BLASTX nr result
ID: Ephedra29_contig00002656
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra29_contig00002656
(2268 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
YP_002519978.1 ATP-dependent Clp protease proteolytic subunit (c... 447 e-151
YP_009231446.1 ATP-dependent Clp protease proteolytic subunit (c... 445 e-150
YP_009193260.1 ATP-dependent Clp protease proteolytic subunit (c... 263 6e-79
YP_002519976.1 ribosomal protein L20 (chloroplast) [Ephedra equi... 209 7e-61
AKH66235.1 ribosomal protein L20 (chloroplast) [Ephedra torreyana] 207 3e-60
AKH66239.1 ribosomal protein L20 (chloroplast) [Ephedra trifurca... 206 1e-59
AKH66171.1 ribosomal protein L20 (chloroplast) [Ephedra aphylla] 205 4e-59
YP_009231444.1 ribosomal protein L20 (chloroplast) [Ephedra foem... 203 1e-58
BAH11204.1 ATP-dependent Clp protease proteolytic subunit (chlor... 199 4e-55
YP_001876601.1 ATP-dependent clp protease proteolytic subunit [W... 197 2e-54
YP_001876599.1 ribosomal protein L20 [Welwitschia mirabilis] B2Y... 145 2e-37
GAQ93719.1 ATP-dependent Clp protease proteolytic subunit (chlor... 144 1e-35
YP_004276301.1 ATP-dependent Clp protease proteolytic subunit [P... 142 3e-35
ANI26010.1 proteolytic subunit 2 of clp protease (chloroplast) [... 142 5e-35
YP_009033588.1 proteolytic subunit 2 of clp protease (chloroplas... 142 5e-35
NP_817171.1 ATP-dependent Clp protease proteolytic subunit [Pinu... 141 6e-35
YP_004276371.1 ATP-dependent Clp protease proteolytic subunit [P... 141 6e-35
YP_004021760.1 clp protease proteolytic subunit (chloroplast) [E... 140 1e-34
NP_050836.1 ATP-dependent Clp protease proteolytic subunit (chlo... 140 1e-34
YP_007374739.1 ATP-dependent Clp protease proteolytic subunit 1 ... 140 2e-34
>YP_002519978.1 ATP-dependent Clp protease proteolytic subunit (chloroplast) [Ephedra
equisetina] BAH11346.1 ATP-dependent Clp protease
proteolytic subunit (chloroplast) [Ephedra equisetina]
Length = 221
Score = 447 bits (1151), Expect = e-151
Identities = 221/221 (100%), Positives = 221/221 (100%)
Frame = -3
Query: 1888 MSRTRCIFLGQPVDEDIGSIFVGILLYLFIDDIRKGKSRQIFMYINSCGGAILPGLSIFD 1709
MSRTRCIFLGQPVDEDIGSIFVGILLYLFIDDIRKGKSRQIFMYINSCGGAILPGLSIFD
Sbjct: 1 MSRTRCIFLGQPVDEDIGSIFVGILLYLFIDDIRKGKSRQIFMYINSCGGAILPGLSIFD 60
Query: 1708 IMLQLRETIHTIGLGLVASTATLVLSAGTFGFRNTGPHSRIMIHQPRASLRDGPAWLFAK 1529
IMLQLRETIHTIGLGLVASTATLVLSAGTFGFRNTGPHSRIMIHQPRASLRDGPAWLFAK
Sbjct: 61 IMLQLRETIHTIGLGLVASTATLVLSAGTFGFRNTGPHSRIMIHQPRASLRDGPAWLFAK 120
Query: 1528 DAFFVQQLRKMIVQCYCLRTPQFEELIENALDKNTYMSPEEAVDFGLVDRVALPMWEPNK 1349
DAFFVQQLRKMIVQCYCLRTPQFEELIENALDKNTYMSPEEAVDFGLVDRVALPMWEPNK
Sbjct: 121 DAFFVQQLRKMIVQCYCLRTPQFEELIENALDKNTYMSPEEAVDFGLVDRVALPMWEPNK 180
Query: 1348 EEPPFEIPEEGNEGFGLIPNHVLEEARRARKIRSTKGAVQD 1226
EEPPFEIPEEGNEGFGLIPNHVLEEARRARKIRSTKGAVQD
Sbjct: 181 EEPPFEIPEEGNEGFGLIPNHVLEEARRARKIRSTKGAVQD 221
>YP_009231446.1 ATP-dependent Clp protease proteolytic subunit (chloroplast) [Ephedra
foeminea] ALV90161.1 ATP-dependent Clp protease
proteolytic subunit (chloroplast) [Ephedra foeminea]
Length = 221
Score = 445 bits (1145), Expect = e-150
Identities = 220/220 (100%), Positives = 220/220 (100%)
Frame = -3
Query: 1888 MSRTRCIFLGQPVDEDIGSIFVGILLYLFIDDIRKGKSRQIFMYINSCGGAILPGLSIFD 1709
MSRTRCIFLGQPVDEDIGSIFVGILLYLFIDDIRKGKSRQIFMYINSCGGAILPGLSIFD
Sbjct: 1 MSRTRCIFLGQPVDEDIGSIFVGILLYLFIDDIRKGKSRQIFMYINSCGGAILPGLSIFD 60
Query: 1708 IMLQLRETIHTIGLGLVASTATLVLSAGTFGFRNTGPHSRIMIHQPRASLRDGPAWLFAK 1529
