BLASTX nr result
ID: Ephedra29_contig00001725
seq
BLASTX 2.2.26 [Sep-21-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Ephedra29_contig00001725 (2451 letters) Database: ./nr 115,041,592 sequences; 42,171,959,267 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ADE77788.1 unknown [Picea sitchensis] 402 e-131 XP_006472762.1 PREDICTED: general transcription factor IIH subun... 321 e-100 XP_002307429.2 basal transcription factor complex subunit-relate... 321 e-100 XP_010999370.1 PREDICTED: general transcription factor IIH subun... 321 e-100 XP_010273663.1 PREDICTED: RNA polymerase II transcription factor... 320 1e-99 KDO80684.1 hypothetical protein CISIN_1g022374mg [Citrus sinensis] 319 3e-99 XP_012078222.1 PREDICTED: general transcription factor IIH subun... 317 2e-98 XP_010999372.1 PREDICTED: general transcription factor IIH subun... 316 4e-98 CBI19033.3 unnamed protein product, partial [Vitis vinifera] 313 4e-97 XP_011101336.1 PREDICTED: general transcription factor IIH subun... 313 4e-97 XP_002284465.2 PREDICTED: RNA polymerase II transcription factor... 313 4e-97 OAY58252.1 hypothetical protein MANES_02G162200 [Manihot esculenta] 313 7e-97 XP_008219657.1 PREDICTED: RNA polymerase II transcription factor... 312 1e-96 XP_008391898.1 PREDICTED: RNA polymerase II transcription factor... 312 1e-96 XP_004152842.1 PREDICTED: general transcription factor IIH subun... 312 1e-96 XP_012078217.1 PREDICTED: general transcription factor IIH subun... 312 1e-96 XP_019250014.1 PREDICTED: RNA polymerase II transcription factor... 311 2e-96 XP_010999369.1 PREDICTED: general transcription factor IIH subun... 316 2e-96 XP_019250007.1 PREDICTED: RNA polymerase II transcription factor... 311 3e-96 XP_010675067.1 PREDICTED: RNA polymerase II transcription factor... 311 4e-96 >ADE77788.1 unknown [Picea sitchensis] Length = 306 Score = 402 bits (1034), Expect = e-131 Identities = 201/296 (67%), Positives = 227/296 (76%), Gaps = 6/296 (2%) Frame = -3 Query: 2314 MDSSAANAPQXXXXXXXXXXDTNPFFWGRQIDKNSQEPDASPLTFAQFLEHAFAFFNSIL 2135 M S+ +N PQ DTNPFFW AS LTF+QFLEH AFFNS+L Sbjct: 6 MASAGSNPPQDDVSLVVVLLDTNPFFWASATSSGQ----ASSLTFSQFLEHVLAFFNSLL 61 Query: 2134 LLHQLNHLVVIGTGMNTCEFIYDSTT------KVKELKGFNEFMTPSTLISQNLEEFVKK 1973 LLHQ+N LVVIGTG N+CEFIYDS+T K K+ K EF+TPST+I Q LE+FV++ Sbjct: 62 LLHQMNQLVVIGTGTNSCEFIYDSSTTNSEYKKSKDTKCSQEFLTPSTIIVQQLEDFVRR 121 Query: 1972 DHELYKNNTETKNMYXXXXXXXXXXLCYIQRVIRSTNPHPQPRILCLQGSPDGPQQHVGV 1793 D L NN TKN++ LCYIQR+IR HPQPRILCLQGSPDGPQQ+V + Sbjct: 122 DQALNTNNNATKNIHSLLSGSLSMALCYIQRIIRGGPSHPQPRILCLQGSPDGPQQYVAI 181 Query: 1792 MNAIFSAQRSMIPIDACIVGSEHSAFLQQASHITGGIYLKPQFVQGLFQFLAMVFATDLH 1613 MNAIFSAQRSM+P+D+CIVGS+HSAFLQQASHITGGIYLKPQ ++GLFQFLAMVFATDLH Sbjct: 182 MNAIFSAQRSMVPVDSCIVGSQHSAFLQQASHITGGIYLKPQQLEGLFQFLAMVFATDLH 241 Query: 1612 SRRFLQLPRPTGVDFRASCFCHKKAIDMGYVCSVCLSIFCEPLKKCSTCESVFNKQ 1445 SRRFLQLPRPTGVDFRASCFCHKK IDMGYVCSVCLSIFCE KKCSTCES FN++ Sbjct: 242 SRRFLQLPRPTGVDFRASCFCHKKTIDMGYVCSVCLSIFCEHSKKCSTCESTFNQK 297 >XP_006472762.1 PREDICTED: general transcription factor IIH subunit 3 isoform X1 [Citrus sinensis] Length = 298 Score = 321 bits (823), Expect = e-100 Identities = 156/268 (58%), Positives = 194/268 (72%) Frame = -3 Query: 2251 TNPFFWGRQIDKNSQEPDASPLTFAQFLEHAFAFFNSILLLHQLNHLVVIGTGMNTCEFI 