ANST--------STVMLGTSPTCGLGSSTGA-NNTSTVAFGVNSSQ-------------- 876
+ ST G S + GSS A ++ST AFG +SS
Sbjct: 61 VFGSAQSSSPFSSTTAFGASSSPAFGSSMPAFGSSSTPAFGSSSSSFGGSSVFGQKPAFG 120
Query: 877 -SLDSTSTPPFGA---NNALTFGSGSVTSAGTNSSPAPSFGLSGTTATGSNSSLTFGTGS 1044
+T + PFG+ + FGSG S+ S P+FG + T+A G+ S+ FG S
Sbjct: 121 FGSTTTQSSPFGSTMQQSQPAFGSGIFGSSVPFGSSTPAFGATSTSAFGATSTPAFGATS 180
Query: 1045 AQXXXXXXXXXXXXXXXXXXXXXXXXXFGLNNTPV---NSSPSFGLNSTPSFGSNSTPSF 1215
A FG + P S+P+FG STP+FG+ STP+F
Sbjct: 181 A------------------------LAFGATSAPAFGGTSTPAFGSMSTPAFGATSTPAF 216
Query: 1216 GLNNSQSFGSTNAXXXXXXXXXXXXXXXXXXXXXXXMPSFGIST------SSAPSTVGST 1377
G S +FGST P+FG S+ SS P+ S+
Sbjct: 217 GSTGSPAFGSTGT---AFGVSNAPVFGTGGTFGASSTPAFGTSSTPAFGGSSTPAFGASS 273
Query: 1378 SGSFVFG 1398
S SF FG
Sbjct: 274 SPSFSFG 280
Score = 69.7 bits (169), Expect = 1e-08
Identities = 76/255 (29%), Positives = 100/255 (39%), Gaps = 23/255 (9%)
Frame = +1
Query: 553 GSFGLSSSSA-GPVSAPLF--SSTVQFGSNSIPXXXXXXXXXXXXXXXM-----TFASGS 708
GSFG +S+ A G S P F +ST FGS P + TF + S
Sbjct: 291 GSFGATSTPAFGSTSTPAFGATSTPAFGSTGSPAFGSSGTTFGMSNASVFGTEGTFGASS 350
Query: 709 VPALGSGSSPTFGLGSLTGANSTSTVMLGTSPTCGLGS-STGANNTSTVAFGVNSSQSLD 885
PA G+ SSP F GA+ST + G+SPT G + + G++ T AFG SS
Sbjct: 351 TPAFGTSSSPAF------GASSTPSFSFGSSPTFGQSTPAFGSSPFGTTAFGAQSSPFGS 404
Query: 886 STSTPPFGANNALTFGSGSVTSAGTNSSPAP------SFGLSGTTATGSNSSLTF----- 1032
+STP FG +FG S AP + G SGT G S++
Sbjct: 405 QSSTPAFGTT---SFGQSPFGGQRGGSRVAPYSSTTEADGGSGTQPAGKLESISAMPVYK 461
Query: 1033 GTGSAQXXXXXXXXXXXXXXXXXXXXXXXXXFGLNNTPVN---SSPSFGLNSTPSFGSNS 1203
+ FG++ +P N +S +FG S F S S
Sbjct: 462 DKSHEELRWEDYQLGDKGGPNPASQPSAGIGFGVSTSPSNPFSTSSTFGQTSANPFSSTS 521
Query: 1204 TPSFGLNNSQSFGST 1248
T F L SF ST
Sbjct: 522 TNPFSL-KPPSFNST 535
>XP_016686425.1 PREDICTED: nuclear pore complex protein NUP98A-like isoform X1
[Gossypium hirsutum]
Length = 1115
Score = 116 bits (291), Expect = 3e-23
Identities = 98/304 (32%), Positives = 134/304 (44%), Gaps = 30/304 (9%)
Frame = +1
Query: 553 GSFGLSSSSAGPVSAPLFSSTVQFGSNSIPXXXXXXXXXXXXXXXMTFASGSVPALGSGS 732
G FG + SS+ FSST FG++S P F S S PA GS S
Sbjct: 60 GVFGSAQSSSP------FSSTTAFGASSSPAFGSSMP---------AFGSSSTPAFGSSS 104
Query: 733 S-----------PTFGLGSLTGANST-STVMLGTSPTCGLG--SSTGANNTSTVAFGVNS 870
S P FG GS T +S + M + P G G S+ +ST AFG S
Sbjct: 105 SSFGGSSVFGQKPAFGFGSTTTQSSPFGSTMQQSQPAFGSGIFGSSVPFGSSTPAFGATS 164
Query: 871 SQSLDSTSTPPFGANNALTFGSGSVTSAGTNSSPA------PSFGLSGTTATGSNSSLTF 1032
+ + +TSTP FGA +AL FG+ S + G S+PA P+FG + T A GS S F
Sbjct: 165 TSAFGATSTPAFGATSALAFGATSAPAFGGTSTPAFGSMSTPAFGATSTPAFGSTGSPAF 224
Query: 1033 G-TGSAQXXXXXXXXXXXXXXXXXXXXXXXXXFGLNNTPV---------NSSPSFGLNST 1182
G TG+A FG++N PV +S+P+FG +ST
Sbjct: 225 GSTGTA--------------------------FGVSNAPVFGTGGTFGASSTPAFGTSST 258
Query: 1183 PSFGSNSTPSFGLNNSQSFGSTNAXXXXXXXXXXXXXXXXXXXXXXXMPSFGISTSSAPS 1362
P+FG +STP+FG ++S SF +A P+FG +++ A
Sbjct: 259 PAFGGSSTPAFGASSSPSFSFGSAFGQSTPAFGSFGATSTPAFGSTSTPAFGATSTPAFG 318
Query: 1363 TVGS 1374
+ GS
Sbjct: 319 STGS 322
Score = 99.4 bits (246), Expect = 8e-18
Identities = 86/246 (34%), Positives = 119/246 (48%), Gaps = 15/246 (6%)
Frame = +1
Query: 556 SFGLSSSSA-GPVSAPLF--SSTVQFGSNSIPXXXXXXXXXXXXXXXMTFASGSVPALGS 726
+FG +S+ A G SAP F +ST FGS S P F S A G
Sbjct: 175 AFGATSALAFGATSAPAFGGTSTPAFGSMSTPAFGATSTPAFGSTGSPAFGSTGT-AFGV 233
Query: 727 GSSPTFGLGSLTGANSTSTVMLGTSPTCGLGSST---GANNTSTVAFGVNSSQ------S 879
++P FG G GA+ST ++P G GSST GA+++ + +FG Q S
Sbjct: 234 SNAPVFGTGGTFGASSTPAFGTSSTPAFG-GSSTPAFGASSSPSFSFGSAFGQSTPAFGS 292
Query: 880 LDSTSTPPFGANNALTFGSGSVTSAGTNSSPAPSFGLSGTTATGSNSSLTFGTGSAQXXX 1059
+TSTP FG+ + FG+ S + G+ SPA FG SGTT SN+S+ FGT
Sbjct: 293 FGATSTPAFGSTSTPAFGATSTPAFGSTGSPA--FGSSGTTFGMSNASV-FGTEGT---- 345
Query: 1060 XXXXXXXXXXXXXXXXXXXXXXFGLNNTP---VNSSPSFGLNSTPSFGSNSTPSFGLNNS 1230
FG ++TP +SSP+FG +STPSF S+P+FG ++
Sbjct: 346 ----------------------FGASSTPAFGTSSSPAFGASSTPSFSFGSSPTFG-QST 382
Query: 1231 QSFGST 1248
+FGS+
Sbjct: 383 PAFGSS 388
Score = 90.9 bits (224), Expect = 3e-15
Identities = 83/268 (30%), Positives = 118/268 (44%), Gaps = 36/268 (13%)
Frame = +1
Query: 556 SFGLSSSSA-GPVSAPLFSST--VQFGSNSIPXXXXXXXXXXXXXXXMTFASGSVPALGS 726
+FG +S+SA G S P F +T + FG+ S P F + S PA GS
Sbjct: 159 AFGATSTSAFGATSTPAFGATSALAFGATSAPAFGGTSTPAFGSMSTPAFGATSTPAFGS 218
Query: 727 GSSPTFGLGSLTGANSTSTVM-LGTSPTCGLGSSTGANNTSTVAFGVNSSQSLDSTSTPP 903
SP FG ST T + +P G G + GA+ ST AFG +S+ + +STP
Sbjct: 219 TGSPAFG--------STGTAFGVSNAPVFGTGGTFGAS--STPAFGTSSTPAFGGSSTPA 268
Query: 904 FGANNALTFGSGSVT--------SAGTNSSPA------PSFGLSGTTATGSNSSLTFGT- 1038
FGA+++ +F GS S G S+PA P+FG + T A GS S FG+
Sbjct: 269 FGASSSPSFSFGSAFGQSTPAFGSFGATSTPAFGSTSTPAFGATSTPAFGSTGSPAFGSS 328
Query: 1039 ----GSAQXXXXXXXXXXXXXXXXXXXXXXXXXFGLNNTP---VNSSPSFGLNSTPSFGS 1197
G + FG ++TP SSP+FG STP+FGS
Sbjct: 329 GTTFGMSNASVFGTEGTFGASSTPAFGTSSSPAFGASSTPSFSFGSSPTFG-QSTPAFGS 387
Query: 1198 ----------NSTPSFGLNNSQSFGSTN 1251
S+P +++ +FG+T+
Sbjct: 388 SPFGTTAFGAQSSPFGSQSSTPAFGTTS 415
Score = 79.7 bits (195), Expect = 1e-11
Identities = 88/307 (28%), Positives = 120/307 (39%), Gaps = 41/307 (13%)
Frame = +1
Query: 601 LFSSTVQFG-SNSIPXXXXXXXXXXXXXXXMTFAS----GSVPALGSGSSPTFGLGSLTG 765
+F ST FG S+S P FA GS+ GS + + G+ TG
Sbjct: 1 MFGSTSPFGQSSSSPFASQSVFGQTNNANSNPFAPKPSFGSITPFGSQTGGSIFGGTSTG 60
Query: 766 ANST--------STVMLGTSPTCGLGSSTGA-NNTSTVAFGVNSSQ-------------- 876
+ ST G S + GSS A ++ST AFG +SS
Sbjct: 61 VFGSAQSSSPFSSTTAFGASSSPAFGSSMPAFGSSSTPAFGSSSSSFGGSSVFGQKPAFG 120
Query: 877 -SLDSTSTPPFGA---NNALTFGSGSVTSAGTNSSPAPSFGLSGTTATGSNSSLTFGTGS 1044
+T + PFG+ + FGSG S+ S P+FG + T+A G+ S+ FG S
Sbjct: 121 FGSTTTQSSPFGSTMQQSQPAFGSGIFGSSVPFGSSTPAFGATSTSAFGATSTPAFGATS 180
Query: 1045 AQXXXXXXXXXXXXXXXXXXXXXXXXXFGLNNTPV---NSSPSFGLNSTPSFGSNSTPSF 1215
A FG + P S+P+FG STP+FG+ STP+F
Sbjct: 181 A------------------------LAFGATSAPAFGGTSTPAFGSMSTPAFGATSTPAF 216
Query: 1216 GLNNSQSFGSTNAXXXXXXXXXXXXXXXXXXXXXXXMPSFGIST------SSAPSTVGST 1377
G S +FGST P+FG S+ SS P+ S+
Sbjct: 217 GSTGSPAFGSTGT---AFGVSNAPVFGTGGTFGASSTPAFGTSSTPAFGGSSTPAFGASS 273
Query: 1378 SGSFVFG 1398
S SF FG
Sbjct: 274 SPSFSFG 280
Score = 69.7 bits (169), Expect = 1e-08
Identities = 76/255 (29%), Positives = 100/255 (39%), Gaps = 23/255 (9%)
Frame = +1
Query: 553 GSFGLSSSSA-GPVSAPLF--SSTVQFGSNSIPXXXXXXXXXXXXXXXM-----TFASGS 708
GSFG +S+ A G S P F +ST FGS P + TF + S
Sbjct: 291 GSFGATSTPAFGSTSTPAFGATSTPAFGSTGSPAFGSSGTTFGMSNASVFGTEGTFGASS 350
Query: 709 VPALGSGSSPTFGLGSLTGANSTSTVMLGTSPTCGLGS-STGANNTSTVAFGVNSSQSLD 885
PA G+ SSP F GA+ST + G+SPT G + + G++ T AFG SS
Sbjct: 351 TPAFGTSSSPAF------GASSTPSFSFGSSPTFGQSTPAFGSSPFGTTAFGAQSSPFGS 404
Query: 886 STSTPPFGANNALTFGSGSVTSAGTNSSPAP------SFGLSGTTATGSNSSLTF----- 1032
+STP FG +FG S AP + G SGT G S++
Sbjct: 405 QSSTPAFGTT---SFGQSPFGGQRGGSRVAPYSSTTEADGGSGTQPAGKLESISAMPVYK 461
Query: 1033 GTGSAQXXXXXXXXXXXXXXXXXXXXXXXXXFGLNNTPVN---SSPSFGLNSTPSFGSNS 1203
+ FG++ +P N +S +FG S F S S
Sbjct: 462 DKSHEELRWEDYQLGDKGGPNPASQPSAGIGFGVSTSPSNPFSTSSTFGQTSANPFSSTS 521
Query: 1204 TPSFGLNNSQSFGST 1248
T F L SF ST
Sbjct: 522 TNPFSL-KPPSFNST 535
>XP_017611067.1 PREDICTED: nuclear pore complex protein NUP98A-like isoform X4
[Gossypium arboreum]
Length = 1104
Score = 111 bits (277), Expect = 1e-21
Identities = 93/291 (31%), Positives = 132/291 (45%), Gaps = 11/291 (3%)
Frame = +1
Query: 544 NVPGSFGLSSSSAGPVSAPLF--SSTVQFGSNSIPXXXXXXXXXXXXXXXM-----TFAS 702
+ P G S+ + G +S P F +ST FGS P + TF +
Sbjct: 188 SAPAFGGTSTPAFGSMSTPAFGATSTPAFGSTGSPAFGSTGTAFGVSNAPVFGTGGTFGA 247
Query: 703 GSVPALGSGSSPTFGLGSLTGANSTSTVMLGTSPTCGLGSSTGANNTSTVAFGVNSSQSL 882
S PA G+ S+P FG GS T A S+ SP+ GS+ G + + +FG +S+ +
Sbjct: 248 SSTPAFGTSSTPAFG-GSSTPAFGASS-----SPSFSFGSAFGQSTPAFGSFGASSTPAF 301
Query: 883 DSTSTPPFGANNALTFGSGSVTSAGTNSSPAPSFGLSGTTATGSNSSLTFGTGSAQXXXX 1062
STSTP FG+ + FG+ S + G+ SPA FG SGT SN+S+ FGTG
Sbjct: 302 GSTSTPAFGSTSTPAFGATSTPAFGSTGSPA--FGSSGTAFGMSNASV-FGTGGT----- 353
Query: 1063 XXXXXXXXXXXXXXXXXXXXXFGLNNTP---VNSSPSFGLNSTPSFGSNSTPSFGLNNSQ 1233
FG ++TP +S+P+FG +S+P+FG++STPSF +S
Sbjct: 354 ---------------------FGASSTPAFGTSSTPAFGTSSSPAFGASSTPSFSFGSSP 392
Query: 1234 SFG-STNAXXXXXXXXXXXXXXXXXXXXXXXMPSFGISTSSAPSTVGSTSG 1383
+FG ST A P+FG +TS S G G
Sbjct: 393 TFGQSTPAFGSSPFGTTAFGAQSSPFGSQSSTPAFG-TTSFGQSPFGGQRG 442
Score = 110 bits (274), Expect = 3e-21
Identities = 98/316 (31%), Positives = 136/316 (43%), Gaps = 34/316 (10%)
Frame = +1
Query: 553 GSFGLSSSSAGPVSAPLFSSTVQFGSNSIPXXXXXXXXXXXXXXXMTFASGSVPALGSGS 732
G FG + SS+ FSST FG++S P F S S PA GS S
Sbjct: 60 GVFGSAQSSSP------FSSTTAFGASSSPAFGSSMP---------AFGSSSTPAFGSSS 104
Query: 733 S-----------PTFGLGSLTGANST-STVMLGTSPTCGLG--SSTGANNTSTVAFGVNS 870
S P FG GS T +S + + P G G S+ +ST AFG S
Sbjct: 105 SSFGGSSVFGQKPAFGFGSTTTQSSPYGSTTQQSQPAFGSGIFGSSAPFGSSTPAFGATS 164
Query: 871 SQSLDSTSTPPFGANNALTFGSGSVTSAGTNSSPA------PSFGLSGTTATGSNSSLTF 1032
+ + +TSTP FGA +A FG+ S + G S+PA P+FG + T A GS S F
Sbjct: 165 TPAFGATSTPAFGATSAPAFGATSAPAFGGTSTPAFGSMSTPAFGATSTPAFGSTGSPAF 224
Query: 1033 G-TGSAQXXXXXXXXXXXXXXXXXXXXXXXXXFGLNNTPV---------NSSPSFGLNST 1182
G TG+A FG++N PV +S+P+FG +ST
Sbjct: 225 GSTGTA--------------------------FGVSNAPVFGTGGTFGASSTPAFGTSST 258
Query: 1183 PSFGSNSTPSFGLNNSQSFGSTNAXXXXXXXXXXXXXXXXXXXXXXXMPSFGISTSSAPS 1362
P+FG +STP+FG ++S SF +A P+FG +++ A
Sbjct: 259 PAFGGSSTPAFGASSSPSFSFGSAFGQSTPAFGSFGASSTPAFGSTSTPAFGSTSTPAFG 318
Query: 1363 TVGS----TSGSFVFG 1398
+ ++GS FG
Sbjct: 319 ATSTPAFGSTGSPAFG 334
Score = 108 bits (271), Expect = 7e-21
Identities = 95/310 (30%), Positives = 134/310 (43%), Gaps = 29/310 (9%)
Frame = +1
Query: 556 SFGLSSSSAGPVSAPLF-SSTVQFGSNSIPXXXXXXXXXXXXXXXMTFASG---SVPALG 723
+FG S + G S P F SS+ FG +S+ + S S PA G
Sbjct: 84 AFGSSMPAFGSSSTPAFGSSSSSFGGSSVFGQKPAFGFGSTTTQSSPYGSTTQQSQPAFG 143
Query: 724 SG----------SSPTFGLGSLTGANSTSTVMLG--TSPTCGLGSSTGANNTSTVAFGVN 867