IMLQLRETIHTIGLGLVASTATLVLSAGTFGFRNTGPHSRIMIHQPRASLRDGPAWLFAK
Sbjct: 61 IMLQLRETIHTIGLGLVASTATLVLSAGTFGFRNTGPHSRIMIHQPRASLRDGPAWLFAK 120
Query: 1528 DAFFVQQLRKMIVQCYCLRTPQFEELIENALDKNTYMSPEEAVDFGLVDRVALPMWEPNK 1349
DAFFVQQLRKMIVQCYCLRTPQFEELIENALDKNTYMSPEEAVDFGLVDRVALPMWEPNK
Sbjct: 121 DAFFVQQLRKMIVQCYCLRTPQFEELIENALDKNTYMSPEEAVDFGLVDRVALPMWEPNK 180
Query: 1348 EEPPFEIPEEGNEGFGLIPNHVLEEARRARKIRSTKGAVQ 1229
EEPPFEIPEEGNEGFGLIPNHVLEEARRARKIRSTKGAVQ
Sbjct: 181 EEPPFEIPEEGNEGFGLIPNHVLEEARRARKIRSTKGAVQ 220
>YP_009193260.1 ATP-dependent Clp protease proteolytic subunit (chloroplast) [Gnetum
ula] BAN16907.1 ATP-dependent Clp protease proteolytic
subunit (chloroplast) [Gnetum ula] BAT70169.1
ATP-dependent Clp protease proteolytic subunit
(chloroplast) [Gnetum ula]
Length = 264
Score = 263 bits (672), Expect = 6e-79
Identities = 125/213 (58%), Positives = 161/213 (75%)
Frame = -3
Query: 1888 MSRTRCIFLGQPVDEDIGSIFVGILLYLFIDDIRKGKSRQIFMYINSCGGAILPGLSIFD 1709
M +TRCIFLGQP+ +G VG+LL + DI + ++R IF+YINSCGGAI+ GLSI+D
Sbjct: 1 MCQTRCIFLGQPLTTPLGGFIVGLLLSYYFSDIAEYRNRPIFVYINSCGGAIMAGLSIYD 60
Query: 1708 IMLQLRETIHTIGLGLVASTATLVLSAGTFGFRNTGPHSRIMIHQPRASLRDGPAWLFAK 1529
+++++E ++T GLG+VAST+TLVL AG + FR P+SRIMIHQPRA +R AW F +
Sbjct: 61 TIMKIKERVYTTGLGIVASTSTLVLIAGAYSFRYAAPNSRIMIHQPRARIRHEAAWRFVR 120
Query: 1528 DAFFVQQLRKMIVQCYCLRTPQFEELIENALDKNTYMSPEEAVDFGLVDRVALPMWEPNK 1349
+A FV QLRK ++ CY +RTPQ E I+ ALD T+MSPEEA++FGLVDR+ L W PNK
Sbjct: 121 NAEFVTQLRKHLLHCYAMRTPQHEPFIDRALDVYTFMSPEEAINFGLVDRIGLANWAPNK 180
Query: 1348 EEPPFEIPEEGNEGFGLIPNHVLEEARRARKIR 1250
E+PPFEIPEEGNEGF L P VLE R +R+IR
Sbjct: 181 EDPPFEIPEEGNEGFELAPPMVLEAGRISRRIR 213
>YP_002519976.1 ribosomal protein L20 (chloroplast) [Ephedra equisetina] BAH11344.1
ribosomal protein L20 (chloroplast) [Ephedra equisetina]
AKH66165.1 ribosomal protein L20 (chloroplast) [Ephedra
americana] AKH66167.1 ribosomal protein L20
(chloroplast) [Ephedra antisyphilitica] AKH66169.1
ribosomal protein L20 (chloroplast) [Ephedra
antisyphilitica] AKH66173.1 ribosomal protein L20
(chloroplast) [Ephedra aspera] AKH66175.1 ribosomal
protein L20 (chloroplast) [Ephedra aspera] AKH66177.1
ribosomal protein L20 (chloroplast) [Ephedra boelckei]
AKH66179.1 ribosomal protein L20 (chloroplast) [Ephedra
breana] AKH66181.1 ribosomal protein L20 (chloroplast)
[Ephedra californica] AKH66183.1 ribosomal protein L20
(chloroplast) [Ephedra chilensis] AKH66185.1 ribosomal
protein L20 (chloroplast) [Ephedra compacta] AKH66187.1
ribosomal protein L20 (chloroplast) [Ephedra compacta]
AKH66189.1 ribosomal protein L20 (chloroplast) [Ephedra
coryi] AKH66191.1 ribosomal protein L20 (chloroplast)
[Ephedra coryi] AKH66193.1 ribosomal protein L20
(chloroplast) [Ephedra cutleri] AKH66195.1 ribosomal
protein L20 (chloroplast) [Ephedra equisetina]
AKH66201.1 ribosomal protein L20 (chloroplast) [Ephedra
frustillata] AKH66203.1 ribosomal protein L20
(chloroplast) [Ephedra funerea] AKH66205.1 ribosomal
protein L20 (chloroplast) [Ephedra funerea] AKH66207.1
ribosomal protein L20 (chloroplast) [Ephedra intermedia]
AKH66209.1 ribosomal protein L20 (chloroplast) [Ephedra
gracilis] AKH66211.1 ribosomal protein L20 (chloroplast)
[Ephedra intermedia] AKH66213.1 ribosomal protein L20
(chloroplast) [Ephedra likiangensis] AKH66215.1
ribosomal protein L20 (chloroplast) [Ephedra minuta]
AKH66217.1 ribosomal protein L20 (chloroplast) [Ephedra