2072 TNPFFW +S L+F+QFL H AFFN+IL L+QLN +VVI TG N+C+++ Sbjct: 22 TNPFFWS-----------SSSLSFSQFLTHVLAFFNAILTLNQLNQVVVIATGYNSCDYV 70 Query: 2071 YDSTTKVKELKGFNEFMTPSTLISQNLEEFVKKDHELYKNNTETKNMYXXXXXXXXXXLC 1892 YDS++ + G + + QNLEEF+ KD +L K E + LC Sbjct: 71 YDSSSTGNQSVGNGRMPSLCATLLQNLEEFMNKDEQLGKQEPEGRIACSLLSGSLSMALC 130 Query: 1891 YIQRVIRSTNPHPQPRILCLQGSPDGPQQHVGVMNAIFSAQRSMIPIDACIVGSEHSAFL 1712 YIQRV RS HPQPRILCLQGSPDGP+Q+V +MNAIFSAQRSM+PID+C +G+++SAFL Sbjct: 131 YIQRVFRSGLLHPQPRILCLQGSPDGPEQYVAIMNAIFSAQRSMVPIDSCYLGAQNSAFL 190 Query: 1711 QQASHITGGIYLKPQFVQGLFQFLAMVFATDLHSRRFLQLPRPTGVDFRASCFCHKKAID 1532 QQAS+ITGG++ KPQ + GLFQ+L +F TDLHSR FLQLP+P GVDFRASCFCHK ID Sbjct: 191 QQASYITGGVHHKPQQLDGLFQYLLTIFGTDLHSRNFLQLPKPVGVDFRASCFCHKNTID 250 Query: 1531 MGYVCSVCLSIFCEPLKKCSTCESVFNK 1448 MGY+CSVCLSI+C+ LKKCSTC SVF + Sbjct: 251 MGYICSVCLSIYCKHLKKCSTCGSVFGQ 278 >XP_002307429.2 basal transcription factor complex subunit-related family protein [Populus trichocarpa] EEE94425.2 basal transcription factor complex subunit-related family protein [Populus trichocarpa] Length = 298 Score = 321 bits (823), Expect = e-100 Identities = 164/270 (60%), Positives = 194/270 (71%), Gaps = 2/270 (0%) Frame = -3 Query: 2251 TNPFFWGRQIDKNSQEPDASPLTFAQFLEHAFAFFNSILLLHQLNHLVVIGTGMNTCEFI 2072 TNPFFW S L+F+QFL H AF NSILLL+QLN +VVI +G NTC++I Sbjct: 22 TNPFFW----------TPPSSLSFSQFLSHVLAFVNSILLLNQLNQVVVIASGYNTCDYI 71 Query: 2071 YDSTTKVKELKGFNEFMTPSTL--ISQNLEEFVKKDHELYKNNTETKNMYXXXXXXXXXX 1898 YDS++ +L G + PS + Q LEEF+ KD +L K ++ Sbjct: 72 YDSSSDASQL-GSEDGRMPSLYSNLLQKLEEFMIKDEKLGKEQSQRAIKSSLLSGSLSMA 130 Query: 1897 LCYIQRVIRSTNPHPQPRILCLQGSPDGPQQHVGVMNAIFSAQRSMIPIDACIVGSEHSA 1718 LCYIQRV RS HPQPRILCLQGSPDGP+Q+V VMNAIFSAQRSM+PID+C VG+ +SA Sbjct: 131 LCYIQRVFRSGPLHPQPRILCLQGSPDGPEQYVAVMNAIFSAQRSMVPIDSCYVGAHNSA 190 Query: 1717 FLQQASHITGGIYLKPQFVQGLFQFLAMVFATDLHSRRFLQLPRPTGVDFRASCFCHKKA 1538 FLQQAS+ITGG+Y+KPQ + GLFQ+L VFATDLHSR F+QLPRP GVDFRASCFCHK Sbjct: 191 FLQQASYITGGVYVKPQHLDGLFQYLTTVFATDLHSRSFIQLPRPAGVDFRASCFCHKTT 250 Query: 1537 IDMGYVCSVCLSIFCEPLKKCSTCESVFNK 1448 IDMGY+CSVCLSIFC KKCSTC SVF + Sbjct: 251 IDMGYICSVCLSIFCNHHKKCSTCGSVFGQ 280 >XP_010999370.1 PREDICTED: general transcription factor IIH subunit 3 isoform X2 [Populus euphratica] XP_010999371.1 PREDICTED: general transcription factor IIH subunit 3 isoform X2 [Populus euphratica] Length = 298 Score = 321 bits (822), Expect = e-100 Identities = 164/270 (60%), Positives = 194/270 (71%), Gaps = 2/270 (0%) Frame = -3 Query: 2251 TNPFFWGRQIDKNSQEPDASPLTFAQFLEHAFAFFNSILLLHQLNHLVVIGTGMNTCEFI 2072 TNPFFW +S L+F+QFL H AF NSILLL+QLN +VVI +G NTC++I Sbjct: 22 TNPFFWTA----------SSSLSFSQFLSHVLAFVNSILLLNQLNQVVVIASGYNTCDYI 71 Query: 2071 YDSTTKVKELKGFNEFMTPSTL--ISQNLEEFVKKDHELYKNNTETKNMYXXXXXXXXXX 1898 YDS++ +L G PS + Q LEEF+ KD +L K ++ Sbjct: 72 YDSSSDASQL-GSENGRIPSLYSNLLQKLEEFMIKDEKLGKEQSQRAIKSSLLSGSLSMA 130 Query: 1897 LCYIQRVIRSTNPHPQPRILCLQGSPDGPQQHVGVMNAIFSAQRSMIPIDACIVGSEHSA 1718 LCYIQRV RS HPQPRILCLQGSPDGP+Q+V VMNAIFSAQRSM+PID+C VG+ +SA Sbjct: 131 LCYIQRVFRSGPLHPQPRILCLQGSPDGPEQYVAVMNAIFSAQRSMVPIDSCYVGAHNSA 190 Query: 1717 FLQQASHITGGIYLKPQFVQGLFQFLAMVFATDLHSRRFLQLPRPTGVDFRASCFCHKKA 1538 FLQQAS+ITGG+Y+KPQ + GLFQ+L VFATDLHSR F+QLPRP GVDFRASCFCHK Sbjct: 191 