SG S+P FG S +TST G ++P G S+ TST AFG
Sbjct: 144 SGIFGSSAPFGSSTPAFGATSTPAFGATSTPAFGATSAPAFGATSAPAFGGTSTPAFGSM 203
Query: 868 SSQSLDSTSTPPFGANNALTFGSGSVTSAGTNSSP----APSFGLSGTTATGSNSSLTFG 1035
S+ + +TSTP FG+ + FGS + T+ G +++P +FG S T A G++S+ FG
Sbjct: 204 STPAFGATSTPAFGSTGSPAFGS-TGTAFGVSNAPVFGTGGTFGASSTPAFGTSSTPAFG 262
Query: 1036 TGSAQXXXXXXXXXXXXXXXXXXXXXXXXXFGLNNTPV---NSSPSFGLNSTPSFGSNST 1206
S FG ++TP S+P+FG STP+FG+ ST
Sbjct: 263 GSSTPAFGASSSPSFSFGSAFGQSTPAFGSFGASSTPAFGSTSTPAFGSTSTPAFGATST 322
Query: 1207 PSFGLNNSQSFGSTNAXXXXXXXXXXXXXXXXXXXXXXXMPSFGIS------TSSAPSTV 1368
P+FG S +FGS+ P+FG S TSS+P+
Sbjct: 323 PAFGSTGSPAFGSSGT---AFGMSNASVFGTGGTFGASSTPAFGTSSTPAFGTSSSPAFG 379
Query: 1369 GSTSGSFVFG 1398
S++ SF FG
Sbjct: 380 ASSTPSFSFG 389
Score = 79.0 bits (193), Expect = 2e-11
Identities = 69/238 (28%), Positives = 103/238 (43%), Gaps = 11/238 (4%)
Frame = +1
Query: 703 GSVPALGSGSSPTFGLGSLTG-ANSTSTVMLGTSPTCG----LGSSTGAN---NTSTVAF 858
GS G SS F S+ G N+ ++ P+ G GS TG + TST F
Sbjct: 3 GSSSPFGQSSSSPFAAQSVFGQTNNANSNPFAPKPSFGSITPFGSQTGGSIFGGTSTGVF 62
Query: 859 GVNSSQSLDSTSTPPFGANNALTFGSGSVTSAGTNSSPA---PSFGLSGTTATGSNSSLT 1029
G S S S ST FGA+++ FGS S+ + G++S+PA S G++ G +
Sbjct: 63 GSAQSSSPFS-STTAFGASSSPAFGS-SMPAFGSSSTPAFGSSSSSFGGSSVFGQKPAFG 120
Query: 1030 FGTGSAQXXXXXXXXXXXXXXXXXXXXXXXXXFGLNNTPVNSSPSFGLNSTPSFGSNSTP 1209
FG+ + Q FG +S+P+FG STP+FG+ STP
Sbjct: 121 FGSTTTQSSPYGSTTQQSQPAFGSGIFGSSAPFG------SSTPAFGATSTPAFGATSTP 174
Query: 1210 SFGLNNSQSFGSTNAXXXXXXXXXXXXXXXXXXXXXXXMPSFGISTSSAPSTVGSTSG 1383
+FG ++ +FG+T+A P+FG + S A + G+ G
Sbjct: 175 AFGATSAPAFGATSAPAFGGTSTPAFGSMSTPAFGATSTPAFGSTGSPAFGSTGTAFG 232
Score = 69.7 bits (169), Expect = 1e-08
Identities = 77/266 (28%), Positives = 105/266 (39%), Gaps = 32/266 (12%)
Frame = +1
Query: 553 GSFGLSSSSA---------GPVSAPLF--SSTVQFGSNSIPXXXXXXXXXXXXXXXM--- 690
GSFG SS+ A G S P F +ST FGS P +
Sbjct: 291 GSFGASSTPAFGSTSTPAFGSTSTPAFGATSTPAFGSTGSPAFGSSGTAFGMSNASVFGT 350
Query: 691 --TFASGSVPALGSGSSPTFGLGS--LTGANSTSTVMLGTSPTCGLGS-STGANNTSTVA 855
TF + S PA G+ S+P FG S GA+ST + G+SPT G + + G++ T A
Sbjct: 351 GGTFGASSTPAFGTSSTPAFGTSSSPAFGASSTPSFSFGSSPTFGQSTPAFGSSPFGTTA 410
Query: 856 FGVNSSQSLDSTSTPPFGANNALTFGSGSVTSAGTNSSPAP------SFGLSGTTATGSN 1017
FG SS +STP FG +FG S AP + G SGT G
Sbjct: 411 FGAQSSPFGSQSSTPAFGTT---SFGQSPFGGQRGGSRIAPYSSTTEADGGSGTQPAGKL 467
Query: 1018 SSLTF-----GTGSAQXXXXXXXXXXXXXXXXXXXXXXXXXFGLNNTPVNSSPSFGLNST 1182
S++ + FG++ TP N FG +ST
Sbjct: 468 GSISAMPVYKDKSHEELRWEDYQLGDKGGPNPAAQPSAGIGFGVSTTPSN---PFGTSST 524
Query: 1183 PSFGSNSTPS--FGLNNSQSFGSTNA 1254
F +++T S F +S FG T++
Sbjct: 525 FGFTTSATTSNPFQSTSSSLFGQTSS 550
>XP_017611066.1 PREDICTED: nuclear pore complex protein NUP98A-like isoform X3
[Gossypium arboreum]
Length = 1116
Score = 111 bits (277), Expect = 1e-21
Identities = 93/291 (31%), Positives = 132/291 (45%), Gaps = 11/291 (3%)
Frame = +1
Query: 544 NVPGSFGLSSSSAGPVSAPLF--SSTVQFGSNSIPXXXXXXXXXXXXXXXM-----TFAS 702
+ P G S+ + G +S P F +ST FGS P + TF +
Sbjct: 188 SAPAFGGTSTPAFGSMSTPAFGATSTPAFGSTGSPAFGSTGTAFGVSNAPVFGTGGTFGA 247
Query: 703 GSVPALGSGSSPTFGLGSLTGANSTSTVMLGTSPTCGLGSSTGANNTSTVAFGVNSSQSL 882
S PA G+ S+P FG GS T A S+ SP+ GS+ G + + +FG +S+ +
Sbjct: 248 SSTPAFGTSSTPAFG-GSSTPAFGASS-----SPSFSFGSAFGQSTPAFGSFGASSTPAF 301
Query: 883 DSTSTPPFGANNALTFGSGSVTSAGTNSSPAPSFGLSGTTATGSNSSLTFGTGSAQXXXX 1062
STSTP FG+ + FG+ S + G+ SPA FG SGT SN+S+ FGTG
Sbjct: 302 GSTSTPAFGSTSTPAFGATSTPAFGSTGSPA--FGSSGTAFGMSNASV-FGTGGT----- 353
Query: 1063 XXXXXXXXXXXXXXXXXXXXXFGLNNTP---VNSSPSFGLNSTPSFGSNSTPSFGLNNSQ 1233
FG ++TP +S+P+FG +S+P+FG++STPSF +S
Sbjct: 354 ---------------------FGASSTPAFGTSSTPAFGTSSSPAFGASSTPSFSFGSSP 392
Query: 1234 SFG-STNAXXXXXXXXXXXXXXXXXXXXXXXMPSFGISTSSAPSTVGSTSG 1383
+FG ST A P+FG +TS S G G
Sbjct: 393 TFGQSTPAFGSSPFGTTAFGAQSSPFGSQSSTPAFG-TTSFGQSPFGGQRG 442
Score = 110 bits (274), Expect = 3e-21
Identities = 98/316 (31%), Positives = 136/316 (43%), Gaps = 34/316 (10%)
Frame = +1
Query: 553 GSFGLSSSSAGPVSAPLFSSTVQFGSNSIPXXXXXXXXXXXXXXXMTFASGSVPALGSGS 732
G FG + SS+ FSST FG++S P F S S PA GS S
Sbjct: 60 GVFGSAQSSSP------FSSTTAFGASSSPAFGSSMP---------AFGSSSTPAFGSSS 104
Query: 733 S-----------PTFGLGSLTGANST-STVMLGTSPTCGLG--SSTGANNTSTVAFGVNS 870
S P FG GS T +S + + P G G S+ +ST AFG S
Sbjct: 105 SSFGGSSVFGQKPAFGFGSTTTQSSPYGSTTQQSQPAFGSGIFGSSAPFGSSTPAFGATS 164
Query: 871 SQSLDSTSTPPFGANNALTFGSGSVTSAGTNSSPA------PSFGLSGTTATGSNSSLTF 1032
+ + +TSTP FGA +A FG+ S + G S+PA P+FG + T A GS S F
Sbjct: 165 TPAFGATSTPAFGATSAPAFGATSAPAFGGTSTPAFGSMSTPAFGATSTPAFGSTGSPAF 224
Query: 1033 G-TGSAQXXXXXXXXXXXXXXXXXXXXXXXXXFGLNNTPV---------NSSPSFGLNST 1182
G TG+A FG++N PV +S+P+FG +ST
Sbjct: 225 GSTGTA--------------------------FGVSNAPVFGTGGTFGASSTPAFGTSST 258
Query: 1183 PSFGSNSTPSFGLNNSQSFGSTNAXXXXXXXXXXXXXXXXXXXXXXXMPSFGISTSSAPS 1362
P+FG +STP+FG ++S SF +A P+FG +++ A
Sbjct: 259 PAFGGSSTPAFGASSSPSFSFGSAFGQSTPAFGSFGASSTPAFGSTSTPAFGSTSTPAFG 318
Query: 1363 TVGS----TSGSFVFG 1398
+ ++GS FG
Sbjct: 319 ATSTPAFGSTGSPAFG 334
Score = 108 bits (271), Expect = 7e-21
Identities = 95/310 (30%), Positives = 134/310 (43%), Gaps = 29/310 (9%)
Frame = +1
Query: 556 SFGLSSSSAGPVSAPLF-SSTVQFGSNSIPXXXXXXXXXXXXXXXMTFASG---SVPALG 723
+FG S + G S P F SS+ FG +S+ + S S PA G
Sbjct: 84 AFGSSMPAFGSSSTPAFGSSSSSFGGSSVFGQKPAFGFGSTTTQSSPYGSTTQQSQPAFG 143
Query: 724 SG----------SSPTFGLGSLTGANSTSTVMLG--TSPTCGLGSSTGANNTSTVAFGVN 867
SG S+P FG S +TST G ++P G S+ TST AFG
Sbjct: 144 SGIFGSSAPFGSSTPAFGATSTPAFGATSTPAFGATSAPAFGATSAPAFGGTSTPAFGSM 203
Query: 868 SSQSLDSTSTPPFGANNALTFGSGSVTSAGTNSSP----APSFGLSGTTATGSNSSLTFG 1035
S+ + +TSTP FG+ + FGS + T+ G +++P +FG S T A G++S+ FG
Sbjct: 204 STPAFGATSTPAFGSTGSPAFGS-TGTAFGVSNAPVFGTGGTFGASSTPAFGTSSTPAFG 262
Query: 1036 TGSAQXXXXXXXXXXXXXXXXXXXXXXXXXFGLNNTPV---NSSPSFGLNSTPSFGSNST 1206
S FG ++TP S+P+FG STP+FG+ ST
Sbjct: 263 GSSTPAFGASSSPSFSFGSAFGQSTPAFGSFGASSTPAFGSTSTPAFGSTSTPAFGATST 322
Query: 1207 PSFGLNNSQSFGSTNAXXXXXXXXXXXXXXXXXXXXXXXMPSFGIS------TSSAPSTV 1368
P+FG S +FGS+ P+FG S TSS+P+
Sbjct: 323 PAFGSTGSPAFGSSGT---AFGMSNASVFGTGGTFGASSTPAFGTSSTPAFGTSSSPAFG 379
Query: 1369 GSTSGSFVFG 1398
S++ SF FG
Sbjct: 380 ASSTPSFSFG 389
Score = 79.0 bits (193), Expect = 2e-11
Identities = 69/238 (28%), Positives = 103/238 (43%), Gaps = 11/238 (4%)
Frame = +1
Query: 703 GSVPALGSGSSPTFGLGSLTG-ANSTSTVMLGTSPTCG----LGSSTGAN---NTSTVAF 858
GS G SS F S+ G N+ ++ P+ G GS TG + TST F
Sbjct: 3 GSSSPFGQSSSSPFAAQSVFGQTNNANSNPFAPKPSFGSITPFGSQTGGSIFGGTSTGVF 62
Query: 859 GVNSSQSLDSTSTPPFGANNALTFGSGSVTSAGTNSSPA---PSFGLSGTTATGSNSSLT 1029
G S S S ST FGA+++ FGS S+ + G++S+PA S G++ G +
Sbjct: 63 GSAQSSSPFS-STTAFGASSSPAFGS-SMPAFGSSSTPAFGSSSSSFGGSSVFGQKPAFG 120
Query: 1030 FGTGSAQXXXXXXXXXXXXXXXXXXXXXXXXXFGLNNTPVNSSPSFGLNSTPSFGSNSTP 1209
FG+ + Q FG +S+P+FG STP+FG+ STP
Sbjct: 121 FGSTTTQSSPYGSTTQQSQPAFGSGIFGSSAPFG------SSTPAFGATSTPAFGATSTP 174
Query: 1210 SFGLNNSQSFGSTNAXXXXXXXXXXXXXXXXXXXXXXXMPSFGISTSSAPSTVGSTSG 1383
+FG ++ +FG+T+A P+FG + S A + G+ G
Sbjct: 175 AFGATSAPAFGATSAPAFGGTSTPAFGSMSTPAFGATSTPAFGSTGSPAFGSTGTAFG 232
Score = 70.1 bits (170), Expect = 1e-08
Identities = 78/265 (29%), Positives = 102/265 (38%), Gaps = 33/265 (12%)
Frame = +1
Query: 553 GSFGLSSSSA---------GPVSAPLF--SSTVQFGSNSIPXXXXXXXXXXXXXXXM--- 690
GSFG SS+ A G S P F +ST FGS P +
Sbjct: 291 GSFGASSTPAFGSTSTPAFGSTSTPAFGATSTPAFGSTGSPAFGSSGTAFGMSNASVFGT 350
Query: 691 --TFASGSVPALGSGSSPTFGLGS--LTGANSTSTVMLGTSPTCGLGS-STGANNTSTVA 855
TF + S PA G+ S+P FG S GA+ST + G+SPT G + + G++ T A
Sbjct: 351 GGTFGASSTPAFGTSSTPAFGTSSSPAFGASSTPSFSFGSSPTFGQSTPAFGSSPFGTTA 410
Query: 856 FGVNSSQSLDSTSTPPFGANNALTFGSGSVTSAGTNSSPAP------SFGLSGTTATGSN 1017
FG SS +STP FG +FG S AP + G SGT G
Sbjct: 411 FGAQSSPFGSQSSTPAFGTT---SFGQSPFGGQRGGSRIAPYSSTTEADGGSGTQPAGKL 467
Query: 1018 SSLTF-----GTGSAQXXXXXXXXXXXXXXXXXXXXXXXXXFGLNNTPVN---SSPSFGL 1173
S++ + FG++ TP N +S +FG
Sbjct: 468 GSISAMPVYKDKSHEELRWEDYQLGDKGGPNPAAQPSAGIGFGVSTTPSNPFGTSSTFGQ 527
Query: 1174 NSTPSFGSNSTPSFGLNNSQSFGST 1248
S F S S+ F L SF ST
Sbjct: 528 TSANPFSSTSSNPFSL-KPPSFNST 551
>XP_017611065.1 PREDICTED: nuclear pore complex protein NUP98A-like isoform X2
[Gossypium arboreum]
Length = 1128
Score = 111 bits (277), Expect = 1e-21
Identities = 93/291 (31%), Positives = 132/291 (45%), Gaps = 11/291 (3%)
Frame = +1
Query: 544 NVPGSFGLSSSSAGPVSAPLF--SSTVQFGSNSIPXXXXXXXXXXXXXXXM-----TFAS 702
+ P G S+ + G +S P F +ST FGS P + TF +
Sbjct: 188 SAPAFGGTSTPAFGSMSTPAFGATSTPAFGSTGSPAFGSTGTAFGVSNAPVFGTGGTFGA 247
Query: 703 GSVPALGSGSSPTFGLGSLTGANSTSTVMLGTSPTCGLGSSTGANNTSTVAFGVNSSQSL 882
S PA G+ S+P FG GS T A S+ SP+ GS+ G + + +FG +S+ +
Sbjct: 248 SSTPAFGTSSTPAFG-GSSTPAFGASS-----SPSFSFGSAFGQSTPAFGSFGASSTPAF 301
Query: 883 DSTSTPPFGANNALTFGSGSVTSAGTNSSPAPSFGLSGTTATGSNSSLTFGTGSAQXXXX 1062
STSTP FG+ + FG+ S + G+ SPA FG SGT SN+S+ FGTG
Sbjct: 302 GSTSTPAFGSTSTPAFGATSTPAFGSTGSPA--FGSSGTAFGMSNASV-FGTGGT----- 353
Query: 1063 XXXXXXXXXXXXXXXXXXXXXFGLNNTP---VNSSPSFGLNSTPSFGSNSTPSFGLNNSQ 1233
FG ++TP +S+P+FG +S+P+FG++STPSF +S
Sbjct: 354 ---------------------FGASSTPAFGTSSTPAFGTSSSPAFGASSTPSFSFGSSP 392
Query: 1234 SFG-STNAXXXXXXXXXXXXXXXXXXXXXXXMPSFGISTSSAPSTVGSTSG 1383
+FG ST A P+FG +TS S G G
Sbjct: 393 TFGQSTPAFGSSPFGTTAFGAQSSPFGSQSSTPAFG-TTSFGQSPFGGQRG 442
Score = 110 bits (274), Expect = 3e-21
Identities = 98/316 (31%), Positives = 136/316 (43%), Gaps = 34/316 (10%)
Frame = +1
Query: 553 GSFGLSSSSAGPVSAPLFSSTVQFGSNSIPXXXXXXXXXXXXXXXMTFASGSVPALGSGS 732
G FG + SS+ FSST FG++S P F S S PA GS S
Sbjct: 60 GVFGSAQSSSP------FSSTTAFGASSSPAFGSSMP---------AFGSSSTPAFGSSS 104
Query: 733 S-----------PTFGLGSLTGANST-STVMLGTSPTCGLG--SSTGANNTSTVAFGVNS 870
S P FG GS T +S + + P G G S+ +ST AFG S
Sbjct: 105 SSFGGSSVFGQKPAFGFGSTTTQSSPYGSTTQQSQPAFGSGIFGSSAPFGSSTPAFGATS 164
Query: 871 SQSLDSTSTPPFGANNALTFGSGSVTSAGTNSSPA------PSFGLSGTTATGSNSSLTF 1032
+ + +TSTP FGA +A FG+ S + G S+PA P+FG + T A GS S F
