BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra29_contig00001910
         (2867 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KYP56875.1 Retrovirus-related Pol polyprotein LINE-1 [Cajanus ca...   753   0.0  
CCH50976.1 T4.15 [Malus x robusta]                                    747   0.0  
ONM58670.1 Retrovirus-related Pol polyprotein LINE-1 [Zea mays]       728   0.0  
ONM06836.1 Retrovirus-related Pol polyprotein LINE-1 [Zea mays]       726   0.0  
ONM55524.1 Retrovirus-related Pol polyprotein LINE-1 [Zea mays]       729   0.0  
AQK62958.1 Retrovirus-related Pol polyprotein LINE-1 [Zea mays]       725   0.0  
ONL98233.1 Retrovirus-related Pol polyprotein LINE-1 [Zea mays] ...   727   0.0  
ONM07016.1 Retrovirus-related Pol polyprotein LINE-1 [Zea mays]       717   0.0  
AQK98364.1 Retrovirus-related Pol polyprotein LINE-1 [Zea mays]       726   0.0  
ONM03863.1 Retrovirus-related Pol polyprotein LINE-1 [Zea mays]       726   0.0  
ONL94081.1 Retrovirus-related Pol polyprotein LINE-1 [Zea mays] ...   726   0.0  
ONM55942.1 Retrovirus-related Pol polyprotein LINE-1 [Zea mays]       725   0.0  
AQK43450.1 Retrovirus-related Pol polyprotein LINE-1 [Zea mays]       721   0.0  
AQK78701.1 Retrovirus-related Pol polyprotein LINE-1 [Zea mays]       724   0.0  
ONM52836.1 Retrovirus-related Pol polyprotein LINE-1 [Zea mays]       724   0.0  
ONL92524.1 Retrovirus-related Pol polyprotein LINE-1 [Zea mays]       724   0.0  
AQK43109.1 Retrovirus-related Pol polyprotein LINE-1 [Zea mays]       720   0.0  
AQK49513.1 Retrovirus-related Pol polyprotein LINE-1 [Zea mays]       715   0.0  
ONM54584.1 Retrovirus-related Pol polyprotein LINE-1 [Zea mays]       723   0.0  
AQK92036.1 Retrovirus-related Pol polyprotein LINE-1 [Zea mays]       722   0.0  

>KYP56875.1 Retrovirus-related Pol polyprotein LINE-1 [Cajanus cajan]
          Length = 925

 Score =  753 bits (1943), Expect = 0.0
 Identities = 365/636 (57%), Positives = 466/636 (73%), Gaps = 2/636 (0%)
 Frame = +2

Query: 923  DARAFPLSDALRLPPGVSKNRQGASHRRPGAMINEQGFLHQSGRVRVKKQVQDSSLRLAT 1102
            +AR+ P S+AL     VS N QG  HRRP A++N QGF H S RVRVKK V ++ +R+ T
Sbjct: 9    NARSLPGSNALYGSSTVS-NVQGPLHRRPDAVLNRQGFPHTSERVRVKKLVHETKIRIGT 67

Query: 1103 WNIGTLSGKGMELVDTMLRRKVNIACLQETKWVGEKAREIENTGFKIFYTGKHRHRNGVG 1282
            WN+GTL+GK ME+VDTM+RR++N  CLQETKW+GEKA+E+ ++GFK++YTGK R RNGVG
Sbjct: 68   WNVGTLTGKAMEIVDTMIRRRINFMCLQETKWIGEKAKELYSSGFKLWYTGKVRARNGVG 127

Query: 1283 IVVDKNLKNDIVTVIRRGDRLILVKLVLGENIINIISAYAPQVGLDEFTKVQFWEQMDEL 1462
            I+VDK  + D+V V R GDR+I +KLV  ++  N+ISAYAPQ+G +E  KVQFWE ++ +
Sbjct: 128  IIVDKEWRKDVVEVKRVGDRIIALKLVARKDTTNVISAYAPQIGSEEHHKVQFWEDLEGV 187

Query: 1463 IQEIPASEKIYIGGDFNGHVGEDRLGYEMVHGGYGIGDRNDLGESILDFAMAYGLVLVNT 1642
            IQ IP  EKI++GGD NGHVG D  GYE  HGG+G+G  N  G++ILDF++A+ L +VNT
Sbjct: 188  IQGIPMGEKIFLGGDLNGHVGGDSRGYEGFHGGHGLGVANREGKTILDFSLAFDLTIVNT 247

Query: 1643 YFKKRFEHLITFKSGTNKSQIDFFITRKGDRLTCKDCKVIPGESLTTQHRIMVMDIKIKK 1822
             FKKR EHLIT+KSG   SQIDFF+ RK DR  C DCKVIP ESLTTQHR++VMD+++KK
Sbjct: 248  CFKKREEHLITYKSGMVCSQIDFFLVRKSDRKFCMDCKVIPSESLTTQHRVLVMDVRVKK 307

Query: 1823 QYRARKEKINPRTKWWNLKGEKLELFKNKILKEAPWNIEDETNTMWNKMAACIRGVSKEI 2002
            +   +     PR +WW LKG+    F  K L+E  W+ +D  N MW  MA  IR ++KE 
Sbjct: 308  RMERKGHDKVPRIRWWKLKGDDQGRFLRKALEEGSWDKQDNANEMWEGMAKVIRRIAKET 367

Query: 2003 LGESKGRGPQFKETWWWNEEVQNVVKNKRECFKTWQQTRSKESFEXXXXXXXXXXXMVSE 2182
            LGES+G GP+ KE+WWW   VQ  VK KR C+K W   R+ ES+E            VSE
Sbjct: 368  LGESRGFGPRGKESWWWEANVQEKVKVKRTCYKIWSTGRNAESWENYKAAKREVKKAVSE 427

Query: 2183 AKSKAYDDLYTKLGTLEGEKIIYKIAKLRDRKTKDLHSIKCIKSEDSRVLVKDEEIKERW 2362
            A+++AYD LYT LGT EGE+ IY++AK RDR+T+DL  +KCIK  + RVLV D +IKERW
Sbjct: 428  ARARAYDGLYTSLGTKEGEQSIYRLAKSRDRRTRDLEQVKCIKDGEGRVLVSDMDIKERW 487

Query: 2363 KSYFEKLLNEENGDRQN--MEEPREIRPNTFFRRIRTSEVRAALKKMKPGRALGPDGIPI 2536
            +SYF  L  E+    Q+  ++   E    T+ RRI   EVR ALK+++ G+A+GPD IPI
Sbjct: 488  RSYFHSLFTEDQDRLQSYRIDRREEGLNYTYCRRIGEVEVREALKRLENGKAVGPDNIPI 547

Query: 2537 EVWKCLGEAGVSWITKMFNKIIMTKRMPDEWRKSVLVPIYKNKGDIQCCSNYRGIKLMSH 2716
            EVWK LG  G+SW+TK+FN+I+ + +MP+EWR+S L+PIYKNKGDIQ C+NYRGIKLMSH
Sbjct: 548  EVWKTLGAKGISWLTKLFNEIMRSNKMPEEWRRSTLIPIYKNKGDIQDCANYRGIKLMSH 607

Query: 2717 TMKLWERVIEHRLRMETNVSENQFGFMPGRSTTEAI 2824
            TMKLWERVIE RLR ET V+ENQFGFMPGRST EAI
Sbjct: 608  TMKLWERVIERRLRQETQVTENQFGFMPGRSTMEAI 643


>CCH50976.1 T4.15 [Malus x robusta]
          Length = 986

 Score =  747 bits (1928), Expect = 0.0
 Identities = 370/682 (54%), Positives = 475/682 (69%), Gaps = 40/682 (5%)
 Frame = +2

Query: 899  MNPIITHTDARAFPLSDALRLPPGVSKNRQGAS--HRRPGAMINEQG------------- 1033
            MNP      ARA P+S AL  P  V  + QG+   HR P A++NEQG             
Sbjct: 1    MNPEQNRAKARASPVSGALCGPSTVI-SEQGSLYLHRHPDAVLNEQGGHRNFFSNDSTQS 59

Query: 1034 -----------------FLHQSGRVRVKK-----QVQDSSLRLATWNIGTLSGKGMELVD 1147
                             +     R RVKK     +VQ S +RL TWNIGTL+GK ME+V+
Sbjct: 60   CLGAYAPINFTRDTQKKYFDPIRRGRVKKLGQKGRVQKSKMRLGTWNIGTLTGKSMEVVE 119

Query: 1148 TMLRRKVNIACLQETKWVGEKAREIENTGFKIFYTGKHRHRNGVGIVVDKNLKNDIVTVI 1327
             M+RR++NI CLQETKWVG KA+++EN+GFK++Y+G HR RNGVGI+VDK L  D+V V 
Sbjct: 120  VMVRRRINIMCLQETKWVGSKAKDLENSGFKLWYSGTHRTRNGVGIIVDKTLVQDVVDVK 179

Query: 1328 RRGDRLILVKLVLGENIINIISAYAPQVGLDEFTKVQFWEQMDELIQEIPASEKIYIGGD 1507
            R GDR++ +K+V+ + +IN+ISAYAPQVGLD  +K +FWE + +L+Q I  +EK++IGGD
Sbjct: 180  RVGDRIMAIKIVIRQELINVISAYAPQVGLDTSSKEKFWEDLGDLVQGIAQTEKLFIGGD 239

Query: 1508 FNGHVGEDRLGYEMVHGGYGIGDRNDLGESILDFAMAYGLVLVNTYFKKRFEHLITFKSG 1687
             NGHVG +   Y   HGG+G G+RN+ GE+ILDFAMAY L L NT+FKKR EH+IT+KSG
Sbjct: 240  LNGHVGRETGNYRGFHGGHGFGERNEDGEAILDFAMAYDLFLANTFFKKREEHVITYKSG 299

Query: 1688 TNKSQIDFFITRKGDRLTCKDCKVIPGESLTTQHRIMVMDIKIKKQYRARKEKINPRTKW 1867
            ++K+QIDF + RKGDR+TCKDCKVIPGES+  QHR++VMD+ IK+  +  K    PRT+W
Sbjct: 300  SSKTQIDFLLMRKGDRITCKDCKVIPGESVANQHRLLVMDVLIKRVRQKNKTWKCPRTRW 359

Query: 1868 WNLKGEKLELFKNKILKEAPWNIEDETNTMWNKMAACIRGVSKEILGESKGRGPQFKETW 2047
            WNLK EK  +FK K++ +  W+ E E + MW+ MA+CIR V+KE+LGESKG  P  KE+W
Sbjct: 360  WNLKEEKQAIFKEKVITQCVWDREGEASQMWDSMASCIRKVAKEVLGESKGFAPHQKESW 419

Query: 2048 WWNEEVQNVVKNKRECFKTWQQTRSKESFEXXXXXXXXXXXMVSEAKSKAYDDLYTKLGT 2227
            WWNEEVQ  VK K+EC K   + R+ E+ E            V EAK  AYDD+Y +L T
Sbjct: 420  WWNEEVQTKVKAKKECCKALYKDRTDENGERYRKAKQEAKKAVREAKLAAYDDMYKRLDT 479

Query: 2228 LEGEKIIYKIAKLRDRKTKDLHSIKCIKSEDSRVLVKDEEIKERWKSYFEKLLN---EEN 2398
             EGE  IYK+A+ R++KT+DL+ ++CIK ED +VL  +  +K+RW+ YF  L N   E +
Sbjct: 480  KEGELDIYKLARAREKKTRDLNQVRCIKDEDGKVLATENAVKDRWRGYFHNLFNEGHERS 539

Query: 2399 GDRQNMEEPREIRPNTFFRRIRTSEVRAALKKMKPGRALGPDGIPIEVWKCLGEAGVSWI 2578
                 +    E R  +F+RRIR  EV  ALKKMK  +A+GPD IPIEVWK LGE G++W+
Sbjct: 540  ASLWELSNSEECRNYSFYRRIRKEEVVVALKKMKHRKAIGPDDIPIEVWKVLGETGITWL 599

Query: 2579 TKMFNKIIMTKRMPDEWRKSVLVPIYKNKGDIQCCSNYRGIKLMSHTMKLWERVIEHRLR 2758
            T +FN+I+ TK+MP+EWR S LVPIYKNKGD+Q C NYRGIKLMSHTMKLWERVIEHRLR
Sbjct: 600  TDLFNRILKTKKMPNEWRTSTLVPIYKNKGDVQNCMNYRGIKLMSHTMKLWERVIEHRLR 659

Query: 2759 METNVSENQFGFMPGRSTTEAI 2824
             ET VS+NQFGFMPGRST EAI
Sbjct: 660  QETRVSDNQFGFMPGRSTMEAI 681


>ONM58670.1 Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
          Length = 933

 Score =  728 bits (1878), Expect = 0.0
 Identities = 347/663 (52%), Positives = 467/663 (70%), Gaps = 12/663 (1%)
 Frame = +2

Query: 872  RKTLSDFYDMNP--IITHTDARAFPLSDALRLPPGVSKNRQG--------ASHRRPGAMI 1021
            R  LSD    NP  ++        P SDAL L      + QG        A HRRPG + 
Sbjct: 10   RNPLSDAPYRNPGMVLNEQGPGRHPSSDALSLDLESVISEQGSGRRILSGALHRRPGVVK 69