FLQQASYITGGVYVKPQHLDGLFQYLTTVFATDLHSRSFIQLPRPAGVDFRASCFCHKTT 250 Query: 1537 IDMGYVCSVCLSIFCEPLKKCSTCESVFNK 1448 IDMGY+CSVCLSIFC KKCSTC SVF + Sbjct: 251 IDMGYICSVCLSIFCNHHKKCSTCGSVFGQ 280 >XP_010273663.1 PREDICTED: RNA polymerase II transcription factor B subunit 4 isoform X1 [Nelumbo nucifera] Length = 303 Score = 320 bits (820), Expect = 1e-99 Identities = 156/270 (57%), Positives = 198/270 (73%), Gaps = 2/270 (0%) Frame = -3 Query: 2251 TNPFFWGRQIDKNSQEPDASPLTFAQFLEHAFAFFNSILLLHQLNHLVVIGTGMNTCEFI 2072 TNPF W + + + L+F +FL H F+F NSILLL+QLN +VVI TG+N+C++I Sbjct: 22 TNPFLW------SGENTTTNSLSFPKFLTHVFSFLNSILLLNQLNQVVVIATGLNSCDYI 75 Query: 2071 YDSTTKVKELKGFNEFMTPS--TLISQNLEEFVKKDHELYKNNTETKNMYXXXXXXXXXX 1898 YDS++ ++ P+ + + QNLEEF+ +D EL K+ + Sbjct: 76 YDSSSSPTTVESLENGRMPALCSKLLQNLEEFLARDQELNKDESPPGIASSLLSGSLSLA 135 Query: 1897 LCYIQRVIRSTNPHPQPRILCLQGSPDGPQQHVGVMNAIFSAQRSMIPIDACIVGSEHSA 1718 LCYIQ+V RS HPQPRILCLQGS DGP+Q+V +MNAIFSAQRSM+PIDAC++G++HSA Sbjct: 136 LCYIQKVFRSGPLHPQPRILCLQGSSDGPEQYVAIMNAIFSAQRSMVPIDACVIGAQHSA 195 Query: 1717 FLQQASHITGGIYLKPQFVQGLFQFLAMVFATDLHSRRFLQLPRPTGVDFRASCFCHKKA 1538 FLQQAS+ITGG+YLKP + GLFQ+L+ VF+TDL SR FLQLP+P GVDFRASCFCHKK Sbjct: 196 FLQQASYITGGVYLKPPQLDGLFQYLSTVFSTDLQSRSFLQLPKPVGVDFRASCFCHKKT 255 Query: 1537 IDMGYVCSVCLSIFCEPLKKCSTCESVFNK 1448 IDMGY+CSVCLSIFC+ KKCSTC SVF + Sbjct: 256 IDMGYICSVCLSIFCKHHKKCSTCGSVFGQ 285 >KDO80684.1 hypothetical protein CISIN_1g022374mg [Citrus sinensis] Length = 298 Score = 319 bits (817), Expect = 3e-99 Identities = 155/268 (57%), Positives = 193/268 (72%) Frame = -3 Query: 2251 TNPFFWGRQIDKNSQEPDASPLTFAQFLEHAFAFFNSILLLHQLNHLVVIGTGMNTCEFI 2072 TNPFFW +S L+F+QFL H AF N+IL L+QLN +VVI TG N+C+++ Sbjct: 22 TNPFFWS-----------SSSLSFSQFLTHVLAFLNAILTLNQLNQVVVIATGYNSCDYV 70 Query: 2071 YDSTTKVKELKGFNEFMTPSTLISQNLEEFVKKDHELYKNNTETKNMYXXXXXXXXXXLC 1892 YDS++ + G + + QNLEEF+ KD +L K E + LC Sbjct: 71 YDSSSTGNQSVGNGRMPSLCATLLQNLEEFMNKDEQLGKQEPEGRIACSLLSGSLSMALC 130 Query: 1891 YIQRVIRSTNPHPQPRILCLQGSPDGPQQHVGVMNAIFSAQRSMIPIDACIVGSEHSAFL 1712 YIQRV RS HPQPRILCLQGSPDGP+Q+V +MNAIFSAQRSM+PID+C +G+++SAFL Sbjct: 131 YIQRVFRSGLLHPQPRILCLQGSPDGPEQYVAIMNAIFSAQRSMVPIDSCYLGAQNSAFL 190 Query: 1711 QQASHITGGIYLKPQFVQGLFQFLAMVFATDLHSRRFLQLPRPTGVDFRASCFCHKKAID 1532 QQAS+ITGG++ KPQ + GLFQ+L +F TDLHSR FLQLP+P GVDFRASCFCHK ID Sbjct: 191 QQASYITGGVHHKPQQLDGLFQYLLTIFGTDLHSRNFLQLPKPVGVDFRASCFCHKNTID 250 Query: 1531 MGYVCSVCLSIFCEPLKKCSTCESVFNK 1448 MGY+CSVCLSI+C+ LKKCSTC SVF + Sbjct: 251 MGYICSVCLSIYCKHLKKCSTCGSVFGQ 278 >XP_012078222.1 PREDICTED: general transcription factor IIH subunit 3 isoform X2 [Jatropha curcas] KDP32789.1 hypothetical protein JCGZ_12081 [Jatropha curcas] Length = 296 Score = 317 bits (811), Expect = 2e-98 Identities = 160/268 (59%), Positives = 188/268 (70%) Frame = -3 Query: 2251 TNPFFWGRQIDKNSQEPDASPLTFAQFLEHAFAFFNSILLLHQLNHLVVIGTGMNTCEFI 2072 TNPFFW S L F+QFL H AF NSILLL+QLN +VVI TG N+C ++ Sbjct: 22 TNPFFW-----------TTSSLLFSQFLSHVLAFLNSILLLNQLNQVVVIATGYNSCNYV 70 Query: 2071 YDSTTKVKELKGFNEFMTPSTLISQNLEEFVKKDHELYKNNTETKNMYXXXXXXXXXXLC 1892 YDS+ + + + Q LEEF+ KD +L K ++ K LC Sbjct: 71 YDSSLAANQSSEDGRMPALYSNLLQALEEFMIKDEKLGKEESQGKIASSLLSGSLSMALC 130 Query: 1891 YIQRVIRSTNPHPQPRILCLQGSPDGPQQHVGVMNAIFSAQRSMIPIDACIVGSEHSAFL 1712 YIQRV RS +PQPRILCLQGSPDGP+Q+V