monosperma] AKH66219.1 ribosomal protein L20
(chloroplast) [Ephedra multiflora] AKH66221.1 ribosomal
protein L20 (chloroplast) [Ephedra nevadensis]
AKH66223.1 ribosomal protein L20 (chloroplast) [Ephedra
ochreata] AKH66225.1 ribosomal protein L20 (chloroplast)
[Ephedra ochreata] AKH66227.1 ribosomal protein L20
(chloroplast) [Ephedra pedunculata] AKH66229.1 ribosomal
protein L20 (chloroplast) [Ephedra pseudodistachya]
AKH66231.1 ribosomal protein L20 (chloroplast) [Ephedra
rupestris] AKH66233.1 ribosomal protein L20
(chloroplast) [Ephedra sinica] AKH66237.1 ribosomal
protein L20 (chloroplast) [Ephedra triandra] AKH66243.1
ribosomal protein L20 (chloroplast) [Ephedra tweediana]
AKH66245.1 ribosomal protein L20 (chloroplast) [Ephedra
viridis]
Length = 115
Score = 209 bits (533), Expect = 7e-61
Identities = 106/115 (92%), Positives = 106/115 (92%)
Frame = -1
Query: 378 MTRVKRGYITRRRRNKNLAFASGFHGSHSKQFRXXXXXXXXALTSAKRDRLKQKRNFRCL 199
MTRVKRGYITRRRRNKNLAFASGFHGSHSKQFR ALTSAKRDRLKQKRNFRCL
Sbjct: 1 MTRVKRGYITRRRRNKNLAFASGFHGSHSKQFRAAKQQKQKALTSAKRDRLKQKRNFRCL 60
Query: 198 WIVRINAAVRRLGVPYNKYINCMYKKRLPLNRKTLAQIATLENNSFYIISKNILA 34
WIVRINAAVRRLGVPYNKYINCMYKKRLP NRKTLAQIATLENNSFYIISKNILA
Sbjct: 61 WIVRINAAVRRLGVPYNKYINCMYKKRLPSNRKTLAQIATLENNSFYIISKNILA 115
>AKH66235.1 ribosomal protein L20 (chloroplast) [Ephedra torreyana]
Length = 115
Score = 207 bits (528), Expect = 3e-60
Identities = 105/115 (91%), Positives = 105/115 (91%)
Frame = -1
Query: 378 MTRVKRGYITRRRRNKNLAFASGFHGSHSKQFRXXXXXXXXALTSAKRDRLKQKRNFRCL 199
MTRVKRGYITRRRRNKNLAFASGFHGSHSKQFR ALTSAK DRLKQKRNFRCL
Sbjct: 1 MTRVKRGYITRRRRNKNLAFASGFHGSHSKQFRAAKQQKQKALTSAKHDRLKQKRNFRCL 60
Query: 198 WIVRINAAVRRLGVPYNKYINCMYKKRLPLNRKTLAQIATLENNSFYIISKNILA 34
WIVRINAAVRRLGVPYNKYINCMYKKRLP NRKTLAQIATLENNSFYIISKNILA
Sbjct: 61 WIVRINAAVRRLGVPYNKYINCMYKKRLPSNRKTLAQIATLENNSFYIISKNILA 115
>AKH66239.1 ribosomal protein L20 (chloroplast) [Ephedra trifurca] AKH66241.1
ribosomal protein L20 (chloroplast) [Ephedra trifurca]
Length = 115
Score = 206 bits (524), Expect = 1e-59
Identities = 105/115 (91%), Positives = 105/115 (91%)
Frame = -1
Query: 378 MTRVKRGYITRRRRNKNLAFASGFHGSHSKQFRXXXXXXXXALTSAKRDRLKQKRNFRCL 199
MTRVKRGYITRRRRNKNLAFASGFHGSHSKQFR ALTSAKRDRLKQKR FRCL
Sbjct: 1 MTRVKRGYITRRRRNKNLAFASGFHGSHSKQFRAAKQQKQKALTSAKRDRLKQKRIFRCL 60
Query: 198 WIVRINAAVRRLGVPYNKYINCMYKKRLPLNRKTLAQIATLENNSFYIISKNILA 34
WIVRINAAVRRLGVPYNKYINCMYKKRLP NRKTLAQIATLENNSFYIISKNILA
Sbjct: 61 WIVRINAAVRRLGVPYNKYINCMYKKRLPSNRKTLAQIATLENNSFYIISKNILA 115
>AKH66171.1 ribosomal protein L20 (chloroplast) [Ephedra aphylla]
Length = 115
Score = 205 bits (521), Expect = 4e-59
Identities = 105/115 (91%), Positives = 105/115 (91%)
Frame = -1
Query: 378 MTRVKRGYITRRRRNKNLAFASGFHGSHSKQFRXXXXXXXXALTSAKRDRLKQKRNFRCL 199
MTRVKRGYITRRRRNKNLAFASGFHGSHSKQFR ALTSAKRDRLKQKRNFR L
Sbjct: 1 MTRVKRGYITRRRRNKNLAFASGFHGSHSKQFRAAKQQKQKALTSAKRDRLKQKRNFRRL 60
Query: 198 WIVRINAAVRRLGVPYNKYINCMYKKRLPLNRKTLAQIATLENNSFYIISKNILA 34
WIVRINAAVRRLGVPYNKYINCMYKKRLP NRKTLAQIATLENNSFYIISKNILA
Sbjct: 61 WIVRINAAVRRLGVPYNKYINCMYKKRLPSNRKTLAQIATLENNSFYIISKNILA 115
>YP_009231444.1 ribosomal protein L20 (chloroplast) [Ephedra foeminea] AKH66197.1
ribosomal protein L20 (chloroplast) [Ephedra foeminea]
AKH66199.1 ribosomal protein L20 (chloroplast) [Ephedra
foeminea] ALV90160.1 ribosomal protein L20 (chloroplast)
[Ephedra foeminea]
Length = 115
Score = 203 bits (517), Expect = 1e-58
Identities = 104/115 (90%), Positives = 105/115 (91%)