Query: 1022 NEQGFLHQSGRVR-VKKQVQDSSLRLATWNIGTLSGKGMELVDTMLRRKVNIACLQETKW 1198
            NEQG LH   RVR V+K V+ + +R+ +WN+G+L+GK  E+VD ++RR+VNI C+QETKW
Sbjct: 70   NEQGSLHLPRRVRRVRKLVEPTRVRVGSWNVGSLTGKLREIVDVVVRRRVNILCVQETKW 129

Query: 1199 VGEKAREIENTGFKIFYTGKHRHRNGVGIVVDKNLKNDIVTVIRRGDRLILVKLVLGENI 1378
             G+KA+E+E TGFK++YTG   ++NGVG+++DK+LK+ +V V R GDR+ILVKLV+G+ +
Sbjct: 130  KGQKAKEVEGTGFKLWYTGTATNKNGVGVLIDKSLKDGVVDVKRVGDRIILVKLVIGDLV 189

Query: 1379 INIISAYAPQVGLDEFTKVQFWEQMDELIQEIPASEKIYIGGDFNGHVGEDRLGYEMVHG 1558
            +N+ISAYAPQVGL+E +K +FWE +++++  +P  EK++IGGD NGHVG     +E VHG
Sbjct: 190  LNVISAYAPQVGLNENSKREFWEGLEDMVSSVPVGEKLFIGGDLNGHVGTSSTSFEGVHG 249

Query: 1559 GYGIGDRNDLGESILDFAMAYGLVLVNTYFKKRFEHLITFKSGTNKSQIDFFITRKGDRL 1738
            G+G G RN  GE IL+FA+AY + + NT+FKKR  HL+TF SG + SQIDF + RK DR 
Sbjct: 250  GFGFGTRNQEGEEILNFALAYDMFIANTFFKKRQSHLVTFSSGQHTSQIDFVLLRKEDRH 309

Query: 1739 TCKDCKVIPGESLTTQHRIMVMDIKIKKQYRARKEKINPRTKWWNLKGEKLELFKNKILK 1918
             C DCKVIPGE + TQH+++V D + K + +  K     RTKWW LKG+  + FK ++++
Sbjct: 310  ACLDCKVIPGECVVTQHKLVVADFRFKIRLQRNKHNKVTRTKWWKLKGDVAQTFKKRVIE 369

Query: 1919 EAPWNIEDETNTMWNKMAACIRGVSKEILGESKGRGPQFKETWWWNEEVQNVVKNKRECF 2098
            E PW  E++ N MW KMA CIR ++ E  G S+G   + K+TWWWNE+VQ  +K K++C+
Sbjct: 370  EGPWAGEEDANIMWRKMATCIRKIASEEFGLSQGNRREVKDTWWWNEDVQKAIKEKKDCY 429

Query: 2099 KTWQQTRSKESFEXXXXXXXXXXXMVSEAKSKAYDDLYTKLGTLEGEKIIYKIAKLRDRK 2278
            K     +  E+ E            VS A+ +AYDDLY +L T +GEK IY++AK+R+RK
Sbjct: 430  KRLHHDKCAENIEKYRIAKKSAKRAVSRARGQAYDDLYQRLDTKQGEKDIYRMAKIRERK 489

Query: 2279 TKDLHSIKCIKSEDSRVLVKDEEIKERWKSYFEKLLNEENGDRQ-NMEEPREIRPNTFFR 2455
            T+D++ +KCIK E +++LVK EEIK RWK YF KL N  N      ++EP +     F R
Sbjct: 490  TRDVNQVKCIKDEANQLLVKSEEIKNRWKEYFNKLFNGGNESATIELDEPFDDNNRGFVR 549

Query: 2456 RIRTSEVRAALKKMKPGRALGPDGIPIEVWKCLGEAGVSWITKMFNKIIMTKRMPDEWRK 2635
            RI+  EV+ ALK+MK G+A+GPDGIPIEVW+CLG+  + W+TK+FN I    RMPDEWR+
Sbjct: 550  RIQEYEVKEALKRMKVGKAMGPDGIPIEVWRCLGDIAIVWLTKLFNTIFRANRMPDEWRR 609

Query: 2636 SVLVPIYKNKGDIQCCSNYRGIKLMSHTMKLWERVIEHRLRMETNVSENQFGFMPGRSTT 2815
            S LVPI+KNKGD+Q C+NYRGIKLMSHTMKLWERVIEHRLR  T+V++NQFGFMPGRST 
Sbjct: 610  STLVPIFKNKGDVQSCTNYRGIKLMSHTMKLWERVIEHRLRKMTSVTQNQFGFMPGRSTM 669

Query: 2816 EAI 2824
            EAI
Sbjct: 670  EAI 672


>ONM06836.1 Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
          Length = 933

 Score =  726 bits (1875), Expect = 0.0
 Identities = 347/663 (52%), Positives = 467/663 (70%), Gaps = 12/663 (1%)
 Frame = +2

Query: 872  RKTLSDFYDMNP--IITHTDARAFPLSDALRLP--PGVSKNRQG------ASHRRPGAMI 1021
            R  LSD    NP  ++        P SDAL L   P +S+   G      A HRRP  + 
Sbjct: 10   RNPLSDAPYRNPGMVLNEQGPGRHPSSDALSLDLEPVISEQGSGRRILSGALHRRPSVVK 69

Query: 1022 NEQGFLHQSGRVR-VKKQVQDSSLRLATWNIGTLSGKGMELVDTMLRRKVNIACLQETKW 1198
            NEQG LH   RVR V+K V+ + +R+ +WN+G+L+GK  E+VD  +RR+VNI C+QETKW
Sbjct: 70   NEQGSLHLPRRVRRVRKLVEPTRVRVGSWNVGSLTGKLREIVDVAVRRRVNILCVQETKW 129

Query: 1199 VGEKAREIENTGFKIFYTGKHRHRNGVGIVVDKNLKNDIVTVIRRGDRLILVKLVLGENI 1378
             G+KA+E+E TGFK++YTG   ++NGVG+++DK+LK+ +V V R GDR+ILVKLV+G+ +
Sbjct: 130  KGQKAKEVEGTGFKLWYTGTATNKNGVGVLIDKSLKDGVVDVKRVGDRIILVKLVIGDLV 189

Query: 1379 INIISAYAPQVGLDEFTKVQFWEQMDELIQEIPASEKIYIGGDFNGHVGEDRLGYEMVHG 1558
            +N+ISAYAPQVGL+E +K +FWE +++++  +P  EK++IGGD NGHVG     +E VHG
Sbjct: 190  LNVISAYAPQVGLNENSKREFWEGLEDMVSSVPVGEKLFIGGDLNGHVGTSSTSFEGVHG 249

Query: 1559 GYGIGDRNDLGESILDFAMAYGLVLVNTYFKKRFEHLITFKSGTNKSQIDFFITRKGDRL 1738
            G+G G RN  GE IL+FA+AY + + NT+FKKR  HL+TF SG + SQIDF + RK DR 
Sbjct: 250  GFGFGTRNQEGEEILNFALAYDMFIANTFFKKRQSHLVTFSSGQHTSQIDFVLLRKEDRH 309

Query: 1739 TCKDCKVIPGESLTTQHRIMVMDIKIKKQYRARKEKINPRTKWWNLKGEKLELFKNKILK 1918
             C DCKVIPGE + TQH+++V D + K + +  K     RTKWW LKG+  + FK ++++
Sbjct: 310  ACLDCKVIPGECVVTQHKLVVADFRFKIRLQRNKHNKVTRTKWWKLKGDVAQTFKKRVIE 369

Query: 1919 EAPWNIEDETNTMWNKMAACIRGVSKEILGESKGRGPQFKETWWWNEEVQNVVKNKRECF 2098
            E PW  E++ N MW KMA CIR ++ E  G S+G   + K+TWWWNE+VQ  +K K++C+
Sbjct: 370  EGPWAGEEDANIMWRKMATCIRKIASEEFGLSQGNRREVKDTWWWNEDVQKAIKEKKDCY 429

Query: 2099 KTWQQTRSKESFEXXXXXXXXXXXMVSEAKSKAYDDLYTKLGTLEGEKIIYKIAKLRDRK 2278
            K     +  E+ E            VS A+ +AYDDLY +L T +GEK IY++AK+R+RK
Sbjct: 430  KRLHHDKCAENIEKYRIAKKSAKRAVSRARGQAYDDLYQRLDTKQGEKDIYRMAKIRERK 489

Query: 2279 TKDLHSIKCIKSEDSRVLVKDEEIKERWKSYFEKLLNEENGDRQ-NMEEPREIRPNTFFR 2455
            T+D++ +KCIK E +++LVK EEIK RWK YF KL N  N      ++EP +     F R
Sbjct: 490  TRDVNQVKCIKDEANQLLVKSEEIKNRWKEYFNKLFNGGNESATIELDEPFDDNNRGFVR 549

Query: 2456 RIRTSEVRAALKKMKPGRALGPDGIPIEVWKCLGEAGVSWITKMFNKIIMTKRMPDEWRK 2635
            RI+  EV+ ALK+MK G+A+GPDGIPIEVW+CLG+  + W+TK+FN I    RMPDEWR+
Sbjct: 550  RIQEYEVKEALKRMKVGKAMGPDGIPIEVWRCLGDIAIVWLTKLFNTIFRANRMPDEWRR 609

Query: 2636 SVLVPIYKNKGDIQCCSNYRGIKLMSHTMKLWERVIEHRLRMETNVSENQFGFMPGRSTT 2815
            S LVPI+KNKGD+Q C+NYRGIKLMSHTMKLWERVIEHRLR  T+V++NQFGFMPGRST 
Sbjct: 610  STLVPIFKNKGDVQSCTNYRGIKLMSHTMKLWERVIEHRLRKMTSVTQNQFGFMPGRSTM 669

Query: 2816 EAI 2824
            EAI
Sbjct: 670  EAI 672


>ONM55524.1 Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
          Length = 1038

 Score =  729 bits (1881), Expect = 0.0
 Identities = 348/663 (52%), Positives = 468/663 (70%), Gaps = 12/663 (1%)
 Frame = +2

Query: 872  RKTLSDFYDMNP--IITHTDARAFPLSDALRLP--PGVSKNRQG------ASHRRPGAMI 1021
            R  LSD    NP  ++        P SDAL L   P +S+   G      A HRRPG + 
Sbjct: 10   RNPLSDAPYRNPGMVLNEQGPGRHPSSDALSLDLEPVISEQGSGRRILSGALHRRPGVVK 69

Query: 1022 NEQGFLHQSGRVR-VKKQVQDSSLRLATWNIGTLSGKGMELVDTMLRRKVNIACLQETKW 1198
            NEQG LH   RVR V+K V+ + +R+ +WN+G+L+GK  E+VD  +RR+VNI C+QETKW
Sbjct: 70   NEQGSLHLPRRVRRVRKLVEPTRVRVGSWNVGSLTGKLREIVDVAVRRRVNILCVQETKW 129

Query: 1199 VGEKAREIENTGFKIFYTGKHRHRNGVGIVVDKNLKNDIVTVIRRGDRLILVKLVLGENI 1378
             G+KA+E+E TGFK++YTG   ++NGVG+++DK+LK+ +V V R GDR+ILVKLV+G+ +
Sbjct: 130  KGQKAKEVEGTGFKLWYTGTATNKNGVGVLIDKSLKDGVVDVKRVGDRIILVKLVIGDLV 189

Query: 1379 INIISAYAPQVGLDEFTKVQFWEQMDELIQEIPASEKIYIGGDFNGHVGEDRLGYEMVHG 1558
            +N+ISAYAPQVGL+E +K +FWE +++++  +P  EK++IGGD NGHVG     +E VHG
Sbjct: 190  LNVISAYAPQVGLNENSKREFWEGLEDMVSSVPVGEKLFIGGDLNGHVGTSSTSFEGVHG 249

Query: 1559 GYGIGDRNDLGESILDFAMAYGLVLVNTYFKKRFEHLITFKSGTNKSQIDFFITRKGDRL 1738
            G+G G RN  GE IL+FA+AY + + NT+FKKR  HL+TF SG + SQIDF + RK DR 
Sbjct: 250  GFGFGTRNQEGEEILNFALAYDMFIANTFFKKRQSHLVTFSSGQHTSQIDFVLLRKEDRH 309

Query: 1739 TCKDCKVIPGESLTTQHRIMVMDIKIKKQYRARKEKINPRTKWWNLKGEKLELFKNKILK 1918
             C DCKVIPGE + TQH+++V D + K + +  K     RTKWW LKG+  + FK ++++
Sbjct: 310  ACLDCKVIPGECVVTQHKLVVADFRFKIRLQRNKHNKVTRTKWWKLKGDVAQTFKKRVIE 369

Query: 1919 EAPWNIEDETNTMWNKMAACIRGVSKEILGESKGRGPQFKETWWWNEEVQNVVKNKRECF 2098
            E PW  E++ N MW KMA CIR ++ E  G S+G   + K+TWWWNE+VQ  +K K++C+
Sbjct: 370  EGPWAGEEDANIMWRKMATCIRKIASEEFGLSQGNRREVKDTWWWNEDVQKAIKEKKDCY 429