VMNAIFSAQRSM+PID+C VGS +SAFL Sbjct: 131 YIQRVFRSGPLNPQPRILCLQGSPDGPEQYVAVMNAIFSAQRSMVPIDSCYVGSHNSAFL 190 Query: 1711 QQASHITGGIYLKPQFVQGLFQFLAMVFATDLHSRRFLQLPRPTGVDFRASCFCHKKAID 1532 QQAS+ITGG+Y+KPQ + GLFQ+L VFATDLH R FLQLPRP GVDFRASCFCHK ID Sbjct: 191 QQASYITGGVYVKPQHLDGLFQYLVTVFATDLHCRSFLQLPRPAGVDFRASCFCHKTTID 250 Query: 1531 MGYVCSVCLSIFCEPLKKCSTCESVFNK 1448 MGY+CSVCLSIFC+ KKCSTC SVF + Sbjct: 251 MGYICSVCLSIFCKQHKKCSTCGSVFGQ 278 >XP_010999372.1 PREDICTED: general transcription factor IIH subunit 3 isoform X3 [Populus euphratica] Length = 295 Score = 316 bits (809), Expect = 4e-98 Identities = 161/264 (60%), Positives = 190/264 (71%), Gaps = 2/264 (0%) Frame = -3 Query: 2251 TNPFFWGRQIDKNSQEPDASPLTFAQFLEHAFAFFNSILLLHQLNHLVVIGTGMNTCEFI 2072 TNPFFW +S L+F+QFL H AF NSILLL+QLN +VVI +G NTC++I Sbjct: 22 TNPFFWTA----------SSSLSFSQFLSHVLAFVNSILLLNQLNQVVVIASGYNTCDYI 71 Query: 2071 YDSTTKVKELKGFNEFMTPSTL--ISQNLEEFVKKDHELYKNNTETKNMYXXXXXXXXXX 1898 YDS++ +L G PS + Q LEEF+ KD +L K ++ Sbjct: 72 YDSSSDASQL-GSENGRIPSLYSNLLQKLEEFMIKDEKLGKEQSQRAIKSSLLSGSLSMA 130 Query: 1897 LCYIQRVIRSTNPHPQPRILCLQGSPDGPQQHVGVMNAIFSAQRSMIPIDACIVGSEHSA 1718 LCYIQRV RS HPQPRILCLQGSPDGP+Q+V VMNAIFSAQRSM+PID+C VG+ +SA Sbjct: 131 LCYIQRVFRSGPLHPQPRILCLQGSPDGPEQYVAVMNAIFSAQRSMVPIDSCYVGAHNSA 190 Query: 1717 FLQQASHITGGIYLKPQFVQGLFQFLAMVFATDLHSRRFLQLPRPTGVDFRASCFCHKKA 1538 FLQQAS+ITGG+Y+KPQ + GLFQ+L VFATDLHSR F+QLPRP GVDFRASCFCHK Sbjct: 191 FLQQASYITGGVYVKPQHLDGLFQYLTTVFATDLHSRSFIQLPRPAGVDFRASCFCHKTT 250 Query: 1537 IDMGYVCSVCLSIFCEPLKKCSTC 1466 IDMGY+CSVCLSIFC KKCSTC Sbjct: 251 IDMGYICSVCLSIFCNHHKKCSTC 274 >CBI19033.3 unnamed protein product, partial [Vitis vinifera] Length = 297 Score = 313 bits (803), Expect = 4e-97 Identities = 162/270 (60%), Positives = 192/270 (71%), Gaps = 2/270 (0%) Frame = -3 Query: 2251 TNPFFWGRQIDKNSQEPDASPLTFAQFLEHAFAFFNSILLLHQLNHLVVIGTGMNTCEFI 2072 TNPFFW + L F++FL H AF NSILL++QLN +VVI TG N+C FI Sbjct: 22 TNPFFWS-----------TASLPFSKFLSHVLAFLNSILLINQLNQVVVIATGCNSCNFI 70 Query: 2071 YDSTTKVKELKGFNEFMTP--STLISQNLEEFVKKDHELYKNNTETKNMYXXXXXXXXXX 1898 +DS++ N M S L+ Q LEEFV D +L K Sbjct: 71 FDSSSVPANPNLENGRMPALCSNLL-QKLEEFVTGDEKLSKEVLAAGIGSSLLSGSLSMA 129 Query: 1897 LCYIQRVIRSTNPHPQPRILCLQGSPDGPQQHVGVMNAIFSAQRSMIPIDACIVGSEHSA 1718 LCYIQRV R+ HPQPRILCLQGSPDGP+Q+V VMNAIFSAQRSM+PID+C++G++HSA Sbjct: 130 LCYIQRVFRTGPLHPQPRILCLQGSPDGPEQYVAVMNAIFSAQRSMVPIDSCVIGAQHSA 189 Query: 1717 FLQQASHITGGIYLKPQFVQGLFQFLAMVFATDLHSRRFLQLPRPTGVDFRASCFCHKKA 1538 FLQQAS+ITGG+YLKPQ + GLFQ+L+ VFATDLHSRRFLQLP+P GVDFRASCFCHK Sbjct: 190 FLQQASYITGGVYLKPQQLDGLFQYLSTVFATDLHSRRFLQLPKPAGVDFRASCFCHKNT 249 Query: 1537 IDMGYVCSVCLSIFCEPLKKCSTCESVFNK 1448 IDMGY+CSVCLSIFC+ KKCSTC SVF + Sbjct: 250 IDMGYICSVCLSIFCKHHKKCSTCGSVFGQ 279 >XP_011101336.1 PREDICTED: general transcription factor IIH subunit 3 [Sesamum indicum] XP_011101337.1 PREDICTED: general transcription factor IIH subunit 3 [Sesamum indicum] Length = 292 Score = 313 bits (802), Expect = 4e-97 Identities = 155/268 (57%), Positives = 193/268 (72%) Frame = -3 Query: 2251 TNPFFWGRQIDKNSQEPDASPLTFAQFLEHAFAFFNSILLLHQLNHLVVIGTGMNTCEFI 2072 TNPFFW NS + S L F++FL H AF N+I+LL+QLN +VVI TG N+C++I Sbjct: 22 TNPFFW------NSVK---SALPFSKFLSHVLAFLNAIVLLNQLNQVVVIATGYNSCDYI 72 Query: 2071 