Frame = -1
Query: 378 MTRVKRGYITRRRRNKNLAFASGFHGSHSKQFRXXXXXXXXALTSAKRDRLKQKRNFRCL 199
MTRVKRGYITRRRRNKNLAFASGFHGSHSKQFR ALTSAKRDRLKQKRNFR L
Sbjct: 1 MTRVKRGYITRRRRNKNLAFASGFHGSHSKQFRAAKQQKQKALTSAKRDRLKQKRNFRRL 60
Query: 198 WIVRINAAVRRLGVPYNKYINCMYKKRLPLNRKTLAQIATLENNSFYIISKNILA 34
WIVRINAAVRRLGVPYNKYINCMYK+RLP NRKTLAQIATLENNSFYIISKNILA
Sbjct: 61 WIVRINAAVRRLGVPYNKYINCMYKERLPSNRKTLAQIATLENNSFYIISKNILA 115
>BAH11204.1 ATP-dependent Clp protease proteolytic subunit (chloroplast)
[Welwitschia mirabilis]
Length = 254
Score = 199 bits (506), Expect = 4e-55
Identities = 100/227 (44%), Positives = 150/227 (66%), Gaps = 1/227 (0%)
Frame = -3
Query: 1918 VLDWADLYDVMSRTRCIFLGQPVDEDIGSIFVGILLYLFIDDIRKGKSRQIFMYINSCGG 1739
+LD++DL D+M+ RC+F+ P+ E+ G + + L Y F +D+ + ++R +F+YINS GG
Sbjct: 1 MLDFSDLMDLMTVQRCVFMFGPLTEEGGGVILATLFYYFFNDVAEYRNRPVFVYINSLGG 60
Query: 1738 AILPGLSIFDIMLQLRETIHTIGLGLVASTATLVLSAGTFGFRNTGPHSRIMIHQPRASL 1559
A + GL+I D M+ ++E + TI LG+VAST TL L+AGT G R+ P+S IM+HQP A L
Sbjct: 61 AFMMGLTIHDTMILIKERVFTIALGMVASTGTLTLTAGTRGIRHAAPNSLIMLHQPSADL 120
Query: 1558 RDGPAWLFAKDAFFVQQLRKMIVQCYCLRTPQFEELIENALDKNTYMSPEEAVDFGLVDR 1379
+ A F K++ V QLR+ +VQ Y +RT E+ I+ LDK +MSP A + LVD
Sbjct: 121 DNTSASEFVKESEEVNQLRRKMVQSYAIRTGHSEQFIDICLDKPLFMSPRTAWNLNLVDN 180
Query: 1378 VALPMWEPNKEEPPFEIPEEGNEGFGLIPNHVLEEA-RRARKIRSTK 1241
V +P WE N E+PPFEIP +G FG++P L + ++A +++S K
Sbjct: 181 VFVPKWELNIEDPPFEIPTDGRGIFGIVPYTYLRKGLKKAAEVKSGK 227
>YP_001876601.1 ATP-dependent clp protease proteolytic subunit [Welwitschia
mirabilis] ABY26814.1 ATP-dependent clp protease
proteolytic subunit (chloroplast) [Welwitschia mirabilis]
AMA21026.1 clp protease proteolytic subunit (plastid)
[Welwitschia mirabilis]
Length = 254
Score = 197 bits (502), Expect = 2e-54
Identities = 99/227 (43%), Positives = 150/227 (66%), Gaps = 1/227 (0%)
Frame = -3
Query: 1918 VLDWADLYDVMSRTRCIFLGQPVDEDIGSIFVGILLYLFIDDIRKGKSRQIFMYINSCGG 1739
+LD++DL D+M+ RC+F+ P+ E+ G + + L Y F +D+ + ++R +F+YINS GG
Sbjct: 1 MLDFSDLMDLMTVQRCVFMFGPLTEEGGGVILATLFYYFFNDVAEYRNRPVFVYINSLGG 60
Query: 1738 AILPGLSIFDIMLQLRETIHTIGLGLVASTATLVLSAGTFGFRNTGPHSRIMIHQPRASL 1559
A + GL+I D M+ ++E + TI LG+VAST TL L+AGT G R+ P+S IM+HQP A L
Sbjct: 61 AFMMGLTIHDTMILIKERVFTIALGMVASTGTLTLTAGTRGIRHAAPNSLIMLHQPSADL 120
Query: 1558 RDGPAWLFAKDAFFVQQLRKMIVQCYCLRTPQFEELIENALDKNTYMSPEEAVDFGLVDR 1379
+ A F K++ V QLR+ +VQ Y +RT E+ I+ LDK +MSP A + LVD
Sbjct: 121 DNTSASEFVKESEEVNQLRRKMVQSYAIRTGHSEQFIDICLDKPLFMSPRTAWNLNLVDN 180
Query: 1378 VALPMWEPNKEEPPFEIPEEGNEGFGLIPNHVLEEA-RRARKIRSTK 1241
V +P WE N E+PPF+IP +G FG++P L + ++A +++S K
Sbjct: 181 VFVPKWELNIEDPPFKIPTDGRGIFGIVPYTYLRKGLKKAAEVKSGK 227
>YP_001876599.1 ribosomal protein L20 [Welwitschia mirabilis] B2Y1Y2.1 RecName:
Full=50S ribosomal protein L20, chloroplastic ABY26812.1
ribosomal protein L20 (chloroplast) [Welwitschia
mirabilis] BAH11206.1 ribosomal protein L20
(chloroplast) [Welwitschia mirabilis] AMA21070.1
ribosomal protein L20 (plastid) [Welwitschia mirabilis]
Length = 115
Score = 145 bits (366), Expect = 2e-37
Identities = 76/115 (66%), Positives = 87/115 (75%)
Frame = -1
Query: 378 MTRVKRGYITRRRRNKNLAFASGFHGSHSKQFRXXXXXXXXALTSAKRDRLKQKRNFRCL 199
MTRVKRGYI RRRRN+ FASGF GSHSKQFR AL SAK DR+K+KR FR L
Sbjct: 1 MTRVKRGYIARRRRNRIRLFASGFKGSHSKQFRAAKQQKQRALISAKGDRIKRKRAFRRL 60
Query: 198 WIVRINAAVRRLGVPYNKYINCMYKKRLPLNRKTLAQIATLENNSFYIISKNILA 34
WI RINAAVR GV Y+K+++CMYK +LPLNRKTLAQ+ATL N F IS+ I+A
