BLASTX nr result
ID: Ephedra29_contig00001653
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra29_contig00001653
(6393 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_006828844.1 PREDICTED: DNA-directed RNA polymerase II subunit... 2736 0.0
XP_002285900.1 PREDICTED: DNA-directed RNA polymerase II subunit... 2712 0.0
XP_008806151.1 PREDICTED: DNA-directed RNA polymerase II subunit... 2705 0.0
XP_010935180.1 PREDICTED: DNA-directed RNA polymerase II subunit... 2703 0.0
XP_010266907.1 PREDICTED: DNA-directed RNA polymerase II subunit... 2702 0.0
XP_010941355.1 PREDICTED: DNA-directed RNA polymerase II subunit... 2696 0.0
AIO05697.1 DNA-directed RNA polymerase II subunit 1, partial [Co... 2694 0.0
XP_018807320.1 PREDICTED: DNA-directed RNA polymerase II subunit... 2692 0.0
XP_006659128.1 PREDICTED: DNA-directed RNA polymerase II subunit... 2686 0.0
XP_020113244.1 DNA-directed RNA polymerase II subunit 1 [Ananas ... 2681 0.0
ONK55404.1 uncharacterized protein A4U43_UnF3880 [Asparagus offi... 2680 0.0
KMZ69245.1 DNA-directed RNA polymerase [Zostera marina] 2677 0.0
GAV78585.1 RNA_pol_Rpb1_2 domain-containing protein/RNA_pol_Rpb1... 2676 0.0
XP_015649819.1 PREDICTED: DNA-directed RNA polymerase II subunit... 2675 0.0
XP_015889758.1 PREDICTED: DNA-directed RNA polymerase II subunit... 2674 0.0
XP_011099129.1 PREDICTED: DNA-directed RNA polymerase II subunit... 2674 0.0
XP_004287766.1 PREDICTED: DNA-directed RNA polymerase II subunit... 2674 0.0
XP_017252141.1 PREDICTED: DNA-directed RNA polymerase II subunit... 2673 0.0
KRH28857.1 hypothetical protein GLYMA_11G081200 [Glycine max] 2672 0.0
XP_006590737.1 PREDICTED: DNA-directed RNA polymerase II subunit... 2672 0.0
>XP_006828844.1 PREDICTED: DNA-directed RNA polymerase II subunit 1 [Amborella
trichopoda] ERM96260.1 hypothetical protein
AMTR_s00001p00152770 [Amborella trichopoda]
Length = 1844
Score = 2736 bits (7091), Expect = 0.0
Identities = 1334/1538 (86%), Positives = 1450/1538 (94%), Gaps = 1/1538 (0%)
Frame = -2
Query: 6140 MDTRFPFSPAEVAKVKMVQFGIISPDEIRQMSVAQIEHSEIYDNGKPRTGGLSDPRLGTI 5961
MD RFP+SPAEVAKV++VQFGI+SP+EIR MSV +I+HSE + GKP+ GLSDPRLGTI
Sbjct: 1 MDMRFPYSPAEVAKVRVVQFGILSPEEIRNMSVVEIQHSETMERGKPKPSGLSDPRLGTI 60
Query: 5960 DRKLKCESCAAGMAECPGHFGHLELAKPMYHIGFLKTVLSILRCVCFNCSRILADEEDHR 5781
DRK+KC++C A MAECPGHFGHLELAKPM+HIGFLKTVLSI+RCVCFNCSRILADEEDHR
Sbjct: 61 DRKMKCDTCTANMAECPGHFGHLELAKPMFHIGFLKTVLSIMRCVCFNCSRILADEEDHR 120
Query: 5780 FKQAMKVKNPKHRLKRVLDCCKNKTKCEGGDSIXXXXXXXXXXEVKKKPHGGCGSQQPKI 5601
FKQA+K++NPK RLK+VLDCCKNKTKCEGGD I VKKK HGGCG+QQPKI
Sbjct: 121 FKQALKIRNPKTRLKKVLDCCKNKTKCEGGDDIDEDQAQDSEEVVKKKRHGGCGAQQPKI 180
Query: 5600 TIDGMKIIAEYRAPRKKADEQDQLMPEPVERKQQLTAERVLNILKRISDEECQMLGFDPQ 5421
TI+GMK++AEY+ PRKK DEQ+Q++PEPVERKQQL AE+VLN+LKRI+DE+CQ+LG +P+
Sbjct: 181 TIEGMKMVAEYKLPRKKNDEQEQMLPEPVERKQQLAAEKVLNVLKRITDEDCQLLGLNPK 240
Query: 5420 FARPDWMILQVLXXXXXXXXPSVMMNSTSRSEDDLTHQLAMIIRHNETLKKQEKNGAPAH 5241
+ARPDWMILQV+ PSVMM+++SRSEDDLTHQLAM+IRHNE LK+QEKNGAPAH
Sbjct: 241 YARPDWMILQVMPIPPPPVRPSVMMDTSSRSEDDLTHQLAMVIRHNENLKRQEKNGAPAH 300
Query: 5240 IVTEFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDF 5061
I++EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDF
Sbjct: 301 IISEFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDF 360
Query: 5060 SARTVITPDPNINIDQLGVPWSIALNLTYPEVVTPYNIERLKELVEYGPHPPPGKTGAKY 4881
SARTVITPDP INID+LGVPWSIALNLTYPE VTPYNIERLKELVEYGPHPPPGKTGAKY
Sbjct: 361 SARTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKY 420
Query: 4880 IIRDDGQRLDLRYLKRSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMP 4701
IIR+DGQRLDLRYLK+S DHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMP
Sbjct: 421 IIREDGQRLDLRYLKKSGDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMP 480
Query: 4700 YSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIV 4521
YSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIV
Sbjct: 481 YSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIV 540
Query: 4520 QDTLLGCRKITKRDTFIEKDVFMNILMWWEEFDGKIPAPTIYKPRPIWTGKQVFNLIIPK 4341
QDTLLGCRKITKRDTFIEKDVFMNILMWWE+FDGKIPAP I KPRP+WTGKQVFNLIIPK
Sbjct: 541 QDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPK 600
Query: 4340 QINLIRYSAWHNESEKGFLTLGDTQVRIEKGEVLCGTLCKKTLGSSSGSLIHVIWEEVGP 4161
QINLIRYSAWH+ESE GF+T GDT VRIE+GE+L GTLCKKTLG+SSGSLIHVIWEEVGP
Sbjct: 601 QINLIRYSAWHSESESGFITPGDTCVRIERGELLSGTLCKKTLGTSSGSLIHVIWEEVGP 660
Query: 4160 DAARKFLGHTQWLVNYWLLQQGFSMGIGDTIADAATMEKINETISNAKVKVQQLIEKAQE 3981
DAARKFLGHTQWLVNYWLLQQ FS+GIGDTIADAATMEKINETIS AK +V++LI+ AQE
Sbjct: 661 DAARKFLGHTQWLVNYWLLQQAFSIGIGDTIADAATMEKINETISKAKNEVKELIKAAQE 720
Query: 3980 KKLEAEPGRTMMESFENQVNQVLNKARDDAGNSAQKSLSESNNLKAMVTAGSKGSFINIS 3801
K+LEAEPGRTMMESFEN+VNQVLNKARDDAG+SAQKSLSESNNLKAMVTAGSKGSFINIS
Sbjct: 721 KQLEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINIS 780
Query: 3800 QMTACVGQQNVEGKRIPYGFNGRTLPHFTKDDKGPESRGFVENSYLRGLTPQEFFFHAMG 3621
QMTACVGQQNVEGKRIP+GFN RTLPHFTKDD GPESRGFVENSYLRGLTPQEFFFHAMG
Sbjct: 781 QMTACVGQQNVEGKRIPFGFNDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMG 840
Query: 3620 GREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIE 3441
GREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIE
Sbjct: 841 GREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIE 900
Query: 3440 SQKLDSLKMKRKEFDDTYKYEFDQDSWSPNYMLPVYIEDLKSIREFQNVFNAEVQKLEAD 3261
SQKLDSLKMKR EF++ YKYE DQ++WSP+YMLP ++EDLK+IREFQNVF+AEVQKLEAD
Sbjct: 901 SQKLDSLKMKRAEFENVYKYEIDQENWSPSYMLPEHVEDLKTIREFQNVFDAEVQKLEAD 960
Query: 3260 RRQLGIEIAPSGDNSWPLPVNLKRLIWNGQKLFKIDPRRPSDMHPMEIVEAIDKLQERLR 3081
R QLG EI +GDNSWP+PVNLKRLIWN QK+FK+D RRPSDMHPMEIVEA+DKLQERL+
Sbjct: 961 RHQLGTEITTTGDNSWPMPVNLKRLIWNAQKMFKVDLRRPSDMHPMEIVEAVDKLQERLK 1020
Query: 3080 VVPGDDGLSQEAQKNATLFFNILLRSTLASKRVLKEYHLTKEAFEWIVGEIEARFLQSLV 2901
VVPGDD +S EAQKNATLFFNILLRST ASKRVLKEY LT+EAF+W++GEIE+RFLQSLV
Sbjct: 1021 VVPGDDLMSIEAQKNATLFFNILLRSTFASKRVLKEYRLTREAFDWVIGEIESRFLQSLV 1080
Query: 2900 APGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSV 2721
APGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSV
Sbjct: 1081 APGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSV 1140
Query: 2720 YLKPEVGKTKERAKNVQCALEYTTLRSVTEATEVWYDPDPMSTIIEEDVDFVKSYYEMPD 2541
YLK EV KTKE+AKNVQCALEYTTLRSVTEATEVWYDPDPMSTIIEEDVDFV+SYYEMPD
Sbjct: 1141 YLKHEVNKTKEKAKNVQCALEYTTLRSVTEATEVWYDPDPMSTIIEEDVDFVRSYYEMPD 1200
Query: 2540 EDISPDRISPWLLRIELNREMMVDKKLSMADIAEKINHEFKDDITCIFNDDNAEKLILRI 2361
E+++P++ISPWLLRIELNREMMVDKKLSMADIAEKIN EF DD+TCIFNDDNAEKLILRI
Sbjct: 1201 EEVAPEKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRI 1260
Query: 2360 RIMNDDAPKGEMEDATVEDDAFLKQIESNMLTDMSLRGIPDINKVFIKSVKINKFDENEG 2181
RIMND+APKGE++D + EDD FLK+IESNMLT+M+LRGIPDINKVFIKS KINKFDENEG
Sbjct: 1261 RIMNDEAPKGELQDESSEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKINKFDENEG 1320
Query: 2180 FTPSQEWMLDTEGVNMLAVMCHEDVDASRTTSNHLIEVIEVLGIEAVRKALLDELRVVIS 2001
F P EWMLDTEGVN+LAVMC+E+VDA+RTTSNHLIEVI+VLGIEAVR+ALLDELRVVIS
Sbjct: 1321 FKPEIEWMLDTEGVNLLAVMCNEEVDATRTTSNHLIEVIQVLGIEAVRRALLDELRVVIS 1380
Query: 2000 FDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAMFAE 1821
FDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAA++AE
Sbjct: 1381 FDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAE 1440
Query: 1820 SDYLRGVTENIMLGQLAPIGTGVCSLYLDDKMLQQAIELQLPSYMEGVDFAMSPSMSPVL 1641
+D+LRGVTENIMLGQLAPIGTG C+LYL+D+MLQQAIELQLPSYMEG+DF M+PS SP+
Sbjct: 1441 ADHLRGVTENIMLGQLAPIGTGDCALYLNDQMLQQAIELQLPSYMEGMDFGMTPSRSPMT 1500
Query: 1640 -SPNHDPMMSPSYLFSPNMHSSPIADAQFSPYVGGMAF 1530
+P H+ MMSP YL SPNM SSPI DAQFSPYVGGMAF
Sbjct: 1501 GTPYHEGMMSP-YLLSPNMRSSPITDAQFSPYVGGMAF 1537
>XP_002285900.1 PREDICTED: DNA-directed RNA polymerase II subunit 1 [Vitis vinifera]
Length = 1848
Score = 2712 bits (7030), Expect = 0.0
Identities = 1326/1538 (86%), Positives = 1441/1538 (93%), Gaps = 1/1538 (0%)
Frame = -2
Query: 6140 MDTRFPFSPAEVAKVKMVQFGIISPDEIRQMSVAQIEHSEIYDNGKPRTGGLSDPRLGTI 5961
MD RFP+SPAEVAKV+MVQFGI+SPDEIRQMSV QIEHSE + GKP+ GGLSDPRLGTI
Sbjct: 1 MDMRFPYSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHSETTERGKPKPGGLSDPRLGTI 60
Query: 5960 DRKLKCESCAAGMAECPGHFGHLELAKPMYHIGFLKTVLSILRCVCFNCSRILADEEDHR 5781
DRK+KCE+C A MAECPGHFGHLELAKPM+HIGF+KTVLSI+RCVCFNCS+ILADEEDH+
Sbjct: 61 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEEDHK 120
Query: 5780 FKQAMKVKNPKHRLKRVLDCCKNKTKCEGGDSIXXXXXXXXXXEVKKKPHGGCGSQQPKI 5601
FKQA K++NPK+RLK++LD CKNK+KCEGGD I KK GGCG+QQPK+
Sbjct: 121 FKQAQKIRNPKNRLKKILDACKNKSKCEGGDEIETQALDSDEPV--KKSRGGCGAQQPKL 178
Query: 5600 TIDGMKIIAEYRAPRKKADEQDQLMPEPVERKQQLTAERVLNILKRISDEECQMLGFDPQ 5421
TI+GMK+IAEY+ RKK D+ +QL PEPVERKQQL+AERVLN+LKRISDE+C +LG +P+
Sbjct: 179 TIEGMKMIAEYKIQRKKNDDPEQL-PEPVERKQQLSAERVLNVLKRISDEDCILLGLNPK 237
Query: 5420 FARPDWMILQVLXXXXXXXXPSVMMNSTSRSEDDLTHQLAMIIRHNETLKKQEKNGAPAH 5241
+ARPDWMILQVL PSVMM+++SRSEDDLTHQLAMIIRHNE L++QE+NGAPAH
Sbjct: 238 YARPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAH 297
Query: 5240 IVTEFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDF 5061
I++EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDF
Sbjct: 298 IISEFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDF 357
Query: 5060 SARTVITPDPNINIDQLGVPWSIALNLTYPEVVTPYNIERLKELVEYGPHPPPGKTGAKY 4881
SARTVITPDP INID+LGVPWSIALNLTYPE VTPYNIERLKELVEYGPHPPPGKTGAKY
Sbjct: 358 SARTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKY 417