Sbjct: 165 TPAFGATSTPAFGATSAPAFGATSAPAFGGTSTPAFGSMSTPAFGATSTPAFGSTGSPAF 224
Query: 1033 G-TGSAQXXXXXXXXXXXXXXXXXXXXXXXXXFGLNNTPV---------NSSPSFGLNST 1182
G TG+A FG++N PV +S+P+FG +ST
Sbjct: 225 GSTGTA--------------------------FGVSNAPVFGTGGTFGASSTPAFGTSST 258
Query: 1183 PSFGSNSTPSFGLNNSQSFGSTNAXXXXXXXXXXXXXXXXXXXXXXXMPSFGISTSSAPS 1362
P+FG +STP+FG ++S SF +A P+FG +++ A
Sbjct: 259 PAFGGSSTPAFGASSSPSFSFGSAFGQSTPAFGSFGASSTPAFGSTSTPAFGSTSTPAFG 318
Query: 1363 TVGS----TSGSFVFG 1398
+ ++GS FG
Sbjct: 319 ATSTPAFGSTGSPAFG 334
Score = 108 bits (271), Expect = 7e-21
Identities = 95/310 (30%), Positives = 134/310 (43%), Gaps = 29/310 (9%)
Frame = +1
Query: 556 SFGLSSSSAGPVSAPLF-SSTVQFGSNSIPXXXXXXXXXXXXXXXMTFASG---SVPALG 723
+FG S + G S P F SS+ FG +S+ + S S PA G
Sbjct: 84 AFGSSMPAFGSSSTPAFGSSSSSFGGSSVFGQKPAFGFGSTTTQSSPYGSTTQQSQPAFG 143
Query: 724 SG----------SSPTFGLGSLTGANSTSTVMLG--TSPTCGLGSSTGANNTSTVAFGVN 867
SG S+P FG S +TST G ++P G S+ TST AFG
Sbjct: 144 SGIFGSSAPFGSSTPAFGATSTPAFGATSTPAFGATSAPAFGATSAPAFGGTSTPAFGSM 203
Query: 868 SSQSLDSTSTPPFGANNALTFGSGSVTSAGTNSSP----APSFGLSGTTATGSNSSLTFG 1035
S+ + +TSTP FG+ + FGS + T+ G +++P +FG S T A G++S+ FG
Sbjct: 204 STPAFGATSTPAFGSTGSPAFGS-TGTAFGVSNAPVFGTGGTFGASSTPAFGTSSTPAFG 262
Query: 1036 TGSAQXXXXXXXXXXXXXXXXXXXXXXXXXFGLNNTPV---NSSPSFGLNSTPSFGSNST 1206
S FG ++TP S+P+FG STP+FG+ ST
Sbjct: 263 GSSTPAFGASSSPSFSFGSAFGQSTPAFGSFGASSTPAFGSTSTPAFGSTSTPAFGATST 322
Query: 1207 PSFGLNNSQSFGSTNAXXXXXXXXXXXXXXXXXXXXXXXMPSFGIS------TSSAPSTV 1368
P+FG S +FGS+ P+FG S TSS+P+
Sbjct: 323 PAFGSTGSPAFGSSGT---AFGMSNASVFGTGGTFGASSTPAFGTSSTPAFGTSSSPAFG 379
Query: 1369 GSTSGSFVFG 1398
S++ SF FG
Sbjct: 380 ASSTPSFSFG 389
Score = 79.0 bits (193), Expect = 2e-11
Identities = 69/238 (28%), Positives = 103/238 (43%), Gaps = 11/238 (4%)
Frame = +1
Query: 703 GSVPALGSGSSPTFGLGSLTG-ANSTSTVMLGTSPTCG----LGSSTGAN---NTSTVAF 858
GS G SS F S+ G N+ ++ P+ G GS TG + TST F
Sbjct: 3 GSSSPFGQSSSSPFAAQSVFGQTNNANSNPFAPKPSFGSITPFGSQTGGSIFGGTSTGVF 62
Query: 859 GVNSSQSLDSTSTPPFGANNALTFGSGSVTSAGTNSSPA---PSFGLSGTTATGSNSSLT 1029
G S S S ST FGA+++ FGS S+ + G++S+PA S G++ G +
Sbjct: 63 GSAQSSSPFS-STTAFGASSSPAFGS-SMPAFGSSSTPAFGSSSSSFGGSSVFGQKPAFG 120
Query: 1030 FGTGSAQXXXXXXXXXXXXXXXXXXXXXXXXXFGLNNTPVNSSPSFGLNSTPSFGSNSTP 1209
FG+ + Q FG +S+P+FG STP+FG+ STP
Sbjct: 121 FGSTTTQSSPYGSTTQQSQPAFGSGIFGSSAPFG------SSTPAFGATSTPAFGATSTP 174
Query: 1210 SFGLNNSQSFGSTNAXXXXXXXXXXXXXXXXXXXXXXXMPSFGISTSSAPSTVGSTSG 1383
+FG ++ +FG+T+A P+FG + S A + G+ G
Sbjct: 175 AFGATSAPAFGATSAPAFGGTSTPAFGSMSTPAFGATSTPAFGSTGSPAFGSTGTAFG 232
Score = 70.1 bits (170), Expect = 1e-08
Identities = 78/265 (29%), Positives = 102/265 (38%), Gaps = 33/265 (12%)
Frame = +1
Query: 553 GSFGLSSSSA---------GPVSAPLF--SSTVQFGSNSIPXXXXXXXXXXXXXXXM--- 690
GSFG SS+ A G S P F +ST FGS P +
Sbjct: 291 GSFGASSTPAFGSTSTPAFGSTSTPAFGATSTPAFGSTGSPAFGSSGTAFGMSNASVFGT 350
Query: 691 --TFASGSVPALGSGSSPTFGLGS--LTGANSTSTVMLGTSPTCGLGS-STGANNTSTVA 855
TF + S PA G+ S+P FG S GA+ST + G+SPT G + + G++ T A
Sbjct: 351 GGTFGASSTPAFGTSSTPAFGTSSSPAFGASSTPSFSFGSSPTFGQSTPAFGSSPFGTTA 410
Query: 856 FGVNSSQSLDSTSTPPFGANNALTFGSGSVTSAGTNSSPAP------SFGLSGTTATGSN 1017
FG SS +STP FG +FG S AP + G SGT G
Sbjct: 411 FGAQSSPFGSQSSTPAFGTT---SFGQSPFGGQRGGSRIAPYSSTTEADGGSGTQPAGKL 467
Query: 1018 SSLTF-----GTGSAQXXXXXXXXXXXXXXXXXXXXXXXXXFGLNNTPVN---SSPSFGL 1173
S++ + FG++ TP N +S +FG
Sbjct: 468 GSISAMPVYKDKSHEELRWEDYQLGDKGGPNPAAQPSAGIGFGVSTTPSNPFGTSSTFGQ 527
Query: 1174 NSTPSFGSNSTPSFGLNNSQSFGST 1248
S F S S+ F L SF ST
Sbjct: 528 TSANPFSSTSSNPFSL-KPPSFNST 551
>XP_012488654.1 PREDICTED: nuclear pore complex protein NUP98A-like isoform X5
[Gossypium raimondii]
Length = 1129
Score = 111 bits (277), Expect = 1e-21
Identities = 98/314 (31%), Positives = 133/314 (42%), Gaps = 40/314 (12%)
Frame = +1
Query: 553 GSFGLSSSSAGPVSAPLFSSTVQFGSNSIPXXXXXXXXXXXXXXXMTFASGSVPALGS-- 726
G FG + SS+ FSST FG++S P F S S PA GS
Sbjct: 60 GVFGSAQSSSP------FSSTTAFGASSSPAFGSSMP---------AFGSSSTPAFGSSA 104
Query: 727 ---------GSSPTFGLGSLTGANST------------------STVMLGTS-PTCGLGS 822
G P FG GS T +S S+V G+S P G S
Sbjct: 105 SSFGGSSVFGQKPAFGFGSTTTQSSPFGSTTQQSQPAFGSGIFGSSVPFGSSTPAFGATS 164
Query: 823 STGANNTSTVAFGVNSSQSLDSTSTPPFGANNALTFGSGSVTSAGTNSSPAPSFGLSGTT 1002
++ TST AFG S+ + +TSTP FGA +A FG S + G+ S+PA FG + T
Sbjct: 165 TSAFGATSTPAFGATSAPAFGATSTPSFGATSAPAFGGTSTPAFGSMSTPA--FGATSTP 222
Query: 1003 ATGSNSSLTFG-TGSAQXXXXXXXXXXXXXXXXXXXXXXXXXFGLNNTPV---------N 1152
A GS S FG TG+A FG++N PV +
Sbjct: 223 AFGSTGSPAFGSTGTA--------------------------FGVSNAPVFGTGGTFGAS 256
Query: 1153 SSPSFGLNSTPSFGSNSTPSFGLNNSQSFGSTNAXXXXXXXXXXXXXXXXXXXXXXXMPS 1332
S+P+FG +STP+FG +STP+FG ++S SF +A P+
Sbjct: 257 STPAFGTSSTPAFGGSSTPAFGASSSPSFSFGSAFGQSTPAFGSFGATSTPAFGSTSTPA 316
Query: 1333 FGISTSSAPSTVGS 1374
FG +++ A + GS
Sbjct: 317 FGATSTPAFGSTGS 330
Score = 108 bits (269), Expect = 1e-20
Identities = 94/304 (30%), Positives = 130/304 (42%), Gaps = 28/304 (9%)
Frame = +1
Query: 556 SFGLSSSSA-GPVSAPLFSSTVQ--FGSNSIPXXXXXXXXXXXXXXXMTFASGSVPALGS 726
+FG +S+SA G S P F +T FG+ S P F S S PA G+
Sbjct: 159 AFGATSTSAFGATSTPAFGATSAPAFGATSTPSFGATSAPAFGGTSTPAFGSMSTPAFGA 218
Query: 727 GSSPTFGLGSLTGANSTSTVM-LGTSPTCGLGSSTGANNTSTVAFGVNSSQSLDSTSTPP 903
S+P FG ST T + +P G G + GA+ ST AFG +S+ + +STP
Sbjct: 219 TSTPAFGSTGSPAFGSTGTAFGVSNAPVFGTGGTFGAS--STPAFGTSSTPAFGGSSTPA 276
Query: 904 FGANNALTFGSGSVT--------SAGTNSSPA------PSFGLSGTTATGSNSSLTFGTG 1041
FGA+++ +F GS S G S+PA P+FG + T A GS S FG+
Sbjct: 277 FGASSSPSFSFGSAFGQSTPAFGSFGATSTPAFGSTSTPAFGATSTPAFGSTGSPAFGSS 336
Query: 1042 SAQXXXXXXXXXXXXXXXXXXXXXXXXXFGLNNTPV---------NSSPSFGLNSTPSFG 1194
FG++N V +S+P+FG +S+P+FG
Sbjct: 337 GTA-------------------------FGMSNASVFGTEGTFGASSTPAFGTSSSPAFG 371
Query: 1195 SNSTPSFGLNNSQSFG-STNAXXXXXXXXXXXXXXXXXXXXXXXMPSFGISTSSAPSTVG 1371
++STPSF +S +FG ST A P+FG STS S G
Sbjct: 372 ASSTPSFSFGSSPTFGQSTPAFGSSPFGTTAFGAQSSPFGSQSSTPAFG-STSFGQSPFG 430
Query: 1372 STSG 1383
G
Sbjct: 431 GQRG 434
Score = 102 bits (254), Expect = 8e-19
Identities = 94/311 (30%), Positives = 129/311 (41%), Gaps = 30/311 (9%)
Frame = +1
Query: 556 SFGLSSSSAGPVSAPLF-SSTVQFGSNSIPXXXXXXXXXXXXXXXMTFASG---SVPALG 723
+FG S + G S P F SS FG +S+ F S S PA G
Sbjct: 84 AFGSSMPAFGSSSTPAFGSSASSFGGSSVFGQKPAFGFGSTTTQSSPFGSTTQQSQPAFG 143
Query: 724 SG---SSPTFGLGSLT-GANSTSTVMLGTSPTCGLGSSTGANNTSTVAFGVNSSQSLDST 891
SG SS FG + GA STS ++P G S+ TST +FG S+ + T
Sbjct: 144 SGIFGSSVPFGSSTPAFGATSTSAFGATSTPAFGATSAPAFGATSTPSFGATSAPAFGGT 203
Query: 892 STPPFGANNALTFGSGSVTSAGTNSSPA-------------------PSFGLSGTTATGS 1014
STP FG+ + FG+ S + G+ SPA +FG S T A G+
Sbjct: 204 STPAFGSMSTPAFGATSTPAFGSTGSPAFGSTGTAFGVSNAPVFGTGGTFGASSTPAFGT 263
Query: 1015 NSSLTFGTGSAQXXXXXXXXXXXXXXXXXXXXXXXXXFGLNNTPV---NSSPSFGLNSTP 1185
+S+ FG S FG +TP S+P+FG STP
Sbjct: 264 SSTPAFGGSSTPAFGASSSPSFSFGSAFGQSTPAFGSFGATSTPAFGSTSTPAFGATSTP 323
Query: 1186 SFGSNSTPSFGLNNSQSFGSTNAXXXXXXXXXXXXXXXXXXXXXXXMPSFGISTSSAPST 1365
+FGS +P+FG ++ +FG +NA P+FG TSS+P+
Sbjct: 324 AFGSTGSPAFG-SSGTAFGMSNA----------SVFGTEGTFGASSTPAFG--TSSSPAF 370
Query: 1366 VGSTSGSFVFG 1398
S++ SF FG
Sbjct: 371 GASSTPSFSFG 381
>XP_017611063.1 PREDICTED: nuclear pore complex protein NUP98A-like isoform X1
[Gossypium arboreum]
Length = 1130
Score = 111 bits (277), Expect = 1e-21
Identities = 93/291 (31%), Positives = 132/291 (45%), Gaps = 11/291 (3%)
Frame = +1
Query: 544 NVPGSFGLSSSSAGPVSAPLF--SSTVQFGSNSIPXXXXXXXXXXXXXXXM-----TFAS 702
+ P G S+ + G +S P F +ST FGS P + TF +
Sbjct: 188 SAPAFGGTSTPAFGSMSTPAFGATSTPAFGSTGSPAFGSTGTAFGVSNAPVFGTGGTFGA 247
Query: 703 GSVPALGSGSSPTFGLGSLTGANSTSTVMLGTSPTCGLGSSTGANNTSTVAFGVNSSQSL 882
S PA G+ S+P FG GS T A S+ SP+ GS+ G + + +FG +S+ +
Sbjct: 248 SSTPAFGTSSTPAFG-GSSTPAFGASS-----SPSFSFGSAFGQSTPAFGSFGASSTPAF 301
Query: 883 DSTSTPPFGANNALTFGSGSVTSAGTNSSPAPSFGLSGTTATGSNSSLTFGTGSAQXXXX 1062
STSTP FG+ + FG+ S + G+ SPA FG SGT SN+S+ FGTG
Sbjct: 302 GSTSTPAFGSTSTPAFGATSTPAFGSTGSPA--FGSSGTAFGMSNASV-FGTGGT----- 353
Query: 1063 XXXXXXXXXXXXXXXXXXXXXFGLNNTP---VNSSPSFGLNSTPSFGSNSTPSFGLNNSQ 1233
FG ++TP +S+P+FG +S+P+FG++STPSF +S
Sbjct: 354 ---------------------FGASSTPAFGTSSTPAFGTSSSPAFGASSTPSFSFGSSP 392
Query: 1234 SFG-STNAXXXXXXXXXXXXXXXXXXXXXXXMPSFGISTSSAPSTVGSTSG 1383
+FG ST A P+FG +TS S G G
Sbjct: 393 TFGQSTPAFGSSPFGTTAFGAQSSPFGSQSSTPAFG-TTSFGQSPFGGQRG 442
Score = 110 bits (274), Expect = 3e-21
Identities = 98/316 (31%), Positives = 136/316 (43%), Gaps = 34/316 (10%)
Frame = +1
Query: 553 GSFGLSSSSAGPVSAPLFSSTVQFGSNSIPXXXXXXXXXXXXXXXMTFASGSVPALGSGS 732
G FG + SS+ FSST FG++S P F S S PA GS S
Sbjct: 60 GVFGSAQSSSP------FSSTTAFGASSSPAFGSSMP---------AFGSSSTPAFGSSS 104
Query: 733 S-----------PTFGLGSLTGANST-STVMLGTSPTCGLG--SSTGANNTSTVAFGVNS 870
S P FG GS T +S + + P G G S+ +ST AFG S
Sbjct: 105 SSFGGSSVFGQKPAFGFGSTTTQSSPYGSTTQQSQPAFGSGIFGSSAPFGSSTPAFGATS 164
Query: 871 SQSLDSTSTPPFGANNALTFGSGSVTSAGTNSSPA------PSFGLSGTTATGSNSSLTF 1032
+ + +TSTP FGA +A FG+ S + G S+PA P+FG + T A GS S F
Sbjct: 165 TPAFGATSTPAFGATSAPAFGATSAPAFGGTSTPAFGSMSTPAFGATSTPAFGSTGSPAF 224
Query: 1033 G-TGSAQXXXXXXXXXXXXXXXXXXXXXXXXXFGLNNTPV---------NSSPSFGLNST 1182
G TG+A FG++N PV +S+P+FG +ST
Sbjct: 225 GSTGTA--------------------------FGVSNAPVFGTGGTFGASSTPAFGTSST 258
Query: 1183 PSFGSNSTPSFGLNNSQSFGSTNAXXXXXXXXXXXXXXXXXXXXXXXMPSFGISTSSAPS 1362
P+FG +STP+FG ++S SF +A P+FG +++ A
Sbjct: 259 PAFGGSSTPAFGASSSPSFSFGSAFGQSTPAFGSFGASSTPAFGSTSTPAFGSTSTPAFG 318
Query: 1363 TVGS----TSGSFVFG 1398
+ ++GS FG
Sbjct: 319 ATSTPAFGSTGSPAFG 334
Score = 108 bits (271), Expect = 7e-21
Identities = 95/310 (30%), Positives = 134/310 (43%), Gaps = 29/310 (9%)
Frame = +1
Query: 556 SFGLSSSSAGPVSAPLF-SSTVQFGSNSIPXXXXXXXXXXXXXXXMTFASG---SVPALG 723
+FG S + G S P F SS+ FG +S+ + S S PA G
Sbjct: 84 AFGSSMPAFGSSSTPAFGSSSSSFGGSSVFGQKPAFGFGSTTTQSSPYGSTTQQSQPAFG 143
Query: 724 SG----------SSPTFGLGSLTGANSTSTVMLG--TSPTCGLGSSTGANNTSTVAFGVN 867