Query: 2099 KTWQQTRSKESFEXXXXXXXXXXXMVSEAKSKAYDDLYTKLGTLEGEKIIYKIAKLRDRK 2278
            K     +  E+ E            VS A+ +AYDDLY +L T +GEK IY++AK+R+RK
Sbjct: 430  KRLHHDKCAENIEKYRIAKKSAKRAVSRARGQAYDDLYQRLDTKQGEKDIYRMAKIRERK 489

Query: 2279 TKDLHSIKCIKSEDSRVLVKDEEIKERWKSYFEKLLNEENGDRQ-NMEEPREIRPNTFFR 2455
            T+D++ +KCIK E +++LVK EEIK RWK YF KL N  N      ++EP +     F R
Sbjct: 490  TRDVNQVKCIKDEANQLLVKSEEIKNRWKEYFNKLFNGGNESATIELDEPFDDNNRGFVR 549

Query: 2456 RIRTSEVRAALKKMKPGRALGPDGIPIEVWKCLGEAGVSWITKMFNKIIMTKRMPDEWRK 2635
            RI+  EV+ ALK+MK G+A+GPDGIPIEVW+CLG+  + W+TK+FN I    RMPDEWR+
Sbjct: 550  RIQEYEVKEALKRMKVGKAMGPDGIPIEVWRCLGDIAIVWLTKLFNTIFRANRMPDEWRR 609

Query: 2636 SVLVPIYKNKGDIQCCSNYRGIKLMSHTMKLWERVIEHRLRMETNVSENQFGFMPGRSTT 2815
            S LVPI+KNKGD+Q C+NYRGIKLMSHTMKLWERVIEHRLR  T+V++NQFGFMPGRST 
Sbjct: 610  STLVPIFKNKGDVQSCTNYRGIKLMSHTMKLWERVIEHRLRKMTSVTQNQFGFMPGRSTM 669

Query: 2816 EAI 2824
            EAI
Sbjct: 670  EAI 672


>AQK62958.1 Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
          Length = 935

 Score =  725 bits (1871), Expect = 0.0
 Identities = 341/639 (53%), Positives = 460/639 (71%), Gaps = 10/639 (1%)
 Frame = +2

Query: 938  PLSDALRLP--PGVSKNRQG------ASHRRPGAMINEQGFLHQSGRVR-VKKQVQDSSL 1090
            P SDAL L   P +S+   G      A HRRPG + NEQG LH   RVR V+K V+ + +
Sbjct: 12   PSSDALSLDLEPVISEQGSGRRILSGALHRRPGVVKNEQGSLHLPRRVRRVRKLVEPTRV 71

Query: 1091 RLATWNIGTLSGKGMELVDTMLRRKVNIACLQETKWVGEKAREIENTGFKIFYTGKHRHR 1270
            R+ +WN+G+L+GK  E+VD  +RR+VNI C+QETKW G+KA+E+E TGFK++YTG   ++
Sbjct: 72   RVGSWNVGSLTGKLREIVDVAVRRRVNILCVQETKWKGQKAKEVEGTGFKLWYTGTATNK 131

Query: 1271 NGVGIVVDKNLKNDIVTVIRRGDRLILVKLVLGENIINIISAYAPQVGLDEFTKVQFWEQ 1450
            NGVG+++DK+LK+ +V V R GDR+ILVKLV+G+ ++N+ISAYAPQVGL+E +K +FWE 
Sbjct: 132  NGVGVLIDKSLKDGVVDVKRVGDRIILVKLVIGDLVLNVISAYAPQVGLNENSKREFWEG 191

Query: 1451 MDELIQEIPASEKIYIGGDFNGHVGEDRLGYEMVHGGYGIGDRNDLGESILDFAMAYGLV 1630
            +++++  +P  EK++IGGD NGHVG     +E VHGG+G G RN  GE IL+FA+AY + 
Sbjct: 192  LEDMVSSVPVGEKLFIGGDLNGHVGTSSTSFEGVHGGFGFGTRNQEGEEILNFALAYDMF 251

Query: 1631 LVNTYFKKRFEHLITFKSGTNKSQIDFFITRKGDRLTCKDCKVIPGESLTTQHRIMVMDI 1810
            + NT+FKKR  HL+TF SG + SQIDF + RK DR  C DCKVIPGE + TQH+++V D 
Sbjct: 252  IANTFFKKRQSHLVTFSSGQHTSQIDFVLLRKEDRHACLDCKVIPGECVVTQHKLVVADF 311

Query: 1811 KIKKQYRARKEKINPRTKWWNLKGEKLELFKNKILKEAPWNIEDETNTMWNKMAACIRGV 1990
            + + + +  K     RTKWW LKG+  + FK ++++E PW  E++ N MW KMA CIR +
Sbjct: 312  RFRIRLQRNKHNKVTRTKWWKLKGDVAQTFKKRVIEEGPWAGEEDANIMWRKMATCIRKI 371

Query: 1991 SKEILGESKGRGPQFKETWWWNEEVQNVVKNKRECFKTWQQTRSKESFEXXXXXXXXXXX 2170
            + E  G S+G   + K+TWWWNE+VQ  +K K++C+K     +  E+ E           
Sbjct: 372  ASEEFGLSQGNRREVKDTWWWNEDVQKAIKEKKDCYKRLHHDKCAENIEKYRIAKKSAKR 431

Query: 2171 MVSEAKSKAYDDLYTKLGTLEGEKIIYKIAKLRDRKTKDLHSIKCIKSEDSRVLVKDEEI 2350
             VS A+ +AYDDLY +L T +GEK IY++AK+R+RKT+D++ +KCIK E +++LVK EEI
Sbjct: 432  AVSRARGQAYDDLYQRLDTKQGEKDIYRMAKIRERKTRDVNQVKCIKDEANQLLVKSEEI 491

Query: 2351 KERWKSYFEKLLNEENGDRQ-NMEEPREIRPNTFFRRIRTSEVRAALKKMKPGRALGPDG 2527
            K RWK YF KL N  N      ++EP +     F RRI+  EV+ ALK+MK G+A+GPDG
Sbjct: 492  KNRWKEYFNKLFNGGNESATIELDEPFDDNNRGFVRRIQEYEVKEALKRMKVGKAMGPDG 551

Query: 2528 IPIEVWKCLGEAGVSWITKMFNKIIMTKRMPDEWRKSVLVPIYKNKGDIQCCSNYRGIKL 2707
            IPIEVW+CLG+  + W+TK+FN I    RMPDEWR+S LVPI+KNKGD+Q C+NYRGIKL
Sbjct: 552  IPIEVWRCLGDIAIVWLTKLFNTIFRANRMPDEWRRSTLVPIFKNKGDVQSCTNYRGIKL 611

Query: 2708 MSHTMKLWERVIEHRLRMETNVSENQFGFMPGRSTTEAI 2824
            MSHTMKLWERVIEHRLR  T+V++NQFGFMPGRST EAI
Sbjct: 612  MSHTMKLWERVIEHRLRKMTSVTQNQFGFMPGRSTMEAI 650


>ONL98233.1 Retrovirus-related Pol polyprotein LINE-1 [Zea mays] AQK53188.1
            Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
          Length = 1016

 Score =  727 bits (1877), Expect = 0.0
 Identities = 343/639 (53%), Positives = 460/639 (71%), Gaps = 10/639 (1%)
 Frame = +2

Query: 938  PLSDALRLP--PGVSKNRQG------ASHRRPGAMINEQGFLHQSGRVR-VKKQVQDSSL 1090
            P SDAL L   P +S+   G      A HRRPG + NEQG LH   RVR V+K V+ + +
Sbjct: 12   PSSDALSLDLEPVISEQGSGRRILSGALHRRPGVVKNEQGSLHLPRRVRRVRKLVEPTRV 71

Query: 1091 RLATWNIGTLSGKGMELVDTMLRRKVNIACLQETKWVGEKAREIENTGFKIFYTGKHRHR 1270
            R+ +WN+G+L+GK  E+VD  +RR+VNI C+QETKW G+KA+E+E TGFK++YTG   ++
Sbjct: 72   RVGSWNVGSLTGKLREIVDVAVRRRVNILCVQETKWKGQKAKEVEGTGFKLWYTGTATNK 131

Query: 1271 NGVGIVVDKNLKNDIVTVIRRGDRLILVKLVLGENIINIISAYAPQVGLDEFTKVQFWEQ 1450
            NGVG+++DK+LK+ +V V R GDR+ILVKLV+G+ ++N+ISAYAPQVGL+E +K +FWE 
Sbjct: 132  NGVGVLIDKSLKDGVVDVKRVGDRIILVKLVIGDLVLNVISAYAPQVGLNENSKREFWEG 191

Query: 1451 MDELIQEIPASEKIYIGGDFNGHVGEDRLGYEMVHGGYGIGDRNDLGESILDFAMAYGLV 1630
            +++++  +P  EK++IGGD NGHVG     +E VHGG+G G RN  GE IL+FA+AY + 
Sbjct: 192  LEDMVSSVPVGEKLFIGGDLNGHVGTSSTSFEGVHGGFGFGTRNQEGEEILNFALAYDMF 251

Query: 1631 LVNTYFKKRFEHLITFKSGTNKSQIDFFITRKGDRLTCKDCKVIPGESLTTQHRIMVMDI 1810
            + NT+FKKR  HL+TF SG + SQIDF + RK DR  C DCKVIPGE + TQHR++V D 
Sbjct: 252  IANTFFKKRQSHLVTFSSGQHTSQIDFVLLRKEDRHACLDCKVIPGECVVTQHRLVVADF 311

Query: 1811 KIKKQYRARKEKINPRTKWWNLKGEKLELFKNKILKEAPWNIEDETNTMWNKMAACIRGV 1990
            + K + +  K     RTKWW LKG+  + FK ++++E PW  E++ N MW KMA CIR +
Sbjct: 312  RFKIRLQRNKHNKVTRTKWWKLKGDVAQTFKKRVIEEGPWAGEEDANIMWRKMATCIRKI 371

Query: 1991 SKEILGESKGRGPQFKETWWWNEEVQNVVKNKRECFKTWQQTRSKESFEXXXXXXXXXXX 2170
            + E  G S+G   + K+TWWWNE+VQ  +K K++C+K     +  E+ E           
Sbjct: 372  ASEEFGLSQGNRREVKDTWWWNEDVQKAIKEKKDCYKRLHHDKCAENIEKYRIAKKSAKR 431

Query: 2171 MVSEAKSKAYDDLYTKLGTLEGEKIIYKIAKLRDRKTKDLHSIKCIKSEDSRVLVKDEEI 2350
             VS A+ +AYDDLY +L T +GEK IY++AK+R+RKT+D++ +KCIK E +++LVK EEI
Sbjct: 432  AVSRARGQAYDDLYQRLDTKQGEKDIYRMAKIRERKTRDVNQVKCIKDEANQLLVKSEEI 491

Query: 2351 KERWKSYFEKLLNEENGDRQ-NMEEPREIRPNTFFRRIRTSEVRAALKKMKPGRALGPDG 2527
            K RWK YF KL N  N      ++EP +     F RRI+  EV+ ALK+MK G+A+GPDG
Sbjct: 492  KNRWKEYFNKLFNGGNESATIELDEPFDDNNRGFVRRIQEYEVKEALKRMKVGKAMGPDG 551

Query: 2528 IPIEVWKCLGEAGVSWITKMFNKIIMTKRMPDEWRKSVLVPIYKNKGDIQCCSNYRGIKL 2707
            IPIEVW+CLG+  + W+TK+FN I    RMPDEWR+S LVPI+KNKGD+Q C+NYRGIKL
Sbjct: 552  IPIEVWRCLGDIAIVWLTKLFNTIFRANRMPDEWRRSTLVPIFKNKGDVQSCTNYRGIKL 611

Query: 2708 MSHTMKLWERVIEHRLRMETNVSENQFGFMPGRSTTEAI 2824
            MSHTMKLWERVIEHRLR  T+V++NQFGFMPGRST EAI
Sbjct: 612  MSHTMKLWERVIEHRLRKMTSVTQNQFGFMPGRSTMEAI 650


>ONM07016.1 Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
          Length = 737

 Score =  717 bits (1850), Expect = 0.0
 Identities = 343/663 (51%), Positives = 467/663 (70%), Gaps = 12/663 (1%)
 Frame = +2

Query: 872  RKTLSDFYDMNP--IITHTDARAFPLSDA--LRLPPGVSKNRQG------ASHRRPGAMI 1021
            R  LSD    NP  ++        PLSDA  L L P +S+   G      A HRRPG + 
Sbjct: 10   RNPLSDAPYRNPGMVLNEQGPGRHPLSDAPSLDLEPVISEQGSGRRILSGALHRRPGVVE 69

Query: 1022 NEQGFLHQSGRVR-VKKQVQDSSLRLATWNIGTLSGKGMELVDTMLRRKVNIACLQETKW 1198
            NEQG LH   RVR V+K V+ + +R+ +WN+G+L+GK  E+VD  +RR+VNI C+QETKW
Sbjct: 70   NEQGSLHPPRRVRRVRKLVEPTRVRVGSWNVGSLTGKLREIVDVAVRRRVNILCVQETKW 129