Query: 4880 IIRDDGQRLDLRYLKRSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMP 4701
IIR+DGQRLDLRYLK+SSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMP
Sbjct: 418 IIREDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMP 477
Query: 4700 YSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIV 4521
YSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIV
Sbjct: 478 YSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIV 537
Query: 4520 QDTLLGCRKITKRDTFIEKDVFMNILMWWEEFDGKIPAPTIYKPRPIWTGKQVFNLIIPK 4341
QDTLLGCRKITKRDTFIEKDVFMNILMWWE+FDGKIPAP I KPRP+WTGKQVFNLIIPK
Sbjct: 538 QDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPK 597
Query: 4340 QINLIRYSAWHNESEKGFLTLGDTQVRIEKGEVLCGTLCKKTLGSSSGSLIHVIWEEVGP 4161
QINL+R SAWH+ESE GF+T GDTQVRIEKGE+L GTLCKKTLG+S+GSLIHVIWEEVGP
Sbjct: 598 QINLLRTSAWHSESETGFITPGDTQVRIEKGELLAGTLCKKTLGTSTGSLIHVIWEEVGP 657
Query: 4160 DAARKFLGHTQWLVNYWLLQQGFSMGIGDTIADAATMEKINETISNAKVKVQQLIEKAQE 3981
DAARKFLGHTQWLVNYWLLQ GFS+GIGDTIADAATMEKINETIS AK +V++LI AQE
Sbjct: 658 DAARKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETISKAKNEVKELIRAAQE 717
Query: 3980 KKLEAEPGRTMMESFENQVNQVLNKARDDAGNSAQKSLSESNNLKAMVTAGSKGSFINIS 3801
++LEAEPGRTMMESFEN+VNQVLNKARDDAG+SAQKSLSESNNLKAMVTAGSKGSFINIS
Sbjct: 718 RQLEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINIS 777
Query: 3800 QMTACVGQQNVEGKRIPYGFNGRTLPHFTKDDKGPESRGFVENSYLRGLTPQEFFFHAMG 3621
QMTACVGQQNVEGKRIPYGF RTLPHFTKDD GPESRGFVENSYLRGLTPQEFFFHAMG
Sbjct: 778 QMTACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMG 837
Query: 3620 GREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIE 3441
GREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIE
Sbjct: 838 GREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIE 897
Query: 3440 SQKLDSLKMKRKEFDDTYKYEFDQDSWSPNYMLPVYIEDLKSIREFQNVFNAEVQKLEAD 3261
+QKLDSLKMK+ EFD +KYE D ++W+P+YMLP ++EDLK+IREF+NVF+AEVQKLEAD
Sbjct: 898 TQKLDSLKMKKGEFDRVFKYEIDDENWNPSYMLPEHVEDLKTIREFRNVFDAEVQKLEAD 957
Query: 3260 RRQLGIEIAPSGDNSWPLPVNLKRLIWNGQKLFKIDPRRPSDMHPMEIVEAIDKLQERLR 3081
R QLG EIA +GDNSWP+PVNLKRLIWN QK FK+D RRPSDMHPMEIVEA+DKLQERL+
Sbjct: 958 RFQLGTEIATTGDNSWPMPVNLKRLIWNAQKTFKVDLRRPSDMHPMEIVEAVDKLQERLK 1017
Query: 3080 VVPGDDGLSQEAQKNATLFFNILLRSTLASKRVLKEYHLTKEAFEWIVGEIEARFLQSLV 2901
VVPGDD +S EAQKNATLFFNILLRST ASKRVLKEY LT+EAFEW++GEIE+RFLQSLV
Sbjct: 1018 VVPGDDLISMEAQKNATLFFNILLRSTFASKRVLKEYRLTREAFEWVIGEIESRFLQSLV 1077
Query: 2900 APGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSV 2721
APGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSV
Sbjct: 1078 APGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSV 1137
Query: 2720 YLKPEVGKTKERAKNVQCALEYTTLRSVTEATEVWYDPDPMSTIIEEDVDFVKSYYEMPD 2541
YLKP+V KTKERAKNVQCALEYTTLRSVT+ATEVWYDPDPMSTIIEEDVDFVKSYYEMPD
Sbjct: 1138 YLKPDVSKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVDFVKSYYEMPD 1197
Query: 2540 EDISPDRISPWLLRIELNREMMVDKKLSMADIAEKINHEFKDDITCIFNDDNAEKLILRI 2361
E+++P++ISPWLLRIELNREMMVDKKLSMADIAEKIN EF DD+TCIFNDDNAEKLILRI
Sbjct: 1198 EEVAPEKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRI 1257
Query: 2360 RIMNDDAPKGEMEDATVEDDAFLKQIESNMLTDMSLRGIPDINKVFIKSVKINKFDENEG 2181
RIMND+APKGE++D + EDD FLK+IESNMLT+M+LRGIPDINKVFIKS K+NKFDE+EG
Sbjct: 1258 RIMNDEAPKGELQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKVNKFDESEG 1317
Query: 2180 FTPSQEWMLDTEGVNMLAVMCHEDVDASRTTSNHLIEVIEVLGIEAVRKALLDELRVVIS 2001
F P EWMLDTEGVN+LAVMCHEDVDA RTTSNHLIEVIEVLGIEAVR++LLDELRVVIS
Sbjct: 1318 FKPEVEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVIS 1377
Query: 2000 FDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAMFAE 1821
FDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAA++AE
Sbjct: 1378 FDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAE 1437
Query: 1820 SDYLRGVTENIMLGQLAPIGTGVCSLYLDDKMLQQAIELQLPSYMEGVDFAMSPSMSPVL 1641
+D+LRGVTENIMLGQLAPIGTG C+LYL+D+MLQ AIELQLPSYMEG+DF M+PS SP+
Sbjct: 1438 TDFLRGVTENIMLGQLAPIGTGDCALYLNDQMLQHAIELQLPSYMEGLDFGMTPSRSPIT 1497
Query: 1640 -SPNHDPMMSPSYLFSPNMHSSPIADAQFSPYVGGMAF 1530
+P HD MMSP+YL SPN+ SPI DAQFSPYVGGMAF
Sbjct: 1498 GTPYHDGMMSPNYLLSPNLRLSPITDAQFSPYVGGMAF 1535
>XP_008806151.1 PREDICTED: DNA-directed RNA polymerase II subunit 1 [Phoenix
dactylifera]
Length = 1842
Score = 2705 bits (7012), Expect = 0.0
Identities = 1324/1538 (86%), Positives = 1436/1538 (93%), Gaps = 1/1538 (0%)
Frame = -2
Query: 6140 MDTRFPFSPAEVAKVKMVQFGIISPDEIRQMSVAQIEHSEIYDNGKPRTGGLSDPRLGTI 5961
MD RFP+SPAEVAKV+ VQFGI+SPDEIRQMSV QIEH E + GKP+ GGLSDPRLGTI
Sbjct: 1 MDMRFPYSPAEVAKVRCVQFGILSPDEIRQMSVVQIEHGETMERGKPKPGGLSDPRLGTI 60
Query: 5960 DRKLKCESCAAGMAECPGHFGHLELAKPMYHIGFLKTVLSILRCVCFNCSRILADEEDHR 5781
DRK+KCE+C A MAECPGHFGHLELAKPM+HIGFLKTVL+I+RCVCFNCS+ILADE+D R
Sbjct: 61 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVLAIMRCVCFNCSKILADEDDTR 120
Query: 5780 FKQAMKVKNPKHRLKRVLDCCKNKTKCEGGDSIXXXXXXXXXXEVKKKPHGGCGSQQPKI 5601
FKQA+K++NPKHRLKR+ D CK K KC GGD I +KK GGCG+QQP I
Sbjct: 121 FKQALKIRNPKHRLKRIYDACKTKKKCAGGDDIDVQAQQDSEEPIKKS-RGGCGAQQPNI 179
Query: 5600 TIDGMKIIAEYRAPRKKADEQDQLMPEPVERKQQLTAERVLNILKRISDEECQMLGFDPQ 5421
TIDGMK+IAEY+AP+KK+D+Q+QL PEPVERKQ L+AERVL++LKRISDE+C +LG DP+
Sbjct: 180 TIDGMKMIAEYKAPKKKSDDQEQL-PEPVERKQVLSAERVLSVLKRISDEDCLLLGLDPK 238
Query: 5420 FARPDWMILQVLXXXXXXXXPSVMMNSTSRSEDDLTHQLAMIIRHNETLKKQEKNGAPAH 5241
+ARPDWMILQVL PSVMM+++SRSEDDLTHQLAMIIRHNE L++QE+NGAPAH
Sbjct: 239 YARPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAH 298
Query: 5240 IVTEFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDF 5061
I+TEFAQLLQFH+ATYFDN+LPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDF
Sbjct: 299 IITEFAQLLQFHIATYFDNDLPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDF 358
Query: 5060 SARTVITPDPNINIDQLGVPWSIALNLTYPEVVTPYNIERLKELVEYGPHPPPGKTGAKY 4881
SARTVITPDP INID+LGVPWSIALNLTYPE VTPYNIERLKELVEYGPHPPPGKTGAKY
Sbjct: 359 SARTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKY 418
Query: 4880 IIRDDGQRLDLRYLKRSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMP 4701
IIR+DGQRLDLRYLK+SSDHHLELGYKVERHL DGD+VLFNRQPSLHKMSIMGHRIKIMP
Sbjct: 419 IIREDGQRLDLRYLKKSSDHHLELGYKVERHLMDGDYVLFNRQPSLHKMSIMGHRIKIMP 478
Query: 4700 YSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIV 4521
YSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIV
Sbjct: 479 YSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIV 538
Query: 4520 QDTLLGCRKITKRDTFIEKDVFMNILMWWEEFDGKIPAPTIYKPRPIWTGKQVFNLIIPK 4341
QDTLLGCRKITKRDTFIEKDVFMNILMWWE+FDGKIPAP I KPRP+WTGKQVFNLIIPK
Sbjct: 539 QDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPK 598
Query: 4340 QINLIRYSAWHNESEKGFLTLGDTQVRIEKGEVLCGTLCKKTLGSSSGSLIHVIWEEVGP 4161
QINLIR SAWH+E+E GF+T GDT VRIEKGE+L GTLCK+TLG+S+GSLIHVIWEEVGP
Sbjct: 599 QINLIRTSAWHSEAETGFITPGDTLVRIEKGELLSGTLCKRTLGTSTGSLIHVIWEEVGP 658
Query: 4160 DAARKFLGHTQWLVNYWLLQQGFSMGIGDTIADAATMEKINETISNAKVKVQQLIEKAQE 3981
DAARKFLGHTQWLVNYWLLQ GFS+GIGDTIADAATMEKINETIS AK V++LI+ AQE
Sbjct: 659 DAARKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETISKAKNDVKELIKLAQE 718
Query: 3980 KKLEAEPGRTMMESFENQVNQVLNKARDDAGNSAQKSLSESNNLKAMVTAGSKGSFINIS 3801
K+LEAEPGRTMMESFEN+VNQVLNKARDDAG+SAQKSLSESNNLKAMVTAGSKGSFINIS
Sbjct: 719 KQLEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINIS 778
Query: 3800 QMTACVGQQNVEGKRIPYGFNGRTLPHFTKDDKGPESRGFVENSYLRGLTPQEFFFHAMG 3621
QMTACVGQQNVEGKRIPYGF RTLPHFTKDD GPESRGFVENSYLRGLTPQEFFFHAMG
Sbjct: 779 QMTACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMG 838
Query: 3620 GREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIE 3441
GREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIE
Sbjct: 839 GREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIE 898
Query: 3440 SQKLDSLKMKRKEFDDTYKYEFDQDSWSPNYMLPVYIEDLKSIREFQNVFNAEVQKLEAD 3261
SQKLDSLKMK+ EFD +KYE D D+W+P+YMLP ++EDLK+IREF+NVF+AEVQKLEAD
Sbjct: 899 SQKLDSLKMKKSEFDKGFKYEIDDDNWNPSYMLPEHVEDLKTIREFRNVFDAEVQKLEAD 958
Query: 3260 RRQLGIEIAPSGDNSWPLPVNLKRLIWNGQKLFKIDPRRPSDMHPMEIVEAIDKLQERLR 3081
R QLG EIA +GDN+WPLPVNLKRLIWN QK FKID RRPSDMHPMEIVEAIDKLQERL+
Sbjct: 959 RYQLGTEIATTGDNTWPLPVNLKRLIWNAQKTFKIDLRRPSDMHPMEIVEAIDKLQERLK 1018
Query: 3080 VVPGDDGLSQEAQKNATLFFNILLRSTLASKRVLKEYHLTKEAFEWIVGEIEARFLQSLV 2901
VVPGDD LS EAQKNATLFFNILLRST ASKRVLKEY LT+EAFEW++GEIE+RFLQSLV
Sbjct: 1019 VVPGDDFLSMEAQKNATLFFNILLRSTFASKRVLKEYRLTREAFEWVIGEIESRFLQSLV 1078
Query: 2900 APGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSV 2721
APGEMIGC+AAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSV
Sbjct: 1079 APGEMIGCIAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSV 1138
Query: 2720 YLKPEVGKTKERAKNVQCALEYTTLRSVTEATEVWYDPDPMSTIIEEDVDFVKSYYEMPD 2541
YLKPEV K KE AKNVQCALEYTTLRSVT ATE+WYDPDPMSTIIEEDV+FVKSYYEMPD
Sbjct: 1139 YLKPEVNKKKELAKNVQCALEYTTLRSVTHATEIWYDPDPMSTIIEEDVEFVKSYYEMPD 1198
Query: 2540 EDISPDRISPWLLRIELNREMMVDKKLSMADIAEKINHEFKDDITCIFNDDNAEKLILRI 2361
EDI+P++ISPWLLRIELNREMMVDKKLSMADIAEKINHEF DD+TCIFNDDNA+KLILRI
Sbjct: 1199 EDIAPEKISPWLLRIELNREMMVDKKLSMADIAEKINHEFADDLTCIFNDDNADKLILRI 1258
Query: 2360 RIMNDDAPKGEMEDATVEDDAFLKQIESNMLTDMSLRGIPDINKVFIKSVKINKFDENEG 2181
RIMND+APKGE++D + EDD FLK+IESNMLT+M+LRGIPDINKVFIKS K+N+FD+NEG
Sbjct: 1259 RIMNDEAPKGELQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKVNRFDDNEG 1318
Query: 2180 FTPSQEWMLDTEGVNMLAVMCHEDVDASRTTSNHLIEVIEVLGIEAVRKALLDELRVVIS 2001
F EWMLDTEGVN+LAVMCHEDVDA+RTTSNHLIEVIEVLGIEAVR++LLDELRVVIS
Sbjct: 1319 FKADVEWMLDTEGVNLLAVMCHEDVDATRTTSNHLIEVIEVLGIEAVRRSLLDELRVVIS 1378
Query: 2000 FDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAMFAE 1821
FDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAA++AE
Sbjct: 1379 FDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAE 1438
Query: 1820 SDYLRGVTENIMLGQLAPIGTGVCSLYLDDKMLQQAIELQLPSYMEGVDFAMSPSMSPVL 1641
+DYLRGVTENIMLGQLAPIGTG C+LYL+D+MLQQAIELQLPSYMEG+DF M+PS SP+
Sbjct: 1439 TDYLRGVTENIMLGQLAPIGTGDCALYLNDQMLQQAIELQLPSYMEGLDFGMTPSRSPIS 1498
Query: 1640 -SPNHDPMMSPSYLFSPNMHSSPIADAQFSPYVGGMAF 1530
+P H+ MMSPSYL SPN+ SSPI DAQFSPYVGGMAF
Sbjct: 1499 GTPYHEGMMSPSYLLSPNVRSSPITDAQFSPYVGGMAF 1536
>XP_010935180.1 PREDICTED: DNA-directed RNA polymerase II subunit 1 [Elaeis
guineensis]
Length = 1842
Score = 2703 bits (7007), Expect = 0.0
Identities = 1324/1538 (86%), Positives = 1435/1538 (93%), Gaps = 1/1538 (0%)
Frame = -2
Query: 6140 MDTRFPFSPAEVAKVKMVQFGIISPDEIRQMSVAQIEHSEIYDNGKPRTGGLSDPRLGTI 5961
MD RFP+SPAEVAKV+ VQFGI+SPDEIRQMSV QIEHSE + GKP+ GGLSDPRLGTI
Sbjct: 1 MDMRFPYSPAEVAKVRCVQFGILSPDEIRQMSVVQIEHSETMERGKPKPGGLSDPRLGTI 60
Query: 5960 DRKLKCESCAAGMAECPGHFGHLELAKPMYHIGFLKTVLSILRCVCFNCSRILADEEDHR 5781
DRK+KCE+C A MAECPGHFGHLELAKPM+HIGFLKTVL+I+RCVCFNCS+ILADE+D R
Sbjct: 61 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVLAIMRCVCFNCSKILADEDDAR 120
Query: 5780 FKQAMKVKNPKHRLKRVLDCCKNKTKCEGGDSIXXXXXXXXXXEVKKKPHGGCGSQQPKI 5601
FKQA+K++NPKHRLKR+ D CK K KC GGD I +KK GGCG+QQP I
Sbjct: 121 FKQALKIRNPKHRLKRIYDACKTKKKCAGGDDIDVQAQQDSEEPIKKS-RGGCGAQQPNI 179
Query: 5600 TIDGMKIIAEYRAPRKKADEQDQLMPEPVERKQQLTAERVLNILKRISDEECQMLGFDPQ 5421
TIDGMK+IAEY+AP+KK+D+Q+QL PEPVERKQ L+AERVL++LKRISDE+C +LG P+
Sbjct: 180 TIDGMKMIAEYKAPKKKSDDQEQL-PEPVERKQVLSAERVLSVLKRISDEDCLLLGLSPK 238
Query: 5420 FARPDWMILQVLXXXXXXXXPSVMMNSTSRSEDDLTHQLAMIIRHNETLKKQEKNGAPAH 5241
+ARPDWMILQVL PSVMM+++SRSEDDLTHQLAMIIRHNE L++QE+NGAPAH
Sbjct: 239 YARPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAH 298
Query: 5240 IVTEFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDF 5061
I+TEFAQLLQFH+ATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDF
Sbjct: 299 IITEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDF 358
Query: 5060 SARTVITPDPNINIDQLGVPWSIALNLTYPEVVTPYNIERLKELVEYGPHPPPGKTGAKY 4881
SARTVITPDP INID+LGVPWSIALNLTYPE VTPYNIERLKELVEYGPHPPPGKTGAKY
Sbjct: 359 SARTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKY 418
Query: 4880 IIRDDGQRLDLRYLKRSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMP 4701
IIR+DGQRLDLRYLK+SSDHHLELGYKVERHL DGD+VLFNRQPSLHKMSIMGHRIKIMP
Sbjct: 419 IIREDGQRLDLRYLKKSSDHHLELGYKVERHLMDGDYVLFNRQPSLHKMSIMGHRIKIMP 478
Query: 4700 YSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIV 4521
YSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIV
Sbjct: 479 YSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIV 538
Query: 4520 QDTLLGCRKITKRDTFIEKDVFMNILMWWEEFDGKIPAPTIYKPRPIWTGKQVFNLIIPK 4341
QDTLLGCRKITKRDTFIEKDVFMNILMWWE+FDGKIPAP I KPRP+WTGKQVFNLIIPK
Sbjct: 539 QDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPK 598
Query: 4340 QINLIRYSAWHNESEKGFLTLGDTQVRIEKGEVLCGTLCKKTLGSSSGSLIHVIWEEVGP 4161
QINLIR SAWH+E+E GF+T GDT VRIEKGE+L GTLCKKTLG+S+GSLIHVIWEEVGP
Sbjct: 599 QINLIRTSAWHSEAETGFITPGDTLVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGP 658
Query: 4160 DAARKFLGHTQWLVNYWLLQQGFSMGIGDTIADAATMEKINETISNAKVKVQQLIEKAQE 3981
DAARKFLGHTQWLVNYWLLQ GFS+GIGDTIADAATMEKINETIS AK V++LI+ AQE
Sbjct: 659 DAARKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETISKAKNDVKELIKLAQE 718
Query: 3980 KKLEAEPGRTMMESFENQVNQVLNKARDDAGNSAQKSLSESNNLKAMVTAGSKGSFINIS 3801
K+LEAEPGRTMMESFEN+VNQVLNKARDDAG+SAQKSLSESNNLKAMVTAGSKGSFINIS
Sbjct: 719 KQLEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINIS 778
Query: 3800 QMTACVGQQNVEGKRIPYGFNGRTLPHFTKDDKGPESRGFVENSYLRGLTPQEFFFHAMG 3621
QMTACVGQQNVEGKRIPYGF RTLPHFTKDD GPESRGFVENSYLRGLTPQEFFFHAMG
Sbjct: 779 QMTACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMG 838
Query: 3620 GREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIE 3441
GREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIE
Sbjct: 839 GREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIE 898
Query: 3440 SQKLDSLKMKRKEFDDTYKYEFDQDSWSPNYMLPVYIEDLKSIREFQNVFNAEVQKLEAD 3261
SQKLDSLKMK+ +FD +KYE D D+W+P+YMLP ++EDLK+IREF+NVF+AEVQKLEAD
Sbjct: 899 SQKLDSLKMKKSDFDRVFKYEIDDDNWNPSYMLPEHVEDLKTIREFRNVFDAEVQKLEAD 958
Query: 3260 RRQLGIEIAPSGDNSWPLPVNLKRLIWNGQKLFKIDPRRPSDMHPMEIVEAIDKLQERLR 3081
R QLG EIA +GDN+WPLPVNLKRLIWN QK FKID RRPSDMHPMEIVEAIDKLQERL+
Sbjct: 959 RYQLGTEIATTGDNTWPLPVNLKRLIWNAQKTFKIDLRRPSDMHPMEIVEAIDKLQERLK 1018
Query: 3080 VVPGDDGLSQEAQKNATLFFNILLRSTLASKRVLKEYHLTKEAFEWIVGEIEARFLQSLV 2901
VVPGDD LS EAQKNATLFFNILLRST ASKRVLKEY LT+EAFEW++GEIE+RFLQSLV
Sbjct: 1019 VVPGDDFLSMEAQKNATLFFNILLRSTFASKRVLKEYRLTREAFEWVIGEIESRFLQSLV 1078
Query: 2900 APGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSV 2721
APGEMIGC+AAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSV
Sbjct: 1079 APGEMIGCIAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSV 1138
Query: 2720 YLKPEVGKTKERAKNVQCALEYTTLRSVTEATEVWYDPDPMSTIIEEDVDFVKSYYEMPD 2541
YLKPEV K KE AKNVQCALEYTTLRSVT ATE+WYDPDPMSTIIEEDV+FVKSYYEMPD
Sbjct: 1139 YLKPEVNKKKELAKNVQCALEYTTLRSVTHATEIWYDPDPMSTIIEEDVEFVKSYYEMPD 1198
Query: 2540 EDISPDRISPWLLRIELNREMMVDKKLSMADIAEKINHEFKDDITCIFNDDNAEKLILRI 2361
EDI+P++ISPWLLRIELNREMMVDKKLSMADIAEKINHEF DD+TCIFNDDNA+KLILRI
Sbjct: 1199 EDIAPEKISPWLLRIELNREMMVDKKLSMADIAEKINHEFADDLTCIFNDDNADKLILRI 1258
Query: 2360 RIMNDDAPKGEMEDATVEDDAFLKQIESNMLTDMSLRGIPDINKVFIKSVKINKFDENEG 2181
RIMND+APKGE++D + EDD FLK+IESNMLT+M+LRGIPDINKVFIKS K+N+FDENEG
Sbjct: 1259 RIMNDEAPKGELQDESAEDDVFLKRIESNMLTEMALRGIPDINKVFIKSGKVNRFDENEG 1318
Query: 2180 FTPSQEWMLDTEGVNMLAVMCHEDVDASRTTSNHLIEVIEVLGIEAVRKALLDELRVVIS 2001
F EWMLDTEGVN+LAVMCHEDVDA+RTTSNHLIEVIEVLGIEAVR++LLDELRVVIS
Sbjct: 1319 FKADVEWMLDTEGVNLLAVMCHEDVDATRTTSNHLIEVIEVLGIEAVRRSLLDELRVVIS 1378
Query: 2000 FDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAMFAE 1821
FDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAA+FAE
Sbjct: 1379 FDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAE 1438
Query: 1820 SDYLRGVTENIMLGQLAPIGTGVCSLYLDDKMLQQAIELQLPSYMEGVDFAMSPSMSPVL 1641
+D+LRGVTENIMLGQLAPIGTG C+LYL+D+MLQQAIELQLPSYMEG++F M+PS SP+
Sbjct: 1439 TDHLRGVTENIMLGQLAPIGTGDCALYLNDQMLQQAIELQLPSYMEGLEFGMTPSRSPIS 1498
Query: 1640 -SPNHDPMMSPSYLFSPNMHSSPIADAQFSPYVGGMAF 1530
+P H+ MMSPSYL SPN+ SSPI DAQFSPYVGGM F
Sbjct: 1499 GTPYHEGMMSPSYLLSPNVRSSPITDAQFSPYVGGMTF 1536
>XP_010266907.1 PREDICTED: DNA-directed RNA polymerase II subunit 1 [Nelumbo
nucifera]
Length = 1848
Score = 2702 bits (7005), Expect = 0.0
Identities = 1322/1538 (85%), Positives = 1441/1538 (93%), Gaps = 1/1538 (0%)
Frame = -2
Query: 6140 MDTRFPFSPAEVAKVKMVQFGIISPDEIRQMSVAQIEHSEIYDNGKPRTGGLSDPRLGTI 5961
MDTRFP+SPAEV+KV+ VQFGI+SPD IRQMSV QIEHSE + GKP+ GGLSD RLGTI
Sbjct: 1 MDTRFPYSPAEVSKVRRVQFGILSPDVIRQMSVVQIEHSETTEKGKPKPGGLSDTRLGTI 60
Query: 5960 DRKLKCESCAAGMAECPGHFGHLELAKPMYHIGFLKTVLSILRCVCFNCSRILADEEDHR 5781
DRK+KCE+C A MAECPGHFGHLELAKPM+HIGF+KTVLSI+RCVCFNCS+ILADEEDH+
Sbjct: 61 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEEDHK 120
Query: 5780 FKQAMKVKNPKHRLKRVLDCCKNKTKCEGGDSIXXXXXXXXXXEVKKKPHGGCGSQQPKI 5601
FKQA +++NPK+RLK+VLD CKNKTKCEGGD I KK GGCG+QQPK+
Sbjct: 121 FKQAQRIRNPKNRLKKVLDACKNKTKCEGGDEIEVQGQDTGEPI--KKRRGGCGAQQPKL 178
Query: 5600 TIDGMKIIAEYRAPRKKADEQDQLMPEPVERKQQLTAERVLNILKRISDEECQMLGFDPQ 5421
TI+GMK+IAEY+A RKK D+Q+QL PEPVERKQQL+AERVL++LKRISDE+C +LG +P+
Sbjct: 179 TIEGMKMIAEYKAQRKKNDDQEQL-PEPVERKQQLSAERVLSVLKRISDEDCILLGLNPE 237
Query: 5420 FARPDWMILQVLXXXXXXXXPSVMMNSTSRSEDDLTHQLAMIIRHNETLKKQEKNGAPAH 5241
+ARPDWMILQVL PSVMM+++SRSEDDLTHQLAMIIRHNE L++QE+NGAPAH
Sbjct: 238 YARPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAH 297
Query: 5240 IVTEFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDF 5061
I++EFAQLLQFH+ATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDF
Sbjct: 298 IISEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDF 357
Query: 5060 SARTVITPDPNINIDQLGVPWSIALNLTYPEVVTPYNIERLKELVEYGPHPPPGKTGAKY 4881
SARTVITPDP INID+LGVPWSIALNLTYPE VTPYNIERLKELVEYGPHPPPGKTGAKY
Sbjct: 358 SARTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKY 417
Query: 4880 IIRDDGQRLDLRYLKRSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMP 4701
IIR+DGQRLDLRYLK+SSDHHLELGYKVERHL DGDFVLFNRQPSLHKMSIMGHRIKIMP
Sbjct: 418 IIREDGQRLDLRYLKKSSDHHLELGYKVERHLQDGDFVLFNRQPSLHKMSIMGHRIKIMP 477
Query: 4700 YSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIV 4521
YSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIV
Sbjct: 478 YSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIV 537
Query: 4520 QDTLLGCRKITKRDTFIEKDVFMNILMWWEEFDGKIPAPTIYKPRPIWTGKQVFNLIIPK 4341
QDTLLGCRKITKRDTFIEKDVFMNILMWWE+FDGKIPAP I KPRP+WTGKQVFNLIIPK
Sbjct: 538 QDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPK 597
Query: 4340 QINLIRYSAWHNESEKGFLTLGDTQVRIEKGEVLCGTLCKKTLGSSSGSLIHVIWEEVGP 4161
QINL+R SAWH+ESE GF+T GDTQVRIE+GE+L GTLCKKTLG+S+GSLIHVIWEEVGP
Sbjct: 598 QINLMRTSAWHSESETGFITPGDTQVRIERGELLTGTLCKKTLGTSTGSLIHVIWEEVGP 657
Query: 4160 DAARKFLGHTQWLVNYWLLQQGFSMGIGDTIADAATMEKINETISNAKVKVQQLIEKAQE 3981
DAARKFLGHTQWLVNYWLLQ GFS+GIGDTIADAATMEKINETIS AK +V++LI AQE
Sbjct: 658 DAARKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETISKAKNEVKELIRAAQE 717
Query: 3980 KKLEAEPGRTMMESFENQVNQVLNKARDDAGNSAQKSLSESNNLKAMVTAGSKGSFINIS 3801
++LEAEPGRTMMESFEN+VNQVLNKARDDAG+SAQKSLSESNNLKAMVTAGSKGSFINIS
Sbjct: 718 RQLEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINIS 777