SG S+P FG S +TST G ++P G S+ TST AFG
Sbjct: 144 SGIFGSSAPFGSSTPAFGATSTPAFGATSTPAFGATSAPAFGATSAPAFGGTSTPAFGSM 203
Query: 868 SSQSLDSTSTPPFGANNALTFGSGSVTSAGTNSSP----APSFGLSGTTATGSNSSLTFG 1035
S+ + +TSTP FG+ + FGS + T+ G +++P +FG S T A G++S+ FG
Sbjct: 204 STPAFGATSTPAFGSTGSPAFGS-TGTAFGVSNAPVFGTGGTFGASSTPAFGTSSTPAFG 262
Query: 1036 TGSAQXXXXXXXXXXXXXXXXXXXXXXXXXFGLNNTPV---NSSPSFGLNSTPSFGSNST 1206
S FG ++TP S+P+FG STP+FG+ ST
Sbjct: 263 GSSTPAFGASSSPSFSFGSAFGQSTPAFGSFGASSTPAFGSTSTPAFGSTSTPAFGATST 322
Query: 1207 PSFGLNNSQSFGSTNAXXXXXXXXXXXXXXXXXXXXXXXMPSFGIS------TSSAPSTV 1368
P+FG S +FGS+ P+FG S TSS+P+
Sbjct: 323 PAFGSTGSPAFGSSGT---AFGMSNASVFGTGGTFGASSTPAFGTSSTPAFGTSSSPAFG 379
Query: 1369 GSTSGSFVFG 1398
S++ SF FG
Sbjct: 380 ASSTPSFSFG 389
Score = 79.0 bits (193), Expect = 2e-11
Identities = 69/238 (28%), Positives = 103/238 (43%), Gaps = 11/238 (4%)
Frame = +1
Query: 703 GSVPALGSGSSPTFGLGSLTG-ANSTSTVMLGTSPTCG----LGSSTGAN---NTSTVAF 858
GS G SS F S+ G N+ ++ P+ G GS TG + TST F
Sbjct: 3 GSSSPFGQSSSSPFAAQSVFGQTNNANSNPFAPKPSFGSITPFGSQTGGSIFGGTSTGVF 62
Query: 859 GVNSSQSLDSTSTPPFGANNALTFGSGSVTSAGTNSSPA---PSFGLSGTTATGSNSSLT 1029
G S S S ST FGA+++ FGS S+ + G++S+PA S G++ G +
Sbjct: 63 GSAQSSSPFS-STTAFGASSSPAFGS-SMPAFGSSSTPAFGSSSSSFGGSSVFGQKPAFG 120
Query: 1030 FGTGSAQXXXXXXXXXXXXXXXXXXXXXXXXXFGLNNTPVNSSPSFGLNSTPSFGSNSTP 1209
FG+ + Q FG +S+P+FG STP+FG+ STP
Sbjct: 121 FGSTTTQSSPYGSTTQQSQPAFGSGIFGSSAPFG------SSTPAFGATSTPAFGATSTP 174
Query: 1210 SFGLNNSQSFGSTNAXXXXXXXXXXXXXXXXXXXXXXXMPSFGISTSSAPSTVGSTSG 1383
+FG ++ +FG+T+A P+FG + S A + G+ G
Sbjct: 175 AFGATSAPAFGATSAPAFGGTSTPAFGSMSTPAFGATSTPAFGSTGSPAFGSTGTAFG 232
Score = 70.1 bits (170), Expect = 1e-08
Identities = 78/265 (29%), Positives = 102/265 (38%), Gaps = 33/265 (12%)
Frame = +1
Query: 553 GSFGLSSSSA---------GPVSAPLF--SSTVQFGSNSIPXXXXXXXXXXXXXXXM--- 690
GSFG SS+ A G S P F +ST FGS P +
Sbjct: 291 GSFGASSTPAFGSTSTPAFGSTSTPAFGATSTPAFGSTGSPAFGSSGTAFGMSNASVFGT 350
Query: 691 --TFASGSVPALGSGSSPTFGLGS--LTGANSTSTVMLGTSPTCGLGS-STGANNTSTVA 855
TF + S PA G+ S+P FG S GA+ST + G+SPT G + + G++ T A
Sbjct: 351 GGTFGASSTPAFGTSSTPAFGTSSSPAFGASSTPSFSFGSSPTFGQSTPAFGSSPFGTTA 410
Query: 856 FGVNSSQSLDSTSTPPFGANNALTFGSGSVTSAGTNSSPAP------SFGLSGTTATGSN 1017
FG SS +STP FG +FG S AP + G SGT G
Sbjct: 411 FGAQSSPFGSQSSTPAFGTT---SFGQSPFGGQRGGSRIAPYSSTTEADGGSGTQPAGKL 467
Query: 1018 SSLTF-----GTGSAQXXXXXXXXXXXXXXXXXXXXXXXXXFGLNNTPVN---SSPSFGL 1173
S++ + FG++ TP N +S +FG
Sbjct: 468 GSISAMPVYKDKSHEELRWEDYQLGDKGGPNPAAQPSAGIGFGVSTTPSNPFGTSSTFGQ 527
Query: 1174 NSTPSFGSNSTPSFGLNNSQSFGST 1248
S F S S+ F L SF ST
Sbjct: 528 TSANPFSSTSSNPFSL-KPPSFNST 551
>KHG09356.1 Nuclear pore complex Nup98-Nup96 [Gossypium arboreum]
Length = 1150
Score = 111 bits (277), Expect = 1e-21
Identities = 93/291 (31%), Positives = 132/291 (45%), Gaps = 11/291 (3%)
Frame = +1
Query: 544 NVPGSFGLSSSSAGPVSAPLF--SSTVQFGSNSIPXXXXXXXXXXXXXXXM-----TFAS 702
+ P G S+ + G +S P F +ST FGS P + TF +
Sbjct: 188 SAPAFGGTSTPAFGSMSTPAFGATSTPAFGSTGSPAFGSTGTAFGVSNAPVFGTGGTFGA 247
Query: 703 GSVPALGSGSSPTFGLGSLTGANSTSTVMLGTSPTCGLGSSTGANNTSTVAFGVNSSQSL 882
S PA G+ S+P FG GS T A S+ SP+ GS+ G + + +FG +S+ +
Sbjct: 248 SSTPAFGTSSTPAFG-GSSTPAFGASS-----SPSFSFGSAFGQSTPAFGSFGASSTPAF 301
Query: 883 DSTSTPPFGANNALTFGSGSVTSAGTNSSPAPSFGLSGTTATGSNSSLTFGTGSAQXXXX 1062
STSTP FG+ + FG+ S + G+ SPA FG SGT SN+S+ FGTG
Sbjct: 302 GSTSTPAFGSTSTPAFGATSTPAFGSTGSPA--FGSSGTAFGMSNASV-FGTGGT----- 353
Query: 1063 XXXXXXXXXXXXXXXXXXXXXFGLNNTP---VNSSPSFGLNSTPSFGSNSTPSFGLNNSQ 1233
FG ++TP +S+P+FG +S+P+FG++STPSF +S
Sbjct: 354 ---------------------FGASSTPAFGTSSTPAFGTSSSPAFGASSTPSFSFGSSP 392
Query: 1234 SFG-STNAXXXXXXXXXXXXXXXXXXXXXXXMPSFGISTSSAPSTVGSTSG 1383
+FG ST A P+FG +TS S G G
Sbjct: 393 TFGQSTPAFGSSPFGTTAFGAQSSPFGSQSSTPAFG-TTSFGQSPFGGQRG 442
Score = 110 bits (274), Expect = 3e-21
Identities = 98/316 (31%), Positives = 136/316 (43%), Gaps = 34/316 (10%)
Frame = +1
Query: 553 GSFGLSSSSAGPVSAPLFSSTVQFGSNSIPXXXXXXXXXXXXXXXMTFASGSVPALGSGS 732
G FG + SS+ FSST FG++S P F S S PA GS S
Sbjct: 60 GVFGSAQSSSP------FSSTTAFGASSSPAFGSSMP---------AFGSSSTPAFGSSS 104
Query: 733 S-----------PTFGLGSLTGANST-STVMLGTSPTCGLG--SSTGANNTSTVAFGVNS 870
S P FG GS T +S + + P G G S+ +ST AFG S
Sbjct: 105 SSFGGSSVFGQKPAFGFGSTTTQSSPYGSTTQQSQPAFGSGIFGSSAPFGSSTPAFGATS 164
Query: 871 SQSLDSTSTPPFGANNALTFGSGSVTSAGTNSSPA------PSFGLSGTTATGSNSSLTF 1032
+ + +TSTP FGA +A FG+ S + G S+PA P+FG + T A GS S F
Sbjct: 165 TPAFGATSTPAFGATSAPAFGATSAPAFGGTSTPAFGSMSTPAFGATSTPAFGSTGSPAF 224
Query: 1033 G-TGSAQXXXXXXXXXXXXXXXXXXXXXXXXXFGLNNTPV---------NSSPSFGLNST 1182
G TG+A FG++N PV +S+P+FG +ST
Sbjct: 225 GSTGTA--------------------------FGVSNAPVFGTGGTFGASSTPAFGTSST 258
Query: 1183 PSFGSNSTPSFGLNNSQSFGSTNAXXXXXXXXXXXXXXXXXXXXXXXMPSFGISTSSAPS 1362
P+FG +STP+FG ++S SF +A P+FG +++ A
Sbjct: 259 PAFGGSSTPAFGASSSPSFSFGSAFGQSTPAFGSFGASSTPAFGSTSTPAFGSTSTPAFG 318
Query: 1363 TVGS----TSGSFVFG 1398
+ ++GS FG
Sbjct: 319 ATSTPAFGSTGSPAFG 334
Score = 108 bits (271), Expect = 7e-21
Identities = 95/310 (30%), Positives = 134/310 (43%), Gaps = 29/310 (9%)
Frame = +1
Query: 556 SFGLSSSSAGPVSAPLF-SSTVQFGSNSIPXXXXXXXXXXXXXXXMTFASG---SVPALG 723
+FG S + G S P F SS+ FG +S+ + S S PA G
Sbjct: 84 AFGSSMPAFGSSSTPAFGSSSSSFGGSSVFGQKPAFGFGSTTTQSSPYGSTTQQSQPAFG 143
Query: 724 SG----------SSPTFGLGSLTGANSTSTVMLG--TSPTCGLGSSTGANNTSTVAFGVN 867
SG S+P FG S +TST G ++P G S+ TST AFG
Sbjct: 144 SGIFGSSAPFGSSTPAFGATSTPAFGATSTPAFGATSAPAFGATSAPAFGGTSTPAFGSM 203
Query: 868 SSQSLDSTSTPPFGANNALTFGSGSVTSAGTNSSP----APSFGLSGTTATGSNSSLTFG 1035
S+ + +TSTP FG+ + FGS + T+ G +++P +FG S T A G++S+ FG
Sbjct: 204 STPAFGATSTPAFGSTGSPAFGS-TGTAFGVSNAPVFGTGGTFGASSTPAFGTSSTPAFG 262
Query: 1036 TGSAQXXXXXXXXXXXXXXXXXXXXXXXXXFGLNNTPV---NSSPSFGLNSTPSFGSNST 1206
S FG ++TP S+P+FG STP+FG+ ST
Sbjct: 263 GSSTPAFGASSSPSFSFGSAFGQSTPAFGSFGASSTPAFGSTSTPAFGSTSTPAFGATST 322
Query: 1207 PSFGLNNSQSFGSTNAXXXXXXXXXXXXXXXXXXXXXXXMPSFGIS------TSSAPSTV 1368
P+FG S +FGS+ P+FG S TSS+P+
Sbjct: 323 PAFGSTGSPAFGSSGT---AFGMSNASVFGTGGTFGASSTPAFGTSSTPAFGTSSSPAFG 379
Query: 1369 GSTSGSFVFG 1398
S++ SF FG
Sbjct: 380 ASSTPSFSFG 389
Score = 79.0 bits (193), Expect = 2e-11
Identities = 69/238 (28%), Positives = 103/238 (43%), Gaps = 11/238 (4%)
Frame = +1
Query: 703 GSVPALGSGSSPTFGLGSLTG-ANSTSTVMLGTSPTCG----LGSSTGAN---NTSTVAF 858
GS G SS F S+ G N+ ++ P+ G GS TG + TST F
Sbjct: 3 GSSSPFGQSSSSPFAAQSVFGQTNNANSNPFAPKPSFGSITPFGSQTGGSIFGGTSTGVF 62
Query: 859 GVNSSQSLDSTSTPPFGANNALTFGSGSVTSAGTNSSPA---PSFGLSGTTATGSNSSLT 1029
G S S S ST FGA+++ FGS S+ + G++S+PA S G++ G +
Sbjct: 63 GSAQSSSPFS-STTAFGASSSPAFGS-SMPAFGSSSTPAFGSSSSSFGGSSVFGQKPAFG 120
Query: 1030 FGTGSAQXXXXXXXXXXXXXXXXXXXXXXXXXFGLNNTPVNSSPSFGLNSTPSFGSNSTP 1209
FG+ + Q FG +S+P+FG STP+FG+ STP
Sbjct: 121 FGSTTTQSSPYGSTTQQSQPAFGSGIFGSSAPFG------SSTPAFGATSTPAFGATSTP 174
Query: 1210 SFGLNNSQSFGSTNAXXXXXXXXXXXXXXXXXXXXXXXMPSFGISTSSAPSTVGSTSG 1383
+FG ++ +FG+T+A P+FG + S A + G+ G
Sbjct: 175 AFGATSAPAFGATSAPAFGGTSTPAFGSMSTPAFGATSTPAFGSTGSPAFGSTGTAFG 232
Score = 70.1 bits (170), Expect = 1e-08
Identities = 78/265 (29%), Positives = 102/265 (38%), Gaps = 33/265 (12%)
Frame = +1
Query: 553 GSFGLSSSSA---------GPVSAPLF--SSTVQFGSNSIPXXXXXXXXXXXXXXXM--- 690
GSFG SS+ A G S P F +ST FGS P +
Sbjct: 291 GSFGASSTPAFGSTSTPAFGSTSTPAFGATSTPAFGSTGSPAFGSSGTAFGMSNASVFGT 350
Query: 691 --TFASGSVPALGSGSSPTFGLGS--LTGANSTSTVMLGTSPTCGLGS-STGANNTSTVA 855
TF + S PA G+ S+P FG S GA+ST + G+SPT G + + G++ T A
Sbjct: 351 GGTFGASSTPAFGTSSTPAFGTSSSPAFGASSTPSFSFGSSPTFGQSTPAFGSSPFGTTA 410
Query: 856 FGVNSSQSLDSTSTPPFGANNALTFGSGSVTSAGTNSSPAP------SFGLSGTTATGSN 1017
FG SS +STP FG +FG S AP + G SGT G
Sbjct: 411 FGAQSSPFGSQSSTPAFGTT---SFGQSPFGGQRGGSRIAPYSSTTEADGGSGTQPAGKL 467
Query: 1018 SSLTF-----GTGSAQXXXXXXXXXXXXXXXXXXXXXXXXXFGLNNTPVN---SSPSFGL 1173
S++ + FG++ TP N +S +FG
Sbjct: 468 GSISAMPVYKDKSHEELRWEDYQLGDKGGPNPAAQPSAGIGFGVSTTPSNPFGTSSTFGQ 527
Query: 1174 NSTPSFGSNSTPSFGLNNSQSFGST 1248
S F S S+ F L SF ST
Sbjct: 528 TSANPFSSTSSNPFSL-KPPSFNST 551
>XP_018822557.1 PREDICTED: nuclear pore complex protein NUP98A [Juglans regia]
XP_018822559.1 PREDICTED: nuclear pore complex protein
NUP98A [Juglans regia]
Length = 1030
Score = 110 bits (276), Expect = 2e-21
Identities = 99/303 (32%), Positives = 141/303 (46%), Gaps = 21/303 (6%)
Frame = +1
Query: 553 GSFGLSSSSAGPVSAPLFSSTVQFGSNSIPXXXXXXXXXXXXXXXMTFASGSVPALGSGS 732
G FG + SS+ FSST FG++S P +F + S PA G GS
Sbjct: 59 GVFGAAQSSSP------FSSTTTFGASSSPAFGSTVP---------SFGASSTPAFG-GS 102
Query: 733 SPTFG-------LGSLTGANSTST-------VMLGTSPTCG---LGSSTGANNTSTVAFG 861
S +FG S G STST T P G GSS+ TS FG
Sbjct: 103 SSSFGGSSVFGQKASFGGFGSTSTPASPFGSTNQQTQPAFGSSIFGSSSPFGATSQPTFG 162
Query: 862 VNSSQSLDSTSTPPFGANNALTFGSGSVTSAGTNSSPAPSFGLSGTTATGSNSSLTFG-T 1038
+S+ + +TSTP FGA +A FG+ S + G+ S+PA FG + T A G+ +S FG T
Sbjct: 163 ASSTPAFGATSTPAFGATSAPAFGATSAPTFGSTSTPA--FGATSTPAFGTTASPAFGST 220
Query: 1039 GSAQXXXXXXXXXXXXXXXXXXXXXXXXXFGLNNTPV---NSSPSFGLNSTPSFGSNSTP 1209
G+A FG ++TP+ +S+P FG +STP+FG++STP
Sbjct: 221 GTA------------FGVSNAPVFGSGGAFGASSTPMFGSSSTPMFGTSSTPAFGTSSTP 268
Query: 1210 SFGLNNSQSFGSTNAXXXXXXXXXXXXXXXXXXXXXXXMPSFGISTSSAPSTVGSTSGSF 1389
+FG +++ +FG+++ P+FG TSS P+ GS++ SF
Sbjct: 269 AFGTSSTPAFGTSST------------------------PAFG--TSSTPAFGGSSTPSF 302
Query: 1390 VFG 1398
FG
Sbjct: 303 SFG 305
Score = 105 bits (263), Expect = 6e-20
Identities = 81/241 (33%), Positives = 110/241 (45%), Gaps = 9/241 (3%)
Frame = +1
Query: 553 GSFGLSSSSAGPVSA------PLFSSTVQFGSNSIPXXXXXXXXXXXXXXXMTFASGSVP 714
G FG +S+ A P + P F S++ FGS+S TF + S P
Sbjct: 119 GGFGSTSTPASPFGSTNQQTQPAFGSSI-FGSSS----------PFGATSQPTFGASSTP 167
Query: 715 ALGSGSSPTFGLGSLTGANSTSTVMLGTSPTCGLGSSTGANNTSTVAFGVNSSQSLDSTS 894
A G+ S+P FG S +TS G++ T G+ TST AFG +S + ST
Sbjct: 168 AFGATSTPAFGATSAPAFGATSAPTFGSTSTPAFGA------TSTPAFGTTASPAFGSTG 221