Query: 1199 VGEKAREIENTGFKIFYTGKHRHRNGVGIVVDKNLKNDIVTVIRRGDRLILVKLVLGENI 1378
             G+KA+E+E TGFK++Y G   ++NGVG+++DK+LK+ +V V R GDR+ILVKLV+G+ +
Sbjct: 130  KGQKAKEVEGTGFKLWYAGTATNKNGVGVLIDKSLKDGVVDVKRVGDRIILVKLVIGDLV 189

Query: 1379 INIISAYAPQVGLDEFTKVQFWEQMDELIQEIPASEKIYIGGDFNGHVGEDRLGYEMVHG 1558
            +N+ISAYAPQVGL+E +K +FWE +++++  +P  EK++IGGD N HVG     +E VHG
Sbjct: 190  LNVISAYAPQVGLNENSKREFWEGLEDMVSSVPVGEKLFIGGDLNSHVGTSSTSFEGVHG 249

Query: 1559 GYGIGDRNDLGESILDFAMAYGLVLVNTYFKKRFEHLITFKSGTNKSQIDFFITRKGDRL 1738
            G+G G RN  GE IL+FA+AY + + NT+F+KR  HL+TF SG + SQIDF + RK DR 
Sbjct: 250  GFGFGTRNQEGEEILNFALAYDMFIANTFFRKRTSHLVTFISGQHTSQIDFVLLRKEDRH 309

Query: 1739 TCKDCKVIPGESLTTQHRIMVMDIKIKKQYRARKEKINPRTKWWNLKGEKLELFKNKILK 1918
             C DCKV+PGE + TQH+++V D + K + +  K     RTKWW LKG+  + FK ++++
Sbjct: 310  ACLDCKVLPGECVVTQHKLVVADFRFKIRLQRNKHNKVTRTKWWKLKGDVAQTFKERVIE 369

Query: 1919 EAPWNIEDETNTMWNKMAACIRGVSKEILGESKGRGPQFKETWWWNEEVQNVVKNKRECF 2098
            E PW  E + N MW KMA CIR ++ E  G S+G   + K+TWWWNE+VQ  +K K++C+
Sbjct: 370  EGPWAEEGDINIMWRKMAVCIRKIASEEFGLSQGNRREVKDTWWWNEDVQKAIKEKKDCY 429

Query: 2099 KTWQQTRSKESFEXXXXXXXXXXXMVSEAKSKAYDDLYTKLGTLEGEKIIYKIAKLRDRK 2278
            K     +  E+ E            VS A+ +A+D+LY +L T +GEK IY++AK+R+RK
Sbjct: 430  KRLHHDKCAENIEKYRIAKKSAKRAVSRARGQAFDNLYQRLDTKQGEKDIYRMAKIRERK 489

Query: 2279 TKDLHSIKCIKSEDSRVLVKDEEIKERWKSYFEKLLNEEN-GDRQNMEEPREIRPNTFFR 2455
            T+D++ +KCIK E +++LVK+EEIK RWK YF KL N  N      ++EP +     F R
Sbjct: 490  TRDVNQVKCIKDEANQLLVKNEEIKNRWKEYFNKLFNGGNESSTIELDEPFDDNNRGFVR 549

Query: 2456 RIRTSEVRAALKKMKPGRALGPDGIPIEVWKCLGEAGVSWITKMFNKIIMTKRMPDEWRK 2635
            RI+  EV+ ALK+MK G+A+GPDGIPIEVW+CLG+  + W+TK+FN I  T RMPDE R+
Sbjct: 550  RIQEYEVKEALKRMKVGKAMGPDGIPIEVWRCLGDIAIVWLTKLFNTIFRTNRMPDECRR 609

Query: 2636 SVLVPIYKNKGDIQCCSNYRGIKLMSHTMKLWERVIEHRLRMETNVSENQFGFMPGRSTT 2815
            S LVPI+KNKGD+Q C+NYRGIKLMSHTMKLWERVIEHRLR  T+V++NQFGFMPGRST 
Sbjct: 610  STLVPIFKNKGDVQSCTNYRGIKLMSHTMKLWERVIEHRLRKMTSVTQNQFGFMPGRSTM 669

Query: 2816 EAI 2824
            EAI
Sbjct: 670  EAI 672


>AQK98364.1 Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
          Length = 1016

 Score =  726 bits (1874), Expect = 0.0
 Identities = 342/639 (53%), Positives = 460/639 (71%), Gaps = 10/639 (1%)
 Frame = +2

Query: 938  PLSDALRLP--PGVSKNRQG------ASHRRPGAMINEQGFLHQSGRVR-VKKQVQDSSL 1090
            P SDAL L   P +S+   G      A HRRPG + NEQG LH   RVR V+K V+ + +
Sbjct: 12   PSSDALSLDLEPVISEQGSGRRILSGALHRRPGVVKNEQGSLHLPRRVRRVRKLVEPTRV 71

Query: 1091 RLATWNIGTLSGKGMELVDTMLRRKVNIACLQETKWVGEKAREIENTGFKIFYTGKHRHR 1270
            R+ +WN+G+L+GK  E+VD  +RR+VNI C+QETKW G+KA+E+E TGFK++YTG   ++
Sbjct: 72   RVGSWNVGSLTGKLREIVDVAVRRRVNILCVQETKWKGQKAKEVEGTGFKLWYTGTATNK 131

Query: 1271 NGVGIVVDKNLKNDIVTVIRRGDRLILVKLVLGENIINIISAYAPQVGLDEFTKVQFWEQ 1450
            NGVG+++DK+LK+ +V V R GDR+ILVKLV+G+ ++N+ISAYAPQVGL+E +K +FWE 
Sbjct: 132  NGVGVLIDKSLKDGVVDVKRVGDRIILVKLVIGDLVLNVISAYAPQVGLNENSKREFWEG 191

Query: 1451 MDELIQEIPASEKIYIGGDFNGHVGEDRLGYEMVHGGYGIGDRNDLGESILDFAMAYGLV 1630
            +++++  +P  EK++IGGD NGHVG     +E VHGG+G G RN  GE IL+FA+AY + 
Sbjct: 192  LEDMVSSVPVGEKLFIGGDLNGHVGTSSTSFEGVHGGFGFGTRNQEGEEILNFALAYDMF 251

Query: 1631 LVNTYFKKRFEHLITFKSGTNKSQIDFFITRKGDRLTCKDCKVIPGESLTTQHRIMVMDI 1810
            + NT+FKKR  HL+TF SG + SQIDF + RK DR  C DCKVIPGE + TQH+++V D 
Sbjct: 252  IANTFFKKRQSHLVTFSSGQHTSQIDFVLLRKEDRHACLDCKVIPGECVVTQHKLVVADF 311

Query: 1811 KIKKQYRARKEKINPRTKWWNLKGEKLELFKNKILKEAPWNIEDETNTMWNKMAACIRGV 1990
            + K + +  K     RTKWW LKG+  + FK ++++E PW  E++ N MW KMA CIR +
Sbjct: 312  RFKIRLQRNKHNKVTRTKWWKLKGDVAQTFKKRVIEEGPWAGEEDANIMWRKMATCIRKI 371

Query: 1991 SKEILGESKGRGPQFKETWWWNEEVQNVVKNKRECFKTWQQTRSKESFEXXXXXXXXXXX 2170
            + E  G S+G   + K+TWWWNE+VQ  +K K++C+K     +  E+ E           
Sbjct: 372  ASEEFGLSQGNRREVKDTWWWNEDVQKAIKEKKDCYKRLHHDKCAENIEKYRIAKKSAKR 431

Query: 2171 MVSEAKSKAYDDLYTKLGTLEGEKIIYKIAKLRDRKTKDLHSIKCIKSEDSRVLVKDEEI 2350
             VS A+ +AYDDLY +L T +GEK IY++AK+R+RKT+D++ +KCIK E +++LVK EEI
Sbjct: 432  AVSRARGQAYDDLYQRLDTKQGEKDIYRMAKIRERKTRDVNQVKCIKDEANQLLVKSEEI 491

Query: 2351 KERWKSYFEKLLNEENGDRQ-NMEEPREIRPNTFFRRIRTSEVRAALKKMKPGRALGPDG 2527
            K RWK YF KL N  N      ++EP +     F RRI+  EV+ ALK+MK G+A+GPDG
Sbjct: 492  KNRWKEYFNKLFNGGNESATIELDEPFDDNNRGFVRRIQEYEVKEALKRMKVGKAMGPDG 551

Query: 2528 IPIEVWKCLGEAGVSWITKMFNKIIMTKRMPDEWRKSVLVPIYKNKGDIQCCSNYRGIKL 2707
            IPIEVW+CLG+  + W+TK+FN I    RMPDEWR+S LVPI+KNKGD+Q C+NYRGIKL
Sbjct: 552  IPIEVWRCLGDIAIVWLTKLFNTIFRANRMPDEWRRSTLVPIFKNKGDVQSCTNYRGIKL 611

Query: 2708 MSHTMKLWERVIEHRLRMETNVSENQFGFMPGRSTTEAI 2824
            MSHTMKLWERVIEHRLR  T+V++NQFGFMPGRST EAI
Sbjct: 612  MSHTMKLWERVIEHRLRKMTSVTQNQFGFMPGRSTMEAI 650


>ONM03863.1 Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
          Length = 1016

 Score =  726 bits (1874), Expect = 0.0
 Identities = 342/639 (53%), Positives = 460/639 (71%), Gaps = 10/639 (1%)
 Frame = +2

Query: 938  PLSDALRLP--PGVSKNRQG------ASHRRPGAMINEQGFLHQSGRVR-VKKQVQDSSL 1090
            P SDAL L   P +S+   G      A HRRPG + NEQG LH   RVR V+K V+ + +
Sbjct: 12   PSSDALSLDLEPVISEQGSGRRILSGALHRRPGVVKNEQGSLHLPRRVRRVRKLVEPTRV 71

Query: 1091 RLATWNIGTLSGKGMELVDTMLRRKVNIACLQETKWVGEKAREIENTGFKIFYTGKHRHR 1270
            R+ +WN+G+L+GK  E+VD  +RR+VNI C+QETKW G+KA+E+E TGFK++YTG   ++
Sbjct: 72   RVGSWNVGSLTGKLREIVDVAVRRRVNILCVQETKWKGQKAKEVEGTGFKLWYTGTATNK 131

Query: 1271 NGVGIVVDKNLKNDIVTVIRRGDRLILVKLVLGENIINIISAYAPQVGLDEFTKVQFWEQ 1450
            NGVG+++DK+LK+ +V V R GDR+ILVKLV+G+ ++N+ISAYAPQVGL+E +K +FWE 
Sbjct: 132  NGVGVLIDKSLKDGVVDVKRVGDRIILVKLVIGDLVLNVISAYAPQVGLNENSKREFWEG 191

Query: 1451 MDELIQEIPASEKIYIGGDFNGHVGEDRLGYEMVHGGYGIGDRNDLGESILDFAMAYGLV 1630
            +++++  +P  EK++IGGD NGHVG     +E VHGG+G G RN  GE IL+FA+AY + 
Sbjct: 192  LEDMVSSVPVGEKLFIGGDLNGHVGTSSTSFEGVHGGFGFGTRNQEGEEILNFALAYDMF 251

Query: 1631 LVNTYFKKRFEHLITFKSGTNKSQIDFFITRKGDRLTCKDCKVIPGESLTTQHRIMVMDI 1810
            + NT+FKKR  HL+TF SG + SQIDF + RK DR  C DCKVIPGE + TQH+++V D 
Sbjct: 252  IANTFFKKRQSHLVTFSSGQHTSQIDFVLLRKEDRHACLDCKVIPGECVVTQHKLVVADF 311

Query: 1811 KIKKQYRARKEKINPRTKWWNLKGEKLELFKNKILKEAPWNIEDETNTMWNKMAACIRGV 1990
            + K + +  K     RTKWW LKG+  + FK ++++E PW  E++ N MW KMA CIR +
Sbjct: 312  RFKIRLQRNKHSKVTRTKWWKLKGDVAQTFKKRVIEEGPWAGEEDANIMWRKMATCIRKI 371

Query: 1991 SKEILGESKGRGPQFKETWWWNEEVQNVVKNKRECFKTWQQTRSKESFEXXXXXXXXXXX 2170
            + E  G S+G   + K+TWWWNE+VQ  +K K++C+K     +  E+ E           
Sbjct: 372  ASEEFGLSQGNRREVKDTWWWNEDVQKAIKEKKDCYKRLHHDKCAENIEKYRIAKKSAKR 431

Query: 2171 MVSEAKSKAYDDLYTKLGTLEGEKIIYKIAKLRDRKTKDLHSIKCIKSEDSRVLVKDEEI 2350
             VS A+ +AYDDLY +L T +GEK IY++AK+R+RKT+D++ +KCIK E +++LVK EEI
Sbjct: 432  AVSRARGQAYDDLYQRLDTKQGEKDIYRMAKIRERKTRDVNQVKCIKDEANQLLVKSEEI 491