Query: 3800 QMTACVGQQNVEGKRIPYGFNGRTLPHFTKDDKGPESRGFVENSYLRGLTPQEFFFHAMG 3621
QMTACVGQQNVEGKRIPYGF RTLPHFTKDD GPESRGFVENSYLRGLTPQEFFFHAMG
Sbjct: 778 QMTACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMG 837
Query: 3620 GREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIE 3441
GREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIE
Sbjct: 838 GREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIE 897
Query: 3440 SQKLDSLKMKRKEFDDTYKYEFDQDSWSPNYMLPVYIEDLKSIREFQNVFNAEVQKLEAD 3261
+QKLDSLKM++ EFD ++YE D ++W+P+YMLP ++EDLK+IREF+NVF+AEVQKLEAD
Sbjct: 898 TQKLDSLKMRKSEFDKVFRYEIDDENWNPSYMLPEHVEDLKTIREFRNVFDAEVQKLEAD 957
Query: 3260 RRQLGIEIAPSGDNSWPLPVNLKRLIWNGQKLFKIDPRRPSDMHPMEIVEAIDKLQERLR 3081
R QLG EIA +GDN+WP+PVNLKRLIWN QK FK+D RRPSDMHPMEIVEA+DKLQERL+
Sbjct: 958 RYQLGTEIATTGDNNWPMPVNLKRLIWNAQKTFKVDLRRPSDMHPMEIVEAVDKLQERLK 1017
Query: 3080 VVPGDDGLSQEAQKNATLFFNILLRSTLASKRVLKEYHLTKEAFEWIVGEIEARFLQSLV 2901
VVPGDD LS EAQKNATLFFNILLRST ASKRVLKEY LT+EAFEW++GEIE+RFLQSLV
Sbjct: 1018 VVPGDDFLSMEAQKNATLFFNILLRSTFASKRVLKEYRLTREAFEWVIGEIESRFLQSLV 1077
Query: 2900 APGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSV 2721
APGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSV
Sbjct: 1078 APGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSV 1137
Query: 2720 YLKPEVGKTKERAKNVQCALEYTTLRSVTEATEVWYDPDPMSTIIEEDVDFVKSYYEMPD 2541
YLKPEV KTKERAKNVQCALEYTTLRSVT+ATEVWYDPDPMSTIIEEDVDFVKSYYEMPD
Sbjct: 1138 YLKPEVNKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVDFVKSYYEMPD 1197
Query: 2540 EDISPDRISPWLLRIELNREMMVDKKLSMADIAEKINHEFKDDITCIFNDDNAEKLILRI 2361
E+++P++ISPWLLRIELNREMMVDKKLSMADIAEKIN EF DD+TCIFNDDNAEKLILRI
Sbjct: 1198 EEVAPEKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRI 1257
Query: 2360 RIMNDDAPKGEMEDATVEDDAFLKQIESNMLTDMSLRGIPDINKVFIKSVKINKFDENEG 2181
RIMND+APKGE++D + EDD FLK+IESNMLT+M+LRGIPDINKVFIKS K+NKFDE+EG
Sbjct: 1258 RIMNDEAPKGELQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKVNKFDESEG 1317
Query: 2180 FTPSQEWMLDTEGVNMLAVMCHEDVDASRTTSNHLIEVIEVLGIEAVRKALLDELRVVIS 2001
F P EWMLDTEGVN+LAVMCHEDVDA+RTTSNHLIEVIEVLGIEAVR+ALLDELRVVIS
Sbjct: 1318 FKPEVEWMLDTEGVNLLAVMCHEDVDATRTTSNHLIEVIEVLGIEAVRRALLDELRVVIS 1377
Query: 2000 FDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAMFAE 1821
FDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAA++AE
Sbjct: 1378 FDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAE 1437
Query: 1820 SDYLRGVTENIMLGQLAPIGTGVCSLYLDDKMLQQAIELQLPSYMEGVDFAMSPSMSPVL 1641
+D LRGVTENIMLGQLAPIGTG C+LYL+D+MLQQAIELQLPSYMEG+DF M+PS SP++
Sbjct: 1438 TDCLRGVTENIMLGQLAPIGTGDCALYLNDQMLQQAIELQLPSYMEGLDFGMTPSRSPIM 1497
Query: 1640 -SPNHDPMMSPSYLFSPNMHSSPIADAQFSPYVGGMAF 1530
+P ++ MMSPSYL SPN SPI DAQFSPYVGGMAF
Sbjct: 1498 GTPYNEGMMSPSYLLSPNARLSPITDAQFSPYVGGMAF 1535
>XP_010941355.1 PREDICTED: DNA-directed RNA polymerase II subunit 1-like [Elaeis
guineensis]
Length = 1842
Score = 2696 bits (6988), Expect = 0.0
Identities = 1321/1538 (85%), Positives = 1433/1538 (93%), Gaps = 1/1538 (0%)
Frame = -2
Query: 6140 MDTRFPFSPAEVAKVKMVQFGIISPDEIRQMSVAQIEHSEIYDNGKPRTGGLSDPRLGTI 5961
MD RFP+SPAEVAKV+ VQFGI+SPDEIRQMSVAQIEH E + GKP+ GGLSDPRLGTI
Sbjct: 1 MDVRFPYSPAEVAKVRCVQFGILSPDEIRQMSVAQIEHGETMERGKPKPGGLSDPRLGTI 60
Query: 5960 DRKLKCESCAAGMAECPGHFGHLELAKPMYHIGFLKTVLSILRCVCFNCSRILADEEDHR 5781
DRK+KCE+C A MAECPGHFGHLELAKPM+HIGFLKTVL+I+RCVCFNCS+ILADE+D R
Sbjct: 61 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVLAIMRCVCFNCSKILADEDDAR 120
Query: 5780 FKQAMKVKNPKHRLKRVLDCCKNKTKCEGGDSIXXXXXXXXXXEVKKKPHGGCGSQQPKI 5601
FKQA+K++NPKHRLKR+ D CK+K KC GGD + +KK GGCGSQQP I
Sbjct: 121 FKQALKIRNPKHRLKRISDACKSKKKCAGGDDVDIQAQQDSEEPIKKS-RGGCGSQQPTI 179
Query: 5600 TIDGMKIIAEYRAPRKKADEQDQLMPEPVERKQQLTAERVLNILKRISDEECQMLGFDPQ 5421
TIDGMK++AEY+AP+KK+D+QDQL PEPVERKQ L+A+RVL++LKRISDE+C +LG +PQ
Sbjct: 180 TIDGMKMVAEYKAPKKKSDDQDQL-PEPVERKQILSADRVLSVLKRISDEDCILLGLNPQ 238
Query: 5420 FARPDWMILQVLXXXXXXXXPSVMMNSTSRSEDDLTHQLAMIIRHNETLKKQEKNGAPAH 5241
+ARPDWMILQVL PSVMM+++SRSEDDLTHQLAMIIRHNE L++QE+NGAPAH
Sbjct: 239 YARPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAH 298
Query: 5240 IVTEFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDF 5061
I+TEFAQLLQFH+ATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDF
Sbjct: 299 IITEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDF 358
Query: 5060 SARTVITPDPNINIDQLGVPWSIALNLTYPEVVTPYNIERLKELVEYGPHPPPGKTGAKY 4881
SARTVITPDP INID+LGVPWSIALNLTYPE VTPYNIERLKELVEYGPHPPPGKTGAKY
Sbjct: 359 SARTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKY 418
Query: 4880 IIRDDGQRLDLRYLKRSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMP 4701
IIR+DGQRLDLRYLK+SSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMP
Sbjct: 419 IIREDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMP 478
Query: 4700 YSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIV 4521
YSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIV
Sbjct: 479 YSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIV 538
Query: 4520 QDTLLGCRKITKRDTFIEKDVFMNILMWWEEFDGKIPAPTIYKPRPIWTGKQVFNLIIPK 4341
QDTLLGCRKITKRDTFIE DVFMNILMWWE+FDGKIPAP I KPRP+WTGKQVFNLIIPK
Sbjct: 539 QDTLLGCRKITKRDTFIEMDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPK 598
Query: 4340 QINLIRYSAWHNESEKGFLTLGDTQVRIEKGEVLCGTLCKKTLGSSSGSLIHVIWEEVGP 4161
QINLIR SAWH+E+E GF+T GDT VRIEKGE+L GTLCKKTLG+S+GSLIHVIWEEVGP
Sbjct: 599 QINLIRTSAWHSEAETGFITPGDTLVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGP 658
Query: 4160 DAARKFLGHTQWLVNYWLLQQGFSMGIGDTIADAATMEKINETISNAKVKVQQLIEKAQE 3981
DAARKFLGHTQWLVNYWLLQ GFSMGIGDTIADA TMEKINETIS AK V++LI+ AQE
Sbjct: 659 DAARKFLGHTQWLVNYWLLQNGFSMGIGDTIADAVTMEKINETISKAKNDVKELIKLAQE 718
Query: 3980 KKLEAEPGRTMMESFENQVNQVLNKARDDAGNSAQKSLSESNNLKAMVTAGSKGSFINIS 3801
K+LEAEPGRTMMESFEN+VNQVLNKARDDAG+SAQKSLSESNNLKAMVTAGSKGSFINIS
Sbjct: 719 KQLEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINIS 778
Query: 3800 QMTACVGQQNVEGKRIPYGFNGRTLPHFTKDDKGPESRGFVENSYLRGLTPQEFFFHAMG 3621
QMTACVGQQNVEGKRIPYGF RTLPHFTKDD GPESRGFVENSYLRGLTPQEFFFHAMG
Sbjct: 779 QMTACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMG 838
Query: 3620 GREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIE 3441
GREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIE
Sbjct: 839 GREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIE 898
Query: 3440 SQKLDSLKMKRKEFDDTYKYEFDQDSWSPNYMLPVYIEDLKSIREFQNVFNAEVQKLEAD 3261
SQKLDSLKMK+ EFD ++YE D ++W+P+YMLP ++EDLK+IREF+NVF+AEVQKLEAD
Sbjct: 899 SQKLDSLKMKKSEFDKIFRYEIDDNNWNPSYMLPEHVEDLKTIREFKNVFDAEVQKLEAD 958
Query: 3260 RRQLGIEIAPSGDNSWPLPVNLKRLIWNGQKLFKIDPRRPSDMHPMEIVEAIDKLQERLR 3081
R QLG EI +GDN+WP+PVNLKRLIWN QK FKID RRPSDMHPMEIVEAIDKLQERL+
Sbjct: 959 RYQLGTEIVTTGDNTWPMPVNLKRLIWNAQKTFKIDLRRPSDMHPMEIVEAIDKLQERLK 1018
Query: 3080 VVPGDDGLSQEAQKNATLFFNILLRSTLASKRVLKEYHLTKEAFEWIVGEIEARFLQSLV 2901
VVPGDD LS EAQKNATLFFNILLRST ASKRVLKEY LT+EAFEW++GEIE+RFLQSLV
Sbjct: 1019 VVPGDDFLSMEAQKNATLFFNILLRSTFASKRVLKEYRLTREAFEWVIGEIESRFLQSLV 1078
Query: 2900 APGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSV 2721
APGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSV
Sbjct: 1079 APGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSV 1138
Query: 2720 YLKPEVGKTKERAKNVQCALEYTTLRSVTEATEVWYDPDPMSTIIEEDVDFVKSYYEMPD 2541
YLKPEV K KE AKNVQ ALEYTTLRSVT ATEVWYDPDPMSTIIEEDV+FVKSYYEMPD
Sbjct: 1139 YLKPEVNKKKELAKNVQTALEYTTLRSVTHATEVWYDPDPMSTIIEEDVEFVKSYYEMPD 1198
Query: 2540 EDISPDRISPWLLRIELNREMMVDKKLSMADIAEKINHEFKDDITCIFNDDNAEKLILRI 2361
EDI+P++ISPWLLR+ELNREMMVDKKLSMADIAEKINHEF DITCIFNDDNA+KLILRI
Sbjct: 1199 EDIAPEKISPWLLRVELNREMMVDKKLSMADIAEKINHEFGSDITCIFNDDNADKLILRI 1258
Query: 2360 RIMNDDAPKGEMEDATVEDDAFLKQIESNMLTDMSLRGIPDINKVFIKSVKINKFDENEG 2181
RIMND+APKG+++D + EDD FLK+IESNMLT+M+LRGIPDINKVFIKS K+N+FDE EG
Sbjct: 1259 RIMNDEAPKGDLQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKVNRFDETEG 1318
Query: 2180 FTPSQEWMLDTEGVNMLAVMCHEDVDASRTTSNHLIEVIEVLGIEAVRKALLDELRVVIS 2001
F EWMLDTEGVN+LAVMCHEDVDA+RTTSNHLIEVIEVLGIEAVR+ALLDELRVVIS
Sbjct: 1319 FKADVEWMLDTEGVNLLAVMCHEDVDATRTTSNHLIEVIEVLGIEAVRRALLDELRVVIS 1378
Query: 2000 FDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAMFAE 1821
FDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAA+++E
Sbjct: 1379 FDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYSE 1438
Query: 1820 SDYLRGVTENIMLGQLAPIGTGVCSLYLDDKMLQQAIELQLPSYMEGVDFAMSPSMSPVL 1641
+D+LRGVTENIMLGQLAPIGTG C+LYL+D+MLQQAIELQLPSYMEG+DF M+PS SP+
Sbjct: 1439 ADHLRGVTENIMLGQLAPIGTGDCALYLNDQMLQQAIELQLPSYMEGLDFGMTPSRSPIS 1498
Query: 1640 -SPNHDPMMSPSYLFSPNMHSSPIADAQFSPYVGGMAF 1530
+P H+ MMSPSYL SPN+ SSPI DAQFSPYVGGMAF
Sbjct: 1499 GTPYHEGMMSPSYLLSPNVRSSPITDAQFSPYVGGMAF 1536
>AIO05697.1 DNA-directed RNA polymerase II subunit 1, partial [Cocos nucifera]
Length = 1705
Score = 2694 bits (6983), Expect = 0.0
Identities = 1320/1538 (85%), Positives = 1432/1538 (93%), Gaps = 1/1538 (0%)
Frame = -2
Query: 6140 MDTRFPFSPAEVAKVKMVQFGIISPDEIRQMSVAQIEHSEIYDNGKPRTGGLSDPRLGTI 5961
MDTRFP+SPAEVAKV+ VQFGI+SPDEIRQMSV QIEHSE + GKP+ GGLSDPRLGTI
Sbjct: 1 MDTRFPYSPAEVAKVRCVQFGILSPDEIRQMSVVQIEHSETMERGKPKPGGLSDPRLGTI 60
Query: 5960 DRKLKCESCAAGMAECPGHFGHLELAKPMYHIGFLKTVLSILRCVCFNCSRILADEEDHR 5781
DRK+KCE+C A MAECPGHFGHLELAKPM+HIGFLKTVL+I+RCVCFNCS+ILADE+D R
Sbjct: 61 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVLAIMRCVCFNCSKILADEDDAR 120
Query: 5780 FKQAMKVKNPKHRLKRVLDCCKNKTKCEGGDSIXXXXXXXXXXEVKKKPHGGCGSQQPKI 5601