Sbjct: 61 WIARINAAVRFYGVSYSKFVHCMYKNQLPLNRKTLAQMATLHNPCFSTISQKIVA 115
>GAQ93719.1 ATP-dependent Clp protease proteolytic subunit (chloroplast)
[Klebsormidium flaccidum]
Length = 205
Score = 144 bits (362), Expect = 1e-35
Identities = 74/182 (40%), Positives = 119/182 (65%)
Frame = -3
Query: 1909 WADLYDVMSRTRCIFLGQPVDEDIGSIFVGILLYLFIDDIRKGKSRQIFMYINSCGGAIL 1730
+ D+Y+++ R R +FL Q V+++I ++ VGI++YL +D + R++FMYINS GG++L
Sbjct: 20 YVDIYNLLYRERILFLAQAVNDEICNLLVGIMVYLNAED----EKREMFMYINSPGGSVL 75
Query: 1729 PGLSIFDIMLQLRETIHTIGLGLVASTATLVLSAGTFGFRNTGPHSRIMIHQPRASLRDG 1550
GL++FD M ++ + TI +G+ S + VLS G FG R PH+R+MIHQP ++ DG
Sbjct: 76 AGLAVFDTMDYVQPDVTTICMGMAMSMGSFVLSGGEFGKRIAMPHARVMIHQPSSAYYDG 135
Query: 1549 PAWLFAKDAFFVQQLRKMIVQCYCLRTPQFEELIENALDKNTYMSPEEAVDFGLVDRVAL 1370
A F +A V ++R I + Y +RT Q LI L+++++MS EEA ++G+VD+V
Sbjct: 136 QAGEFLMEANEVLRIRDEITRIYSIRTGQPRNLISEDLERDSFMSAEEAKEYGVVDQVVA 195
Query: 1369 PM 1364
M
Sbjct: 196 SM 197
>YP_004276301.1 ATP-dependent Clp protease proteolytic subunit [Pinus monophylla]
ACP50899.1 ATP-dependent Clp protease proteolytic subunit
(chloroplast) [Pinus rzedowskii] ADX94867.1 ATP-dependent
Clp protease proteolytic subunit (chloroplast) [Pinus
monophylla] AET44589.1 ATP-dependent Clp protease
proteolytic subunit (chloroplast) [Pinus cembroides]
AET45946.1 ATP-dependent Clp protease proteolytic subunit
(chloroplast) [Pinus remota] AET46090.1 ATP-dependent Clp
protease proteolytic subunit (chloroplast) [Pinus
quadrifolia] AET46661.1 ATP-dependent Clp protease
proteolytic subunit (chloroplast) [Pinus pinceana]
AET47379.1 ATP-dependent Clp protease proteolytic subunit
(chloroplast) [Pinus maximartinezii] AET47955.1
ATP-dependent Clp protease proteolytic subunit
(chloroplast) [Pinus johannis] AET48745.1 ATP-dependent
Clp protease proteolytic subunit (chloroplast) [Pinus
edulis] AET49036.1 ATP-dependent Clp protease proteolytic
subunit (chloroplast) [Pinus discolor] AET49463.1
ATP-dependent Clp protease proteolytic subunit
(chloroplast) [Pinus culminicola]
Length = 196
Score = 142 bits (358), Expect = 3e-35
Identities = 71/179 (39%), Positives = 110/179 (61%)
Frame = -3
Query: 1909 WADLYDVMSRTRCIFLGQPVDEDIGSIFVGILLYLFIDDIRKGKSRQIFMYINSCGGAIL 1730
W DLY+ + R R +FL Q ++ +I + +G+++YL +D K IF++IN GG+++
Sbjct: 20 WVDLYNRLYRERLLFLAQDINHEIANQLMGLMVYLSAEDANK----DIFLFINCPGGSVI 75
Query: 1729 PGLSIFDIMLQLRETIHTIGLGLVASTATLVLSAGTFGFRNTGPHSRIMIHQPRASLRDG 1550
PG+ +FD+M + +HTI +G+ AS + +L G R PH+R+MIHQP +S DG
Sbjct: 76 PGVGLFDMMQVIVPNVHTICMGVAASMGSFILIGGEITKRMALPHARVMIHQPASSYYDG 135
Query: 1549 PAWLFAKDAFFVQQLRKMIVQCYCLRTPQFEELIENALDKNTYMSPEEAVDFGLVDRVA 1373
PA F +A + LR I +CY RT EE+I+ LD++ +MS EA +G+VD VA
Sbjct: 136 PAAEFHNEAKHITMLRNYITKCYVERTDNPEEVIQRDLDRDIFMSATEARAYGIVDTVA 194
>ANI26010.1 proteolytic subunit 2 of clp protease (chloroplast) [Klebsormidium
sp. SAG 51.86]
Length = 205
Score = 142 bits (357), Expect = 5e-35
Identities = 74/182 (40%), Positives = 118/182 (64%)
Frame = -3
Query: 1909 WADLYDVMSRTRCIFLGQPVDEDIGSIFVGILLYLFIDDIRKGKSRQIFMYINSCGGAIL 1730
+ D+Y+++ R R +FL Q V+++I + VGI++YL +D + R++FMYINS GG++L
Sbjct: 20 YVDIYNLLYRERILFLAQAVNDEICNQLVGIMVYLNAED----EKREMFMYINSPGGSVL 75
Query: 1729 PGLSIFDIMLQLRETIHTIGLGLVASTATLVLSAGTFGFRNTGPHSRIMIHQPRASLRDG 1550
GL++FD M ++ + TI +G+ S + VLS G FG R PH+R+MIHQP ++ DG
Sbjct: 76 AGLAVFDTMDYVQPDVTTICMGMAMSMGSFVLSGGEFGKRIAMPHARVMIHQPSSAYYDG 135