Query: 2351 KERWKSYFEKLLNEENGDRQ-NMEEPREIRPNTFFRRIRTSEVRAALKKMKPGRALGPDG 2527
            K RWK YF KL N  N      ++EP +     F RRI+  EV+ ALK+MK G+A+GPDG
Sbjct: 492  KNRWKEYFNKLFNGGNESATIELDEPFDDNNRGFVRRIQEYEVKEALKRMKVGKAMGPDG 551

Query: 2528 IPIEVWKCLGEAGVSWITKMFNKIIMTKRMPDEWRKSVLVPIYKNKGDIQCCSNYRGIKL 2707
            IPIEVW+CLG+  + W+TK+FN I    RMPDEWR+S LVPI+KNKGD+Q C+NYRGIKL
Sbjct: 552  IPIEVWRCLGDIAIVWLTKLFNTIFRANRMPDEWRRSTLVPIFKNKGDVQSCTNYRGIKL 611

Query: 2708 MSHTMKLWERVIEHRLRMETNVSENQFGFMPGRSTTEAI 2824
            MSHTMKLWERVIEHRLR  T+V++NQFGFMPGRST EAI
Sbjct: 612  MSHTMKLWERVIEHRLRKMTSVTQNQFGFMPGRSTMEAI 650


>ONL94081.1 Retrovirus-related Pol polyprotein LINE-1 [Zea mays] ONM09892.1
            Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
            ONM36701.1 Retrovirus-related Pol polyprotein LINE-1 [Zea
            mays] AQK59578.1 Retrovirus-related Pol polyprotein
            LINE-1 [Zea mays]
          Length = 1016

 Score =  726 bits (1874), Expect = 0.0
 Identities = 342/639 (53%), Positives = 460/639 (71%), Gaps = 10/639 (1%)
 Frame = +2

Query: 938  PLSDALRLP--PGVSKNRQG------ASHRRPGAMINEQGFLHQSGRVR-VKKQVQDSSL 1090
            P SDAL L   P +S+   G      A HRRPG + NEQG LH   RVR V+K V+ + +
Sbjct: 12   PSSDALSLDLEPVISEQGSGRRILSGALHRRPGVVKNEQGSLHLPRRVRRVRKLVEPTRV 71

Query: 1091 RLATWNIGTLSGKGMELVDTMLRRKVNIACLQETKWVGEKAREIENTGFKIFYTGKHRHR 1270
            R+ +WN+G+L+GK  E+VD  +RR+VNI C+QETKW G+KA+E+E TGFK++YTG   ++
Sbjct: 72   RVGSWNVGSLTGKLREIVDVAVRRRVNILCVQETKWKGQKAKEVEGTGFKLWYTGTATNK 131

Query: 1271 NGVGIVVDKNLKNDIVTVIRRGDRLILVKLVLGENIINIISAYAPQVGLDEFTKVQFWEQ 1450
            NGVG+++DK+LK+ +V V R GDR+ILVKLV+G+ ++N+ISAYAPQVGL+E +K +FWE 
Sbjct: 132  NGVGVLIDKSLKDGVVDVKRVGDRIILVKLVIGDLVLNVISAYAPQVGLNENSKREFWEG 191

Query: 1451 MDELIQEIPASEKIYIGGDFNGHVGEDRLGYEMVHGGYGIGDRNDLGESILDFAMAYGLV 1630
            +++++  +P  EK++IGGD NGHVG     +E VHGG+G G RN  GE IL+FA+AY + 
Sbjct: 192  LEDMVSSVPVGEKLFIGGDLNGHVGTSSTSFEGVHGGFGFGTRNQEGEEILNFALAYDMF 251

Query: 1631 LVNTYFKKRFEHLITFKSGTNKSQIDFFITRKGDRLTCKDCKVIPGESLTTQHRIMVMDI 1810
            + NT+FKKR  HL+TF SG + SQIDF + RK DR  C DCKVIPGE + TQH+++V D 
Sbjct: 252  IANTFFKKRQSHLVTFSSGQHTSQIDFVLLRKEDRHACLDCKVIPGECVVTQHKLVVADF 311

Query: 1811 KIKKQYRARKEKINPRTKWWNLKGEKLELFKNKILKEAPWNIEDETNTMWNKMAACIRGV 1990
            + K + +  K     RTKWW LKG+  + FK ++++E PW  E++ N MW KMA CIR +
Sbjct: 312  RFKIRLQRNKHNKVTRTKWWKLKGDVAQTFKKRVIEEGPWAGEEDANIMWRKMATCIRKI 371

Query: 1991 SKEILGESKGRGPQFKETWWWNEEVQNVVKNKRECFKTWQQTRSKESFEXXXXXXXXXXX 2170
            + E  G S+G   + K+TWWWNE+VQ  +K K++C+K     +  E+ E           
Sbjct: 372  ASEEFGLSQGNRREVKDTWWWNEDVQKAIKEKKDCYKRLHHDKCAENIEKYRIAKKSAKR 431

Query: 2171 MVSEAKSKAYDDLYTKLGTLEGEKIIYKIAKLRDRKTKDLHSIKCIKSEDSRVLVKDEEI 2350
             VS A+ +AYDDLY +L T +GEK IY++AK+R+RKT+D++ +KCIK E +++LVK EEI
Sbjct: 432  AVSRARGQAYDDLYQRLDTKQGEKDIYRMAKIRERKTRDVNQVKCIKDEANQLLVKSEEI 491

Query: 2351 KERWKSYFEKLLNEENGDRQ-NMEEPREIRPNTFFRRIRTSEVRAALKKMKPGRALGPDG 2527
            K RWK YF KL N  N      ++EP +     F RRI+  EV+ ALK+MK G+A+GPDG
Sbjct: 492  KNRWKEYFNKLFNGGNESATIELDEPFDDNNRGFVRRIQEYEVKEALKRMKVGKAMGPDG 551

Query: 2528 IPIEVWKCLGEAGVSWITKMFNKIIMTKRMPDEWRKSVLVPIYKNKGDIQCCSNYRGIKL 2707
            IPIEVW+CLG+  + W+TK+FN I    RMPDEWR+S LVPI+KNKGD+Q C+NYRGIKL
Sbjct: 552  IPIEVWRCLGDIAIVWLTKLFNTIFRANRMPDEWRRSTLVPIFKNKGDVQSCTNYRGIKL 611

Query: 2708 MSHTMKLWERVIEHRLRMETNVSENQFGFMPGRSTTEAI 2824
            MSHTMKLWERVIEHRLR  T+V++NQFGFMPGRST EAI
Sbjct: 612  MSHTMKLWERVIEHRLRKMTSVTQNQFGFMPGRSTMEAI 650


>ONM55942.1 Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
          Length = 1016

 Score =  725 bits (1871), Expect = 0.0
 Identities = 342/639 (53%), Positives = 460/639 (71%), Gaps = 10/639 (1%)
 Frame = +2

Query: 938  PLSDALRLP--PGVSKNRQG------ASHRRPGAMINEQGFLHQSGRVR-VKKQVQDSSL 1090
            P SDAL L   P +S+   G      A HRRPG + NEQG LH   RVR V+K V+ + +
Sbjct: 12   PSSDALSLDLEPVISEQGSGRRILSGALHRRPGVVKNEQGSLHLPRRVRRVRKLVEPTRV 71

Query: 1091 RLATWNIGTLSGKGMELVDTMLRRKVNIACLQETKWVGEKAREIENTGFKIFYTGKHRHR 1270
            R+ +WN+G+L+GK  E+VD  +RR+VNI C+QETKW G+KA+E+E TGFK++YTG   ++
Sbjct: 72   RVGSWNVGSLTGKLREIVDVAVRRRVNILCVQETKWKGQKAKEVEGTGFKLWYTGTATNK 131

Query: 1271 NGVGIVVDKNLKNDIVTVIRRGDRLILVKLVLGENIINIISAYAPQVGLDEFTKVQFWEQ 1450
            NGVG+++DK+LK+ +V V R GDR+ILVKLV+G+ ++N+ISAYAPQVGL+E +K +FWE 
Sbjct: 132  NGVGVLIDKSLKDGVVDVKRVGDRIILVKLVIGDLVLNVISAYAPQVGLNENSKREFWEG 191

Query: 1451 MDELIQEIPASEKIYIGGDFNGHVGEDRLGYEMVHGGYGIGDRNDLGESILDFAMAYGLV 1630
            +++++  +P  EK++IGGD NGHVG     +E VHGG+G G RN  GE IL+FA+AY + 
Sbjct: 192  LEDMVSSVPVGEKLFIGGDLNGHVGTSSTSFEGVHGGFGFGTRNQEGEEILNFALAYDMF 251

Query: 1631 LVNTYFKKRFEHLITFKSGTNKSQIDFFITRKGDRLTCKDCKVIPGESLTTQHRIMVMDI 1810
            + NT+FKKR  HL+TF SG + SQIDF + RK DR  C DCKVIPGE + TQH+++V D 
Sbjct: 252  IANTFFKKRQFHLVTFSSGQHTSQIDFVLLRKEDRHACLDCKVIPGECVVTQHKLVVADF 311

Query: 1811 KIKKQYRARKEKINPRTKWWNLKGEKLELFKNKILKEAPWNIEDETNTMWNKMAACIRGV 1990
            + K + +  K     RTKWW LKG+  + FK ++++E PW  E++ N MW KMA CIR +
Sbjct: 312  RFKIRLQRNKHNKVTRTKWWKLKGDVAQTFKKRVIEEGPWAGEEDANIMWRKMATCIRKI 371

Query: 1991 SKEILGESKGRGPQFKETWWWNEEVQNVVKNKRECFKTWQQTRSKESFEXXXXXXXXXXX 2170
            + E  G S+G   + K+TWWWNE+VQ  +K K++C+K     +  E+ E           
Sbjct: 372  ASEEFGLSQGNRREVKDTWWWNEDVQKAIKEKKDCYKRLHHDKCAENIEKYRIAKKSAKR 431

Query: 2171 MVSEAKSKAYDDLYTKLGTLEGEKIIYKIAKLRDRKTKDLHSIKCIKSEDSRVLVKDEEI 2350
             VS A+ +AYDDLY +L T +GEK IY++AK+R+RKT+D++ +KCIK E +++LVK EEI
Sbjct: 432  AVSRARGQAYDDLYQRLDTKQGEKDIYRMAKIRERKTRDVNQVKCIKDEANQLLVKSEEI 491

Query: 2351 KERWKSYFEKLLNEENGDRQ-NMEEPREIRPNTFFRRIRTSEVRAALKKMKPGRALGPDG 2527
            K RWK YF KL N  N      ++EP +     F RRI+  EV+ ALK+MK G+A+GPDG
Sbjct: 492  KNRWKEYFNKLFNGGNESATIELDEPFDDNNRGFVRRIQEYEVKEALKRMKVGKAMGPDG 551

Query: 2528 IPIEVWKCLGEAGVSWITKMFNKIIMTKRMPDEWRKSVLVPIYKNKGDIQCCSNYRGIKL 2707
            IPIEVW+CLG+  + W+TK+FN I    RMPDEWR+S LVPI+KNKGD+Q C+NYRGIKL
Sbjct: 552  IPIEVWRCLGDIAIVWLTKLFNTIFRANRMPDEWRRSTLVPIFKNKGDVQSCTNYRGIKL 611

Query: 2708 MSHTMKLWERVIEHRLRMETNVSENQFGFMPGRSTTEAI 2824
            MSHTMKLWERVIEHRLR  T+V++NQFGFMPGRST EAI
Sbjct: 612  MSHTMKLWERVIEHRLRKMTSVTQNQFGFMPGRSTMEAI 650


>AQK43450.1 Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
          Length = 918

 Score =  721 bits (1861), Expect = 0.0
 Identities = 343/663 (51%), Positives = 471/663 (71%), Gaps = 12/663 (1%)
 Frame = +2

Query: 872  RKTLSDFYDMNP--IITHTDARAFPLSDA--LRLPPGVSKNRQG------ASHRRPGAMI 1021
            R  LSD    NP  ++        PLSDA  L L P +++   G      A HRRPG + 
Sbjct: 10   RNPLSDAPYRNPGMVLNEQGPGRHPLSDAPSLDLEPVINEQGSGRRILSGALHRRPGVVE 69

Query: 1022 NEQGFLHQSGRVR-VKKQVQDSSLRLATWNIGTLSGKGMELVDTMLRRKVNIACLQETKW 1198
            NEQG LH   RVR V+K V+ + +R+ +WN+G+L+GK  E+VD  +RR+VN  C+QETKW
Sbjct: 70   NEQGSLHLPRRVRRVRKLVEPTRVRVGSWNVGSLTGKLREIVDVAVRRRVNNLCVQETKW 129

Query: 1199 VGEKAREIENTGFKIFYTGKHRHRNGVGIVVDKNLKNDIVTVIRRGDRLILVKLVLGENI 1378
             G+KA+E+E TGFK++YTG   ++NGVG+++DK+LK+ +V V R GDR+I+VKLV+G+ +
Sbjct: 130  KGQKAKEVEGTGFKLWYTGTATNKNGVGVLIDKSLKDGVVDVKRVGDRIIIVKLVIGDLV 189