YDSTTKVKELKGFNEFMTPSTLISQNLEEFVKKDHELYKNNTETKNMYXXXXXXXXXXLC 1892 +DS+T + + + Q LE+FV KD L + ++ + LC Sbjct: 73 FDSSTSEGQTQRAEHLL-------QKLEDFVNKDESLCREDSVDGPGFSLLSGSLSMALC 125 Query: 1891 YIQRVIRSTNPHPQPRILCLQGSPDGPQQHVGVMNAIFSAQRSMIPIDACIVGSEHSAFL 1712 YIQRV RS HP PRILCL GSPDGP Q+V +MN+IFSAQRSM+PID+C++G++HSAFL Sbjct: 126 YIQRVFRSGPLHPHPRILCLHGSPDGPGQYVAIMNSIFSAQRSMVPIDSCVIGAQHSAFL 185 Query: 1711 QQASHITGGIYLKPQFVQGLFQFLAMVFATDLHSRRFLQLPRPTGVDFRASCFCHKKAID 1532 QQAS+ITGG+YLKPQ + GLFQ+L+ VFATDLHSR FLQLP+P GVDFRASCFCHK ID Sbjct: 186 QQASYITGGVYLKPQLLDGLFQYLSTVFATDLHSRGFLQLPKPAGVDFRASCFCHKNTID 245 Query: 1531 MGYVCSVCLSIFCEPLKKCSTCESVFNK 1448 MGY+CSVCLSIFC+ KKCSTC SVF + Sbjct: 246 MGYICSVCLSIFCKHQKKCSTCGSVFGQ 273 >XP_002284465.2 PREDICTED: RNA polymerase II transcription factor B subunit 4 [Vitis vinifera] Length = 303 Score = 313 bits (803), Expect = 4e-97 Identities = 162/270 (60%), Positives = 192/270 (71%), Gaps = 2/270 (0%) Frame = -3 Query: 2251 TNPFFWGRQIDKNSQEPDASPLTFAQFLEHAFAFFNSILLLHQLNHLVVIGTGMNTCEFI 2072 TNPFFW + L F++FL H AF NSILL++QLN +VVI TG N+C FI Sbjct: 28 TNPFFWS-----------TASLPFSKFLSHVLAFLNSILLINQLNQVVVIATGCNSCNFI 76 Query: 2071 YDSTTKVKELKGFNEFMTP--STLISQNLEEFVKKDHELYKNNTETKNMYXXXXXXXXXX 1898 +DS++ N M S L+ Q LEEFV D +L K Sbjct: 77 FDSSSVPANPNLENGRMPALCSNLL-QKLEEFVTGDEKLSKEVLAAGIGSSLLSGSLSMA 135 Query: 1897 LCYIQRVIRSTNPHPQPRILCLQGSPDGPQQHVGVMNAIFSAQRSMIPIDACIVGSEHSA 1718 LCYIQRV R+ HPQPRILCLQGSPDGP+Q+V VMNAIFSAQRSM+PID+C++G++HSA Sbjct: 136 LCYIQRVFRTGPLHPQPRILCLQGSPDGPEQYVAVMNAIFSAQRSMVPIDSCVIGAQHSA 195 Query: 1717 FLQQASHITGGIYLKPQFVQGLFQFLAMVFATDLHSRRFLQLPRPTGVDFRASCFCHKKA 1538 FLQQAS+ITGG+YLKPQ + GLFQ+L+ VFATDLHSRRFLQLP+P GVDFRASCFCHK Sbjct: 196 FLQQASYITGGVYLKPQQLDGLFQYLSTVFATDLHSRRFLQLPKPAGVDFRASCFCHKNT 255 Query: 1537 IDMGYVCSVCLSIFCEPLKKCSTCESVFNK 1448 IDMGY+CSVCLSIFC+ KKCSTC SVF + Sbjct: 256 IDMGYICSVCLSIFCKHHKKCSTCGSVFGQ 285 >OAY58252.1 hypothetical protein MANES_02G162200 [Manihot esculenta] Length = 296 Score = 313 bits (801), Expect = 7e-97 Identities = 159/268 (59%), Positives = 187/268 (69%) Frame = -3 Query: 2251 TNPFFWGRQIDKNSQEPDASPLTFAQFLEHAFAFFNSILLLHQLNHLVVIGTGMNTCEFI 2072 TNPFFW S L F+QFL AF NS+LLL+QLN +VVI TG N+C++I Sbjct: 22 TNPFFW-----------TTSSLPFSQFLAQVLAFLNSMLLLNQLNQVVVIATGYNSCDYI 70 Query: 2071 YDSTTKVKELKGFNEFMTPSTLISQNLEEFVKKDHELYKNNTETKNMYXXXXXXXXXXLC 1892 YDS++ + + Q LEEF+ +D +L K K LC Sbjct: 71 YDSSSAPNHSSEDARLPALYSNLLQKLEEFMIRDEKLGKEEPRGKLASSLLSGSLSMALC 130 Query: 1891 YIQRVIRSTNPHPQPRILCLQGSPDGPQQHVGVMNAIFSAQRSMIPIDACIVGSEHSAFL 1712 YIQRV RS HPQPRILCLQGSPDGP+Q+V VMNAIFSAQRSM+PID+C VG+ +SAFL Sbjct: 131 YIQRVFRSGPLHPQPRILCLQGSPDGPEQYVAVMNAIFSAQRSMVPIDSCYVGAHNSAFL 190 Query: 1711 QQASHITGGIYLKPQFVQGLFQFLAMVFATDLHSRRFLQLPRPTGVDFRASCFCHKKAID 1532 QQAS+ITGG+Y+KPQ + GLFQ+L VFATDLHSR FLQLPRP GVDFRASCFCHK ID Sbjct: 191 QQASYITGGVYVKPQHLDGLFQYLVTVFATDLHSRSFLQLPRPAGVDFRASCFCHKMTID 250 Query: 1531 MGYVCSVCLSIFCEPLKKCSTCESVFNK 1448 MGY+CSVCLSIFC+ KKCSTC SVF + Sbjct: 251 MGYICSVCLSIFCKHHKKCSTCGSVFGQ 278 >XP_008219657.1 PREDICTED: RNA polymerase II transcription factor B subunit 4 [Prunus mume] Length = 296 Score = 312 bits (800), Expect = 1e-96 Identities = 159/268 (59%), Positives = 184/268 (68%) Frame = -3 Query: 2251 TNPFFWGRQIDKNSQEPDASPLTFAQFLEHAFAFFNSILLLHQLNHLVVIGTGMNTCEFI 