Query: 1549 PAWLFAKDAFFVQQLRKMIVQCYCLRTPQFEELIENALDKNTYMSPEEAVDFGLVDRVAL 1370
A F +A V ++R I + Y +RT Q LI L+++++MS EEA ++G+VD+V
Sbjct: 136 QAGEFLMEANEVLRIRDEITRIYSIRTGQPRNLISEDLERDSFMSAEEAKEYGVVDQVVA 195
Query: 1369 PM 1364
M
Sbjct: 196 SM 197
>YP_009033588.1 proteolytic subunit 2 of clp protease (chloroplast) [Klebsormidium
flaccidum] AHZ10970.1 proteolytic subunit 2 of clp
protease (chloroplast) [Klebsormidium flaccidum]
Length = 205
Score = 142 bits (357), Expect = 5e-35
Identities = 74/182 (40%), Positives = 118/182 (64%)
Frame = -3
Query: 1909 WADLYDVMSRTRCIFLGQPVDEDIGSIFVGILLYLFIDDIRKGKSRQIFMYINSCGGAIL 1730
+ D+Y+++ R R +FL Q V+++I + VGI++YL +D + R++FMYINS GG++L
Sbjct: 20 YVDIYNLLYRERILFLAQAVNDEICNQLVGIMVYLNAED----EKREMFMYINSPGGSVL 75
Query: 1729 PGLSIFDIMLQLRETIHTIGLGLVASTATLVLSAGTFGFRNTGPHSRIMIHQPRASLRDG 1550
GL++FD M ++ + TI +G+ S + VLS G FG R PH+R+MIHQP ++ DG
Sbjct: 76 AGLAVFDTMDYVQPDVTTICMGMAMSMGSFVLSGGEFGKRIAMPHARVMIHQPSSAYYDG 135
Query: 1549 PAWLFAKDAFFVQQLRKMIVQCYCLRTPQFEELIENALDKNTYMSPEEAVDFGLVDRVAL 1370
A F +A V ++R I + Y +RT Q LI L+++++MS EEA ++G+VD+V
Sbjct: 136 QAGEFLMEANEVLRIRDEITRIYSIRTGQPRNLISEDLERDSFMSAEEAKEYGVVDQVVA 195
Query: 1369 PM 1364
M
Sbjct: 196 SM 197
>NP_817171.1 ATP-dependent Clp protease proteolytic subunit [Pinus koraiensis]
YP_002905078.1 ATP-dependent Clp protease proteolytic
subunit [Picea sitchensis] YP_002905208.1 ATP-dependent
Clp protease proteolytic subunit [Pinus gerardiana]
YP_002905275.1 ATP-dependent Clp protease proteolytic
subunit [Pinus krempfii] YP_004276230.1 ATP-dependent Clp
protease proteolytic subunit [Pinus lambertiana]
YP_009117908.1 clp protease proteolytic subunit (plastid)
[Pinus strobus] YP_009179877.1 ATP-dependent Clp protease
proteolytic subunit (chloroplast) [Pinus bungeana]
YP_009243464.1 ATP-dependent protease subunit
(chloroplast) [Pinus armandii] YP_009249742.1
ATP-dependent clp protease proteolytic subunit
(chloroplast) [Pinus sibirica] Q85X43.1 RecName:
Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp AAO74020.1 ATP-dependent
protease subunit (chloroplast) [Pinus koraiensis]
ACO89027.1 ATP-dependent Clp protease proteolytic subunit
(chloroplast) [Picea sitchensis] ACO89308.1 ATP-dependent
Clp protease proteolytic subunit (chloroplast) [Pinus
gerardiana] ACO94180.1 ATP-dependent Clp protease
proteolytic subunit (chloroplast) [Pinus krempfii]
ACP50962.1 ATP-dependent Clp protease proteolytic subunit
(chloroplast) [Pinus sibirica] ACP51018.1 ATP-dependent
Clp protease proteolytic subunit (chloroplast) [Pinus
squamata] ACP51082.1 ATP-dependent Clp protease
proteolytic subunit (chloroplast) [Pinus strobus]
ACP51452.1 ATP-dependent Clp protease proteolytic subunit
(chloroplast) [Pinus albicaulis] ACP51583.1 ATP-dependent
Clp protease proteolytic subunit (chloroplast) [Pinus
armandii] ACP51704.1 ATP-dependent Clp protease
proteolytic subunit (chloroplast) [Pinus ayacahuite]
ACP51947.1 ATP-dependent Clp protease proteolytic subunit
(chloroplast) [Pinus cembra] ACP52066.1 ATP-dependent Clp
protease proteolytic subunit (chloroplast) [Pinus
flexilis] ACP52131.1 ATP-dependent Clp protease
proteolytic subunit (chloroplast) [Pinus lambertiana]
ACP52321.1 ATP-dependent Clp protease proteolytic subunit
(chloroplast) [Pinus monticola] ACP52383.1 ATP-dependent
Clp protease proteolytic subunit (chloroplast) [Pinus
parviflora var. pentaphylla] ACP52446.1 ATP-dependent Clp
protease proteolytic subunit (chloroplast) [Pinus peuce]