Query: 1379 INIISAYAPQVGLDEFTKVQFWEQMDELIQEIPASEKIYIGGDFNGHVGEDRLGYEMVHG 1558
            +N+ISAYAPQVGL+E +K +FWE ++++I  +P  EK++IGGD NGHVG   + +E VHG
Sbjct: 190  LNVISAYAPQVGLNENSKREFWEGLEDMISSVPVGEKLFIGGDLNGHVGTSSISFEGVHG 249

Query: 1559 GYGIGDRNDLGESILDFAMAYGLVLVNTYFKKRFEHLITFKSGTNKSQIDFFITRKGDRL 1738
            G+G G RN  GE IL+FA+AY + + NT+F+KR  HL+TF SG + SQIDF + RK DR 
Sbjct: 250  GFGFGTRNQEGEEILNFALAYDMFIANTFFRKRTSHLVTFSSGQHTSQIDFVLLRKEDRH 309

Query: 1739 TCKDCKVIPGESLTTQHRIMVMDIKIKKQYRARKEKINPRTKWWNLKGEKLELFKNKILK 1918
             C DCKVIPGE + TQH+++V + + K + +  K     RTKWW LKG+  + FK ++++
Sbjct: 310  ACLDCKVIPGECVVTQHKLVVANFRFKIRLQRNKHNKVTRTKWWKLKGDVAQTFKERVIE 369

Query: 1919 EAPWNIEDETNTMWNKMAACIRGVSKEILGESKGRGPQFKETWWWNEEVQNVVKNKRECF 2098
            E PW  E ++N MW KMA CIR ++ E  G S+G   + K+TWWWNE+VQ  +K K++C+
Sbjct: 370  EGPWAEEGDSNIMWRKMAMCIRKIASEEFGLSQGNRREVKDTWWWNEDVQKAIKEKKDCY 429

Query: 2099 KTWQQTRSKESFEXXXXXXXXXXXMVSEAKSKAYDDLYTKLGTLEGEKIIYKIAKLRDRK 2278
            K     +  E+ E            VS A+ +A+D+LY +L T +GEK IY++AK+R+RK
Sbjct: 430  KRLHHDKCAENIEKYRIAKKSAKRAVSRARGQAFDNLYQRLDTKQGEKDIYRMAKIRERK 489

Query: 2279 TKDLHSIKCIKSEDSRVLVKDEEIKERWKSYFEKLLNEEN-GDRQNMEEPREIRPNTFFR 2455
            T+D++ +KCIK E +++LVK+EEIK RWK YF KL N  N      ++EP +     F R
Sbjct: 490  TRDVNQVKCIKDEANQLLVKNEEIKNRWKEYFNKLFNGGNESSTIELDEPFDDNNRGFVR 549

Query: 2456 RIRTSEVRAALKKMKPGRALGPDGIPIEVWKCLGEAGVSWITKMFNKIIMTKRMPDEWRK 2635
            RI+  EV+ ALK+MK G+A+GPDGIPIEVW+CLG+  + W+TK+FN I  T RMPDEW++
Sbjct: 550  RIQEYEVKEALKRMKVGKAMGPDGIPIEVWRCLGDIAIVWLTKLFNTIFRTNRMPDEWQR 609

Query: 2636 SVLVPIYKNKGDIQCCSNYRGIKLMSHTMKLWERVIEHRLRMETNVSENQFGFMPGRSTT 2815
            S LVPI+KNKGD+Q C+NYRGIKLMSHTMKLWERVIEHRLR  T+V++NQFGFMPGRST 
Sbjct: 610  STLVPIFKNKGDVQSCTNYRGIKLMSHTMKLWERVIEHRLRKLTSVTQNQFGFMPGRSTM 669

Query: 2816 EAI 2824
            EAI
Sbjct: 670  EAI 672


>AQK78701.1 Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
          Length = 1016

 Score =  724 bits (1869), Expect = 0.0
 Identities = 343/639 (53%), Positives = 462/639 (72%), Gaps = 10/639 (1%)
 Frame = +2

Query: 938  PLSDA--LRLPPGVSKNRQG------ASHRRPGAMINEQGFLHQSGRVR-VKKQVQDSSL 1090
            PLSDA  L L P +S+   G      A HRRPG + NEQG LH   RVR V+K V+ + +
Sbjct: 12   PLSDAPSLDLEPVISEQGSGRRILSGALHRRPGVVENEQGSLHLPRRVRRVRKLVEPTRV 71

Query: 1091 RLATWNIGTLSGKGMELVDTMLRRKVNIACLQETKWVGEKAREIENTGFKIFYTGKHRHR 1270
            R+ +WN+G+L+GK  E+VD  +RR VNI C+QETKW G+KA+E+E TGFK++YTG   ++
Sbjct: 72   RVGSWNVGSLTGKLREIVDVAVRRLVNILCVQETKWKGQKAKEVEGTGFKLWYTGTATNK 131

Query: 1271 NGVGIVVDKNLKNDIVTVIRRGDRLILVKLVLGENIINIISAYAPQVGLDEFTKVQFWEQ 1450
            NGVG+++DK+LK+ +V V R GDR+ILVKLV+G+ ++N+ISAYAPQVGL+E +K +FWE 
Sbjct: 132  NGVGVLIDKSLKDGVVDVKRVGDRIILVKLVIGDLVLNVISAYAPQVGLNENSKREFWEG 191

Query: 1451 MDELIQEIPASEKIYIGGDFNGHVGEDRLGYEMVHGGYGIGDRNDLGESILDFAMAYGLV 1630
            +++++  +P  EK++IGGD NGHVG     +E VHGG+G G RN  GE IL+FA+AY + 
Sbjct: 192  LEDMVSSVPVGEKLFIGGDLNGHVGTSSTSFEGVHGGFGFGTRNQEGEEILNFALAYDMF 251

Query: 1631 LVNTYFKKRFEHLITFKSGTNKSQIDFFITRKGDRLTCKDCKVIPGESLTTQHRIMVMDI 1810
            L NT+F+KR  HL+TF SG + SQIDF + RK DR  C DCKVIPGE + +QH+++V D 
Sbjct: 252  LANTFFRKRTSHLVTFSSGQHTSQIDFVLLRKEDRHACLDCKVIPGECVVSQHKLVVADF 311

Query: 1811 KIKKQYRARKEKINPRTKWWNLKGEKLELFKNKILKEAPWNIEDETNTMWNKMAACIRGV 1990
            + K + +  K     RTKWW LKG+  + FK +I++E PW  E +TN MW KMA CIR +
Sbjct: 312  RFKIRLQRNKHNKVTRTKWWKLKGDVAQTFKERIIEEGPWAEEGDTNIMWRKMAVCIRKI 371

Query: 1991 SKEILGESKGRGPQFKETWWWNEEVQNVVKNKRECFKTWQQTRSKESFEXXXXXXXXXXX 2170
            + E +G S+G   + K+TWWWNE+VQ  +K K++C+K     +  E+ E           
Sbjct: 372  ASEEVGLSQGNRREVKDTWWWNEDVQKAIKEKKDCYKRLHHDKCAENIEKYRIAKKSAKR 431

Query: 2171 MVSEAKSKAYDDLYTKLGTLEGEKIIYKIAKLRDRKTKDLHSIKCIKSEDSRVLVKDEEI 2350
             VS A+ +A+D+LY +L T +GEK IY++AK+R+RKT+D++ +KCIK E +++LVK+EEI
Sbjct: 432  AVSRARGQAFDNLYQRLDTKQGEKDIYRMAKIRERKTRDVNQVKCIKDEANQLLVKNEEI 491

Query: 2351 KERWKSYFEKLLNEEN-GDRQNMEEPREIRPNTFFRRIRTSEVRAALKKMKPGRALGPDG 2527
            K RWK YF KL N  N      ++EP +     F RRI+  EV+ ALK+MK G+A+GPDG
Sbjct: 492  KNRWKEYFNKLFNGGNESSTIELDEPFDDNNRGFVRRIQEYEVKEALKRMKVGKAMGPDG 551

Query: 2528 IPIEVWKCLGEAGVSWITKMFNKIIMTKRMPDEWRKSVLVPIYKNKGDIQCCSNYRGIKL 2707
            IPIEVW+CLG+  + W+TK+FN I  T RMPDEWR+S LVPI+KNKGD+Q C+NYRGIKL
Sbjct: 552  IPIEVWRCLGDIAIVWLTKLFNTIFRTNRMPDEWRRSTLVPIFKNKGDVQSCTNYRGIKL 611

Query: 2708 MSHTMKLWERVIEHRLRMETNVSENQFGFMPGRSTTEAI 2824
            MSHTMKLWERVIEHRLR  T V++NQFGFMPGRST EAI
Sbjct: 612  MSHTMKLWERVIEHRLRKMTCVTQNQFGFMPGRSTMEAI 650


>ONM52836.1 Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
          Length = 1016

 Score =  724 bits (1868), Expect = 0.0
 Identities = 340/639 (53%), Positives = 463/639 (72%), Gaps = 10/639 (1%)
 Frame = +2

Query: 938  PLSDA--LRLPPGVSKNRQG------ASHRRPGAMINEQGFLHQSGRVR-VKKQVQDSSL 1090
            PLSDA  L L P +++   G      A HRRPG + NEQG LH   RVR V+K V+ + +
Sbjct: 12   PLSDAPSLDLEPVINEQGSGRRILSGALHRRPGVVENEQGSLHLPRRVRRVRKLVEPTRV 71

Query: 1091 RLATWNIGTLSGKGMELVDTMLRRKVNIACLQETKWVGEKAREIENTGFKIFYTGKHRHR 1270
            R+ +WN+G+L+GK  E+VD  +RR+VNI C+QETKW G+KA+E+E TGFK++YTG   ++
Sbjct: 72   RVGSWNVGSLTGKLREIVDVAVRRRVNILCVQETKWKGQKAKEVEGTGFKLWYTGTATNK 131

Query: 1271 NGVGIVVDKNLKNDIVTVIRRGDRLILVKLVLGENIINIISAYAPQVGLDEFTKVQFWEQ 1450
            NGVG+++DK+LK+ +V V R GDR+ILVKLV+G+ ++N+ISAYAPQVGL+E +K +FWE 
Sbjct: 132  NGVGVLIDKSLKDGVVDVKRVGDRIILVKLVIGDLVLNVISAYAPQVGLNENSKREFWEG 191

Query: 1451 MDELIQEIPASEKIYIGGDFNGHVGEDRLGYEMVHGGYGIGDRNDLGESILDFAMAYGLV 1630
            +++++  +P  EK++IGGD NGHVG     +E VHGG+G G RN  GE IL+FA+AY + 
Sbjct: 192  LEDMVSSVPVGEKLFIGGDLNGHVGTSSTSFEGVHGGFGFGTRNQEGEEILNFALAYDMF 251

Query: 1631 LVNTYFKKRFEHLITFKSGTNKSQIDFFITRKGDRLTCKDCKVIPGESLTTQHRIMVMDI 1810
            + NT+F+KR  HL+TF SG + SQIDF + RK DR  C DCKVIPGE + TQH+++V D 
Sbjct: 252  IANTFFRKRTSHLVTFSSGQHTSQIDFVLLRKEDRHACLDCKVIPGECVVTQHKLVVADF 311

Query: 1811 KIKKQYRARKEKINPRTKWWNLKGEKLELFKNKILKEAPWNIEDETNTMWNKMAACIRGV 1990
            + K + +  K     RTKWW LKG+  + FK ++++E PW  E ++N MW KMA CIR +
Sbjct: 312  RFKIRLQRNKHNKVTRTKWWKLKGDVAQTFKERVIEEGPWAEEGDSNIMWRKMAMCIRKI 371

Query: 1991 SKEILGESKGRGPQFKETWWWNEEVQNVVKNKRECFKTWQQTRSKESFEXXXXXXXXXXX 2170
            + E  G S+G   + K+TWWWNE+VQ  +K K++C+K     +  E+ E           
Sbjct: 372  ASEEFGLSQGNRREVKDTWWWNEDVQKAIKEKKDCYKRLHHDKCAENIEKYRIAKKSAKR 431

Query: 2171 MVSEAKSKAYDDLYTKLGTLEGEKIIYKIAKLRDRKTKDLHSIKCIKSEDSRVLVKDEEI 2350
             VS A+ +A+D+LY +L T +GEK IY++AK+R+RKT+D++ +KCIK E +++LVK+EEI
Sbjct: 432  AVSRARGQAFDNLYQRLDTKQGEKDIYRMAKIRERKTRDVNQVKCIKDEANQLLVKNEEI 491

Query: 2351 KERWKSYFEKLLNEEN-GDRQNMEEPREIRPNTFFRRIRTSEVRAALKKMKPGRALGPDG 2527
            K RWK YF KL N  N      ++EP +     F RRI+  EV+ ALK+MK G+A+GPDG
Sbjct: 492  KNRWKEYFNKLFNGGNESSTIELDEPFDDNNRGFVRRIQEYEVKEALKRMKVGKAMGPDG 551

