BLASTX nr result

ID: Ephedra29_contig00003254 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra29_contig00003254
         (571 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ACN39861.1 unknown [Picea sitchensis]                                  82   1e-14
OAE20129.1 hypothetical protein AXG93_3818s1270 [Marchantia poly...    56   6e-06

>ACN39861.1 unknown [Picea sitchensis]
          Length = 1011

 Score = 81.6 bits (200), Expect = 1e-14
 Identities = 61/189 (32%), Positives = 86/189 (45%), Gaps = 3/189 (1%)
 Frame = -3

Query: 569  AFDSLEEVYRDAFLDICSFFLGCRWHVVESILGEDVLRLLERRALIKRQHVDWRQRASSF 390
            A+D L E  +D FLDICS+F G  W +V +I+G   L++L  RALI              
Sbjct: 544  AYDKLPEDCKDPFLDICSYFEGWDWEIVANIMGGRELKMLADRALI-------------- 589

Query: 389  RKLEQADVQVHDFILEIGRKRCNGSRITNV--GQLRALL-SAQEEAFKGVKGIFLQEPLE 219
             K     + VHD IL +GR++  G R   +   Q +  L   +EE  + +KGI+  E   
Sbjct: 590  TKNTNGVISVHDVILTLGRRKSEGVRFMFISGSQFKKFLDKKKEEEIQKIKGIWFSE--- 646

Query: 218  EVTESLKGETLQFSAKQLDILSSSLRVFSTGCRDRFFAAVEILGTCKGSFEKLVFWDSPK 39
                    + L  SA  LD +  SLR+   G         +I G C   FE L+F++   
Sbjct: 647  ------NKDLLSISATILDSMHKSLRILRLG------KLTKIEGKCSEIFESLIFFEGEV 694

Query: 38   AEPPFVVNK 12
               PF V K
Sbjct: 695  PGLPFGVKK 703


>OAE20129.1 hypothetical protein AXG93_3818s1270 [Marchantia polymorpha subsp.
            polymorpha]
          Length = 1081

 Score = 56.2 bits (134), Expect = 6e-06
 Identities = 55/205 (26%), Positives = 90/205 (43%), Gaps = 20/205 (9%)
 Frame = -3

Query: 566  FDSLEEVYRDAFLDICSFFLGCRWHVVESILGEDVLRLLERRALIKRQHVD--------- 414
            +D L+   ++AFLDI  FF G  W +V+ I+G+  ++ L  +ALI     D         
Sbjct: 560  YDRLDMTLKEAFLDISIFFRGWDWRIVDRIVGKPAMKSLMSQALIAASKKDTESLYGIAQ 619

Query: 413  WRQRASSFRKLEQADVQVHDFILEIGRKRCNGSRITNVGQL----RALLSAQEEAFKGVK 246
            W + +    K+E   V +HD +  IG +R  G+R+ +  Q     R L+         +K
Sbjct: 620  WTRYSEHPWKVEL--VGMHDLLAAIGSRRAQGNRVQSEDQTHLPERLLVDGPGNELSNIK 677

Query: 245  GIFLQEPLEEVTESLKGETLQ-FSAKQLDILSSSLRVFSTGCRDRFFAAVEILGTCKGSF 69
            G+     L    E+L+G  L+  S  +L IL        TG R          G C  + 
Sbjct: 678  GL----SLLSCKEALQGHMLERMSNLRLLIL------HDTGVR----------GYCTKAL 717

Query: 68   EKLVFWDSPKAEP------PFVVNK 12
             +L F+   +++P      PF +N+
Sbjct: 718  SQLQFFYWGRSQPASEVKIPFQMNR 742


Top