ACV32804.1 ATP-dependent Clp protease proteolytic subunit
(plastid) [Pinus monticola] ACV32831.1 ATP-dependent Clp
protease proteolytic subunit (plastid) [Pinus monticola]
ACV32859.1 ATP-dependent Clp protease proteolytic subunit
(plastid) [Pinus monticola] ACV32888.1 ATP-dependent Clp
protease proteolytic subunit (plastid) [Pinus monticola]
ACV32915.1 ATP-dependent Clp protease proteolytic subunit
(plastid) [Pinus monticola] ACV32942.1 ATP-dependent Clp
protease proteolytic subunit (plastid) [Pinus monticola]
ACV32970.1 ATP-dependent Clp protease proteolytic subunit
(plastid) [Pinus monticola] ACV32997.1 ATP-dependent Clp
protease proteolytic subunit (plastid) [Pinus monticola]
ACV33023.1 ATP-dependent Clp protease proteolytic subunit
(plastid) [Pinus monticola] ACV33050.1 ATP-dependent Clp
protease proteolytic subunit (plastid) [Pinus monticola]
ADX89754.1 ATP-dependent Clp protease proteolytic subunit
(chloroplast) [Pinus lambertiana] AET44517.1
ATP-dependent Clp protease proteolytic subunit
(chloroplast) [Pinus chiapensis] AET44733.1 ATP-dependent
Clp protease proteolytic subunit (chloroplast) [Pinus
bungeana] AET44947.1 ATP-dependent Clp protease
proteolytic subunit (chloroplast) [Pinus amamiana]
AET45159.1 ATP-dependent Clp protease proteolytic subunit
(chloroplast) [Pinus kwangtungensis] AET45230.1
ATP-dependent Clp protease proteolytic subunit
(chloroplast) [Pinus wallichiana] AET45588.1
ATP-dependent Clp protease proteolytic subunit
(chloroplast) [Pinus strobiformis] AET46234.1
ATP-dependent Clp protease proteolytic subunit
(chloroplast) [Pinus pumila] AET47236.1 ATP-dependent Clp
protease proteolytic subunit (chloroplast) [Pinus
morrisonicola] AET49324.1 ATP-dependent Clp protease
proteolytic subunit (chloroplast) [Pinus dalatensis]
AET49395.1 ATP-dependent Clp protease proteolytic subunit
(chloroplast) [Pinus fenzeliana var. dabeshanensis]
AJE71537.1 clp protease proteolytic subunit (plastid)
[Pinus strobus] AJT70465.1 ATP-dependent protease subunit
(chloroplast) [Pinus armandii] ALL52956.1 ATP-dependent
Clp protease proteolytic subunit (chloroplast) [Pinus
bungeana] ALO20479.1 ATP-dependent clp protease
proteolytic subunit (chloroplast) [Pinus sibirica]
ANK79094.1 ATP-dependent protease subunit (chloroplast)
[Pinus fenzeliana var. dabeshanensis]
Length = 196
Score = 141 bits (356), Expect = 6e-35
Identities = 71/179 (39%), Positives = 109/179 (60%)
Frame = -3
Query: 1909 WADLYDVMSRTRCIFLGQPVDEDIGSIFVGILLYLFIDDIRKGKSRQIFMYINSCGGAIL 1730
W DLY+ + R R +FL Q ++ +I + +G+++YL +D K IF +IN GG+++
Sbjct: 20 WVDLYNRLYRERLLFLAQDINHEIANQLMGLMVYLSAEDANK----DIFSFINCPGGSVI 75
Query: 1729 PGLSIFDIMLQLRETIHTIGLGLVASTATLVLSAGTFGFRNTGPHSRIMIHQPRASLRDG 1550
PG+ +FD+M + +HTI +G+ AS + +L G R PH+R+MIHQP +S DG
Sbjct: 76 PGVGLFDMMQVIVPNVHTICMGVAASMGSFILIGGEITKRMALPHARVMIHQPASSYYDG 135
Query: 1549 PAWLFAKDAFFVQQLRKMIVQCYCLRTPQFEELIENALDKNTYMSPEEAVDFGLVDRVA 1373
PA F +A + LR I +CY RT EE+I+ LD++ +MS EA +G+VD VA
Sbjct: 136 PAAEFHNEAKHITMLRNYITKCYIERTDNPEEVIQRDLDRDVFMSATEARAYGIVDTVA 194
>YP_004276371.1 ATP-dependent Clp protease proteolytic subunit [Pinus nelsonii]
ADX94937.1 ATP-dependent Clp protease proteolytic subunit
(chloroplast) [Pinus nelsonii]
Length = 196
Score = 141 bits (356), Expect = 6e-35
Identities = 71/179 (39%), Positives = 109/179 (60%)
Frame = -3
Query: 1909 WADLYDVMSRTRCIFLGQPVDEDIGSIFVGILLYLFIDDIRKGKSRQIFMYINSCGGAIL 1730
W DLY+ + R R +FL Q ++ +I + +G+++YL +D K IF +IN GG+++