FKQA+K++NPKHRLKR+ D CK K KC GGD I +KK GGCG+QQP I
Sbjct: 121 FKQALKIRNPKHRLKRIYDACKTKKKCAGGDDIDVQAQQDSEEPMKKS-RGGCGAQQPNI 179
Query: 5600 TIDGMKIIAEYRAPRKKADEQDQLMPEPVERKQQLTAERVLNILKRISDEECQMLGFDPQ 5421
TIDGMK+IAEY+AP+KK+D+Q+QL PEPVERKQ L+AERVL++LKRISDE+C +LG +P+
Sbjct: 180 TIDGMKMIAEYKAPKKKSDDQEQL-PEPVERKQVLSAERVLSVLKRISDEDCLLLGLNPK 238
Query: 5420 FARPDWMILQVLXXXXXXXXPSVMMNSTSRSEDDLTHQLAMIIRHNETLKKQEKNGAPAH 5241
+ARPDWMILQVL PSVMM+++SRSEDDLTHQLAMIIRHNE L++QE+NGAPAH
Sbjct: 239 YARPDWMILQVLPIPLPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAH 298
Query: 5240 IVTEFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDF 5061
I+TEFAQLLQFH+ATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDF
Sbjct: 299 IITEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDF 358
Query: 5060 SARTVITPDPNINIDQLGVPWSIALNLTYPEVVTPYNIERLKELVEYGPHPPPGKTGAKY 4881
SARTVITPDP INID+LGVPWSIALNLTYPE VTPYNIERLKELVEYGPHPPPGKTGAKY
Sbjct: 359 SARTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKY 418
Query: 4880 IIRDDGQRLDLRYLKRSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMP 4701
IIR+DGQRLDLRYLK+SSDHHLELGYKVERHL DGD+VLFNRQPSLHKMSIMGHRIKIMP
Sbjct: 419 IIREDGQRLDLRYLKKSSDHHLELGYKVERHLMDGDYVLFNRQPSLHKMSIMGHRIKIMP 478
Query: 4700 YSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIV 4521
YSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIV
Sbjct: 479 YSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIV 538
Query: 4520 QDTLLGCRKITKRDTFIEKDVFMNILMWWEEFDGKIPAPTIYKPRPIWTGKQVFNLIIPK 4341
QDTLLGCRKITKRDTFIEKDVFMNILMWWE+FDGKIPAP I KPRP+WTGKQVFNLIIPK
Sbjct: 539 QDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPK 598
Query: 4340 QINLIRYSAWHNESEKGFLTLGDTQVRIEKGEVLCGTLCKKTLGSSSGSLIHVIWEEVGP 4161
QINLIR SAWH+E+E GF+T GDT VRIEKG +L GTLCK+TLG+S+GSLIHVIWEEVGP
Sbjct: 599 QINLIRTSAWHSEAETGFITPGDTLVRIEKGXLLSGTLCKRTLGTSTGSLIHVIWEEVGP 658
Query: 4160 DAARKFLGHTQWLVNYWLLQQGFSMGIGDTIADAATMEKINETISNAKVKVQQLIEKAQE 3981
DAARKFLGHTQWLVNYWLLQ GFS+GIGDTIADAATMEKINETIS AK V++LI+ AQE
Sbjct: 659 DAARKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETISKAKNDVKELIKLAQE 718
Query: 3980 KKLEAEPGRTMMESFENQVNQVLNKARDDAGNSAQKSLSESNNLKAMVTAGSKGSFINIS 3801
K+LEAEPGRTMMESFEN+VNQVLNKARDDAG+SAQKSLSESNNLKAMVTAGSKGSFINIS
Sbjct: 719 KQLEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINIS 778
Query: 3800 QMTACVGQQNVEGKRIPYGFNGRTLPHFTKDDKGPESRGFVENSYLRGLTPQEFFFHAMG 3621
QMTACVGQQNVEGKRIPYGF RTLPHFTKDD GPESRGFVENSYLRGLTPQEFFFHAMG
Sbjct: 779 QMTACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMG 838
Query: 3620 GREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIE 3441
GREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIE
Sbjct: 839 GREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIE 898
Query: 3440 SQKLDSLKMKRKEFDDTYKYEFDQDSWSPNYMLPVYIEDLKSIREFQNVFNAEVQKLEAD 3261
SQKLDSLKMK+ EFD +KYE D D+W+P+YMLP ++EDLK+IREF+NVF+AEVQKLEAD
Sbjct: 899 SQKLDSLKMKKSEFDKFFKYEIDDDNWNPSYMLPEHVEDLKTIREFRNVFDAEVQKLEAD 958
Query: 3260 RRQLGIEIAPSGDNSWPLPVNLKRLIWNGQKLFKIDPRRPSDMHPMEIVEAIDKLQERLR 3081
R QLG EIA +GDN+WPLPVNLKRLIWN QK FKID RRPSDMHPMEIVEAIDKLQERL+
Sbjct: 959 RYQLGTEIATTGDNTWPLPVNLKRLIWNAQKTFKIDLRRPSDMHPMEIVEAIDKLQERLK 1018
Query: 3080 VVPGDDGLSQEAQKNATLFFNILLRSTLASKRVLKEYHLTKEAFEWIVGEIEARFLQSLV 2901
VVPGDD LS EAQKNATLFFNILLRST ASKRVLKEY LT+EAFEW++GEIE+RFLQSLV
Sbjct: 1019 VVPGDDFLSMEAQKNATLFFNILLRSTFASKRVLKEYRLTREAFEWVIGEIESRFLQSLV 1078
Query: 2900 APGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSV 2721
APGEMIGC+AAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSV
Sbjct: 1079 APGEMIGCIAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSV 1138
Query: 2720 YLKPEVGKTKERAKNVQCALEYTTLRSVTEATEVWYDPDPMSTIIEEDVDFVKSYYEMPD 2541
YLK EV K KE AKNVQCALEYTTLRSVT ATE+WYDPDPMSTIIEEDV+FVKSYYEMPD
Sbjct: 1139 YLKSEVNKKKELAKNVQCALEYTTLRSVTHATEIWYDPDPMSTIIEEDVEFVKSYYEMPD 1198
Query: 2540 EDISPDRISPWLLRIELNREMMVDKKLSMADIAEKINHEFKDDITCIFNDDNAEKLILRI 2361
EDI+P++ISPWLLRIELNREMMVDKKLSMADIAEKINHEF DD+TCIFNDDNA+KLILRI
Sbjct: 1199 EDIAPEKISPWLLRIELNREMMVDKKLSMADIAEKINHEFADDLTCIFNDDNADKLILRI 1258
Query: 2360 RIMNDDAPKGEMEDATVEDDAFLKQIESNMLTDMSLRGIPDINKVFIKSVKINKFDENEG 2181
RIMND+ PKGE++D + EDD FLK+IESNMLT+M+LRGIPDINKVFIKS K+N+FDEN+G
Sbjct: 1259 RIMNDEGPKGELQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKVNRFDENDG 1318
Query: 2180 FTPSQEWMLDTEGVNMLAVMCHEDVDASRTTSNHLIEVIEVLGIEAVRKALLDELRVVIS 2001
F EWMLDTEGVN+LAVMCHEDVDA+RTTSNHLIEVIEVLGIEAVR++LLDELRVVIS
Sbjct: 1319 FKADVEWMLDTEGVNLLAVMCHEDVDATRTTSNHLIEVIEVLGIEAVRRSLLDELRVVIS 1378
Query: 2000 FDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAMFAE 1821
FDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVD LLDAA+FAE
Sbjct: 1379 FDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDXLLDAAVFAE 1438
Query: 1820 SDYLRGVTENIMLGQLAPIGTGVCSLYLDDKMLQQAIELQLPSYMEGVDFAMSPSMSPVL 1641
+D+LRGVTENIMLGQLAPIGTG C+LYL+D+MLQ AIELQLPSYMEG+DF M+PS SP+
Sbjct: 1439 TDHLRGVTENIMLGQLAPIGTGDCALYLNDQMLQXAIELQLPSYMEGLDFGMTPSRSPIS 1498
Query: 1640 -SPNHDPMMSPSYLFSPNMHSSPIADAQFSPYVGGMAF 1530
+P H+ MMSPSYL SPN+ SSPI DAQFSPYVGGM F
Sbjct: 1499 GTPYHEGMMSPSYLLSPNVRSSPITDAQFSPYVGGMTF 1536
>XP_018807320.1 PREDICTED: DNA-directed RNA polymerase II subunit 1, partial [Juglans
regia]
Length = 1671
Score = 2692 bits (6977), Expect = 0.0
Identities = 1316/1538 (85%), Positives = 1435/1538 (93%), Gaps = 1/1538 (0%)
Frame = -2
Query: 6140 MDTRFPFSPAEVAKVKMVQFGIISPDEIRQMSVAQIEHSEIYDNGKPRTGGLSDPRLGTI 5961
MD RFP+SPAEVAKV+MVQFGI+SPDEIRQMSV QIEHSE + GKP+ GLSDPRLGTI
Sbjct: 1 MDMRFPYSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHSETMERGKPKIAGLSDPRLGTI 60
Query: 5960 DRKLKCESCAAGMAECPGHFGHLELAKPMYHIGFLKTVLSILRCVCFNCSRILADEEDHR 5781
DRK+KCE+C A MAECPGHFGHLELAKPM+HIGF+KTVLSI+RCVCFNCS+ILADEEDH+
Sbjct: 61 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEEDHK 120
Query: 5780 FKQAMKVKNPKHRLKRVLDCCKNKTKCEGGDSIXXXXXXXXXXEVKKKPHGGCGSQQPKI 5601
FKQA+K+KNPK+RLK++LD CKNKTKCEGGD + KK GGCG+QQPK+
Sbjct: 121 FKQALKIKNPKNRLKKILDACKNKTKCEGGDELEVQGQDSEEPV--KKSRGGCGAQQPKL 178
Query: 5600 TIDGMKIIAEYRAPRKKADEQDQLMPEPVERKQQLTAERVLNILKRISDEECQMLGFDPQ 5421
TI+GMK+IAEY+A RKK+D+Q+QL PEPVERKQ LTAERVLN+LKRISDE+CQ+LG +P+
Sbjct: 179 TIEGMKMIAEYKAQRKKSDDQEQL-PEPVERKQTLTAERVLNVLKRISDEDCQLLGLNPK 237
Query: 5420 FARPDWMILQVLXXXXXXXXPSVMMNSTSRSEDDLTHQLAMIIRHNETLKKQEKNGAPAH 5241
+ARPDWMILQVL PSVMM+++SRSEDDLTHQLAMIIRHNE L+KQE+NGAPAH
Sbjct: 238 YARPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRKQERNGAPAH 297
Query: 5240 IVTEFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDF 5061
I++EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDF
Sbjct: 298 IISEFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDF 357
Query: 5060 SARTVITPDPNINIDQLGVPWSIALNLTYPEVVTPYNIERLKELVEYGPHPPPGKTGAKY 4881
SARTVITPDPNINID+LGVPWSIALNLTYPE VTPYNIERLKELVEYGPHPPPGKTGAKY
Sbjct: 358 SARTVITPDPNINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKY 417
Query: 4880 IIRDDGQRLDLRYLKRSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMP 4701
IIRDDGQRLDLRYLK+SSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMP
Sbjct: 418 IIRDDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMP 477
Query: 4700 YSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIV 4521
YSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIV
Sbjct: 478 YSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIV 537
Query: 4520 QDTLLGCRKITKRDTFIEKDVFMNILMWWEEFDGKIPAPTIYKPRPIWTGKQVFNLIIPK 4341
QDTLLGCRKITKRDT I KDVFMNILMWWE+FDGKIPAP I KP P WTGKQVFNLIIPK
Sbjct: 538 QDTLLGCRKITKRDTLISKDVFMNILMWWEDFDGKIPAPAILKPGPYWTGKQVFNLIIPK 597
Query: 4340 QINLIRYSAWHNESEKGFLTLGDTQVRIEKGEVLCGTLCKKTLGSSSGSLIHVIWEEVGP 4161
QINL R SAWH ESE GF+T GDTQVRIE+GE+L GTLCKKTLG+S+GSLIHVIWEEVGP
Sbjct: 598 QINLTRTSAWHLESETGFITPGDTQVRIERGELLAGTLCKKTLGTSTGSLIHVIWEEVGP 657
Query: 4160 DAARKFLGHTQWLVNYWLLQQGFSMGIGDTIADAATMEKINETISNAKVKVQQLIEKAQE 3981
DAARKFLGH QWLVNYWLLQ GFS+GIGDTIADAATME INETIS AK +V++LI KAQ
Sbjct: 658 DAARKFLGHVQWLVNYWLLQNGFSIGIGDTIADAATMETINETISKAKNEVKELIRKAQA 717
Query: 3980 KKLEAEPGRTMMESFENQVNQVLNKARDDAGNSAQKSLSESNNLKAMVTAGSKGSFINIS 3801
++LE EPGRTMM+SFEN+VNQ LN+ARDDAG+SAQKSLSESNNLKAMVTAGSKGSFINIS
Sbjct: 718 RELEPEPGRTMMDSFENKVNQTLNRARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINIS 777
Query: 3800 QMTACVGQQNVEGKRIPYGFNGRTLPHFTKDDKGPESRGFVENSYLRGLTPQEFFFHAMG 3621
QMTACVGQQNVEGKRIPYGF RTLPHFTKDD GPESRGFVENSYLRGLTPQEFFFHAMG
Sbjct: 778 QMTACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMG 837
Query: 3620 GREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIE 3441
GREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIE
Sbjct: 838 GREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIE 897
Query: 3440 SQKLDSLKMKRKEFDDTYKYEFDQDSWSPNYMLPVYIEDLKSIREFQNVFNAEVQKLEAD 3261
SQ+LDSLKMK+ EF+ ++YEFD + W+P+YM+ +IEDLK+IREF+NVF+AEVQKLEAD
Sbjct: 898 SQRLDSLKMKKTEFERVFRYEFDDEQWNPDYMMQEHIEDLKTIREFRNVFDAEVQKLEAD 957
Query: 3260 RRQLGIEIAPSGDNSWPLPVNLKRLIWNGQKLFKIDPRRPSDMHPMEIVEAIDKLQERLR 3081
R QLG EIA +GDNSWPLPVNLKRLIWN QK+FKIDPRR SDMHPMEIVEA+DKLQERL+
Sbjct: 958 RYQLGAEIATTGDNSWPLPVNLKRLIWNAQKIFKIDPRRHSDMHPMEIVEAVDKLQERLK 1017
Query: 3080 VVPGDDGLSQEAQKNATLFFNILLRSTLASKRVLKEYHLTKEAFEWIVGEIEARFLQSLV 2901
VVPG+D LS EAQKNATLFF+ILLRST ASKRVL+EY LT+EAFEW++GEIE+RFLQSLV
Sbjct: 1018 VVPGEDLLSVEAQKNATLFFSILLRSTFASKRVLEEYKLTREAFEWVIGEIESRFLQSLV 1077
Query: 2900 APGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSV 2721
APGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAK+IKTPSLSV