2072 TNPFFW +S L F+ FL H F NSILLL+QLN +VVI TG N+C +I Sbjct: 22 TNPFFWS-----------SSSLPFSVFLSHVLTFLNSILLLNQLNQVVVIATGYNSCSYI 70 Query: 2071 YDSTTKVKELKGFNEFMTPSTLISQNLEEFVKKDHELYKNNTETKNMYXXXXXXXXXXLC 1892 YDS+T + + Q LEEFV KD +L K LC Sbjct: 71 YDSSTSTNQGSDNGRMPARCVNLLQKLEEFVIKDEQLIKEGLREGIASSLLSGSLSMALC 130 Query: 1891 YIQRVIRSTNPHPQPRILCLQGSPDGPQQHVGVMNAIFSAQRSMIPIDACIVGSEHSAFL 1712 YIQRV RS HPQPRILCLQGS DGP+Q+V +MNAIFSAQRSM+PID+C +GS +SAFL Sbjct: 131 YIQRVFRSGPLHPQPRILCLQGSSDGPEQYVAIMNAIFSAQRSMVPIDSCYMGSSNSAFL 190 Query: 1711 QQASHITGGIYLKPQFVQGLFQFLAMVFATDLHSRRFLQLPRPTGVDFRASCFCHKKAID 1532 QQAS+ITGG+YLKPQ GLFQ+L+ VFATDLHSR FLQLP+ GVDFRASCFCHKK ID Sbjct: 191 QQASYITGGVYLKPQQPNGLFQYLSTVFATDLHSRAFLQLPKSLGVDFRASCFCHKKTID 250 Query: 1531 MGYVCSVCLSIFCEPLKKCSTCESVFNK 1448 MGY+CSVCLSIFC+ KKCSTC SVF + Sbjct: 251 MGYICSVCLSIFCKHHKKCSTCGSVFGQ 278 >XP_008391898.1 PREDICTED: RNA polymerase II transcription factor B subunit 4 [Malus domestica] XP_008391899.1 PREDICTED: RNA polymerase II transcription factor B subunit 4 [Malus domestica] Length = 297 Score = 312 bits (800), Expect = 1e-96 Identities = 159/269 (59%), Positives = 190/269 (70%), Gaps = 1/269 (0%) Frame = -3 Query: 2251 TNPFFWGRQIDKNSQEPDASPLTFAQFLEHAFAFFNSILLLHQLNHLVVIGTGMNTCEFI 2072 TNPFFW +S L F++FL H AF NSILLL+QLN +VVI TG N+C +I Sbjct: 22 TNPFFWS-----------SSNLPFSKFLPHVLAFLNSILLLNQLNQVVVIXTGYNSCSYI 70 Query: 2071 YDSTTKVKELKGFNEFMTPS-TLISQNLEEFVKKDHELYKNNTETKNMYXXXXXXXXXXL 1895 YDS++ + M + + Q LEEFV KD +L+K + L Sbjct: 71 YDSSSDSNQGSDHGRIMPARCSXLLQKLEEFVIKDEQLFKEGSREGISSSLLSGSLSMAL 130 Query: 1894 CYIQRVIRSTNPHPQPRILCLQGSPDGPQQHVGVMNAIFSAQRSMIPIDACIVGSEHSAF 1715 CYIQRV RS HPQPRILCLQGS DGP+Q+V +MN+IFSAQRSM+PID+C +GS +SAF Sbjct: 131 CYIQRVFRSGPLHPQPRILCLQGSSDGPEQYVAIMNSIFSAQRSMVPIDSCYMGSSNSAF 190 Query: 1714 LQQASHITGGIYLKPQFVQGLFQFLAMVFATDLHSRRFLQLPRPTGVDFRASCFCHKKAI 1535 LQQAS+ITGG+YLKPQ GLFQ+L+ VFATDLHSR FLQLP+ GVDFRASCFCHKK I Sbjct: 191 LQQASYITGGVYLKPQQPNGLFQYLSTVFATDLHSRAFLQLPKSLGVDFRASCFCHKKTI 250 Query: 1534 DMGYVCSVCLSIFCEPLKKCSTCESVFNK 1448 DMGY+CSVCLSIFC+ KKCSTC SVF + Sbjct: 251 DMGYICSVCLSIFCKHHKKCSTCGSVFGQ 279 >XP_004152842.1 PREDICTED: general transcription factor IIH subunit 3 [Cucumis sativus] XP_011648981.1 PREDICTED: general transcription factor IIH subunit 3 [Cucumis sativus] KGN61231.1 hypothetical protein Csa_2G072450 [Cucumis sativus] Length = 295 Score = 312 bits (799), Expect = 1e-96 Identities = 158/270 (58%), Positives = 194/270 (71%), Gaps = 2/270 (0%) Frame = -3 Query: 2251 TNPFFWGRQIDKNSQEPDASPLTFAQFLEHAFAFFNSILLLHQLNHLVVIGTGMNTCEFI 2072 TNPFFW S L F++FL H AF NSIL+L+QLN +VVIGTG +C+++ Sbjct: 22 TNPFFWS-----------TSALPFSKFLSHVLAFLNSILVLNQLNEVVVIGTGYASCKYL 70 Query: 2071 YDSTTKVKELKGFNEFMTPS--TLISQNLEEFVKKDHELYKNNTETKNMYXXXXXXXXXX 1898 Y+S++ G + P+ T + +NLEEFV D + K + + M Sbjct: 71 YNSSSYSNH--GLEDGRMPALCTRLLKNLEEFVIGDEQSIKEDPKGGTMSSLLSGSLSMA 128 Query: 1897 LCYIQRVIRSTNPHPQPRILCLQGSPDGPQQHVGVMNAIFSAQRSMIPIDACIVGSEHSA 1718 LCYIQ+V RS + HPQPRILCLQGSPDGP+Q+V +MNAIFSAQRSM+PID+C +GS +SA Sbjct: 129 LCYIQKVFRSGSLHPQPRILCLQGSPDGPEQYVAIMNAIFSAQRSMVPIDSCYIGSHNSA 188 Query: 1717 FLQQASHITGGIYLKPQFVQGLFQFLAMVFATDLHSRRFLQLPRPTGVDFRASCFCHKKA 1538 FLQQAS+ITGG+YLKPQ + GLFQ+L+ VF TDLHSR FLQLP+ GVDFRASCFCHKK Sbjct: 189 