Sbjct: 20 WVDLYNRLYRERLLFLAQDINHEIANQLMGLMVYLSAEDANK----DIFSFINCPGGSVI 75
Query: 1729 PGLSIFDIMLQLRETIHTIGLGLVASTATLVLSAGTFGFRNTGPHSRIMIHQPRASLRDG 1550
PG+ +FD+M + +HTI +G+ AS + +L G R PH+R+MIHQP +S DG
Sbjct: 76 PGVGLFDMMQVIVPNVHTICMGVAASMGSFILIGGEITKRMALPHARVMIHQPASSYYDG 135
Query: 1549 PAWLFAKDAFFVQQLRKMIVQCYCLRTPQFEELIENALDKNTYMSPEEAVDFGLVDRVA 1373
PA F +A + LR I +CY RT EE+I+ LD++ +MS EA +G+VD VA
Sbjct: 136 PAAEFHNEAKHITMLRTYITKCYIERTDNPEEVIQRDLDRDVFMSATEAQAYGIVDTVA 194
>YP_004021760.1 clp protease proteolytic subunit (chloroplast) [Equisetum arvense]
ADA63559.1 clp protease proteolytic subunit (chloroplast)
[Equisetum arvense] AEV58363.1 clp protease proteolytic
subunit (plastid) [Equisetum arvense]
Length = 204
Score = 140 bits (354), Expect = 1e-34
Identities = 73/180 (40%), Positives = 114/180 (63%)
Frame = -3
Query: 1909 WADLYDVMSRTRCIFLGQPVDEDIGSIFVGILLYLFIDDIRKGKSRQIFMYINSCGGAIL 1730
W D+Y+ + R R +FLGQ VD++I + VGI++YL +D +R +++YINS GGA+L
Sbjct: 20 WIDVYNRLYRERLLFLGQQVDDEISNQLVGIMMYLNGED----DTRDLYLYINSPGGAVL 75
Query: 1729 PGLSIFDIMLQLRETIHTIGLGLVASTATLVLSAGTFGFRNTGPHSRIMIHQPRASLRDG 1550
PG+S++D M + +HTI +GL AS + +L+ G R PH+RIMIHQP +S DG
Sbjct: 76 PGISVYDAMQFVIPDVHTICMGLAASMGSFILAGGEITKRLALPHARIMIHQPASSYYDG 135
Query: 1549 PAWLFAKDAFFVQQLRKMIVQCYCLRTPQFEELIENALDKNTYMSPEEAVDFGLVDRVAL 1370
A +A + +LR I + Y RT + ++ ++++ +MS EEA D+GL+D VA+
Sbjct: 136 QAGECVLEAEEISKLRDCITKVYVQRTGKPLRVVSEDMERDVFMSAEEARDYGLIDLVAI 195
>NP_050836.1 ATP-dependent Clp protease proteolytic subunit (chloroplast)
[Nephroselmis olivacea] Q9TL09.1 RecName:
Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp AAD54807.1 proteolytic
subunit 2 of clp protease (chloroplast) [Nephroselmis
olivacea]
Length = 208
Score = 140 bits (354), Expect = 1e-34
Identities = 76/181 (41%), Positives = 114/181 (62%)
Frame = -3
Query: 1909 WADLYDVMSRTRCIFLGQPVDEDIGSIFVGILLYLFIDDIRKGKSRQIFMYINSCGGAIL 1730
W DLY+ + R R +F+GQ + +++ + GI++YLF +D S +FMYINS GG++
Sbjct: 20 WVDLYNRLYRQRLLFMGQELGDELSNQLCGIMIYLFAED----PSIPLFMYINSPGGSVT 75
Query: 1729 PGLSIFDIMLQLRETIHTIGLGLVASTATLVLSAGTFGFRNTGPHSRIMIHQPRASLRDG 1550
GL +FDI + + + TI +G+ AS A+LVLS G+ G R PH+R+MIHQP R G
Sbjct: 76 SGLGVFDIATVMMQDVTTICVGIAASMASLVLSGGSTGQRLALPHARMMIHQPEGGSR-G 134
Query: 1549 PAWLFAKDAFFVQQLRKMIVQCYCLRTPQFEELIENALDKNTYMSPEEAVDFGLVDRVAL 1370
A ++ V++LR ++V CY RT Q E I L+++ +MSP +A +GL+D VAL
Sbjct: 135 QASDVMYESSEVERLRDIVVDCYVERTHQSRETIIIDLNRDLFMSPRQARSYGLIDAVAL 194
Query: 1369 P 1367
P
Sbjct: 195 P 195
>YP_007374739.1 ATP-dependent Clp protease proteolytic subunit 1 (chloroplast)
[Equisetum hyemale] AGC26652.1 ATP-dependent Clp protease
proteolytic subunit 1 (chloroplast) [Equisetum hyemale]
Length = 204
Score = 140 bits (353), Expect = 2e-34
Identities = 73/180 (40%), Positives = 114/180 (63%)
Frame = -3
Query: 1909 WADLYDVMSRTRCIFLGQPVDEDIGSIFVGILLYLFIDDIRKGKSRQIFMYINSCGGAIL 1730
W D+Y+ + R R +FLGQ VD++I + VGI++YL +D +R +++YINS GGA+L
Sbjct: 20 WIDVYNRLYRERLLFLGQQVDDEISNQLVGIMMYLNGED----DTRDLYLYINSPGGAVL 75
Query: 1729 PGLSIFDIMLQLRETIHTIGLGLVASTATLVLSAGTFGFRNTGPHSRIMIHQPRASLRDG 1550
PG+S++D M + +HTI +GL AS + +L+ G R PH+RIMIHQP +S DG
Sbjct: 76 PGISVYDAMQFVIPDVHTICMGLAASMGSFILAGGEITKRLALPHARIMIHQPASSYYDG 135
Query: 1549 PAWLFAKDAFFVQQLRKMIVQCYCLRTPQFEELIENALDKNTYMSPEEAVDFGLVDRVAL 1370
A +A + +LR I + Y RT + ++ ++++ +MS EEA D+GL+D VA+
Sbjct: 136 QAGECVLEAEEILKLRDCITKVYVQRTGKPLRIVSEDMERDVFMSAEEARDYGLIDLVAI 195