Query: 895 TPPFGANNALTFGSGSVTSAGTNSSPAPSFGLSGTTATGSNSSLTFGTGSAQXXXXXXXX 1074
T FG +NA FGSG A S P FG S T G++S+ FGT S
Sbjct: 222 TA-FGVSNAPVFGSGGAFGA----SSTPMFGSSSTPMFGTSSTPAFGTSSTPA------- 269
Query: 1075 XXXXXXXXXXXXXXXXXFGLNNTPV---NSSPSFGLNSTPSFGSNSTPSFGLNNSQSFGS 1245
FG ++TP +S+P+FG +STP+FG +STPSF +S FG
Sbjct: 270 -----------------FGTSSTPAFGTSSTPAFGTSSTPAFGGSSTPSFSFGSSPGFGQ 312
Query: 1246 T 1248
+
Sbjct: 313 S 313
Score = 74.3 bits (181), Expect = 5e-10
Identities = 61/175 (34%), Positives = 82/175 (46%), Gaps = 12/175 (6%)
Frame = +1
Query: 556 SFGLSSSSA-GPVSAPLFSSTVQ--FGSNSIPXXXXXXXXXXXXXXXMTFASGSVPALGS 726
+FG +S+ A G SAP F +T FGS S P F S A G
Sbjct: 168 AFGATSTPAFGATSAPAFGATSAPTFGSTSTPAFGATSTPAFGTTASPAFGSTGT-AFGV 226
Query: 727 GSSPTFGLGSLTGANSTSTVMLGTSPTCGLGSSTGANNTSTVAFGVNSSQSLDSTSTPPF 906
++P FG G GA+ST ++P G S+ +ST AFG +S+ + ++STP F
Sbjct: 227 SNAPVFGSGGAFGASSTPMFGSSSTPMFGTSSTPAFGTSSTPAFGTSSTPAFGTSSTPAF 286
Query: 907 GANNALTFGSGSVTSAGTNSSP-----APSFGLS--GTTAT--GSNSSLTFGTGS 1044
G ++ FG S S SSP A +FG + GTT T G+ SS FG S
Sbjct: 287 GTSSTPAFGGSSTPSFSFGSSPGFGQSASTFGSTPFGTTTTPFGAQSS-PFGAQS 340
Score = 73.9 bits (180), Expect = 6e-10
Identities = 59/168 (35%), Positives = 79/168 (47%), Gaps = 7/168 (4%)
Frame = +1
Query: 556 SFGLSSSSAGPVSAPLFSSTVQFGSNSIPXXXXXXXXXXXXXXXMTFASGSVPALGSGSS 735
+FG + ++ G +AP+F S FG++S P F S S P G+ S+
Sbjct: 216 AFGSTGTAFGVSNAPVFGSGGAFGASSTPM----------------FGSSSTPMFGTSST 259
Query: 736 PTFGLGSLTGANSTSTVMLGTSPTCGLGSSTGANNTSTVAFGVNSSQSLDSTSTPPFGAN 915
P FG S ++ST GTS T G+S ST AFG +S+ S S+P FG
Sbjct: 260 PAFGTSSTPAFGTSSTPAFGTSSTPAFGTS------STPAFGGSSTPSFSFGSSPGFG-Q 312
Query: 916 NALTFGS----GSVTSAGTNSSPAPSFGLSGTTATGSNSSL---TFGT 1038
+A TFGS + T G SSP FG TT T +N+ FGT
Sbjct: 313 SASTFGSTPFGTTTTPFGAQSSP---FGAQSTTPTFANTGFGQAAFGT 357
Score = 71.2 bits (173), Expect = 4e-09
Identities = 68/219 (31%), Positives = 92/219 (42%), Gaps = 37/219 (16%)
Frame = +1
Query: 703 GSVPALGSGSSPTFGLGSLTGANST------------STVMLGTSPTCGL--GSSTGANN 840
GS G SS FG S+ G N+ S G+ L G+STG
Sbjct: 3 GSTNPFGQSSSSPFGSPSVFGQNNNANNNPFAPKPFGSPTPFGSQTGASLFGGTSTGVFG 62
Query: 841 --------TSTVAFGVNSSQSLDSTSTPPFGANNALTFGSGSVTSAGTN-SSPAPSFGLS 993
+ST FG +SS + ST P FGA++ FG S + G++ SFG
Sbjct: 63 AAQSSSPFSSTTTFGASSSPAFGST-VPSFGASSTPAFGGSSSSFGGSSVFGQKASFGGF 121
Query: 994 GTTAT-----GSNSSLT---FGT---GSAQXXXXXXXXXXXXXXXXXXXXXXXXXFGLNN 1140
G+T+T GS + T FG+ GS+ FG +
Sbjct: 122 GSTSTPASPFGSTNQQTQPAFGSSIFGSSSPFGATSQPTFGASSTPAFGATSTPAFGATS 181
Query: 1141 TP---VNSSPSFGLNSTPSFGSNSTPSFGLNNSQSFGST 1248
P S+P+FG STP+FG+ STP+FG S +FGST
Sbjct: 182 APAFGATSAPTFGSTSTPAFGATSTPAFGTTASPAFGST 220
>KJB39545.1 hypothetical protein B456_007G018500 [Gossypium raimondii]
Length = 750
Score = 110 bits (274), Expect = 2e-21
Identities = 100/316 (31%), Positives = 134/316 (42%), Gaps = 40/316 (12%)
Frame = +1
Query: 553 GSFGLSSSSAGPVSAPLFSSTVQFGSNSIPXXXXXXXXXXXXXXXMTFASGSVPALGS-- 726
G FG + SS+ FSST FG++S P F S S PA GS
Sbjct: 60 GVFGSAQSSSP------FSSTTAFGASSSPAFGSSMP---------AFGSSSTPAFGSSA 104
Query: 727 ---------GSSPTFGLGSLTGANST------------------STVMLGTS-PTCGLGS 822
G P FG GS T +S S+V G+S P G S
Sbjct: 105 SSFGGSSVFGQKPAFGFGSTTTQSSPFGSTTQQSQPAFGSGIFGSSVPFGSSTPAFGATS 164
Query: 823 STGANNTSTVAFGVNSSQSLDSTSTPPFGANNALTFGSGSVTSAGTNSSPAPSFGLSGTT 1002
++ TST AFG S+ + +TSTP FGA +A FG S + G+ S+PA FG + T
Sbjct: 165 TSAFGATSTPAFGATSAPAFGATSTPSFGATSAPAFGGTSTPAFGSMSTPA--FGATSTP 222
Query: 1003 ATGSNSSLTFG-TGSAQXXXXXXXXXXXXXXXXXXXXXXXXXFGLNNTPV---------N 1152
A GS S FG TG+A FG++N PV +
Sbjct: 223 AFGSTGSPAFGSTGTA--------------------------FGVSNAPVFGTGGTFGAS 256
Query: 1153 SSPSFGLNSTPSFGSNSTPSFGLNNSQSFGSTNAXXXXXXXXXXXXXXXXXXXXXXXMPS 1332
S+P+FG +STP+FG +STP+FG ++S SF +A P+
Sbjct: 257 STPAFGTSSTPAFGGSSTPAFGASSSPSFSFGSAFGQSTPAFGSFGATSTPAFGSTSTPA 316
Query: 1333 FGISTSSAPSTVGSTS 1380
FG +++ A GSTS
Sbjct: 317 FGATSTPA---FGSTS 329
Score = 108 bits (271), Expect = 5e-21
Identities = 93/289 (32%), Positives = 128/289 (44%), Gaps = 9/289 (3%)
Frame = +1
Query: 544 NVPGSFGLSSSSAGPVSAPLF--SSTVQFGSNSIPXXXXXXXXXXXXXXXM-----TFAS 702
+ P G S+ + G +S P F +ST FGS P + TF +
Sbjct: 196 SAPAFGGTSTPAFGSMSTPAFGATSTPAFGSTGSPAFGSTGTAFGVSNAPVFGTGGTFGA 255
Query: 703 GSVPALGSGSSPTFGLGSLTGANSTSTVMLGTSPTCGLGSSTGANNTSTVAFGVNSSQSL 882
S PA G+ S+P FG GS T A S+ SP+ GS+ G + + +FG S+ +
Sbjct: 256 SSTPAFGTSSTPAFG-GSSTPAFGASS-----SPSFSFGSAFGQSTPAFGSFGATSTPAF 309
Query: 883 DSTSTPPFGANNALTFGSGSVTSAGTNSSPAPSFGLSGTTATGSNSSLTFGTGSAQXXXX 1062
STSTP FGA + FGS S+ + G S+PA FG +G+ A GS S FG +A
Sbjct: 310 GSTSTPAFGATSTPAFGSTSIPAFGATSTPA--FGSTGSPAFGS-SGTAFGMSNAS---- 362
Query: 1063 XXXXXXXXXXXXXXXXXXXXXFGLNNT-PVNSSPSFGLNSTPSFGSNSTPSFGLNNSQSF 1239
FG T +S+P+FG +S+P+FG++STPSF +S +F
Sbjct: 363 --------------------VFGTEGTFGASSTPAFGTSSSPAFGASSTPSFSFGSSPTF 402
Query: 1240 G-STNAXXXXXXXXXXXXXXXXXXXXXXXMPSFGISTSSAPSTVGSTSG 1383
G ST A P+FG STS S G G
Sbjct: 403 GQSTPAFGSSPFGTTAFGAQSSPFGSQSSTPAFG-STSFGQSPFGGQRG 450
Score = 105 bits (263), Expect = 5e-20
Identities = 95/316 (30%), Positives = 129/316 (40%), Gaps = 35/316 (11%)
Frame = +1
Query: 556 SFGLSSSSAGPVSAPLF-SSTVQFGSNSIPXXXXXXXXXXXXXXXMTFASG---SVPALG 723
+FG S + G S P F SS FG +S+ F S S PA G
Sbjct: 84 AFGSSMPAFGSSSTPAFGSSASSFGGSSVFGQKPAFGFGSTTTQSSPFGSTTQQSQPAFG 143
Query: 724 SG---SSPTFGLGSLT-GANSTSTVMLGTSPTCGLGSSTGANNTSTVAFGVNSSQSLDST 891
SG SS FG + GA STS ++P G S+ TST +FG S+ + T
Sbjct: 144 SGIFGSSVPFGSSTPAFGATSTSAFGATSTPAFGATSAPAFGATSTPSFGATSAPAFGGT 203
Query: 892 STPPFGANNALTFGSGSVTSAGTNSSPA-------------------PSFGLSGTTATGS 1014
STP FG+ + FG+ S + G+ SPA +FG S T A G+
Sbjct: 204 STPAFGSMSTPAFGATSTPAFGSTGSPAFGSTGTAFGVSNAPVFGTGGTFGASSTPAFGT 263
Query: 1015 NSSLTFGTGSAQXXXXXXXXXXXXXXXXXXXXXXXXXFGLNNTPV---NSSPSFGLNSTP 1185
+S+ FG S FG +TP S+P+FG STP
Sbjct: 264 SSTPAFGGSSTPAFGASSSPSFSFGSAFGQSTPAFGSFGATSTPAFGSTSTPAFGATSTP 323
Query: 1186 SFGSNSTPSFGLNNSQSFGSTNAXXXXXXXXXXXXXXXXXXXXXXXM-----PSFGISTS 1350
+FGS S P+FG ++ +FGST + P+FG TS
Sbjct: 324 AFGSTSIPAFGATSTPAFGSTGSPAFGSSGTAFGMSNASVFGTEGTFGASSTPAFG--TS 381
Query: 1351 SAPSTVGSTSGSFVFG 1398
S+P+ S++ SF FG
Sbjct: 382 SSPAFGASSTPSFSFG 397
Score = 66.6 bits (161), Expect = 1e-07
Identities = 85/309 (27%), Positives = 112/309 (36%), Gaps = 26/309 (8%)
Frame = +1
Query: 553 GSFGLSSSSA-GPVSAPLF--SSTVQFGSNSIPXXXXXXXXXXXXXXXM----------- 690
GSFG +S+ A G S P F +ST FGS SIP
Sbjct: 299 GSFGATSTPAFGSTSTPAFGATSTPAFGSTSIPAFGATSTPAFGSTGSPAFGSSGTAFGM 358
Query: 691 ----------TFASGSVPALGSGSSPTFGLGSLTGANSTSTVMLGTSPTCGLGS-STGAN 837
TF + S PA G+ SSP F GA+ST + G+SPT G + + G++
Sbjct: 359 SNASVFGTEGTFGASSTPAFGTSSSPAF------GASSTPSFSFGSSPTFGQSTPAFGSS 412
Query: 838 NTSTVAFGVNSSQSLDSTSTPPFGANNALTFGSGSVTSAGTNSSPAPSFGLSGTTATGSN 1017
T AFG SS +STP FG+ +FG S AP S TT
Sbjct: 413 PFGTTAFGAQSSPFGSQSSTPAFGST---SFGQSPFGGQRGGSRVAP---YSSTTEADGG 466
Query: 1018 SSLTFGTGSAQXXXXXXXXXXXXXXXXXXXXXXXXXFGLNNTP-VNSSPSFGLNSTPSFG 1194
S GT A G P S PS G+ FG
Sbjct: 467 S----GTQPAGKLESISAMPVYKDKSHEELRWEDYQLGDKGGPNPASQPSAGI----GFG 518
Query: 1195 SNSTPSFGLNNSQSFGSTNAXXXXXXXXXXXXXXXXXXXXXXXMPSFGISTSSAPSTVGS 1374
+++PS + S +FG T+A S G +TS+ S
Sbjct: 519 VSTSPSNPFSTSSTFGQTSA------NPFSSTSTNPFSLKPPSFNSIGFTTSATTSNPFQ 572
Query: 1375 TSGSFVFGQ 1401
++ S +FGQ
Sbjct: 573 STSSSLFGQ 581
>KJB39546.1 hypothetical protein B456_007G018500 [Gossypium raimondii]
Length = 754
Score = 110 bits (274), Expect = 2e-21
Identities = 100/316 (31%), Positives = 134/316 (42%), Gaps = 40/316 (12%)
Frame = +1
Query: 553 GSFGLSSSSAGPVSAPLFSSTVQFGSNSIPXXXXXXXXXXXXXXXMTFASGSVPALGS-- 726
G FG + SS+ FSST FG++S P F S S PA GS
Sbjct: 60 GVFGSAQSSSP------FSSTTAFGASSSPAFGSSMP---------AFGSSSTPAFGSSA 104
Query: 727 ---------GSSPTFGLGSLTGANST------------------STVMLGTS-PTCGLGS 822
G P FG GS T +S S+V G+S P G S
Sbjct: 105 SSFGGSSVFGQKPAFGFGSTTTQSSPFGSTTQQSQPAFGSGIFGSSVPFGSSTPAFGATS 164
Query: 823 STGANNTSTVAFGVNSSQSLDSTSTPPFGANNALTFGSGSVTSAGTNSSPAPSFGLSGTT 1002
++ TST AFG S+ + +TSTP FGA +A FG S + G+ S+PA FG + T
Sbjct: 165 TSAFGATSTPAFGATSAPAFGATSTPSFGATSAPAFGGTSTPAFGSMSTPA--FGATSTP 222
Query: 1003 ATGSNSSLTFG-TGSAQXXXXXXXXXXXXXXXXXXXXXXXXXFGLNNTPV---------N 1152
A GS S FG TG+A FG++N PV +
Sbjct: 223 AFGSTGSPAFGSTGTA--------------------------FGVSNAPVFGTGGTFGAS 256
Query: 1153 SSPSFGLNSTPSFGSNSTPSFGLNNSQSFGSTNAXXXXXXXXXXXXXXXXXXXXXXXMPS 1332
S+P+FG +STP+FG +STP+FG ++S SF +A P+
Sbjct: 257 STPAFGTSSTPAFGGSSTPAFGASSSPSFSFGSAFGQSTPAFGSFGATSTPAFGSTSTPA 316
Query: 1333 FGISTSSAPSTVGSTS 1380
FG +++ A GSTS
Sbjct: 317 FGATSTPA---FGSTS 329
Score = 108 bits (271), Expect = 5e-21
Identities = 93/289 (32%), Positives = 128/289 (44%), Gaps = 9/289 (3%)
Frame = +1
Query: 544 NVPGSFGLSSSSAGPVSAPLF--SSTVQFGSNSIPXXXXXXXXXXXXXXXM-----TFAS 702
+ P G S+ + G +S P F +ST FGS P + TF +
Sbjct: 196 SAPAFGGTSTPAFGSMSTPAFGATSTPAFGSTGSPAFGSTGTAFGVSNAPVFGTGGTFGA 255
Query: 703 GSVPALGSGSSPTFGLGSLTGANSTSTVMLGTSPTCGLGSSTGANNTSTVAFGVNSSQSL 882
S PA G+ S+P FG GS T A S+ SP+ GS+ G + + +FG S+ +
Sbjct: 256 SSTPAFGTSSTPAFG-GSSTPAFGASS-----SPSFSFGSAFGQSTPAFGSFGATSTPAF 309
Query: 883 DSTSTPPFGANNALTFGSGSVTSAGTNSSPAPSFGLSGTTATGSNSSLTFGTGSAQXXXX 1062
STSTP FGA + FGS S+ + G S+PA FG +G+ A GS S FG +A
Sbjct: 310 GSTSTPAFGATSTPAFGSTSIPAFGATSTPA--FGSTGSPAFGS-SGTAFGMSNAS---- 362
Query: 1063 XXXXXXXXXXXXXXXXXXXXXFGLNNT-PVNSSPSFGLNSTPSFGSNSTPSFGLNNSQSF 1239
FG T +S+P+FG +S+P+FG++STPSF +S +F
Sbjct: 363 --------------------VFGTEGTFGASSTPAFGTSSSPAFGASSTPSFSFGSSPTF 402
Query: 1240 G-STNAXXXXXXXXXXXXXXXXXXXXXXXMPSFGISTSSAPSTVGSTSG 1383
G ST A P+FG STS S G G
Sbjct: 403 GQSTPAFGSSPFGTTAFGAQSSPFGSQSSTPAFG-STSFGQSPFGGQRG 450
Score = 105 bits (263), Expect = 5e-20
Identities = 95/316 (30%), Positives = 129/316 (40%), Gaps = 35/316 (11%)
Frame = +1
Query: 556 SFGLSSSSAGPVSAPLF-SSTVQFGSNSIPXXXXXXXXXXXXXXXMTFASG---SVPALG 723
+FG S + G S P F SS FG +S+ F S S PA G
Sbjct: 84 AFGSSMPAFGSSSTPAFGSSASSFGGSSVFGQKPAFGFGSTTTQSSPFGSTTQQSQPAFG 143