Query: 2528 IPIEVWKCLGEAGVSWITKMFNKIIMTKRMPDEWRKSVLVPIYKNKGDIQCCSNYRGIKL 2707
            IPIEVW+CLG+  + W+TK+FN I  T RMPDEWR+S LVPI+KNKGD+Q C+NYRGIKL
Sbjct: 552  IPIEVWRCLGDIAIVWLTKLFNTIFRTNRMPDEWRRSTLVPIFKNKGDVQSCTNYRGIKL 611

Query: 2708 MSHTMKLWERVIEHRLRMETNVSENQFGFMPGRSTTEAI 2824
            MSHTMKLWERVIEHRLR  T+V++NQFGFMPGRST EAI
Sbjct: 612  MSHTMKLWERVIEHRLRKLTSVTQNQFGFMPGRSTMEAI 650


>ONL92524.1 Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
          Length = 1016

 Score =  724 bits (1868), Expect = 0.0
 Identities = 341/639 (53%), Positives = 461/639 (72%), Gaps = 10/639 (1%)
 Frame = +2

Query: 938  PLSDA--LRLPPGVSKNRQG------ASHRRPGAMINEQGFLHQSGRV-RVKKQVQDSSL 1090
            PLSDA  L L P +S+   G      A HRRPG + NEQG LH   RV RV+K V+ + +
Sbjct: 12   PLSDAPSLDLEPVISEQGSGRCILSGALHRRPGVVENEQGSLHLPRRVQRVRKLVEPTRV 71

Query: 1091 RLATWNIGTLSGKGMELVDTMLRRKVNIACLQETKWVGEKAREIENTGFKIFYTGKHRHR 1270
            R+ +WNIG+L+GK  E+VD  +RR+VNI C+QETKW G+KA+E+E TGFK++YTG   ++
Sbjct: 72   RVGSWNIGSLTGKLREIVDVAVRRRVNILCVQETKWKGQKAKEVEGTGFKLWYTGTATNK 131

Query: 1271 NGVGIVVDKNLKNDIVTVIRRGDRLILVKLVLGENIINIISAYAPQVGLDEFTKVQFWEQ 1450
            NGVG+++DK+LK+ +V V R GDR+ILVKLV+G+ ++N+ISAYAPQVGL+E +K +FWE 
Sbjct: 132  NGVGVLIDKSLKDGVVDVKRVGDRIILVKLVIGDLVLNVISAYAPQVGLNENSKREFWEG 191

Query: 1451 MDELIQEIPASEKIYIGGDFNGHVGEDRLGYEMVHGGYGIGDRNDLGESILDFAMAYGLV 1630
            +++++  +P  EK++IGGD NGHVG     +E VHGG+G G RN  GE IL+FA+AY + 
Sbjct: 192  LEDMVSSVPVGEKLFIGGDLNGHVGTSSTSFEGVHGGFGFGTRNQEGEEILNFALAYDMF 251

Query: 1631 LVNTYFKKRFEHLITFKSGTNKSQIDFFITRKGDRLTCKDCKVIPGESLTTQHRIMVMDI 1810
            + NT+F+KR  HL+TF SG + SQIDF + RK DR  C DCKVIPGE + TQH+++V D 
Sbjct: 252  IANTFFRKRTSHLVTFSSGQHTSQIDFVLLRKEDRHACLDCKVIPGECVVTQHKLVVADF 311

Query: 1811 KIKKQYRARKEKINPRTKWWNLKGEKLELFKNKILKEAPWNIEDETNTMWNKMAACIRGV 1990
            + K + +  K     RTKWW LKG+  + FK ++++E PW  E + N MW KM  CIR +
Sbjct: 312  RFKIRLQRNKHNKVTRTKWWKLKGDVAQTFKERVIEEGPWAEEGDINIMWRKMVVCIRKI 371

Query: 1991 SKEILGESKGRGPQFKETWWWNEEVQNVVKNKRECFKTWQQTRSKESFEXXXXXXXXXXX 2170
            + E  G S+G   + K+TWWWNE+VQ  +K K++C+K     +  E+ E           
Sbjct: 372  ASEEFGLSQGNRREVKDTWWWNEDVQKAIKEKKDCYKRLHHDKCAENIEKYRIAKKSAKQ 431

Query: 2171 MVSEAKSKAYDDLYTKLGTLEGEKIIYKIAKLRDRKTKDLHSIKCIKSEDSRVLVKDEEI 2350
             VS A+ +A+D+LY +L T +GEK IY++AK+R+RKT+D++ +KCIK E +++LVK+EEI
Sbjct: 432  AVSRARGQAFDNLYQRLDTKQGEKDIYRMAKIRERKTRDVNQVKCIKDEANQLLVKNEEI 491

Query: 2351 KERWKSYFEKLLNEEN-GDRQNMEEPREIRPNTFFRRIRTSEVRAALKKMKPGRALGPDG 2527
            K RWK YF KL N  N      ++EP +     F RRI+  EV+ ALK+MK G+A+GPDG
Sbjct: 492  KNRWKEYFNKLFNGGNESSTIELDEPFDDNNRGFVRRIQEYEVKEALKRMKVGKAMGPDG 551

Query: 2528 IPIEVWKCLGEAGVSWITKMFNKIIMTKRMPDEWRKSVLVPIYKNKGDIQCCSNYRGIKL 2707
            IPIEVW+CLG+  + W+TK+FN I  T RMPDEWR+S LVPI+KNKGD+Q C+NYRGIKL
Sbjct: 552  IPIEVWRCLGDIAIVWLTKLFNTIFRTNRMPDEWRRSTLVPIFKNKGDVQSCTNYRGIKL 611

Query: 2708 MSHTMKLWERVIEHRLRMETNVSENQFGFMPGRSTTEAI 2824
            MSHTMKLWERVIEHRLR  T+V++NQFGFMPGRST EAI
Sbjct: 612  MSHTMKLWERVIEHRLRKMTSVTQNQFGFMPGRSTMEAI 650


>AQK43109.1 Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
          Length = 917

 Score =  720 bits (1858), Expect = 0.0
 Identities = 345/663 (52%), Positives = 470/663 (70%), Gaps = 12/663 (1%)
 Frame = +2

Query: 872  RKTLSDFYDMNP--IITHTDARAFPLSDA--LRLPPGVSKNRQG------ASHRRPGAMI 1021
            R  LSD    NP  ++        PLSDA  L L P +++   G      A HRRPG + 
Sbjct: 10   RNPLSDAPYRNPGMVLNEQGPGRHPLSDAPSLDLEPVINEQGSGRRILSGALHRRPGVVE 69

Query: 1022 NEQGFLHQSGRVR-VKKQVQDSSLRLATWNIGTLSGKGMELVDTMLRRKVNIACLQETKW 1198
            NEQG LH   RVR V+K V+ + +R+ +WN+G+L+GK  E+VD  +RR+VNI C+QETKW
Sbjct: 70   NEQGSLHLPRRVRRVRKLVEPTRVRVGSWNVGSLTGKLREIVDVAVRRRVNILCVQETKW 129

Query: 1199 VGEKAREIENTGFKIFYTGKHRHRNGVGIVVDKNLKNDIVTVIRRGDRLILVKLVLGENI 1378
             G+KA+E+E TGFK++YTG   ++NGVG+++DK+LK+ +V V R GDR+ILVKLV+G+ +
Sbjct: 130  KGQKAKEVEGTGFKLWYTGTATNKNGVGVLIDKSLKDGVVDVKRVGDRIILVKLVIGDLV 189

Query: 1379 INIISAYAPQVGLDEFTKVQFWEQMDELIQEIPASEKIYIGGDFNGHVGEDRLGYEMVHG 1558
            +N+ISAYAPQVGL+E +K +FWE +++++  +P  EK++IG D NGHVG     +E VHG
Sbjct: 190  LNVISAYAPQVGLNENSKREFWEGLEDMVSSVPVGEKLFIG-DLNGHVGTSSTSFEGVHG 248

Query: 1559 GYGIGDRNDLGESILDFAMAYGLVLVNTYFKKRFEHLITFKSGTNKSQIDFFITRKGDRL 1738
            G+G G RN  GE IL+FA+AY + + NT+F+KR  HL+TF SG + SQIDF + RK DR 
Sbjct: 249  GFGFGTRNQEGEEILNFALAYDMFIANTFFRKRTSHLVTFSSGQHTSQIDFVLLRKEDRH 308

Query: 1739 TCKDCKVIPGESLTTQHRIMVMDIKIKKQYRARKEKINPRTKWWNLKGEKLELFKNKILK 1918
             C DCKVIPGE + TQH+++V D + K + +  K     RTKWW LKG+  + FK ++++
Sbjct: 309  ACLDCKVIPGECVVTQHKLVVADFRFKIRLQRNKHNKVTRTKWWKLKGDVAQTFKERVIE 368

Query: 1919 EAPWNIEDETNTMWNKMAACIRGVSKEILGESKGRGPQFKETWWWNEEVQNVVKNKRECF 2098
            E PW  E ++N MW KMA CIR ++ E  G S+G   + K+TWWWNE+VQ  +K K++C+
Sbjct: 369  EGPWAEEGDSNIMWRKMAMCIRKIASEEFGLSQGNRREVKDTWWWNEDVQKAIKEKKDCY 428

Query: 2099 KTWQQTRSKESFEXXXXXXXXXXXMVSEAKSKAYDDLYTKLGTLEGEKIIYKIAKLRDRK 2278
            K     +  E+ E            VS A+ +A+D+LY +L T +GEK IY++AK+R+RK
Sbjct: 429  KRLHHDKCAENIEKYRIAKKSAKRAVSRARGQAFDNLYQRLDTKQGEKDIYRMAKIRERK 488

Query: 2279 TKDLHSIKCIKSEDSRVLVKDEEIKERWKSYFEKLLNEEN-GDRQNMEEPREIRPNTFFR 2455
            T+D++ +KCIK E +++LVK+EEIK RWK YF KL N  N      ++EP +     F R
Sbjct: 489  TRDVNQVKCIKDEANQLLVKNEEIKNRWKEYFNKLFNGGNESSTIELDEPFDDNNRGFVR 548

Query: 2456 RIRTSEVRAALKKMKPGRALGPDGIPIEVWKCLGEAGVSWITKMFNKIIMTKRMPDEWRK 2635
            RI+  EV+ ALK+MK G+A+GPDGIPIEVW+CLG+  + W+TK+FN I  T RMPDEWR+
Sbjct: 549  RIQEYEVKEALKRMKVGKAMGPDGIPIEVWRCLGDIAIVWLTKLFNTIFQTNRMPDEWRR 608

Query: 2636 SVLVPIYKNKGDIQCCSNYRGIKLMSHTMKLWERVIEHRLRMETNVSENQFGFMPGRSTT 2815
            S LVPI+KNKGD+Q C+NYRGIKLMSHTMKLWERVIEHRLR  T+V++NQFGFMPGRST 
Sbjct: 609  STLVPIFKNKGDVQSCTNYRGIKLMSHTMKLWERVIEHRLRKLTSVTQNQFGFMPGRSTM 668

Query: 2816 EAI 2824
            EAI
Sbjct: 669  EAI 671


>AQK49513.1 Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
          Length = 801

 Score =  715 bits (1845), Expect = 0.0
 Identities = 339/663 (51%), Positives = 469/663 (70%), Gaps = 12/663 (1%)
 Frame = +2

Query: 872  RKTLSD--FYDMNPIITHTDARAFPLSDALRLP--PGVSKNRQG------ASHRRPGAMI 1021
            R  LSD  + +   ++    +   PLSDAL L   P +S+   G      A H+RPG + 
Sbjct: 12   RNPLSDAPYRNSGMVLNEQGSGRHPLSDALSLDLEPVISEQGSGRRILSGALHQRPGVVE 71

Query: 1022 NEQGFLHQSGRVR-VKKQVQDSSLRLATWNIGTLSGKGMELVDTMLRRKVNIACLQETKW 1198
            NEQG LH   RVR V+K V+ + +R+ +WN+G+L+GK  E+VD  +RR+VNI C+QETKW
Sbjct: 72   NEQGSLHLPRRVRRVRKLVEPTRVRVGSWNVGSLTGKLREIVDVAVRRRVNILCIQETKW 131

Query: 1199 VGEKAREIENTGFKIFYTGKHRHRNGVGIVVDKNLKNDIVTVIRRGDRLILVKLVLGENI 1378
             G+KA+E+E TGFK++Y G   ++NGVG+++DK+LK+ +V V R GDR+ILVKLV+G+ +
Sbjct: 132  KGQKAKEVEGTGFKLWYMGTAPNKNGVGVLIDKSLKDGVVDVKRVGDRIILVKLVIGDLV 191

Query: 1379 INIISAYAPQVGLDEFTKVQFWEQMDELIQEIPASEKIYIGGDFNGHVGEDRLGYEMVHG 1558
            +N+ISAYAPQVGL+E +K +FWE +++++  +P  EK++IGGD NGHVG     +E VHG
Sbjct: 192  LNVISAYAPQVGLNENSKREFWEGLEDMVSSVPVGEKLFIGGDLNGHVGISSTSFEGVHG 251