Sbjct: 1078 APGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSV 1137
Query: 2720 YLKPEVGKTKERAKNVQCALEYTTLRSVTEATEVWYDPDPMSTIIEEDVDFVKSYYEMPD 2541
YLKPEV +TKERAKNVQCALEYTTLRSVT+ATEVWYDPDPMSTIIEEDVDFV+SYYEMPD
Sbjct: 1138 YLKPEVCRTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVDFVRSYYEMPD 1197
Query: 2540 EDISPDRISPWLLRIELNREMMVDKKLSMADIAEKINHEFKDDITCIFNDDNAEKLILRI 2361
E+++P++ISPWLLRIELNREMMVDKKLSMADIAEKIN EF DD+TCIFNDDNAEKLILRI
Sbjct: 1198 EEVAPEKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRI 1257
Query: 2360 RIMNDDAPKGEMEDATVEDDAFLKQIESNMLTDMSLRGIPDINKVFIKSVKINKFDENEG 2181
RIMND+APKGE++D + EDD FLK+IESNMLT+M+LRGIPDINKVFIK KINKFDEN+G
Sbjct: 1258 RIMNDEAPKGELQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKQCKINKFDENDG 1317
Query: 2180 FTPSQEWMLDTEGVNMLAVMCHEDVDASRTTSNHLIEVIEVLGIEAVRKALLDELRVVIS 2001
F P QEWMLDTEGVN+LAVMCHEDVD+ RTTSNHLIEVIEVLGIEAVR++LLDELRVVIS
Sbjct: 1318 FKPEQEWMLDTEGVNLLAVMCHEDVDSRRTTSNHLIEVIEVLGIEAVRRSLLDELRVVIS 1377
Query: 2000 FDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAMFAE 1821
FDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAA++AE
Sbjct: 1378 FDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAE 1437
Query: 1820 SDYLRGVTENIMLGQLAPIGTGVCSLYLDDKMLQQAIELQLPSYMEGVDFAMSPSMSPVL 1641
+DYLRGVTENIMLGQLAPIGTG C+LYL+D+ML+ AIELQLPSYM+G+DF M+PS SPV
Sbjct: 1438 TDYLRGVTENIMLGQLAPIGTGDCALYLNDEMLKNAIELQLPSYMDGLDFGMTPSHSPVS 1497
Query: 1640 -SPNHDPMMSPSYLFSPNMHSSPIADAQFSPYVGGMAF 1530
+P H+ +MSPSYL SPN+ SPI DAQFSPYVGGMAF
Sbjct: 1498 GTPYHEGLMSPSYLLSPNLRLSPITDAQFSPYVGGMAF 1535
>XP_006659128.1 PREDICTED: DNA-directed RNA polymerase II subunit 1 [Oryza
brachyantha]
Length = 1855
Score = 2686 bits (6963), Expect = 0.0
Identities = 1307/1538 (84%), Positives = 1434/1538 (93%), Gaps = 1/1538 (0%)
Frame = -2
Query: 6140 MDTRFPFSPAEVAKVKMVQFGIISPDEIRQMSVAQIEHSEIYDNGKPRTGGLSDPRLGTI 5961
MD RFP+SPAEVAKV++VQFGI+SPDEIRQMSV QIEH+E + GKP+ GGLSDPRLGTI
Sbjct: 1 MDARFPYSPAEVAKVQLVQFGILSPDEIRQMSVVQIEHAETMERGKPKPGGLSDPRLGTI 60
Query: 5960 DRKLKCESCAAGMAECPGHFGHLELAKPMYHIGFLKTVLSILRCVCFNCSRILADEEDHR 5781
DRK+KCE+C AGMAECPGHFGHLELAKPM+HIGF+KTVLSI+RCVCFNCS+ILADE+D +
Sbjct: 61 DRKIKCETCMAGMAECPGHFGHLELAKPMFHIGFIKTVLSIMRCVCFNCSKILADEDDTK 120
Query: 5780 FKQAMKVKNPKHRLKRVLDCCKNKTKCEGGDSIXXXXXXXXXXEVKKKPHGGCGSQQPKI 5601
FKQA+K++NPK+RLKR+ D CK+K C GGD + VK++ GGCG+QQP I
Sbjct: 121 FKQALKIRNPKNRLKRIYDACKSKKVCAGGDDLDVQEQQDTDEPVKRR--GGCGAQQPNI 178
Query: 5600 TIDGMKIIAEYRAPRKKADEQDQLMPEPVERKQQLTAERVLNILKRISDEECQMLGFDPQ 5421
T+DGMK++AE++AP+KK D+Q+QL PEPVERKQ L+AERVLN+LKRISDE+C +LG +P+
Sbjct: 179 TVDGMKMVAEFKAPKKKNDDQEQL-PEPVERKQILSAERVLNVLKRISDEDCLLLGLNPK 237
Query: 5420 FARPDWMILQVLXXXXXXXXPSVMMNSTSRSEDDLTHQLAMIIRHNETLKKQEKNGAPAH 5241
FARPDWMILQVL PSVMM+++SRSEDDLTHQLAMIIRHNE L++QE+NGAPAH
Sbjct: 238 FARPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAH 297
Query: 5240 IVTEFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDF 5061
I+TEFAQLLQFH+ATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDF
Sbjct: 298 IITEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDF 357
Query: 5060 SARTVITPDPNINIDQLGVPWSIALNLTYPEVVTPYNIERLKELVEYGPHPPPGKTGAKY 4881
SARTVITPDPNINID+LGVPWSIALNLTYPE VTPYNIERLKELVEYGPHPPPGKTGAKY
Sbjct: 358 SARTVITPDPNINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKY 417
Query: 4880 IIRDDGQRLDLRYLKRSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMP 4701
IIR+DGQRLDLRY+K+SSD HLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMP
Sbjct: 418 IIREDGQRLDLRYVKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMP 477
Query: 4700 YSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIV 4521
YSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIV
Sbjct: 478 YSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIV 537
Query: 4520 QDTLLGCRKITKRDTFIEKDVFMNILMWWEEFDGKIPAPTIYKPRPIWTGKQVFNLIIPK 4341
QDTLLGCRKITKRDT IEKDVFMNILMWWE+FDGK+PAP I KPRPIWTGKQVFNLIIPK
Sbjct: 538 QDTLLGCRKITKRDTLIEKDVFMNILMWWEDFDGKVPAPAILKPRPIWTGKQVFNLIIPK 597
Query: 4340 QINLIRYSAWHNESEKGFLTLGDTQVRIEKGEVLCGTLCKKTLGSSSGSLIHVIWEEVGP 4161
INLIR+SAWH+E+E GF+T GDT VRIEKGE+L GTLCKKTLG+S+GSLIHVIWEEVGP
Sbjct: 598 PINLIRFSAWHSEAETGFITPGDTMVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGP 657
Query: 4160 DAARKFLGHTQWLVNYWLLQQGFSMGIGDTIADAATMEKINETISNAKVKVQQLIEKAQE 3981
DAARKFLGHTQWLVNYWLLQ GFS+GIGDTIADAATMEKINETIS AK +V++LI++A +
Sbjct: 658 DAARKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETISTAKNEVKELIKQAHD 717
Query: 3980 KKLEAEPGRTMMESFENQVNQVLNKARDDAGNSAQKSLSESNNLKAMVTAGSKGSFINIS 3801
K LEAEPGRTMMESFEN+VNQVLNKARDDAG+SAQKSLSESNNLKAMVTAGSKGSFINIS
Sbjct: 718 KHLEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINIS 777
Query: 3800 QMTACVGQQNVEGKRIPYGFNGRTLPHFTKDDKGPESRGFVENSYLRGLTPQEFFFHAMG 3621
QMTACVGQQNVEGKRIP+GF RTLPHFTKDD GPESRGFVENSYLRGLTPQEFFFHAMG
Sbjct: 778 QMTACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMG 837
Query: 3620 GREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIE 3441
GREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIE
Sbjct: 838 GREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIE 897
Query: 3440 SQKLDSLKMKRKEFDDTYKYEFDQDSWSPNYMLPVYIEDLKSIREFQNVFNAEVQKLEAD 3261
SQKLDSLKMK+ EFD ++YE D ++W PNYMLP ++EDLK+IREF+NVF AEVQKLEAD
Sbjct: 898 SQKLDSLKMKKGEFDTVFRYELDDENWRPNYMLPEHVEDLKTIREFRNVFEAEVQKLEAD 957
Query: 3260 RRQLGIEIAPSGDNSWPLPVNLKRLIWNGQKLFKIDPRRPSDMHPMEIVEAIDKLQERLR 3081
R QLG EIA +GDN+WP+PVNLKRLIWN QK FKID RRPSDMHPMEIVEAIDKLQERL+
Sbjct: 958 RFQLGTEIATTGDNTWPMPVNLKRLIWNAQKTFKIDLRRPSDMHPMEIVEAIDKLQERLK 1017
Query: 3080 VVPGDDGLSQEAQKNATLFFNILLRSTLASKRVLKEYHLTKEAFEWIVGEIEARFLQSLV 2901
VVPGDD +S EAQKNATLFFNILLRST ASKRVLKEY LTKEAFEW++GEIE+RFLQSLV
Sbjct: 1018 VVPGDDAMSIEAQKNATLFFNILLRSTFASKRVLKEYRLTKEAFEWVIGEIESRFLQSLV 1077
Query: 2900 APGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSV 2721
APGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSV
Sbjct: 1078 APGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSV 1137
Query: 2720 YLKPEVGKTKERAKNVQCALEYTTLRSVTEATEVWYDPDPMSTIIEEDVDFVKSYYEMPD 2541
YLKPEV K KE AKNVQCALEYTTLRSVT ATE+WYDPDP+ TIIEEDV+FV+SYYEMPD
Sbjct: 1138 YLKPEVNKKKELAKNVQCALEYTTLRSVTHATEIWYDPDPLGTIIEEDVEFVRSYYEMPD 1197
Query: 2540 EDISPDRISPWLLRIELNREMMVDKKLSMADIAEKINHEFKDDITCIFNDDNAEKLILRI 2361
ED+ PD+ISPWLLRIELNREMMVDKKLSMADIAEKINHEF DD++CIFNDDNA+KLILR+
Sbjct: 1198 EDVDPDKISPWLLRIELNREMMVDKKLSMADIAEKINHEFDDDLSCIFNDDNADKLILRV 1257
Query: 2360 RIMNDDAPKGEMEDATVEDDAFLKQIESNMLTDMSLRGIPDINKVFIKSVKINKFDENEG 2181
RI ND+APKGE++D + EDD FLK+IESNMLT+M+LRGIPDINKVFIK K+NKF++N+G
Sbjct: 1258 RITNDEAPKGEIQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKYGKVNKFEDNDG 1317
Query: 2180 FTPSQEWMLDTEGVNMLAVMCHEDVDASRTTSNHLIEVIEVLGIEAVRKALLDELRVVIS 2001
F P EWMLDTEGVN+LAVMCHEDVDA+RTTSNHLIEVIEVLGIEAVR+ALLDELRVVIS
Sbjct: 1318 FKPDNEWMLDTEGVNLLAVMCHEDVDATRTTSNHLIEVIEVLGIEAVRRALLDELRVVIS 1377
Query: 2000 FDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAMFAE 1821
FDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGP+MRCSFEETVDILLDAA++AE
Sbjct: 1378 FDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPLMRCSFEETVDILLDAAVYAE 1437
Query: 1820 SDYLRGVTENIMLGQLAPIGTGVCSLYLDDKMLQQAIELQLPSYMEGVDFAMSPSMSPVL 1641
SDYLRGVTENIMLGQLAPIGTG C+LYL+D+MLQQAIELQLPSY+EG+DF M+P+ SP+
Sbjct: 1438 SDYLRGVTENIMLGQLAPIGTGGCALYLNDQMLQQAIELQLPSYVEGLDFGMTPARSPIS 1497
Query: 1640 -SPNHDPMMSPSYLFSPNMHSSPIADAQFSPYVGGMAF 1530
+P H+ MMSPSYL SPN+ +SPI DAQFSPYVGGMAF
Sbjct: 1498 GTPYHEGMMSPSYLLSPNIRASPITDAQFSPYVGGMAF 1535
>XP_020113244.1 DNA-directed RNA polymerase II subunit 1 [Ananas comosus] OAY68410.1
DNA-directed RNA polymerase II subunit rpb1 [Ananas
comosus]
Length = 1854
Score = 2681 bits (6950), Expect = 0.0
Identities = 1310/1538 (85%), Positives = 1433/1538 (93%), Gaps = 1/1538 (0%)
Frame = -2
Query: 6140 MDTRFPFSPAEVAKVKMVQFGIISPDEIRQMSVAQIEHSEIYDNGKPRTGGLSDPRLGTI 5961
MD RFPFSPAEVAKV+ VQFGI+SPDEIRQMSV QIEHSE + GKP+ GGLSDPRLGTI
Sbjct: 1 MDMRFPFSPAEVAKVRTVQFGILSPDEIRQMSVVQIEHSETMERGKPKPGGLSDPRLGTI 60
Query: 5960 DRKLKCESCAAGMAECPGHFGHLELAKPMYHIGFLKTVLSILRCVCFNCSRILADEEDHR 5781
DRK+KCE+C A MAECPGHFGHLELAKPM+HIGFLKTVL+I+RCVCFNCS+ILADE+D R
Sbjct: 61 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVLAIMRCVCFNCSKILADEDDTR 120
Query: 5780 FKQAMKVKNPKHRLKRVLDCCKNKTKCEGGDSIXXXXXXXXXXEVKKKPHGGCGSQQPKI 5601
FKQA+K++NPK+RLKR+ D CK+K +C GGD I VKK GGCG+QQP I
Sbjct: 121 FKQALKIRNPKNRLKRIYDACKSKKRCAGGDDIDVQGQQDTDEPVKKS-RGGCGAQQPNI 179
Query: 5600 TIDGMKIIAEYRAPRKKADEQDQLMPEPVERKQQLTAERVLNILKRISDEECQMLGFDPQ 5421
T+DGMK++AE++A +KK+D+Q+QL PEPVERKQ L+AERVLN+LKRISDE+C +LG +P+
Sbjct: 180 TVDGMKMVAEFKASKKKSDDQEQL-PEPVERKQILSAERVLNVLKRISDEDCLLLGLNPK 238
Query: 5420 FARPDWMILQVLXXXXXXXXPSVMMNSTSRSEDDLTHQLAMIIRHNETLKKQEKNGAPAH 5241
+ARPDWMILQVL PSVMM+++SRSEDDLTHQLAMIIRHNE L++QE+NGAPAH
Sbjct: 239 YARPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAH 298
Query: 5240 IVTEFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDF 5061
I+TEFAQLLQFH+ATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDF
Sbjct: 299 IITEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDF 358
Query: 5060 SARTVITPDPNINIDQLGVPWSIALNLTYPEVVTPYNIERLKELVEYGPHPPPGKTGAKY 4881
SARTVITPDP INID+LGVPWSIALNLTYPE VTPYNIERLKELVEYGPHPPPGKTGAKY
Sbjct: 359 SARTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKY 418
Query: 4880 IIRDDGQRLDLRYLKRSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMP 4701