FLQQASYITGGVYLKPQQMDGLFQYLSTVFGTDLHSRTFLQLPKSVGVDFRASCFCHKKT 248 Query: 1537 IDMGYVCSVCLSIFCEPLKKCSTCESVFNK 1448 IDMGYVCSVCLSIFC+ KKCSTC SVF + Sbjct: 249 IDMGYVCSVCLSIFCKHHKKCSTCGSVFGE 278 >XP_012078217.1 PREDICTED: general transcription factor IIH subunit 3 isoform X1 [Jatropha curcas] XP_012078218.1 PREDICTED: general transcription factor IIH subunit 3 isoform X1 [Jatropha curcas] XP_012078219.1 PREDICTED: general transcription factor IIH subunit 3 isoform X1 [Jatropha curcas] XP_012078220.1 PREDICTED: general transcription factor IIH subunit 3 isoform X1 [Jatropha curcas] Length = 297 Score = 312 bits (799), Expect = 1e-96 Identities = 160/269 (59%), Positives = 188/269 (69%), Gaps = 1/269 (0%) Frame = -3 Query: 2251 TNPFFWGRQIDKNSQEPDASPLTFAQFLEHAFAFFNSILLLHQLNHLVVIGTGMNTCEFI 2072 TNPFFW S L F+QFL H AF NSILLL+QLN +VVI TG N+C ++ Sbjct: 22 TNPFFW-----------TTSSLLFSQFLSHVLAFLNSILLLNQLNQVVVIATGYNSCNYV 70 Query: 2071 YDSTTKVKELKGFNEFMTPSTLISQNLEEFVKKDHELYKNNTETKNMYXXXXXXXXXXLC 1892 YDS+ + + + Q LEEF+ KD +L K ++ K LC Sbjct: 71 YDSSLAANQSSEDGRMPALYSNLLQALEEFMIKDEKLGKEESQGKIASSLLSGSLSMALC 130 Query: 1891 YIQRVIRSTNPHPQPRILCLQGSPDGPQQHVGVMNAIFSAQRSMIPIDACIVGSEHSAFL 1712 YIQRV RS +PQPRILCLQGSPDGP+Q+V VMNAIFSAQRSM+PID+C VGS +SAFL Sbjct: 131 YIQRVFRSGPLNPQPRILCLQGSPDGPEQYVAVMNAIFSAQRSMVPIDSCYVGSHNSAFL 190 Query: 1711 QQ-ASHITGGIYLKPQFVQGLFQFLAMVFATDLHSRRFLQLPRPTGVDFRASCFCHKKAI 1535 QQ AS+ITGG+Y+KPQ + GLFQ+L VFATDLH R FLQLPRP GVDFRASCFCHK I Sbjct: 191 QQQASYITGGVYVKPQHLDGLFQYLVTVFATDLHCRSFLQLPRPAGVDFRASCFCHKTTI 250 Query: 1534 DMGYVCSVCLSIFCEPLKKCSTCESVFNK 1448 DMGY+CSVCLSIFC+ KKCSTC SVF + Sbjct: 251 DMGYICSVCLSIFCKQHKKCSTCGSVFGQ 279 >XP_019250014.1 PREDICTED: RNA polymerase II transcription factor B subunit 4-like isoform X2 [Nicotiana attenuata] Length = 275 Score = 311 bits (796), Expect = 2e-96 Identities = 155/268 (57%), Positives = 191/268 (71%) Frame = -3 Query: 2251 TNPFFWGRQIDKNSQEPDASPLTFAQFLEHAFAFFNSILLLHQLNHLVVIGTGMNTCEFI 2072 TNP+FW KN+ TF++FL H AF NS+LLL+Q+N +VVI TG N+C+++ Sbjct: 6 TNPYFWSSM--KNTA------FTFSKFLSHVLAFLNSLLLLNQMNQVVVIATGYNSCDYV 57 Query: 2071 YDSTTKVKELKGFNEFMTPSTLISQNLEEFVKKDHELYKNNTETKNMYXXXXXXXXXXLC 1892 +DS++ M + + + LEEFV KD L + ++ + LC Sbjct: 58 FDSSSSS---------MQRAECLLEKLEEFVDKDESLSQEDSVDGVGFSLLSGSLSMALC 108 Query: 1891 YIQRVIRSTNPHPQPRILCLQGSPDGPQQHVGVMNAIFSAQRSMIPIDACIVGSEHSAFL 1712 YIQRV R+ HPQPRILCL GSPDGP Q+V VMNAIFSAQRSM+PID+C++GS+HSAFL Sbjct: 109 YIQRVFRTGPLHPQPRILCLHGSPDGPGQYVAVMNAIFSAQRSMVPIDSCVIGSQHSAFL 168 Query: 1711 QQASHITGGIYLKPQFVQGLFQFLAMVFATDLHSRRFLQLPRPTGVDFRASCFCHKKAID 1532 QQAS+ITGG+YLKPQ GLFQ+L+ VFATDLHSR FLQLPRP GVDFRASCFCHK ID Sbjct: 169 QQASYITGGVYLKPQVSDGLFQYLSTVFATDLHSRAFLQLPRPVGVDFRASCFCHKNTID 228 Query: 1531 MGYVCSVCLSIFCEPLKKCSTCESVFNK 1448 MGY+CSVCLSIFC+ KKCSTC S F + Sbjct: 229 MGYICSVCLSIFCKHHKKCSTCGSNFGE 256 >XP_010999369.1 PREDICTED: general transcription factor IIH subunit 3 isoform X1 [Populus euphratica] Length = 411 Score = 316 bits (809), Expect = 2e-96 Identities = 161/264 (60%), Positives = 190/264 (71%), Gaps = 2/264 (0%) Frame = -3 Query: 2251 TNPFFWGRQIDKNSQEPDASPLTFAQFLEHAFAFFNSILLLHQLNHLVVIGTGMNTCEFI 2072 TNPFFW +S L+F+QFL H AF NSILLL+QLN +VVI +G NTC++I Sbjct: 22 TNPFFWTA----------SSSLSFSQFLSHVLAFVNSILLLNQLNQVVVIASGYNTCDYI 