Query: 724 SG---SSPTFGLGSLT-GANSTSTVMLGTSPTCGLGSSTGANNTSTVAFGVNSSQSLDST 891
SG SS FG + GA STS ++P G S+ TST +FG S+ + T
Sbjct: 144 SGIFGSSVPFGSSTPAFGATSTSAFGATSTPAFGATSAPAFGATSTPSFGATSAPAFGGT 203
Query: 892 STPPFGANNALTFGSGSVTSAGTNSSPA-------------------PSFGLSGTTATGS 1014
STP FG+ + FG+ S + G+ SPA +FG S T A G+
Sbjct: 204 STPAFGSMSTPAFGATSTPAFGSTGSPAFGSTGTAFGVSNAPVFGTGGTFGASSTPAFGT 263
Query: 1015 NSSLTFGTGSAQXXXXXXXXXXXXXXXXXXXXXXXXXFGLNNTPV---NSSPSFGLNSTP 1185
+S+ FG S FG +TP S+P+FG STP
Sbjct: 264 SSTPAFGGSSTPAFGASSSPSFSFGSAFGQSTPAFGSFGATSTPAFGSTSTPAFGATSTP 323
Query: 1186 SFGSNSTPSFGLNNSQSFGSTNAXXXXXXXXXXXXXXXXXXXXXXXM-----PSFGISTS 1350
+FGS S P+FG ++ +FGST + P+FG TS
Sbjct: 324 AFGSTSIPAFGATSTPAFGSTGSPAFGSSGTAFGMSNASVFGTEGTFGASSTPAFG--TS 381
Query: 1351 SAPSTVGSTSGSFVFG 1398
S+P+ S++ SF FG
Sbjct: 382 SSPAFGASSTPSFSFG 397
Score = 66.6 bits (161), Expect = 1e-07
Identities = 85/309 (27%), Positives = 112/309 (36%), Gaps = 26/309 (8%)
Frame = +1
Query: 553 GSFGLSSSSA-GPVSAPLF--SSTVQFGSNSIPXXXXXXXXXXXXXXXM----------- 690
GSFG +S+ A G S P F +ST FGS SIP
Sbjct: 299 GSFGATSTPAFGSTSTPAFGATSTPAFGSTSIPAFGATSTPAFGSTGSPAFGSSGTAFGM 358
Query: 691 ----------TFASGSVPALGSGSSPTFGLGSLTGANSTSTVMLGTSPTCGLGS-STGAN 837
TF + S PA G+ SSP F GA+ST + G+SPT G + + G++
Sbjct: 359 SNASVFGTEGTFGASSTPAFGTSSSPAF------GASSTPSFSFGSSPTFGQSTPAFGSS 412
Query: 838 NTSTVAFGVNSSQSLDSTSTPPFGANNALTFGSGSVTSAGTNSSPAPSFGLSGTTATGSN 1017
T AFG SS +STP FG+ +FG S AP S TT
Sbjct: 413 PFGTTAFGAQSSPFGSQSSTPAFGST---SFGQSPFGGQRGGSRVAP---YSSTTEADGG 466
Query: 1018 SSLTFGTGSAQXXXXXXXXXXXXXXXXXXXXXXXXXFGLNNTP-VNSSPSFGLNSTPSFG 1194
S GT A G P S PS G+ FG
Sbjct: 467 S----GTQPAGKLESISAMPVYKDKSHEELRWEDYQLGDKGGPNPASQPSAGI----GFG 518
Query: 1195 SNSTPSFGLNNSQSFGSTNAXXXXXXXXXXXXXXXXXXXXXXXMPSFGISTSSAPSTVGS 1374
+++PS + S +FG T+A S G +TS+ S
Sbjct: 519 VSTSPSNPFSTSSTFGQTSA------NPFSSTSTNPFSLKPPSFNSIGFTTSATTSNPFQ 572
Query: 1375 TSGSFVFGQ 1401
++ S +FGQ
Sbjct: 573 STSSSLFGQ 581
>KJB39543.1 hypothetical protein B456_007G018500 [Gossypium raimondii]
Length = 1111
Score = 110 bits (274), Expect = 3e-21
Identities = 100/316 (31%), Positives = 134/316 (42%), Gaps = 40/316 (12%)
Frame = +1
Query: 553 GSFGLSSSSAGPVSAPLFSSTVQFGSNSIPXXXXXXXXXXXXXXXMTFASGSVPALGS-- 726
G FG + SS+ FSST FG++S P F S S PA GS
Sbjct: 60 GVFGSAQSSSP------FSSTTAFGASSSPAFGSSMP---------AFGSSSTPAFGSSA 104
Query: 727 ---------GSSPTFGLGSLTGANST------------------STVMLGTS-PTCGLGS 822
G P FG GS T +S S+V G+S P G S
Sbjct: 105 SSFGGSSVFGQKPAFGFGSTTTQSSPFGSTTQQSQPAFGSGIFGSSVPFGSSTPAFGATS 164
Query: 823 STGANNTSTVAFGVNSSQSLDSTSTPPFGANNALTFGSGSVTSAGTNSSPAPSFGLSGTT 1002
++ TST AFG S+ + +TSTP FGA +A FG S + G+ S+PA FG + T
Sbjct: 165 TSAFGATSTPAFGATSAPAFGATSTPSFGATSAPAFGGTSTPAFGSMSTPA--FGATSTP 222
Query: 1003 ATGSNSSLTFG-TGSAQXXXXXXXXXXXXXXXXXXXXXXXXXFGLNNTPV---------N 1152
A GS S FG TG+A FG++N PV +
Sbjct: 223 AFGSTGSPAFGSTGTA--------------------------FGVSNAPVFGTGGTFGAS 256
Query: 1153 SSPSFGLNSTPSFGSNSTPSFGLNNSQSFGSTNAXXXXXXXXXXXXXXXXXXXXXXXMPS 1332
S+P+FG +STP+FG +STP+FG ++S SF +A P+
Sbjct: 257 STPAFGTSSTPAFGGSSTPAFGASSSPSFSFGSAFGQSTPAFGSFGATSTPAFGSTSTPA 316
Query: 1333 FGISTSSAPSTVGSTS 1380
FG +++ A GSTS
Sbjct: 317 FGATSTPA---FGSTS 329
Score = 108 bits (271), Expect = 7e-21
Identities = 93/289 (32%), Positives = 128/289 (44%), Gaps = 9/289 (3%)
Frame = +1
Query: 544 NVPGSFGLSSSSAGPVSAPLF--SSTVQFGSNSIPXXXXXXXXXXXXXXXM-----TFAS 702
+ P G S+ + G +S P F +ST FGS P + TF +
Sbjct: 196 SAPAFGGTSTPAFGSMSTPAFGATSTPAFGSTGSPAFGSTGTAFGVSNAPVFGTGGTFGA 255
Query: 703 GSVPALGSGSSPTFGLGSLTGANSTSTVMLGTSPTCGLGSSTGANNTSTVAFGVNSSQSL 882
S PA G+ S+P FG GS T A S+ SP+ GS+ G + + +FG S+ +
Sbjct: 256 SSTPAFGTSSTPAFG-GSSTPAFGASS-----SPSFSFGSAFGQSTPAFGSFGATSTPAF 309
Query: 883 DSTSTPPFGANNALTFGSGSVTSAGTNSSPAPSFGLSGTTATGSNSSLTFGTGSAQXXXX 1062
STSTP FGA + FGS S+ + G S+PA FG +G+ A GS S FG +A
Sbjct: 310 GSTSTPAFGATSTPAFGSTSIPAFGATSTPA--FGSTGSPAFGS-SGTAFGMSNAS---- 362
Query: 1063 XXXXXXXXXXXXXXXXXXXXXFGLNNT-PVNSSPSFGLNSTPSFGSNSTPSFGLNNSQSF 1239
FG T +S+P+FG +S+P+FG++STPSF +S +F
Sbjct: 363 --------------------VFGTEGTFGASSTPAFGTSSSPAFGASSTPSFSFGSSPTF 402
Query: 1240 G-STNAXXXXXXXXXXXXXXXXXXXXXXXMPSFGISTSSAPSTVGSTSG 1383
G ST A P+FG STS S G G
Sbjct: 403 GQSTPAFGSSPFGTTAFGAQSSPFGSQSSTPAFG-STSFGQSPFGGQRG 450
Score = 105 bits (263), Expect = 7e-20
Identities = 95/316 (30%), Positives = 129/316 (40%), Gaps = 35/316 (11%)
Frame = +1
Query: 556 SFGLSSSSAGPVSAPLF-SSTVQFGSNSIPXXXXXXXXXXXXXXXMTFASG---SVPALG 723
+FG S + G S P F SS FG +S+ F S S PA G
Sbjct: 84 AFGSSMPAFGSSSTPAFGSSASSFGGSSVFGQKPAFGFGSTTTQSSPFGSTTQQSQPAFG 143
Query: 724 SG---SSPTFGLGSLT-GANSTSTVMLGTSPTCGLGSSTGANNTSTVAFGVNSSQSLDST 891
SG SS FG + GA STS ++P G S+ TST +FG S+ + T
Sbjct: 144 SGIFGSSVPFGSSTPAFGATSTSAFGATSTPAFGATSAPAFGATSTPSFGATSAPAFGGT 203
Query: 892 STPPFGANNALTFGSGSVTSAGTNSSPA-------------------PSFGLSGTTATGS 1014
STP FG+ + FG+ S + G+ SPA +FG S T A G+
Sbjct: 204 STPAFGSMSTPAFGATSTPAFGSTGSPAFGSTGTAFGVSNAPVFGTGGTFGASSTPAFGT 263
Query: 1015 NSSLTFGTGSAQXXXXXXXXXXXXXXXXXXXXXXXXXFGLNNTPV---NSSPSFGLNSTP 1185
+S+ FG S FG +TP S+P+FG STP
Sbjct: 264 SSTPAFGGSSTPAFGASSSPSFSFGSAFGQSTPAFGSFGATSTPAFGSTSTPAFGATSTP 323
Query: 1186 SFGSNSTPSFGLNNSQSFGSTNAXXXXXXXXXXXXXXXXXXXXXXXM-----PSFGISTS 1350
+FGS S P+FG ++ +FGST + P+FG TS
Sbjct: 324 AFGSTSIPAFGATSTPAFGSTGSPAFGSSGTAFGMSNASVFGTEGTFGASSTPAFG--TS 381
Query: 1351 SAPSTVGSTSGSFVFG 1398
S+P+ S++ SF FG
Sbjct: 382 SSPAFGASSTPSFSFG 397
Score = 62.4 bits (150), Expect = 2e-06
Identities = 75/260 (28%), Positives = 97/260 (37%), Gaps = 26/260 (10%)
Frame = +1
Query: 553 GSFGLSSSSA-GPVSAPLF--SSTVQFGSNSIPXXXXXXXXXXXXXXXM----------- 690
GSFG +S+ A G S P F +ST FGS SIP
Sbjct: 299 GSFGATSTPAFGSTSTPAFGATSTPAFGSTSIPAFGATSTPAFGSTGSPAFGSSGTAFGM 358
Query: 691 ----------TFASGSVPALGSGSSPTFGLGSLTGANSTSTVMLGTSPTCGLGS-STGAN 837
TF + S PA G+ SSP F GA+ST + G+SPT G + + G++
Sbjct: 359 SNASVFGTEGTFGASSTPAFGTSSSPAF------GASSTPSFSFGSSPTFGQSTPAFGSS 412
Query: 838 NTSTVAFGVNSSQSLDSTSTPPFGANNALTFGSGSVTSAGTNSSPAPSFGLSGTTATGSN 1017
T AFG SS +STP FG+ +FG S AP S TT
Sbjct: 413 PFGTTAFGAQSSPFGSQSSTPAFGST---SFGQSPFGGQRGGSRVAP---YSSTTEADGG 466
Query: 1018 SSLTFGTGSAQXXXXXXXXXXXXXXXXXXXXXXXXXFGLNNTP-VNSSPSFGLNSTPSFG 1194
S GT A G P S PS G+ FG
Sbjct: 467 S----GTQPAGKLESISAMPVYKDKSHEELRWEDYQLGDKGGPNPASQPSAGI----GFG 518
Query: 1195 SNSTPSFGLNNSQSFGSTNA 1254
+++PS + S +FG T +
Sbjct: 519 VSTSPSNPFSTSSTFGFTTS 538
>XP_012488655.1 PREDICTED: nuclear pore complex protein NUP98A-like isoform X6
[Gossypium raimondii]
Length = 1119
Score = 110 bits (274), Expect = 3e-21
Identities = 100/316 (31%), Positives = 134/316 (42%), Gaps = 40/316 (12%)
Frame = +1
Query: 553 GSFGLSSSSAGPVSAPLFSSTVQFGSNSIPXXXXXXXXXXXXXXXMTFASGSVPALGS-- 726
G FG + SS+ FSST FG++S P F S S PA GS
Sbjct: 60 GVFGSAQSSSP------FSSTTAFGASSSPAFGSSMP---------AFGSSSTPAFGSSA 104
Query: 727 ---------GSSPTFGLGSLTGANST------------------STVMLGTS-PTCGLGS 822
G P FG GS T +S S+V G+S P G S
Sbjct: 105 SSFGGSSVFGQKPAFGFGSTTTQSSPFGSTTQQSQPAFGSGIFGSSVPFGSSTPAFGATS 164
Query: 823 STGANNTSTVAFGVNSSQSLDSTSTPPFGANNALTFGSGSVTSAGTNSSPAPSFGLSGTT 1002
++ TST AFG S+ + +TSTP FGA +A FG S + G+ S+PA FG + T
Sbjct: 165 TSAFGATSTPAFGATSAPAFGATSTPSFGATSAPAFGGTSTPAFGSMSTPA--FGATSTP 222
Query: 1003 ATGSNSSLTFG-TGSAQXXXXXXXXXXXXXXXXXXXXXXXXXFGLNNTPV---------N 1152
A GS S FG TG+A FG++N PV +
Sbjct: 223 AFGSTGSPAFGSTGTA--------------------------FGVSNAPVFGTGGTFGAS 256
Query: 1153 SSPSFGLNSTPSFGSNSTPSFGLNNSQSFGSTNAXXXXXXXXXXXXXXXXXXXXXXXMPS 1332
S+P+FG +STP+FG +STP+FG ++S SF +A P+
Sbjct: 257 STPAFGTSSTPAFGGSSTPAFGASSSPSFSFGSAFGQSTPAFGSFGATSTPAFGSTSTPA 316
Query: 1333 FGISTSSAPSTVGSTS 1380
FG +++ A GSTS
Sbjct: 317 FGATSTPA---FGSTS 329
Score = 108 bits (271), Expect = 7e-21
Identities = 93/289 (32%), Positives = 128/289 (44%), Gaps = 9/289 (3%)
Frame = +1
Query: 544 NVPGSFGLSSSSAGPVSAPLF--SSTVQFGSNSIPXXXXXXXXXXXXXXXM-----TFAS 702
+ P G S+ + G +S P F +ST FGS P + TF +
Sbjct: 196 SAPAFGGTSTPAFGSMSTPAFGATSTPAFGSTGSPAFGSTGTAFGVSNAPVFGTGGTFGA 255
Query: 703 GSVPALGSGSSPTFGLGSLTGANSTSTVMLGTSPTCGLGSSTGANNTSTVAFGVNSSQSL 882
S PA G+ S+P FG GS T A S+ SP+ GS+ G + + +FG S+ +
Sbjct: 256 SSTPAFGTSSTPAFG-GSSTPAFGASS-----SPSFSFGSAFGQSTPAFGSFGATSTPAF 309
Query: 883 DSTSTPPFGANNALTFGSGSVTSAGTNSSPAPSFGLSGTTATGSNSSLTFGTGSAQXXXX 1062
STSTP FGA + FGS S+ + G S+PA FG +G+ A GS S FG +A
Sbjct: 310 GSTSTPAFGATSTPAFGSTSIPAFGATSTPA--FGSTGSPAFGS-SGTAFGMSNAS---- 362
Query: 1063 XXXXXXXXXXXXXXXXXXXXXFGLNNT-PVNSSPSFGLNSTPSFGSNSTPSFGLNNSQSF 1239
FG T +S+P+FG +S+P+FG++STPSF +S +F
Sbjct: 363 --------------------VFGTEGTFGASSTPAFGTSSSPAFGASSTPSFSFGSSPTF 402
Query: 1240 G-STNAXXXXXXXXXXXXXXXXXXXXXXXMPSFGISTSSAPSTVGSTSG 1383
G ST A P+FG STS S G G
Sbjct: 403 GQSTPAFGSSPFGTTAFGAQSSPFGSQSSTPAFG-STSFGQSPFGGQRG 450
Score = 105 bits (263), Expect = 7e-20
Identities = 95/316 (30%), Positives = 129/316 (40%), Gaps = 35/316 (11%)
Frame = +1
Query: 556 SFGLSSSSAGPVSAPLF-SSTVQFGSNSIPXXXXXXXXXXXXXXXMTFASG---SVPALG 723
+FG S + G S P F SS FG +S+ F S S PA G
Sbjct: 84 AFGSSMPAFGSSSTPAFGSSASSFGGSSVFGQKPAFGFGSTTTQSSPFGSTTQQSQPAFG 143
Query: 724 SG---SSPTFGLGSLT-GANSTSTVMLGTSPTCGLGSSTGANNTSTVAFGVNSSQSLDST 891
SG SS FG + GA STS ++P G S+ TST +FG S+ + T
Sbjct: 144 SGIFGSSVPFGSSTPAFGATSTSAFGATSTPAFGATSAPAFGATSTPSFGATSAPAFGGT 203
Query: 892 STPPFGANNALTFGSGSVTSAGTNSSPA-------------------PSFGLSGTTATGS 1014
STP FG+ + FG+ S + G+ SPA +FG S T A G+
Sbjct: 204 STPAFGSMSTPAFGATSTPAFGSTGSPAFGSTGTAFGVSNAPVFGTGGTFGASSTPAFGT 263
Query: 1015 NSSLTFGTGSAQXXXXXXXXXXXXXXXXXXXXXXXXXFGLNNTPV---NSSPSFGLNSTP 1185
+S+ FG S FG +TP S+P+FG STP
Sbjct: 264 SSTPAFGGSSTPAFGASSSPSFSFGSAFGQSTPAFGSFGATSTPAFGSTSTPAFGATSTP 323
Query: 1186 SFGSNSTPSFGLNNSQSFGSTNAXXXXXXXXXXXXXXXXXXXXXXXM-----PSFGISTS 1350
+FGS S P+FG ++ +FGST + P+FG TS
Sbjct: 324 AFGSTSIPAFGATSTPAFGSTGSPAFGSSGTAFGMSNASVFGTEGTFGASSTPAFG--TS 381
