BLASTX nr result

ID: Ephedra29_contig00002534 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra29_contig00002534
         (1596 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ADE75986.1 unknown [Picea sitchensis]                                 105   8e-30

>ADE75986.1 unknown [Picea sitchensis]
          Length = 412

 Score =  105 bits (262), Expect(2) = 8e-30
 Identities = 75/206 (36%), Positives = 116/206 (56%), Gaps = 12/206 (5%)
 Frame = +1

Query: 409 DVKRTKQDSNCLDRLQQQN-----PSMQSKDAYRVDRSMLTDFKKEAVIYGDRSLQKNPQ 573
           ++K  KQ+  C+D+ Q QN      +  ++D+ R D+ +      + V + D + Q+  Q
Sbjct: 12  EMKARKQELTCMDKFQLQNMVSKLDTTLTRDSQRKDKLVPQGRNSKTVYFSDVAGQRCSQ 71

Query: 574 QLAVNIDQQAALREALHSESKQSIQLGQRNGAELKIKEEFIDPVKCQVPSAVEIHESERN 753
           Q   + DQQ  +RE    ESK S    QR+  E K+KE+ ID  + Q+  ++E  E ER 
Sbjct: 72  QSTGDDDQQVTVREVSPHESKLSPHFYQRSTWEFKVKEQ-IDLERGQI--SIEETEVERI 128

Query: 754 NEDQLSTMPSNEKLDHQHLLSPKTS-QHGKMPFQWHGIGS---KDQKRDEILSRS--LQN 915
            + Q S    NE+ D QH+LS   S QHGK  FQWH +G    KDQK+D++L ++  +++
Sbjct: 129 KDHQHSMELDNEQPDQQHMLSQCFSQQHGKPSFQWHSVGQLGRKDQKKDDLLQKTKFVKS 188

Query: 916 PRD-QQGDTRNSLQSPPLVMPGEVSQ 990
            R+ Q+ + R +LQS PL   GE+SQ
Sbjct: 189 SRELQKPEVRGALQSIPLSNSGELSQ 214



 Score = 55.5 bits (132), Expect(2) = 8e-30
 Identities = 42/99 (42%), Positives = 58/99 (58%), Gaps = 2/99 (2%)
 Frame = +3

Query: 1110 AVSMVNANQNDLQHQQLQGPMPVIRQRSNSIPKS-ATNGVASPGSVTNPLIQSNVNG-ST 1283
            +V+ VN++Q D Q Q +Q  M   R RSNS+P++  ++GVAS  S+T  +  SN+N  ST
Sbjct: 255  SVTGVNSSQLDSQKQWVQPSMSFGRHRSNSLPETPLSSGVASVESITGSMTPSNINSPST 314

Query: 1284 RTASMSSLVTCKTDPSKADASKQDPQAKQHEVISKLVSV 1400
             TA   SLV     P  A +     Q KQ E ISKL+S+
Sbjct: 315  GTAPKPSLVAKADQPVVALS-----QNKQVETISKLMSL 348


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