71 Query: 2071 YDSTTKVKELKGFNEFMTPSTL--ISQNLEEFVKKDHELYKNNTETKNMYXXXXXXXXXX 1898 YDS++ +L G PS + Q LEEF+ KD +L K ++ Sbjct: 72 YDSSSDASQL-GSENGRIPSLYSNLLQKLEEFMIKDEKLGKEQSQRAIKSSLLSGSLSMA 130 Query: 1897 LCYIQRVIRSTNPHPQPRILCLQGSPDGPQQHVGVMNAIFSAQRSMIPIDACIVGSEHSA 1718 LCYIQRV RS HPQPRILCLQGSPDGP+Q+V VMNAIFSAQRSM+PID+C VG+ +SA Sbjct: 131 LCYIQRVFRSGPLHPQPRILCLQGSPDGPEQYVAVMNAIFSAQRSMVPIDSCYVGAHNSA 190 Query: 1717 FLQQASHITGGIYLKPQFVQGLFQFLAMVFATDLHSRRFLQLPRPTGVDFRASCFCHKKA 1538 FLQQAS+ITGG+Y+KPQ + GLFQ+L VFATDLHSR F+QLPRP GVDFRASCFCHK Sbjct: 191 FLQQASYITGGVYVKPQHLDGLFQYLTTVFATDLHSRSFIQLPRPAGVDFRASCFCHKTT 250 Query: 1537 IDMGYVCSVCLSIFCEPLKKCSTC 1466 IDMGY+CSVCLSIFC KKCSTC Sbjct: 251 IDMGYICSVCLSIFCNHHKKCSTC 274 >XP_019250007.1 PREDICTED: RNA polymerase II transcription factor B subunit 4-like isoform X1 [Nicotiana attenuata] OIT08372.1 rna polymerase ii transcription factor b subunit 4 [Nicotiana attenuata] Length = 291 Score = 311 bits (796), Expect = 3e-96 Identities = 155/268 (57%), Positives = 191/268 (71%) Frame = -3 Query: 2251 TNPFFWGRQIDKNSQEPDASPLTFAQFLEHAFAFFNSILLLHQLNHLVVIGTGMNTCEFI 2072 TNP+FW KN+ TF++FL H AF NS+LLL+Q+N +VVI TG N+C+++ Sbjct: 22 TNPYFWSSM--KNTA------FTFSKFLSHVLAFLNSLLLLNQMNQVVVIATGYNSCDYV 73 Query: 2071 YDSTTKVKELKGFNEFMTPSTLISQNLEEFVKKDHELYKNNTETKNMYXXXXXXXXXXLC 1892 +DS++ M + + + LEEFV KD L + ++ + LC Sbjct: 74 FDSSSSS---------MQRAECLLEKLEEFVDKDESLSQEDSVDGVGFSLLSGSLSMALC 124 Query: 1891 YIQRVIRSTNPHPQPRILCLQGSPDGPQQHVGVMNAIFSAQRSMIPIDACIVGSEHSAFL 1712 YIQRV R+ HPQPRILCL GSPDGP Q+V VMNAIFSAQRSM+PID+C++GS+HSAFL Sbjct: 125 YIQRVFRTGPLHPQPRILCLHGSPDGPGQYVAVMNAIFSAQRSMVPIDSCVIGSQHSAFL 184 Query: 1711 QQASHITGGIYLKPQFVQGLFQFLAMVFATDLHSRRFLQLPRPTGVDFRASCFCHKKAID 1532 QQAS+ITGG+YLKPQ GLFQ+L+ VFATDLHSR FLQLPRP GVDFRASCFCHK ID Sbjct: 185 QQASYITGGVYLKPQVSDGLFQYLSTVFATDLHSRAFLQLPRPVGVDFRASCFCHKNTID 244 Query: 1531 MGYVCSVCLSIFCEPLKKCSTCESVFNK 1448 MGY+CSVCLSIFC+ KKCSTC S F + Sbjct: 245 MGYICSVCLSIFCKHHKKCSTCGSNFGE 272 >XP_010675067.1 PREDICTED: RNA polymerase II transcription factor B subunit 4 isoform X1 [Beta vulgaris subsp. vulgaris] KMT19706.1 hypothetical protein BVRB_1g007610 [Beta vulgaris subsp. vulgaris] Length = 306 Score = 311 bits (797), Expect = 4e-96 Identities = 158/275 (57%), Positives = 195/275 (70%), Gaps = 7/275 (2%) Frame = -3 Query: 2251 TNPFFWGRQIDKNSQEPDASPLTFAQFLEHAFAFFNSILLLHQLNHLVVIGTGMNTCEFI 2072 TNP+FW S P +S L+F+ FL H +F NSILLL+QLN +V+I TG NTC +I Sbjct: 22 TNPYFW------TSSSPSSS-LSFSHFLSHVLSFVNSILLLNQLNQVVIIATGHNTCGYI 74 Query: 2071 YDST-TKVKELKGFNEFMTPSTL------ISQNLEEFVKKDHELYKNNTETKNMYXXXXX 1913 +DS+ + V N+ +T+ + +NLEEFV KD L + Sbjct: 75 FDSSLSSVSSSISSNQSSDNATMPSFCSDVMKNLEEFVTKDESLSSVDVVHGVDSSLLSG 134 Query: 1912 XXXXXLCYIQRVIRSTNPHPQPRILCLQGSPDGPQQHVGVMNAIFSAQRSMIPIDACIVG 1733 LCYIQRV RS HPQPRILCL GSPDGP+Q+V VMNAIFSAQRSM+PID+C++G Sbjct: 135 SLSMALCYIQRVFRSGPLHPQPRILCLHGSPDGPEQYVAVMNAIFSAQRSMVPIDSCVIG 194 Query: 1732 SEHSAFLQQASHITGGIYLKPQFVQGLFQFLAMVFATDLHSRRFLQLPRPTGVDFRASCF 1553 +HSAFLQQAS+ITGG+YLKPQ ++GLFQ+L+ VFATDLHSR F+QLP+P GVDFRASCF Sbjct: 195 GQHSAFLQQASYITGGVYLKPQQLEGLFQYLSTVFATDLHSRNFIQLPKPVGVDFRASCF 254 Query: 1552 CHKKAIDMGYVCSVCLSIFCEPLKKCSTCESVFNK 1448 CHK IDMGY+CSVCLSIFC KKCSTC S++ + Sbjct: 255 CHKNTIDMGYICSVCLSIFCMHHKKCSTCGSLYGR 289