Query: 1559 GYGIGDRNDLGESILDFAMAYGLVLVNTYFKKRFEHLITFKSGTNKSQIDFFITRKGDRL 1738
            G+  G RN  GE IL+FA+AY + + NT+F+KR  HL+TF SG + SQIDF + RK DR 
Sbjct: 252  GFDFGTRNQEGEEILNFALAYDMFIANTFFRKRTSHLVTFSSGQHTSQIDFVLLRKEDRH 311

Query: 1739 TCKDCKVIPGESLTTQHRIMVMDIKIKKQYRARKEKINPRTKWWNLKGEKLELFKNKILK 1918
             C DCKV+PGE + TQH+++V D ++K + +  K     RTKWW LKG+  + FK ++++
Sbjct: 312  ACLDCKVLPGECVVTQHKLVVADFRLKIRLQRNKHNKVTRTKWWKLKGDVAQTFKERVIE 371

Query: 1919 EAPWNIEDETNTMWNKMAACIRGVSKEILGESKGRGPQFKETWWWNEEVQNVVKNKRECF 2098
            E PW  E + N MW KMA CIR ++ E  G S+G   + K+TWWWNE+VQ  +K K++C+
Sbjct: 372  EGPWAEEGDINIMWRKMAVCIRKIASEEFGLSQGNRREVKDTWWWNEDVQKAIKEKKDCY 431

Query: 2099 KTWQQTRSKESFEXXXXXXXXXXXMVSEAKSKAYDDLYTKLGTLEGEKIIYKIAKLRDRK 2278
            K     +  E+ E            VS A+ +A+D+LY +L T +GEK IY++AK+R+RK
Sbjct: 432  KCLHHDKCAENIEKYRIAKKSAKRAVSRARGQAFDNLYQRLDTKQGEKDIYRMAKIRERK 491

Query: 2279 TKDLHSIKCIKSEDSRVLVKDEEIKERWKSYFEKLLNEEN-GDRQNMEEPREIRPNTFFR 2455
            T+D++ +KCIK + +++LVK+EEIK  WK YF KL N  N      ++EP +     F R
Sbjct: 492  TRDVNQVKCIKDKANQLLVKNEEIKNIWKEYFNKLFNGGNESSTIELDEPFDDNNRGFVR 551

Query: 2456 RIRTSEVRAALKKMKPGRALGPDGIPIEVWKCLGEAGVSWITKMFNKIIMTKRMPDEWRK 2635
            RI+  EV+ ALK+MK G+A+GPDGIPIEVW+CLG+  + W+TK+FN I  T RMPDEWR+
Sbjct: 552  RIQEYEVKEALKRMKVGKAMGPDGIPIEVWRCLGDIAIVWLTKLFNTIFRTNRMPDEWRR 611

Query: 2636 SVLVPIYKNKGDIQCCSNYRGIKLMSHTMKLWERVIEHRLRMETNVSENQFGFMPGRSTT 2815
            S LVPI+KNKGD+Q C+NYRGIKLMSHTMKLWERVIEHRLR  T+V++NQFGFMPGRST 
Sbjct: 612  STLVPIFKNKGDVQSCTNYRGIKLMSHTMKLWERVIEHRLRKMTSVTQNQFGFMPGRSTM 671

Query: 2816 EAI 2824
            EAI
Sbjct: 672  EAI 674


>ONM54584.1 Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
          Length = 1016

 Score =  723 bits (1865), Expect = 0.0
 Identities = 341/639 (53%), Positives = 459/639 (71%), Gaps = 10/639 (1%)
 Frame = +2

Query: 938  PLSDALRLP--PGVSKNRQG------ASHRRPGAMINEQGFLHQSGRVR-VKKQVQDSSL 1090
            P SDAL L   P +S+   G      A HRRPG + NEQG LH   RVR V+K V+ + +
Sbjct: 12   PSSDALPLDLEPVISEQGSGRRILSGALHRRPGVVKNEQGSLHLPRRVRRVRKLVEPTRV 71

Query: 1091 RLATWNIGTLSGKGMELVDTMLRRKVNIACLQETKWVGEKAREIENTGFKIFYTGKHRHR 1270
            R+ +WN+G+L+GK  E+VD  +RR+VNI C+QETKW G+KA+E+E TGFK++YTG   ++
Sbjct: 72   RVGSWNVGSLTGKLREIVDVAVRRRVNILCVQETKWKGQKAKEVEGTGFKLWYTGTATNK 131

Query: 1271 NGVGIVVDKNLKNDIVTVIRRGDRLILVKLVLGENIINIISAYAPQVGLDEFTKVQFWEQ 1450
            NGVG+++DK+LK+ +V V R GDR+ILVKLV+G+ ++N+ISAYAPQVGL+E +K +FWE 
Sbjct: 132  NGVGVLIDKSLKDGVVDVKRVGDRIILVKLVIGDLVLNVISAYAPQVGLNENSKREFWEG 191

Query: 1451 MDELIQEIPASEKIYIGGDFNGHVGEDRLGYEMVHGGYGIGDRNDLGESILDFAMAYGLV 1630
            +++++  +P  EK++IGGD NGHVG     +E VHGG+G G RN  GE IL+FA+AY + 
Sbjct: 192  LEDMVSSVPVGEKLFIGGDLNGHVGTSSTSFEGVHGGFGFGTRNQEGEEILNFALAYDMF 251

Query: 1631 LVNTYFKKRFEHLITFKSGTNKSQIDFFITRKGDRLTCKDCKVIPGESLTTQHRIMVMDI 1810
            + NT+FKKR  HL+TF SG + SQIDF + RK DR  C DCKVIPGE + TQH+++V D 
Sbjct: 252  IANTFFKKRQSHLVTFSSGQHTSQIDFVLLRKEDRHACLDCKVIPGECVVTQHKLVVADF 311

Query: 1811 KIKKQYRARKEKINPRTKWWNLKGEKLELFKNKILKEAPWNIEDETNTMWNKMAACIRGV 1990
            + K + +  K     RTKWW LKG+  + FK ++++E PW  E++ N MW KMA CIR +
Sbjct: 312  RFKIRLQRNKHNKVTRTKWWKLKGDVAQTFKKRVIEEGPWAGEEDANIMWRKMATCIRKI 371

Query: 1991 SKEILGESKGRGPQFKETWWWNEEVQNVVKNKRECFKTWQQTRSKESFEXXXXXXXXXXX 2170
            + E  G S+G   + K+TWWWNE+VQ  +K K++C+K     +  E+ E           
Sbjct: 372  ASEEFGLSQGNRREVKDTWWWNEDVQKAIKEKKDCYKRLHHDKCAENIEKYRIAKKSAKR 431

Query: 2171 MVSEAKSKAYDDLYTKLGTLEGEKIIYKIAKLRDRKTKDLHSIKCIKSEDSRVLVKDEEI 2350
             VS A+ +AYDDLY +L T +GEK IY++AK+R+RKT+D++ +KCIK E +++LVK EEI
Sbjct: 432  AVSRARGQAYDDLYQRLDTKQGEKDIYRMAKIRERKTRDVNQVKCIKDEANQLLVKSEEI 491

Query: 2351 KERWKSYFEKLLNEENGDRQ-NMEEPREIRPNTFFRRIRTSEVRAALKKMKPGRALGPDG 2527
            K RWK YF KL N  N      ++EP +     F RRI+  EV+ ALK+MK G+A+GPDG
Sbjct: 492  KNRWKEYFNKLFNGGNESATIELDEPFDDNNRGFVRRIQEYEVKEALKRMKVGKAMGPDG 551

Query: 2528 IPIEVWKCLGEAGVSWITKMFNKIIMTKRMPDEWRKSVLVPIYKNKGDIQCCSNYRGIKL 2707
            IPIEVW+CLG+  + W+TK+FN I    RMPDEWR+S LVPI+KNKGD+Q C+NYRGIKL
Sbjct: 552  IPIEVWRCLGDIAIVWLTKLFNTIFRANRMPDEWRRSTLVPIFKNKGDVQSCTNYRGIKL 611

Query: 2708 MSHTMKLWERVIEHRLRMETNVSENQFGFMPGRSTTEAI 2824
            MSHTMKLWE VIEHRLR  T+V++NQFGFMPGRST EAI
Sbjct: 612  MSHTMKLWEIVIEHRLRKMTSVTQNQFGFMPGRSTMEAI 650


>AQK92036.1 Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
          Length = 1016

 Score =  722 bits (1864), Expect = 0.0
 Identities = 341/639 (53%), Positives = 458/639 (71%), Gaps = 10/639 (1%)
 Frame = +2

Query: 938  PLSDALRLP--PGVSKNRQG------ASHRRPGAMINEQGFLHQSGRVR-VKKQVQDSSL 1090
            P SDAL L   P +S+   G      A HRRPG + NEQG LH   RVR V+K V+ + +
Sbjct: 12   PSSDALSLDLEPVISEQGSGRRILSGALHRRPGVVKNEQGSLHLPRRVRRVRKLVEPTRV 71

Query: 1091 RLATWNIGTLSGKGMELVDTMLRRKVNIACLQETKWVGEKAREIENTGFKIFYTGKHRHR 1270
            R+ +WN+G+L+GK  E+VD  +RR+VNI C+QETKW G+KA+E+E TGFK++YTG   ++
Sbjct: 72   RVGSWNVGSLTGKLREIVDVAVRRRVNILCVQETKWKGQKAKEVEGTGFKLWYTGTATNK 131

Query: 1271 NGVGIVVDKNLKNDIVTVIRRGDRLILVKLVLGENIINIISAYAPQVGLDEFTKVQFWEQ 1450
            NGVG+++DK+LK+ +V V R GDR+ILVKLV+G+ ++N+ISAYAPQVGL+E +K +FWE 
Sbjct: 132  NGVGVLIDKSLKDGVVDVKRVGDRIILVKLVIGDLVLNVISAYAPQVGLNENSKREFWEG 191

Query: 1451 MDELIQEIPASEKIYIGGDFNGHVGEDRLGYEMVHGGYGIGDRNDLGESILDFAMAYGLV 1630
            +++++  +P  EK++IGGD NGHVG     +E VHGG+G G RN  GE IL+FA+AY + 
Sbjct: 192  LEDMVTSVPVGEKLFIGGDLNGHVGTSSTSFEGVHGGFGFGTRNQEGEEILNFALAYDMF 251

Query: 1631 LVNTYFKKRFEHLITFKSGTNKSQIDFFITRKGDRLTCKDCKVIPGESLTTQHRIMVMDI 1810
            + NT+FKKR  HL+TF SG + SQIDF + RK D   C DCKVIPGE + TQH+++V D 
Sbjct: 252  IANTFFKKRQSHLVTFSSGQHTSQIDFVLLRKEDMHACLDCKVIPGECVVTQHKLVVADF 311

Query: 1811 KIKKQYRARKEKINPRTKWWNLKGEKLELFKNKILKEAPWNIEDETNTMWNKMAACIRGV 1990
            + K + +  K     RTKWW LKG+  + FK ++++E PW  E + N MW KMA CIR +
Sbjct: 312  RFKIRLQRNKHNKVTRTKWWKLKGDVAQTFKERVIEEGPWAGEGDANIMWRKMATCIRKI 371

Query: 1991 SKEILGESKGRGPQFKETWWWNEEVQNVVKNKRECFKTWQQTRSKESFEXXXXXXXXXXX 2170
            + E  G S+G   + K+TWWWNE+VQ  +K K++C+K     +  E+ E           
Sbjct: 372  ASEEFGLSQGNRREVKDTWWWNEDVQKAIKEKKDCYKRLHHDKCAENIEKYRIAKKSAKR 431

Query: 2171 MVSEAKSKAYDDLYTKLGTLEGEKIIYKIAKLRDRKTKDLHSIKCIKSEDSRVLVKDEEI 2350
             VS A+ +AYDDLY +L T +GEK IY++AK+R+RKT+D++ +KCIK E +++LVK EEI
Sbjct: 432  AVSRARGQAYDDLYQRLDTKQGEKDIYRMAKIRERKTRDVNQVKCIKDEANQLLVKSEEI 491

Query: 2351 KERWKSYFEKLLNEENGDRQ-NMEEPREIRPNTFFRRIRTSEVRAALKKMKPGRALGPDG 2527
            K RWK YF KL N  N      ++EP +     F RRI+  EV+ ALK+MK G+A+GPDG
Sbjct: 492  KNRWKEYFNKLFNGGNESATIELDEPFDDNNRGFVRRIQKYEVKEALKRMKVGKAMGPDG 551

Query: 2528 IPIEVWKCLGEAGVSWITKMFNKIIMTKRMPDEWRKSVLVPIYKNKGDIQCCSNYRGIKL 2707
            IPIEVW+CLG+  + W+TK+FN I    RMPDEWR+S LVPI+KNKGD+Q C+NYRGIKL
Sbjct: 552  IPIEVWRCLGDIAIVWLTKLFNTIFRANRMPDEWRRSTLVPIFKNKGDVQSCTNYRGIKL 611

Query: 2708 MSHTMKLWERVIEHRLRMETNVSENQFGFMPGRSTTEAI 2824
            MSHTMKLWERVIEHRLR  T+V++NQFGFMPGRST EAI
Sbjct: 612  MSHTMKLWERVIEHRLRKMTSVTQNQFGFMPGRSTMEAI 650