Query: 1351 SAPSTVGSTSGSFVFG 1398
S+P+ S++ SF FG
Sbjct: 382 SSPAFGASSTPSFSFG 397
Score = 62.4 bits (150), Expect = 2e-06
Identities = 75/260 (28%), Positives = 97/260 (37%), Gaps = 26/260 (10%)
Frame = +1
Query: 553 GSFGLSSSSA-GPVSAPLF--SSTVQFGSNSIPXXXXXXXXXXXXXXXM----------- 690
GSFG +S+ A G S P F +ST FGS SIP
Sbjct: 299 GSFGATSTPAFGSTSTPAFGATSTPAFGSTSIPAFGATSTPAFGSTGSPAFGSSGTAFGM 358
Query: 691 ----------TFASGSVPALGSGSSPTFGLGSLTGANSTSTVMLGTSPTCGLGS-STGAN 837
TF + S PA G+ SSP F GA+ST + G+SPT G + + G++
Sbjct: 359 SNASVFGTEGTFGASSTPAFGTSSSPAF------GASSTPSFSFGSSPTFGQSTPAFGSS 412
Query: 838 NTSTVAFGVNSSQSLDSTSTPPFGANNALTFGSGSVTSAGTNSSPAPSFGLSGTTATGSN 1017
T AFG SS +STP FG+ +FG S AP S TT
Sbjct: 413 PFGTTAFGAQSSPFGSQSSTPAFGST---SFGQSPFGGQRGGSRVAP---YSSTTEADGG 466
Query: 1018 SSLTFGTGSAQXXXXXXXXXXXXXXXXXXXXXXXXXFGLNNTP-VNSSPSFGLNSTPSFG 1194
S GT A G P S PS G+ FG
Sbjct: 467 S----GTQPAGKLESISAMPVYKDKSHEELRWEDYQLGDKGGPNPASQPSAGI----GFG 518
Query: 1195 SNSTPSFGLNNSQSFGSTNA 1254
+++PS + S +FG T +
Sbjct: 519 VSTSPSNPFSTSSTFGFTTS 538
>KJB39542.1 hypothetical protein B456_007G018500 [Gossypium raimondii]
Length = 1123
Score = 110 bits (274), Expect = 3e-21
Identities = 100/316 (31%), Positives = 134/316 (42%), Gaps = 40/316 (12%)
Frame = +1
Query: 553 GSFGLSSSSAGPVSAPLFSSTVQFGSNSIPXXXXXXXXXXXXXXXMTFASGSVPALGS-- 726
G FG + SS+ FSST FG++S P F S S PA GS
Sbjct: 60 GVFGSAQSSSP------FSSTTAFGASSSPAFGSSMP---------AFGSSSTPAFGSSA 104
Query: 727 ---------GSSPTFGLGSLTGANST------------------STVMLGTS-PTCGLGS 822
G P FG GS T +S S+V G+S P G S
Sbjct: 105 SSFGGSSVFGQKPAFGFGSTTTQSSPFGSTTQQSQPAFGSGIFGSSVPFGSSTPAFGATS 164
Query: 823 STGANNTSTVAFGVNSSQSLDSTSTPPFGANNALTFGSGSVTSAGTNSSPAPSFGLSGTT 1002
++ TST AFG S+ + +TSTP FGA +A FG S + G+ S+PA FG + T
Sbjct: 165 TSAFGATSTPAFGATSAPAFGATSTPSFGATSAPAFGGTSTPAFGSMSTPA--FGATSTP 222
Query: 1003 ATGSNSSLTFG-TGSAQXXXXXXXXXXXXXXXXXXXXXXXXXFGLNNTPV---------N 1152
A GS S FG TG+A FG++N PV +
Sbjct: 223 AFGSTGSPAFGSTGTA--------------------------FGVSNAPVFGTGGTFGAS 256
Query: 1153 SSPSFGLNSTPSFGSNSTPSFGLNNSQSFGSTNAXXXXXXXXXXXXXXXXXXXXXXXMPS 1332
S+P+FG +STP+FG +STP+FG ++S SF +A P+
Sbjct: 257 STPAFGTSSTPAFGGSSTPAFGASSSPSFSFGSAFGQSTPAFGSFGATSTPAFGSTSTPA 316
Query: 1333 FGISTSSAPSTVGSTS 1380
FG +++ A GSTS
Sbjct: 317 FGATSTPA---FGSTS 329
Score = 108 bits (271), Expect = 7e-21
Identities = 93/289 (32%), Positives = 128/289 (44%), Gaps = 9/289 (3%)
Frame = +1
Query: 544 NVPGSFGLSSSSAGPVSAPLF--SSTVQFGSNSIPXXXXXXXXXXXXXXXM-----TFAS 702
+ P G S+ + G +S P F +ST FGS P + TF +
Sbjct: 196 SAPAFGGTSTPAFGSMSTPAFGATSTPAFGSTGSPAFGSTGTAFGVSNAPVFGTGGTFGA 255
Query: 703 GSVPALGSGSSPTFGLGSLTGANSTSTVMLGTSPTCGLGSSTGANNTSTVAFGVNSSQSL 882
S PA G+ S+P FG GS T A S+ SP+ GS+ G + + +FG S+ +
Sbjct: 256 SSTPAFGTSSTPAFG-GSSTPAFGASS-----SPSFSFGSAFGQSTPAFGSFGATSTPAF 309
Query: 883 DSTSTPPFGANNALTFGSGSVTSAGTNSSPAPSFGLSGTTATGSNSSLTFGTGSAQXXXX 1062
STSTP FGA + FGS S+ + G S+PA FG +G+ A GS S FG +A
Sbjct: 310 GSTSTPAFGATSTPAFGSTSIPAFGATSTPA--FGSTGSPAFGS-SGTAFGMSNAS---- 362
Query: 1063 XXXXXXXXXXXXXXXXXXXXXFGLNNT-PVNSSPSFGLNSTPSFGSNSTPSFGLNNSQSF 1239
FG T +S+P+FG +S+P+FG++STPSF +S +F
Sbjct: 363 --------------------VFGTEGTFGASSTPAFGTSSSPAFGASSTPSFSFGSSPTF 402
Query: 1240 G-STNAXXXXXXXXXXXXXXXXXXXXXXXMPSFGISTSSAPSTVGSTSG 1383
G ST A P+FG STS S G G
Sbjct: 403 GQSTPAFGSSPFGTTAFGAQSSPFGSQSSTPAFG-STSFGQSPFGGQRG 450
Score = 105 bits (263), Expect = 7e-20
Identities = 95/316 (30%), Positives = 129/316 (40%), Gaps = 35/316 (11%)
Frame = +1
Query: 556 SFGLSSSSAGPVSAPLF-SSTVQFGSNSIPXXXXXXXXXXXXXXXMTFASG---SVPALG 723
+FG S + G S P F SS FG +S+ F S S PA G
Sbjct: 84 AFGSSMPAFGSSSTPAFGSSASSFGGSSVFGQKPAFGFGSTTTQSSPFGSTTQQSQPAFG 143
Query: 724 SG---SSPTFGLGSLT-GANSTSTVMLGTSPTCGLGSSTGANNTSTVAFGVNSSQSLDST 891
SG SS FG + GA STS ++P G S+ TST +FG S+ + T
Sbjct: 144 SGIFGSSVPFGSSTPAFGATSTSAFGATSTPAFGATSAPAFGATSTPSFGATSAPAFGGT 203
Query: 892 STPPFGANNALTFGSGSVTSAGTNSSPA-------------------PSFGLSGTTATGS 1014
STP FG+ + FG+ S + G+ SPA +FG S T A G+
Sbjct: 204 STPAFGSMSTPAFGATSTPAFGSTGSPAFGSTGTAFGVSNAPVFGTGGTFGASSTPAFGT 263
Query: 1015 NSSLTFGTGSAQXXXXXXXXXXXXXXXXXXXXXXXXXFGLNNTPV---NSSPSFGLNSTP 1185
+S+ FG S FG +TP S+P+FG STP
Sbjct: 264 SSTPAFGGSSTPAFGASSSPSFSFGSAFGQSTPAFGSFGATSTPAFGSTSTPAFGATSTP 323
Query: 1186 SFGSNSTPSFGLNNSQSFGSTNAXXXXXXXXXXXXXXXXXXXXXXXM-----PSFGISTS 1350
+FGS S P+FG ++ +FGST + P+FG TS
Sbjct: 324 AFGSTSIPAFGATSTPAFGSTGSPAFGSSGTAFGMSNASVFGTEGTFGASSTPAFG--TS 381
Query: 1351 SAPSTVGSTSGSFVFG 1398
S+P+ S++ SF FG
Sbjct: 382 SSPAFGASSTPSFSFG 397
Score = 66.6 bits (161), Expect = 1e-07
Identities = 85/309 (27%), Positives = 112/309 (36%), Gaps = 26/309 (8%)
Frame = +1
Query: 553 GSFGLSSSSA-GPVSAPLF--SSTVQFGSNSIPXXXXXXXXXXXXXXXM----------- 690
GSFG +S+ A G S P F +ST FGS SIP
Sbjct: 299 GSFGATSTPAFGSTSTPAFGATSTPAFGSTSIPAFGATSTPAFGSTGSPAFGSSGTAFGM 358
Query: 691 ----------TFASGSVPALGSGSSPTFGLGSLTGANSTSTVMLGTSPTCGLGS-STGAN 837
TF + S PA G+ SSP F GA+ST + G+SPT G + + G++
Sbjct: 359 SNASVFGTEGTFGASSTPAFGTSSSPAF------GASSTPSFSFGSSPTFGQSTPAFGSS 412
Query: 838 NTSTVAFGVNSSQSLDSTSTPPFGANNALTFGSGSVTSAGTNSSPAPSFGLSGTTATGSN 1017
T AFG SS +STP FG+ +FG S AP S TT
Sbjct: 413 PFGTTAFGAQSSPFGSQSSTPAFGST---SFGQSPFGGQRGGSRVAP---YSSTTEADGG 466
Query: 1018 SSLTFGTGSAQXXXXXXXXXXXXXXXXXXXXXXXXXFGLNNTP-VNSSPSFGLNSTPSFG 1194
S GT A G P S PS G+ FG
Sbjct: 467 S----GTQPAGKLESISAMPVYKDKSHEELRWEDYQLGDKGGPNPASQPSAGI----GFG 518
Query: 1195 SNSTPSFGLNNSQSFGSTNAXXXXXXXXXXXXXXXXXXXXXXXMPSFGISTSSAPSTVGS 1374
+++PS + S +FG T+A S G +TS+ S
Sbjct: 519 VSTSPSNPFSTSSTFGQTSA------NPFSSTSTNPFSLKPPSFNSIGFTTSATTSNPFQ 572
Query: 1375 TSGSFVFGQ 1401
++ S +FGQ
Sbjct: 573 STSSSLFGQ 581
>KJB39538.1 hypothetical protein B456_007G018500 [Gossypium raimondii]
Length = 1125
Score = 110 bits (274), Expect = 3e-21
Identities = 100/316 (31%), Positives = 134/316 (42%), Gaps = 40/316 (12%)
Frame = +1
Query: 553 GSFGLSSSSAGPVSAPLFSSTVQFGSNSIPXXXXXXXXXXXXXXXMTFASGSVPALGS-- 726
G FG + SS+ FSST FG++S P F S S PA GS
Sbjct: 60 GVFGSAQSSSP------FSSTTAFGASSSPAFGSSMP---------AFGSSSTPAFGSSA 104
Query: 727 ---------GSSPTFGLGSLTGANST------------------STVMLGTS-PTCGLGS 822
G P FG GS T +S S+V G+S P G S
Sbjct: 105 SSFGGSSVFGQKPAFGFGSTTTQSSPFGSTTQQSQPAFGSGIFGSSVPFGSSTPAFGATS 164
Query: 823 STGANNTSTVAFGVNSSQSLDSTSTPPFGANNALTFGSGSVTSAGTNSSPAPSFGLSGTT 1002
++ TST AFG S+ + +TSTP FGA +A FG S + G+ S+PA FG + T
Sbjct: 165 TSAFGATSTPAFGATSAPAFGATSTPSFGATSAPAFGGTSTPAFGSMSTPA--FGATSTP 222
Query: 1003 ATGSNSSLTFG-TGSAQXXXXXXXXXXXXXXXXXXXXXXXXXFGLNNTPV---------N 1152
A GS S FG TG+A FG++N PV +
Sbjct: 223 AFGSTGSPAFGSTGTA--------------------------FGVSNAPVFGTGGTFGAS 256
Query: 1153 SSPSFGLNSTPSFGSNSTPSFGLNNSQSFGSTNAXXXXXXXXXXXXXXXXXXXXXXXMPS 1332
S+P+FG +STP+FG +STP+FG ++S SF +A P+
Sbjct: 257 STPAFGTSSTPAFGGSSTPAFGASSSPSFSFGSAFGQSTPAFGSFGATSTPAFGSTSTPA 316
Query: 1333 FGISTSSAPSTVGSTS 1380
FG +++ A GSTS
Sbjct: 317 FGATSTPA---FGSTS 329
Score = 108 bits (271), Expect = 7e-21
Identities = 93/289 (32%), Positives = 128/289 (44%), Gaps = 9/289 (3%)
Frame = +1
Query: 544 NVPGSFGLSSSSAGPVSAPLF--SSTVQFGSNSIPXXXXXXXXXXXXXXXM-----TFAS 702
+ P G S+ + G +S P F +ST FGS P + TF +
Sbjct: 196 SAPAFGGTSTPAFGSMSTPAFGATSTPAFGSTGSPAFGSTGTAFGVSNAPVFGTGGTFGA 255
Query: 703 GSVPALGSGSSPTFGLGSLTGANSTSTVMLGTSPTCGLGSSTGANNTSTVAFGVNSSQSL 882
S PA G+ S+P FG GS T A S+ SP+ GS+ G + + +FG S+ +
Sbjct: 256 SSTPAFGTSSTPAFG-GSSTPAFGASS-----SPSFSFGSAFGQSTPAFGSFGATSTPAF 309
Query: 883 DSTSTPPFGANNALTFGSGSVTSAGTNSSPAPSFGLSGTTATGSNSSLTFGTGSAQXXXX 1062
STSTP FGA + FGS S+ + G S+PA FG +G+ A GS S FG +A
Sbjct: 310 GSTSTPAFGATSTPAFGSTSIPAFGATSTPA--FGSTGSPAFGS-SGTAFGMSNAS---- 362
Query: 1063 XXXXXXXXXXXXXXXXXXXXXFGLNNT-PVNSSPSFGLNSTPSFGSNSTPSFGLNNSQSF 1239
FG T +S+P+FG +S+P+FG++STPSF +S +F
Sbjct: 363 --------------------VFGTEGTFGASSTPAFGTSSSPAFGASSTPSFSFGSSPTF 402
Query: 1240 G-STNAXXXXXXXXXXXXXXXXXXXXXXXMPSFGISTSSAPSTVGSTSG 1383
G ST A P+FG STS S G G
Sbjct: 403 GQSTPAFGSSPFGTTAFGAQSSPFGSQSSTPAFG-STSFGQSPFGGQRG 450
Score = 105 bits (263), Expect = 7e-20
Identities = 95/316 (30%), Positives = 129/316 (40%), Gaps = 35/316 (11%)
Frame = +1
Query: 556 SFGLSSSSAGPVSAPLF-SSTVQFGSNSIPXXXXXXXXXXXXXXXMTFASG---SVPALG 723
+FG S + G S P F SS FG +S+ F S S PA G
Sbjct: 84 AFGSSMPAFGSSSTPAFGSSASSFGGSSVFGQKPAFGFGSTTTQSSPFGSTTQQSQPAFG 143
Query: 724 SG---SSPTFGLGSLT-GANSTSTVMLGTSPTCGLGSSTGANNTSTVAFGVNSSQSLDST 891
SG SS FG + GA STS ++P G S+ TST +FG S+ + T
Sbjct: 144 SGIFGSSVPFGSSTPAFGATSTSAFGATSTPAFGATSAPAFGATSTPSFGATSAPAFGGT 203
Query: 892 STPPFGANNALTFGSGSVTSAGTNSSPA-------------------PSFGLSGTTATGS 1014
STP FG+ + FG+ S + G+ SPA +FG S T A G+
Sbjct: 204 STPAFGSMSTPAFGATSTPAFGSTGSPAFGSTGTAFGVSNAPVFGTGGTFGASSTPAFGT 263
Query: 1015 NSSLTFGTGSAQXXXXXXXXXXXXXXXXXXXXXXXXXFGLNNTPV---NSSPSFGLNSTP 1185
+S+ FG S FG +TP S+P+FG STP
Sbjct: 264 SSTPAFGGSSTPAFGASSSPSFSFGSAFGQSTPAFGSFGATSTPAFGSTSTPAFGATSTP 323
Query: 1186 SFGSNSTPSFGLNNSQSFGSTNAXXXXXXXXXXXXXXXXXXXXXXXM-----PSFGISTS 1350
+FGS S P+FG ++ +FGST + P+FG TS
Sbjct: 324 AFGSTSIPAFGATSTPAFGSTGSPAFGSSGTAFGMSNASVFGTEGTFGASSTPAFG--TS 381
Query: 1351 SAPSTVGSTSGSFVFG 1398
S+P+ S++ SF FG
Sbjct: 382 SSPAFGASSTPSFSFG 397
Score = 66.6 bits (161), Expect = 1e-07
Identities = 85/309 (27%), Positives = 112/309 (36%), Gaps = 26/309 (8%)
Frame = +1
Query: 553 GSFGLSSSSA-GPVSAPLF--SSTVQFGSNSIPXXXXXXXXXXXXXXXM----------- 690
GSFG +S+ A G S P F +ST FGS SIP
Sbjct: 299 GSFGATSTPAFGSTSTPAFGATSTPAFGSTSIPAFGATSTPAFGSTGSPAFGSSGTAFGM 358
Query: 691 ----------TFASGSVPALGSGSSPTFGLGSLTGANSTSTVMLGTSPTCGLGS-STGAN 837
TF + S PA G+ SSP F GA+ST + G+SPT G + + G++
Sbjct: 359 SNASVFGTEGTFGASSTPAFGTSSSPAF------GASSTPSFSFGSSPTFGQSTPAFGSS 412
Query: 838 NTSTVAFGVNSSQSLDSTSTPPFGANNALTFGSGSVTSAGTNSSPAPSFGLSGTTATGSN 1017
T AFG SS +STP FG+ +FG S AP S TT
Sbjct: 413 PFGTTAFGAQSSPFGSQSSTPAFGST---SFGQSPFGGQRGGSRVAP---YSSTTEADGG 466
