BLASTX nr result

ID: Ephedra29_contig00002107 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra29_contig00002107
         (244 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ABR17479.1 unknown [Picea sitchensis]                                  59   2e-08
XP_006852556.1 PREDICTED: reticulon-4-interacting protein 1, mit...    54   1e-06
XP_015899148.1 PREDICTED: reticulon-4-interacting protein 1, mit...    52   5e-06

>ABR17479.1 unknown [Picea sitchensis]
          Length = 366

 Score = 59.3 bits (142), Expect = 2e-08
 Identities = 27/35 (77%), Positives = 31/35 (88%)
 Frame = -2

Query: 105 RSMSTCRAVVLPKFGGPGVLEVRHNVKIPELGQSE 1
           R +STCRAVVLP+FGGP VLEVRHNV +P+LG SE
Sbjct: 26  RLISTCRAVVLPRFGGPEVLEVRHNVGLPDLGASE 60


>XP_006852556.1 PREDICTED: reticulon-4-interacting protein 1, mitochondrial
           [Amborella trichopoda] ERN14023.1 hypothetical protein
           AMTR_s00021p00197950 [Amborella trichopoda]
          Length = 362

 Score = 54.3 bits (129), Expect = 1e-06
 Identities = 24/32 (75%), Positives = 28/32 (87%)
 Frame = -2

Query: 96  STCRAVVLPKFGGPGVLEVRHNVKIPELGQSE 1
           +TCRAVVLP+FGGP VLEVRHNV++PEL   E
Sbjct: 25  TTCRAVVLPRFGGPEVLEVRHNVEVPELKPRE 56


>XP_015899148.1 PREDICTED: reticulon-4-interacting protein 1, mitochondrial
           [Ziziphus jujuba]
          Length = 371

 Score = 52.4 bits (124), Expect = 5e-06
 Identities = 27/45 (60%), Positives = 33/45 (73%)
 Frame = -2

Query: 135 SRKYGERCWKRSMSTCRAVVLPKFGGPGVLEVRHNVKIPELGQSE 1
           S K G RC+   ++TCRAVVLP FGGP VLE+R NV IP+L  +E
Sbjct: 24  SMKVGLRCF---VTTCRAVVLPHFGGPEVLELRPNVNIPDLKPNE 65


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