Query: 1018 SSLTFGTGSAQXXXXXXXXXXXXXXXXXXXXXXXXXFGLNNTP-VNSSPSFGLNSTPSFG 1194
S GT A G P S PS G+ FG
Sbjct: 467 S----GTQPAGKLESISAMPVYKDKSHEELRWEDYQLGDKGGPNPASQPSAGI----GFG 518
Query: 1195 SNSTPSFGLNNSQSFGSTNAXXXXXXXXXXXXXXXXXXXXXXXMPSFGISTSSAPSTVGS 1374
+++PS + S +FG T+A S G +TS+ S
Sbjct: 519 VSTSPSNPFSTSSTFGQTSA------NPFSSTSTNPFSLKPPSFNSIGFTTSATTSNPFQ 572
Query: 1375 TSGSFVFGQ 1401
++ S +FGQ
Sbjct: 573 STSSSLFGQ 581
>XP_012488653.1 PREDICTED: nuclear pore complex protein NUP98A-like isoform X4
[Gossypium raimondii] KJB39540.1 hypothetical protein
B456_007G018500 [Gossypium raimondii]
Length = 1137
Score = 110 bits (274), Expect = 3e-21
Identities = 100/316 (31%), Positives = 134/316 (42%), Gaps = 40/316 (12%)
Frame = +1
Query: 553 GSFGLSSSSAGPVSAPLFSSTVQFGSNSIPXXXXXXXXXXXXXXXMTFASGSVPALGS-- 726
G FG + SS+ FSST FG++S P F S S PA GS
Sbjct: 60 GVFGSAQSSSP------FSSTTAFGASSSPAFGSSMP---------AFGSSSTPAFGSSA 104
Query: 727 ---------GSSPTFGLGSLTGANST------------------STVMLGTS-PTCGLGS 822
G P FG GS T +S S+V G+S P G S
Sbjct: 105 SSFGGSSVFGQKPAFGFGSTTTQSSPFGSTTQQSQPAFGSGIFGSSVPFGSSTPAFGATS 164
Query: 823 STGANNTSTVAFGVNSSQSLDSTSTPPFGANNALTFGSGSVTSAGTNSSPAPSFGLSGTT 1002
++ TST AFG S+ + +TSTP FGA +A FG S + G+ S+PA FG + T
Sbjct: 165 TSAFGATSTPAFGATSAPAFGATSTPSFGATSAPAFGGTSTPAFGSMSTPA--FGATSTP 222
Query: 1003 ATGSNSSLTFG-TGSAQXXXXXXXXXXXXXXXXXXXXXXXXXFGLNNTPV---------N 1152
A GS S FG TG+A FG++N PV +
Sbjct: 223 AFGSTGSPAFGSTGTA--------------------------FGVSNAPVFGTGGTFGAS 256
Query: 1153 SSPSFGLNSTPSFGSNSTPSFGLNNSQSFGSTNAXXXXXXXXXXXXXXXXXXXXXXXMPS 1332
S+P+FG +STP+FG +STP+FG ++S SF +A P+
Sbjct: 257 STPAFGTSSTPAFGGSSTPAFGASSSPSFSFGSAFGQSTPAFGSFGATSTPAFGSTSTPA 316
Query: 1333 FGISTSSAPSTVGSTS 1380
FG +++ A GSTS
Sbjct: 317 FGATSTPA---FGSTS 329
Score = 108 bits (271), Expect = 7e-21
Identities = 93/289 (32%), Positives = 128/289 (44%), Gaps = 9/289 (3%)
Frame = +1
Query: 544 NVPGSFGLSSSSAGPVSAPLF--SSTVQFGSNSIPXXXXXXXXXXXXXXXM-----TFAS 702
+ P G S+ + G +S P F +ST FGS P + TF +
Sbjct: 196 SAPAFGGTSTPAFGSMSTPAFGATSTPAFGSTGSPAFGSTGTAFGVSNAPVFGTGGTFGA 255
Query: 703 GSVPALGSGSSPTFGLGSLTGANSTSTVMLGTSPTCGLGSSTGANNTSTVAFGVNSSQSL 882
S PA G+ S+P FG GS T A S+ SP+ GS+ G + + +FG S+ +
Sbjct: 256 SSTPAFGTSSTPAFG-GSSTPAFGASS-----SPSFSFGSAFGQSTPAFGSFGATSTPAF 309
Query: 883 DSTSTPPFGANNALTFGSGSVTSAGTNSSPAPSFGLSGTTATGSNSSLTFGTGSAQXXXX 1062
STSTP FGA + FGS S+ + G S+PA FG +G+ A GS S FG +A
Sbjct: 310 GSTSTPAFGATSTPAFGSTSIPAFGATSTPA--FGSTGSPAFGS-SGTAFGMSNAS---- 362
Query: 1063 XXXXXXXXXXXXXXXXXXXXXFGLNNT-PVNSSPSFGLNSTPSFGSNSTPSFGLNNSQSF 1239
FG T +S+P+FG +S+P+FG++STPSF +S +F
Sbjct: 363 --------------------VFGTEGTFGASSTPAFGTSSSPAFGASSTPSFSFGSSPTF 402
Query: 1240 G-STNAXXXXXXXXXXXXXXXXXXXXXXXMPSFGISTSSAPSTVGSTSG 1383
G ST A P+FG STS S G G
Sbjct: 403 GQSTPAFGSSPFGTTAFGAQSSPFGSQSSTPAFG-STSFGQSPFGGQRG 450
Score = 105 bits (263), Expect = 7e-20
Identities = 95/316 (30%), Positives = 129/316 (40%), Gaps = 35/316 (11%)
Frame = +1
Query: 556 SFGLSSSSAGPVSAPLF-SSTVQFGSNSIPXXXXXXXXXXXXXXXMTFASG---SVPALG 723
+FG S + G S P F SS FG +S+ F S S PA G
Sbjct: 84 AFGSSMPAFGSSSTPAFGSSASSFGGSSVFGQKPAFGFGSTTTQSSPFGSTTQQSQPAFG 143
Query: 724 SG---SSPTFGLGSLT-GANSTSTVMLGTSPTCGLGSSTGANNTSTVAFGVNSSQSLDST 891
SG SS FG + GA STS ++P G S+ TST +FG S+ + T
Sbjct: 144 SGIFGSSVPFGSSTPAFGATSTSAFGATSTPAFGATSAPAFGATSTPSFGATSAPAFGGT 203
Query: 892 STPPFGANNALTFGSGSVTSAGTNSSPA-------------------PSFGLSGTTATGS 1014
STP FG+ + FG+ S + G+ SPA +FG S T A G+
Sbjct: 204 STPAFGSMSTPAFGATSTPAFGSTGSPAFGSTGTAFGVSNAPVFGTGGTFGASSTPAFGT 263
Query: 1015 NSSLTFGTGSAQXXXXXXXXXXXXXXXXXXXXXXXXXFGLNNTPV---NSSPSFGLNSTP 1185
+S+ FG S FG +TP S+P+FG STP
Sbjct: 264 SSTPAFGGSSTPAFGASSSPSFSFGSAFGQSTPAFGSFGATSTPAFGSTSTPAFGATSTP 323
Query: 1186 SFGSNSTPSFGLNNSQSFGSTNAXXXXXXXXXXXXXXXXXXXXXXXM-----PSFGISTS 1350
+FGS S P+FG ++ +FGST + P+FG TS
Sbjct: 324 AFGSTSIPAFGATSTPAFGSTGSPAFGSSGTAFGMSNASVFGTEGTFGASSTPAFG--TS 381
Query: 1351 SAPSTVGSTSGSFVFG 1398
S+P+ S++ SF FG
Sbjct: 382 SSPAFGASSTPSFSFG 397
Score = 66.6 bits (161), Expect = 1e-07
Identities = 85/309 (27%), Positives = 112/309 (36%), Gaps = 26/309 (8%)
Frame = +1
Query: 553 GSFGLSSSSA-GPVSAPLF--SSTVQFGSNSIPXXXXXXXXXXXXXXXM----------- 690
GSFG +S+ A G S P F +ST FGS SIP
Sbjct: 299 GSFGATSTPAFGSTSTPAFGATSTPAFGSTSIPAFGATSTPAFGSTGSPAFGSSGTAFGM 358
Query: 691 ----------TFASGSVPALGSGSSPTFGLGSLTGANSTSTVMLGTSPTCGLGS-STGAN 837
TF + S PA G+ SSP F GA+ST + G+SPT G + + G++
Sbjct: 359 SNASVFGTEGTFGASSTPAFGTSSSPAF------GASSTPSFSFGSSPTFGQSTPAFGSS 412
Query: 838 NTSTVAFGVNSSQSLDSTSTPPFGANNALTFGSGSVTSAGTNSSPAPSFGLSGTTATGSN 1017
T AFG SS +STP FG+ +FG S AP S TT
Sbjct: 413 PFGTTAFGAQSSPFGSQSSTPAFGST---SFGQSPFGGQRGGSRVAP---YSSTTEADGG 466
Query: 1018 SSLTFGTGSAQXXXXXXXXXXXXXXXXXXXXXXXXXFGLNNTP-VNSSPSFGLNSTPSFG 1194
S GT A G P S PS G+ FG
Sbjct: 467 S----GTQPAGKLESISAMPVYKDKSHEELRWEDYQLGDKGGPNPASQPSAGI----GFG 518
Query: 1195 SNSTPSFGLNNSQSFGSTNAXXXXXXXXXXXXXXXXXXXXXXXMPSFGISTSSAPSTVGS 1374
+++PS + S +FG T+A S G +TS+ S
Sbjct: 519 VSTSPSNPFSTSSTFGQTSA------NPFSSTSTNPFSLKPPSFNSIGFTTSATTSNPFQ 572
Query: 1375 TSGSFVFGQ 1401
++ S +FGQ
Sbjct: 573 STSSSLFGQ 581
>XP_012488652.1 PREDICTED: nuclear pore complex protein NUP98A-like isoform X3
[Gossypium raimondii] KJB39541.1 hypothetical protein
B456_007G018500 [Gossypium raimondii]
Length = 1139
Score = 110 bits (274), Expect = 3e-21
Identities = 100/316 (31%), Positives = 134/316 (42%), Gaps = 40/316 (12%)
Frame = +1
Query: 553 GSFGLSSSSAGPVSAPLFSSTVQFGSNSIPXXXXXXXXXXXXXXXMTFASGSVPALGS-- 726
G FG + SS+ FSST FG++S P F S S PA GS
Sbjct: 60 GVFGSAQSSSP------FSSTTAFGASSSPAFGSSMP---------AFGSSSTPAFGSSA 104
Query: 727 ---------GSSPTFGLGSLTGANST------------------STVMLGTS-PTCGLGS 822
G P FG GS T +S S+V G+S P G S
Sbjct: 105 SSFGGSSVFGQKPAFGFGSTTTQSSPFGSTTQQSQPAFGSGIFGSSVPFGSSTPAFGATS 164
Query: 823 STGANNTSTVAFGVNSSQSLDSTSTPPFGANNALTFGSGSVTSAGTNSSPAPSFGLSGTT 1002
++ TST AFG S+ + +TSTP FGA +A FG S + G+ S+PA FG + T
Sbjct: 165 TSAFGATSTPAFGATSAPAFGATSTPSFGATSAPAFGGTSTPAFGSMSTPA--FGATSTP 222
Query: 1003 ATGSNSSLTFG-TGSAQXXXXXXXXXXXXXXXXXXXXXXXXXFGLNNTPV---------N 1152
A GS S FG TG+A FG++N PV +
Sbjct: 223 AFGSTGSPAFGSTGTA--------------------------FGVSNAPVFGTGGTFGAS 256
Query: 1153 SSPSFGLNSTPSFGSNSTPSFGLNNSQSFGSTNAXXXXXXXXXXXXXXXXXXXXXXXMPS 1332
S+P+FG +STP+FG +STP+FG ++S SF +A P+
Sbjct: 257 STPAFGTSSTPAFGGSSTPAFGASSSPSFSFGSAFGQSTPAFGSFGATSTPAFGSTSTPA 316
Query: 1333 FGISTSSAPSTVGSTS 1380
FG +++ A GSTS
Sbjct: 317 FGATSTPA---FGSTS 329
Score = 108 bits (271), Expect = 7e-21
Identities = 93/289 (32%), Positives = 128/289 (44%), Gaps = 9/289 (3%)
Frame = +1
Query: 544 NVPGSFGLSSSSAGPVSAPLF--SSTVQFGSNSIPXXXXXXXXXXXXXXXM-----TFAS 702
+ P G S+ + G +S P F +ST FGS P + TF +
Sbjct: 196 SAPAFGGTSTPAFGSMSTPAFGATSTPAFGSTGSPAFGSTGTAFGVSNAPVFGTGGTFGA 255
Query: 703 GSVPALGSGSSPTFGLGSLTGANSTSTVMLGTSPTCGLGSSTGANNTSTVAFGVNSSQSL 882
S PA G+ S+P FG GS T A S+ SP+ GS+ G + + +FG S+ +
Sbjct: 256 SSTPAFGTSSTPAFG-GSSTPAFGASS-----SPSFSFGSAFGQSTPAFGSFGATSTPAF 309
Query: 883 DSTSTPPFGANNALTFGSGSVTSAGTNSSPAPSFGLSGTTATGSNSSLTFGTGSAQXXXX 1062
STSTP FGA + FGS S+ + G S+PA FG +G+ A GS S FG +A
Sbjct: 310 GSTSTPAFGATSTPAFGSTSIPAFGATSTPA--FGSTGSPAFGS-SGTAFGMSNAS---- 362
Query: 1063 XXXXXXXXXXXXXXXXXXXXXFGLNNT-PVNSSPSFGLNSTPSFGSNSTPSFGLNNSQSF 1239
FG T +S+P+FG +S+P+FG++STPSF +S +F
Sbjct: 363 --------------------VFGTEGTFGASSTPAFGTSSSPAFGASSTPSFSFGSSPTF 402
Query: 1240 G-STNAXXXXXXXXXXXXXXXXXXXXXXXMPSFGISTSSAPSTVGSTSG 1383
G ST A P+FG STS S G G
Sbjct: 403 GQSTPAFGSSPFGTTAFGAQSSPFGSQSSTPAFG-STSFGQSPFGGQRG 450
Score = 105 bits (263), Expect = 7e-20
Identities = 95/316 (30%), Positives = 129/316 (40%), Gaps = 35/316 (11%)
Frame = +1
Query: 556 SFGLSSSSAGPVSAPLF-SSTVQFGSNSIPXXXXXXXXXXXXXXXMTFASG---SVPALG 723
+FG S + G S P F SS FG +S+ F S S PA G
Sbjct: 84 AFGSSMPAFGSSSTPAFGSSASSFGGSSVFGQKPAFGFGSTTTQSSPFGSTTQQSQPAFG 143
Query: 724 SG---SSPTFGLGSLT-GANSTSTVMLGTSPTCGLGSSTGANNTSTVAFGVNSSQSLDST 891
SG SS FG + GA STS ++P G S+ TST +FG S+ + T
Sbjct: 144 SGIFGSSVPFGSSTPAFGATSTSAFGATSTPAFGATSAPAFGATSTPSFGATSAPAFGGT 203
Query: 892 STPPFGANNALTFGSGSVTSAGTNSSPA-------------------PSFGLSGTTATGS 1014
STP FG+ + FG+ S + G+ SPA +FG S T A G+
Sbjct: 204 STPAFGSMSTPAFGATSTPAFGSTGSPAFGSTGTAFGVSNAPVFGTGGTFGASSTPAFGT 263
Query: 1015 NSSLTFGTGSAQXXXXXXXXXXXXXXXXXXXXXXXXXFGLNNTPV---NSSPSFGLNSTP 1185
+S+ FG S FG +TP S+P+FG STP
Sbjct: 264 SSTPAFGGSSTPAFGASSSPSFSFGSAFGQSTPAFGSFGATSTPAFGSTSTPAFGATSTP 323
Query: 1186 SFGSNSTPSFGLNNSQSFGSTNAXXXXXXXXXXXXXXXXXXXXXXXM-----PSFGISTS 1350
+FGS S P+FG ++ +FGST + P+FG TS
Sbjct: 324 AFGSTSIPAFGATSTPAFGSTGSPAFGSSGTAFGMSNASVFGTEGTFGASSTPAFG--TS 381
Query: 1351 SAPSTVGSTSGSFVFG 1398
S+P+ S++ SF FG
Sbjct: 382 SSPAFGASSTPSFSFG 397
Score = 66.6 bits (161), Expect = 1e-07
Identities = 85/309 (27%), Positives = 112/309 (36%), Gaps = 26/309 (8%)
Frame = +1
Query: 553 GSFGLSSSSA-GPVSAPLF--SSTVQFGSNSIPXXXXXXXXXXXXXXXM----------- 690
GSFG +S+ A G S P F +ST FGS SIP
Sbjct: 299 GSFGATSTPAFGSTSTPAFGATSTPAFGSTSIPAFGATSTPAFGSTGSPAFGSSGTAFGM 358
Query: 691 ----------TFASGSVPALGSGSSPTFGLGSLTGANSTSTVMLGTSPTCGLGS-STGAN 837
TF + S PA G+ SSP F GA+ST + G+SPT G + + G++
Sbjct: 359 SNASVFGTEGTFGASSTPAFGTSSSPAF------GASSTPSFSFGSSPTFGQSTPAFGSS 412
Query: 838 NTSTVAFGVNSSQSLDSTSTPPFGANNALTFGSGSVTSAGTNSSPAPSFGLSGTTATGSN 1017
T AFG SS +STP FG+ +FG S AP S TT
Sbjct: 413 PFGTTAFGAQSSPFGSQSSTPAFGST---SFGQSPFGGQRGGSRVAP---YSSTTEADGG 466
Query: 1018 SSLTFGTGSAQXXXXXXXXXXXXXXXXXXXXXXXXXFGLNNTP-VNSSPSFGLNSTPSFG 1194
S GT A G P S PS G+ FG
Sbjct: 467 S----GTQPAGKLESISAMPVYKDKSHEELRWEDYQLGDKGGPNPASQPSAGI----GFG 518
Query: 1195 SNSTPSFGLNNSQSFGSTNAXXXXXXXXXXXXXXXXXXXXXXXMPSFGISTSSAPSTVGS 1374
+++PS + S +FG T+A S G +TS+ S
Sbjct: 519 VSTSPSNPFSTSSTFGQTSA------NPFSSTSTNPFSLKPPSFNSIGFTTSATTSNPFQ 572
Query: 1375 TSGSFVFGQ 1401
++ S +FGQ
Sbjct: 573 STSSSLFGQ 581