IIR+DGQRLDLRYLK+SSD HLELGYKVERHL DGD+VLFNRQPSLHKMSIMGHRIKIMP
Sbjct: 419 IIREDGQRLDLRYLKKSSDQHLELGYKVERHLQDGDYVLFNRQPSLHKMSIMGHRIKIMP 478
Query: 4700 YSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIV 4521
YSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIV
Sbjct: 479 YSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIV 538
Query: 4520 QDTLLGCRKITKRDTFIEKDVFMNILMWWEEFDGKIPAPTIYKPRPIWTGKQVFNLIIPK 4341
QDTLLGCRKITKRDTFIEKDVFMNILMWWE+FDGKIPAP I KPRP+WTGKQVFNLIIPK
Sbjct: 539 QDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPK 598
Query: 4340 QINLIRYSAWHNESEKGFLTLGDTQVRIEKGEVLCGTLCKKTLGSSSGSLIHVIWEEVGP 4161
QINLIR SAWH ESE GF+T GDT VRIEKGE+L GTLCKKTLG+S+GSLIHVIWEEVGP
Sbjct: 599 QINLIRTSAWHLESETGFITPGDTLVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGP 658
Query: 4160 DAARKFLGHTQWLVNYWLLQQGFSMGIGDTIADAATMEKINETISNAKVKVQQLIEKAQE 3981
DAARKFLGHTQWLVNYWLLQ GFS+GIGDTIADAATMEKINETIS AK +V++LI+ AQE
Sbjct: 659 DAARKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETISKAKNEVKELIKLAQE 718
Query: 3980 KKLEAEPGRTMMESFENQVNQVLNKARDDAGNSAQKSLSESNNLKAMVTAGSKGSFINIS 3801
K+LEAEPGRTMMESFEN+VNQVLNKARDDAG+SAQKSLSESNNLKAMVTAGSKGSFINIS
Sbjct: 719 KQLEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINIS 778
Query: 3800 QMTACVGQQNVEGKRIPYGFNGRTLPHFTKDDKGPESRGFVENSYLRGLTPQEFFFHAMG 3621
QMTACVGQQNVEGKRIP+GF GRTLPHFTKDD GPESRGFVENSYLRGLTPQEFFFHAMG
Sbjct: 779 QMTACVGQQNVEGKRIPFGFIGRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMG 838
Query: 3620 GREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIE 3441
GREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIE
Sbjct: 839 GREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIE 898
Query: 3440 SQKLDSLKMKRKEFDDTYKYEFDQDSWSPNYMLPVYIEDLKSIREFQNVFNAEVQKLEAD 3261
SQKLDSLKMK+ EFD+ + YE D +W+P+YMLP +++DLKSI+EF+NVF AEVQKLEAD
Sbjct: 899 SQKLDSLKMKKSEFDNVFTYEIDDPNWNPSYMLPEHVDDLKSIKEFRNVFEAEVQKLEAD 958
Query: 3260 RRQLGIEIAPSGDNSWPLPVNLKRLIWNGQKLFKIDPRRPSDMHPMEIVEAIDKLQERLR 3081
R QLG EIA +GDN+WP+PVNLKRLIWN QK FKID RRPSDMHPMEIVEAIDKLQERL+
Sbjct: 959 RIQLGTEIATTGDNTWPMPVNLKRLIWNAQKTFKIDLRRPSDMHPMEIVEAIDKLQERLK 1018
Query: 3080 VVPGDDGLSQEAQKNATLFFNILLRSTLASKRVLKEYHLTKEAFEWIVGEIEARFLQSLV 2901
VVPGDD +S EAQKNATLFFNILLRST ASKRVLKEY LT+EAFEW++GEIE+RFLQSLV
Sbjct: 1019 VVPGDDLMSIEAQKNATLFFNILLRSTFASKRVLKEYRLTREAFEWVIGEIESRFLQSLV 1078
Query: 2900 APGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSV 2721
APGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSV
Sbjct: 1079 APGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSV 1138
Query: 2720 YLKPEVGKTKERAKNVQCALEYTTLRSVTEATEVWYDPDPMSTIIEEDVDFVKSYYEMPD 2541
YLKPE+ K KE AKNVQCALEYTTLRSVT ATE+WYDPDP+ T+IEEDV+FVKSYYEMPD
Sbjct: 1139 YLKPEINKKKEMAKNVQCALEYTTLRSVTHATEIWYDPDPLGTLIEEDVEFVKSYYEMPD 1198
Query: 2540 EDISPDRISPWLLRIELNREMMVDKKLSMADIAEKINHEFKDDITCIFNDDNAEKLILRI 2361
EDI+P++ISPWLLRIELNREMMVDKKLSMADIAEKINHEF DD+TCIFNDDNA+KLILRI
Sbjct: 1199 EDIAPEKISPWLLRIELNREMMVDKKLSMADIAEKINHEFDDDLTCIFNDDNADKLILRI 1258
Query: 2360 RIMNDDAPKGEMEDATVEDDAFLKQIESNMLTDMSLRGIPDINKVFIKSVKINKFDENEG 2181
RIMND+APKGE++D + EDD FLK+IESNMLT+M+LRGIPDI+KVFIKS K+N+FD++EG
Sbjct: 1259 RIMNDEAPKGELQDESAEDDVFLKKIESNMLTEMALRGIPDIHKVFIKSGKVNRFDKSEG 1318
Query: 2180 FTPSQEWMLDTEGVNMLAVMCHEDVDASRTTSNHLIEVIEVLGIEAVRKALLDELRVVIS 2001
F P EWMLDTEGVN+LAVMCHEDVDA+RTTSNHLIEVIEVLGIEAVR+ALLDELRVVIS
Sbjct: 1319 FKPDVEWMLDTEGVNLLAVMCHEDVDATRTTSNHLIEVIEVLGIEAVRRALLDELRVVIS 1378
Query: 2000 FDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAMFAE 1821
FDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGP+MRCSFEETVDILLDAA++AE
Sbjct: 1379 FDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPLMRCSFEETVDILLDAAVYAE 1438
Query: 1820 SDYLRGVTENIMLGQLAPIGTGVCSLYLDDKMLQQAIELQLPSYMEGVDFAMSPSMSPVL 1641
SD+LRGVTENIMLGQLAPIGTG CSLYL+D+MLQQAIELQLPSY+EG++F M+P+ SP+
Sbjct: 1439 SDHLRGVTENIMLGQLAPIGTGGCSLYLNDQMLQQAIELQLPSYIEGLEFGMTPARSPIS 1498
Query: 1640 -SPNHDPMMSPSYLFSPNMHSSPIADAQFSPYVGGMAF 1530
+P H+ MMSPSY SPN+ SSPI DAQFSPYVGGM F
Sbjct: 1499 GTPYHESMMSPSYFMSPNVRSSPITDAQFSPYVGGMVF 1536
>ONK55404.1 uncharacterized protein A4U43_UnF3880 [Asparagus officinalis]
Length = 1843
Score = 2680 bits (6947), Expect = 0.0
Identities = 1307/1538 (84%), Positives = 1427/1538 (92%), Gaps = 1/1538 (0%)
Frame = -2
Query: 6140 MDTRFPFSPAEVAKVKMVQFGIISPDEIRQMSVAQIEHSEIYDNGKPRTGGLSDPRLGTI 5961
MD RFPFSPAEVAKV+ VQFGI+SPDEIRQMSV Q+EH E + GKP+ GLSDPRLGTI
Sbjct: 1 MDMRFPFSPAEVAKVRTVQFGILSPDEIRQMSVVQVEHGETMERGKPKVAGLSDPRLGTI 60
Query: 5960 DRKLKCESCAAGMAECPGHFGHLELAKPMYHIGFLKTVLSILRCVCFNCSRILADEEDHR 5781
DRK+KCE+C A MAECPGHFGHLELAKPM+HIGF+KTVL+I+RCVCFNCS+ILADE+D R
Sbjct: 61 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLAIMRCVCFNCSKILADEDDVR 120
Query: 5780 FKQAMKVKNPKHRLKRVLDCCKNKTKCEGGDSIXXXXXXXXXXEVKKKPHGGCGSQQPKI 5601
FKQA+K++NPK+RLKR+ D CK+K KC GGD I VKK GGCG+QQP I
Sbjct: 121 FKQALKIRNPKNRLKRIYDACKSKKKCAGGDDIDVQGQQDSDEPVKKS-RGGCGAQQPNI 179
Query: 5600 TIDGMKIIAEYRAPRKKADEQDQLMPEPVERKQQLTAERVLNILKRISDEECQMLGFDPQ 5421
TIDGMK++AEY+A +KK+D+ +QL PEPVERKQQL+AERVL++LKRISDE+C +LG +P+
Sbjct: 180 TIDGMKMVAEYKATKKKSDDPEQL-PEPVERKQQLSAERVLSVLKRISDEDCLLLGLNPK 238
Query: 5420 FARPDWMILQVLXXXXXXXXPSVMMNSTSRSEDDLTHQLAMIIRHNETLKKQEKNGAPAH 5241
+ARPDWMILQVL PSVMM++++RSEDDLTHQLAMIIRHNE L++QE+NGAPAH
Sbjct: 239 YARPDWMILQVLPIPPPPVRPSVMMDTSARSEDDLTHQLAMIIRHNENLRRQERNGAPAH 298
Query: 5240 IVTEFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDF 5061
I+TEFAQLLQFH+ATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDF
Sbjct: 299 IITEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDF 358
Query: 5060 SARTVITPDPNINIDQLGVPWSIALNLTYPEVVTPYNIERLKELVEYGPHPPPGKTGAKY 4881
SARTVITPDP INID+LGVPWSIALNLTYPE VTPYNIERLKELVEYGPHPPPGKTGAKY
Sbjct: 359 SARTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKY 418
Query: 4880 IIRDDGQRLDLRYLKRSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMP 4701
IIR+DGQRLDLRYLK+SSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMP
Sbjct: 419 IIREDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMP 478
Query: 4700 YSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIV 4521
YSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIV
Sbjct: 479 YSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIV 538
Query: 4520 QDTLLGCRKITKRDTFIEKDVFMNILMWWEEFDGKIPAPTIYKPRPIWTGKQVFNLIIPK 4341
QDTLLGCRKITKRDTFIEKDVFMNILMWWE+FDGK+PAP I KPRP+WTGKQVFNLIIPK
Sbjct: 539 QDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPK 598
Query: 4340 QINLIRYSAWHNESEKGFLTLGDTQVRIEKGEVLCGTLCKKTLGSSSGSLIHVIWEEVGP 4161
QINL R SAWH+ESE GF+T GDTQVRIEKGE+L GTLCKKTLG+S+GSLIHVIWEEVGP
Sbjct: 599 QINLSRASAWHSESETGFITPGDTQVRIEKGELLTGTLCKKTLGTSTGSLIHVIWEEVGP 658
Query: 4160 DAARKFLGHTQWLVNYWLLQQGFSMGIGDTIADAATMEKINETISNAKVKVQQLIEKAQE 3981
DAARKFLGHTQWLVNYWLLQ FS+GIGDTIADAATMEKINETIS AK V+ LI+ AQ+
Sbjct: 659 DAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISKAKNDVKDLIKLAQD 718
Query: 3980 KKLEAEPGRTMMESFENQVNQVLNKARDDAGNSAQKSLSESNNLKAMVTAGSKGSFINIS 3801
K+LE EPGRTMMESFEN+VNQVLNKARDDAG+SAQKSLSESNNLKAMVTAGSKGSFINIS
Sbjct: 719 KQLEPEPGRTMMESFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINIS 778
Query: 3800 QMTACVGQQNVEGKRIPYGFNGRTLPHFTKDDKGPESRGFVENSYLRGLTPQEFFFHAMG 3621
QMTACVGQQNVEGKRIPYGF GRTLPHFTKDD GPESRGFVENSYLRGLTPQEFFFHAMG
Sbjct: 779 QMTACVGQQNVEGKRIPYGFIGRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMG 838
Query: 3620 GREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIE 3441
GREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIE
Sbjct: 839 GREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIE 898
Query: 3440 SQKLDSLKMKRKEFDDTYKYEFDQDSWSPNYMLPVYIEDLKSIREFQNVFNAEVQKLEAD 3261
SQKLDSLKMK+KEF++ Y+YE D + W P+YMLP ++EDLK+I EF+NVF+AEVQKLEAD
Sbjct: 899 SQKLDSLKMKKKEFNNVYRYEIDDNQWDPSYMLPEHVEDLKTIPEFRNVFDAEVQKLEAD 958
Query: 3260 RRQLGIEIAPSGDNSWPLPVNLKRLIWNGQKLFKIDPRRPSDMHPMEIVEAIDKLQERLR 3081
R QLG +IA +GDN+WP+PVNLKRLIWN QK FK+DPRRPSDMHPMEIVEA+DKLQE+LR
Sbjct: 959 RFQLGTDIATTGDNTWPMPVNLKRLIWNAQKTFKVDPRRPSDMHPMEIVEAVDKLQEKLR 1018
Query: 3080 VVPGDDGLSQEAQKNATLFFNILLRSTLASKRVLKEYHLTKEAFEWIVGEIEARFLQSLV 2901
VVPGDD LS EAQKNATL FNILLRST ASKRVLKEY LT+EAFEW++GEIE+RFLQSLV
Sbjct: 1019 VVPGDDFLSMEAQKNATLLFNILLRSTFASKRVLKEYRLTREAFEWVIGEIESRFLQSLV 1078
Query: 2900 APGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSV 2721
APGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSV
Sbjct: 1079 APGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSV 1138
Query: 2720 YLKPEVGKTKERAKNVQCALEYTTLRSVTEATEVWYDPDPMSTIIEEDVDFVKSYYEMPD 2541
+LKPE+ K KE AKNVQCALEYTTLRSVT ATEVWYDP+PMSTIIEEDVDFV SYYEMPD
Sbjct: 1139 FLKPEISKKKELAKNVQCALEYTTLRSVTHATEVWYDPNPMSTIIEEDVDFVNSYYEMPD 1198
Query: 2540 EDISPDRISPWLLRIELNREMMVDKKLSMADIAEKINHEFKDDITCIFNDDNAEKLILRI 2361
E+++P++ISPWLLRIELNREMMVDKKLSMADIAEKINHEF DD+TCIFNDDNAEKLILRI
Sbjct: 1199 EEVAPEKISPWLLRIELNREMMVDKKLSMADIAEKINHEFDDDLTCIFNDDNAEKLILRI 1258
Query: 2360 RIMNDDAPKGEMEDATVEDDAFLKQIESNMLTDMSLRGIPDINKVFIKSVKINKFDENEG 2181
RIMNDDAPKGE++D + EDD FLK+IESNMLT+M+LRGIPDINKVFIKS K+N+FDENEG
Sbjct: 1259 RIMNDDAPKGELQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKVNRFDENEG 1318
Query: 2180 FTPSQEWMLDTEGVNMLAVMCHEDVDASRTTSNHLIEVIEVLGIEAVRKALLDELRVVIS 2001
F P EW LDTEGVN+LAVMCHEDVD +RTTSNHLIEVIEVLGIEAVRK+LLDELRVVIS
Sbjct: 1319 FKPDVEWTLDTEGVNLLAVMCHEDVDPTRTTSNHLIEVIEVLGIEAVRKSLLDELRVVIS 1378
Query: 2000 FDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAMFAE 1821
FDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAA++AE
Sbjct: 1379 FDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAE 1438
Query: 1820 SDYLRGVTENIMLGQLAPIGTGVCSLYLDDKMLQQAIELQLPSYMEGVDFAMSPSMSPVL 1641
+D+LRGVTENIMLGQLAPIGTG C+LYL+D+MLQQAIELQLPSYMEG+DF M+P+ SP+
Sbjct: 1439 ADHLRGVTENIMLGQLAPIGTGGCALYLNDQMLQQAIELQLPSYMEGLDFGMTPARSPIS 1498
Query: 1640 -SPNHDPMMSPSYLFSPNMHSSPIADAQFSPYVGGMAF 1530
+P H+ +MSPSYL SPN+ SSP DAQFSPYV M F
Sbjct: 1499 GTPYHEGIMSPSYLLSPNIRSSPFTDAQFSPYVNNMPF 1536
>KMZ69245.1 DNA-directed RNA polymerase [Zostera marina]
Length = 1841
Score = 2677 bits (6940), Expect = 0.0
Identities = 1313/1538 (85%), Positives = 1425/1538 (92%), Gaps = 1/1538 (0%)
Frame = -2
Query: 6140 MDTRFPFSPAEVAKVKMVQFGIISPDEIRQMSVAQIEHSEIYDNGKPRTGGLSDPRLGTI 5961
MDTRFP+SP+EV+KV+MVQFGII PDEIRQMSV IEH E + GKP+ GLSDP LGTI
Sbjct: 1 MDTRFPYSPSEVSKVQMVQFGIIGPDEIRQMSVVLIEHGETMERGKPKPAGLSDPLLGTI 60
Query: 5960 DRKLKCESCAAGMAECPGHFGHLELAKPMYHIGFLKTVLSILRCVCFNCSRILADEEDHR 5781
DRKLKCE+C A MAECPGHFGHLELAKPM+HIGFLKTVL+I+RCVCFNCS+ILADE+D R
Sbjct: 61 DRKLKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVLAIMRCVCFNCSKILADEDDTR 120
Query: 5780 FKQAMKVKNPKHRLKRVLDCCKNKTKCEGGDSIXXXXXXXXXXEVKKKPHGGCGSQQPKI 5601
FKQA+K++NPKHRLKR+ D CK+K C GD I VKK GCG+QQP I
Sbjct: 121 FKQALKIRNPKHRLKRIYDACKSKKTCAVGDDIDVQDQGDSEEPVKKS-RTGCGAQQPNI 179
Query: 5600 TIDGMKIIAEYRAPRKKADEQDQLMPEPVERKQQLTAERVLNILKRISDEECQMLGFDPQ 5421
TIDGMK++AEY+A +KK D+QDQL PEPVERKQ L+AE+VL++LKRISD++C +LG DP+
Sbjct: 180 TIDGMKMVAEYKAQKKKNDDQDQL-PEPVERKQVLSAEKVLSVLKRISDDDCLLLGLDPK 238
Query: 5420 FARPDWMILQVLXXXXXXXXPSVMMNSTSRSEDDLTHQLAMIIRHNETLKKQEKNGAPAH 5241
+ARPDWMILQVL PSVMM+++SRSEDDLTHQLAMIIRHNE L++QE+NGAPAH
Sbjct: 239 YARPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAH 298
Query: 5240 IVTEFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDF 5061
I++EFAQLLQFH+ATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDF
Sbjct: 299 IISEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDF 358
Query: 5060 SARTVITPDPNINIDQLGVPWSIALNLTYPEVVTPYNIERLKELVEYGPHPPPGKTGAKY 4881
SARTVITPDP INID+LGVPWSIALNLTYPE VTPYNIERLKELVEYGPHPPPGKTGAKY
Sbjct: 359 SARTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKY 418
Query: 4880 IIRDDGQRLDLRYLKRSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMP 4701
IIR+DGQRLDLRYLK+SSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMP
Sbjct: 419 IIREDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMP 478
Query: 4700 YSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIV 4521
YSTFRLNLSVT+PYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIV
Sbjct: 479 YSTFRLNLSVTAPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIV 538
Query: 4520 QDTLLGCRKITKRDTFIEKDVFMNILMWWEEFDGKIPAPTIYKPRPIWTGKQVFNLIIPK 4341
QDTLLGCRKITKRDTFIEKDVFMNILMWWE+FDGKIPAP I KPRP+WTGKQVFNLIIPK
Sbjct: 539 QDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPK 598
Query: 4340 QINLIRYSAWHNESEKGFLTLGDTQVRIEKGEVLCGTLCKKTLGSSSGSLIHVIWEEVGP 4161
QINLIRYSAWH+ESE GF+T GDTQVRIE+GE+L GTLCKKTLG+S+GSLIHVIWEEVGP
Sbjct: 599 QINLIRYSAWHSESESGFITPGDTQVRIERGEILSGTLCKKTLGTSTGSLIHVIWEEVGP 658
Query: 4160 DAARKFLGHTQWLVNYWLLQQGFSMGIGDTIADAATMEKINETISNAKVKVQQLIEKAQE 3981
DAARKFLGHTQWLVNYWLLQQGFS+GIGDTIADA TMEKINETISNAK V+ LI++AQE
Sbjct: 659 DAARKFLGHTQWLVNYWLLQQGFSIGIGDTIADAGTMEKINETISNAKNAVKDLIKQAQE 718
Query: 3980 KKLEAEPGRTMMESFENQVNQVLNKARDDAGNSAQKSLSESNNLKAMVTAGSKGSFINIS 3801
K+LEAEPGRTM ESFEN+VNQVLNKARDDAG+SAQKSLSESNNLKAMVTAGSKGSFINIS
Sbjct: 719 KQLEAEPGRTMTESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINIS 778
Query: 3800 QMTACVGQQNVEGKRIPYGFNGRTLPHFTKDDKGPESRGFVENSYLRGLTPQEFFFHAMG 3621
QMTACVGQQNVEGKRIPYGF RTLPHFTKDD GPESRGFVENSYLRGLTPQEFFFHAMG
Sbjct: 779 QMTACVGQQNVEGKRIPYGFTDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMG 838
Query: 3620 GREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIE 3441
GREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIE
Sbjct: 839 GREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIE 898
Query: 3440 SQKLDSLKMKRKEFDDTYKYEFDQDSWSPNYMLPVYIEDLKSIREFQNVFNAEVQKLEAD 3261
SQKLDSLKMK+ EF++ Y+YE D+W+P YM ++EDLK+I EF+NVF+AEVQKLEAD
Sbjct: 899 SQKLDSLKMKKAEFNNVYRYEIYDDNWNPGYMQSEHVEDLKNIPEFRNVFDAEVQKLEAD 958
Query: 3260 RRQLGIEIAPSGDNSWPLPVNLKRLIWNGQKLFKIDPRRPSDMHPMEIVEAIDKLQERLR 3081
R QLG EI +GDNSWP+PVNL+RL+WN QK F +D RRPSDMHPMEIVEA+DKLQERL+
Sbjct: 959 RYQLGTEITTTGDNSWPMPVNLRRLVWNAQKTFNVDFRRPSDMHPMEIVEAVDKLQERLK 1018
Query: 3080 VVPGDDGLSQEAQKNATLFFNILLRSTLASKRVLKEYHLTKEAFEWIVGEIEARFLQSLV 2901
VVPGDD +S EAQKNATLFFNILLRST ASKRVLKEY LT+EAFEW++GEIE+RFLQSLV
Sbjct: 1019 VVPGDDLMSMEAQKNATLFFNILLRSTFASKRVLKEYRLTREAFEWVIGEIESRFLQSLV 1078
Query: 2900 APGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSV 2721
APGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSV
Sbjct: 1079 APGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSV 1138
Query: 2720 YLKPEVGKTKERAKNVQCALEYTTLRSVTEATEVWYDPDPMSTIIEEDVDFVKSYYEMPD 2541
YLKP V KTKE+AKNVQCALEYTTLRSVTEATEVWYDPDP ST+IEEDV+FVKSYYEMPD
Sbjct: 1139 YLKPGVNKTKEKAKNVQCALEYTTLRSVTEATEVWYDPDPTSTLIEEDVEFVKSYYEMPD 1198
Query: 2540 EDISPDRISPWLLRIELNREMMVDKKLSMADIAEKINHEFKDDITCIFNDDNAEKLILRI 2361
E+++P++ISPWLLRIELNREMMVDKKLSMADIAEKIN EF DD+TCIFNDDNAEKLILRI
Sbjct: 1199 EEVAPEKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRI 1258
Query: 2360 RIMNDDAPKGEMEDATVEDDAFLKQIESNMLTDMSLRGIPDINKVFIKSVKINKFDENEG 2181
RIMNDDAPKGE++D EDD FLK+IESNMLT+M+LRGIPDINKVFIKS KINKFDE EG
Sbjct: 1259 RIMNDDAPKGELQDEAAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKINKFDELEG 1318
Query: 2180 FTPSQEWMLDTEGVNMLAVMCHEDVDASRTTSNHLIEVIEVLGIEAVRKALLDELRVVIS 2001
F P EWMLDTEGVN+LAVMCH+DVDA+RTTSNHLIEVIEV+GIEAVRK+LLDELRVVIS
Sbjct: 1319 FKPDVEWMLDTEGVNLLAVMCHDDVDATRTTSNHLIEVIEVIGIEAVRKSLLDELRVVIS 1378
Query: 2000 FDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAMFAE 1821
FDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAA++AE
Sbjct: 1379 FDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAE 1438
Query: 1820 SDYLRGVTENIMLGQLAPIGTGVCSLYLDDKMLQQAIELQLPSYMEGVDFAMSPSMSPVL 1641
DYLRGVTENIMLGQLAPIGTG C+LYL+D+MLQQAIELQLPSYMEG+DF M+PS SP+
Sbjct: 1439 KDYLRGVTENIMLGQLAPIGTGSCALYLNDQMLQQAIELQLPSYMEGLDFGMTPSHSPI- 1497
Query: 1640 SPNH-DPMMSPSYLFSPNMHSSPIADAQFSPYVGGMAF 1530
SP H D MMSP+YL SPN+ SSPI DAQFSPYVGGMAF
Sbjct: 1498 SPGHLDGMMSPNYLLSPNIRSSPITDAQFSPYVGGMAF 1535
>GAV78585.1 RNA_pol_Rpb1_2 domain-containing protein/RNA_pol_Rpb1_3
domain-containing protein/RNA_pol_Rpb1_7
domain-containing protein/RNA_pol_Rpb1_6
domain-containing protein/RNA_pol_Rpb1_1
domain-containing protein/RNA_pol_Rpb1_5
domain-containing protein/RNA_pol_Rpb1_4
domain-containing protein/RNA_pol_Rpb1_R
domain-containing protein [Cephalotus follicularis]
Length = 1840
Score = 2676 bits (6936), Expect = 0.0
Identities = 1312/1539 (85%), Positives = 1430/1539 (92%), Gaps = 2/1539 (0%)
Frame = -2
Query: 6140 MDTRFPFSPAEVAKVKMVQFGIISPDEIRQMSVAQIEHSEIYDNGKPRTGGLSDPRLGTI 5961
MD RFP+SPAEVAKV+MVQFGI+SPDEIRQMSV IEHSE + GKP+TGGLSDPRLGTI
Sbjct: 1 MDMRFPYSPAEVAKVRMVQFGILSPDEIRQMSVVHIEHSETTERGKPKTGGLSDPRLGTI 60
Query: 5960 DRKLKCESCAAGMAECPGHFGHLELAKPMYHIGFLKTVLSILRCVCFNCSRILADEEDHR 5781
DRK+KCE+C A MAECPGHFGHLELAKPM+HIGF+KTVLSI+R +CFNCS+ILADEEDH+
Sbjct: 61 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRSICFNCSKILADEEDHK 120
Query: 5780 FKQAMKVKNPKHRLKRVLDCCKNKTKCEGGDSIXXXXXXXXXXEVKKKPHGGCGSQQPKI 5601
FKQA+K+KNPK+RLK++LD CKNKTKCEGGD I KK GGCG+QQPK+
Sbjct: 121 FKQALKIKNPKNRLKKILDACKNKTKCEGGDEIDVQGQDTEEPV--KKSRGGCGAQQPKL 178
Query: 5600 TIDGMKIIAEYRAPRKKADEQDQLMPEPVERKQQLTAERVLNILKRISDEECQMLGFDPQ 5421
TI+GMK+IAEY+A RKK D+Q+QL PEPVERKQ LTAERVLNILKRISDE+CQ+LG DP+
Sbjct: 179 TIEGMKMIAEYKAQRKKNDDQEQL-PEPVERKQTLTAERVLNILKRISDEDCQLLGLDPK 237
Query: 5420 FARPDWMILQVLXXXXXXXXPSVMMNSTSRSEDDLTHQLAMIIRHNETLKKQEKNGAPAH 5241
+ARPDWMILQVL PSVMM+++SRSEDDLTHQLAMIIRHNE L+KQE+NG+PAH
Sbjct: 238 YARPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRKQERNGSPAH 297
Query: 5240 IVTEFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDF 5061
I++EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDF
Sbjct: 298 IISEFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDF 357
Query: 5060 SARTVITPDPNINIDQLGVPWSIALNLTYPEVVTPYNIERLKELVEYGPHPPPGKTGAKY 4881
SARTVITPDPNINID+LGVPWSIALNLTYPE VTPYNIERLKELVEYGPHPPPGKTGAKY
Sbjct: 358 SARTVITPDPNINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKY 417
Query: 4880 IIRDDGQRLDLRYLKRSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMP 4701
IIRDDGQRLDLRYLK+SSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMP
Sbjct: 418 IIRDDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMP 477
Query: 4700 YSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIV 4521
YSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIV
Sbjct: 478 YSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIV 537
Query: 4520 QDTLLGCRKITKRDTFIEKDVFMNILMWWEEFDGKIPAPTIYKPRPIWTGKQVFNLIIPK 4341
QDTLLGCRKITKRDTFIEKDVFMNILMWWE+FDGK+PAPTI KPRPIWTGKQVFNLIIPK
Sbjct: 538 QDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPTILKPRPIWTGKQVFNLIIPK 597
Query: 4340 QINLIRYSAWHNESEKGFLTLGDTQVRIEKGEVLCGTLCKKTLGSSSGSLIHVIWEEVGP 4161
QINL+R+SAWHN++E+G LT GDTQVRIEKGE+L GTLCKKTLG+S+GSLIHVIWEEVGP
Sbjct: 598 QINLVRFSAWHNDNERGVLTPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGP 657
Query: 4160 DAARKFLGHTQWLVNYWLLQQGFSMGIGDTIADAATMEKINETISNAKVKVQQLIEKAQE 3981
DAARKFLGHTQWLVNYWLLQ GFS+GIGDTIADAATME INETI+NAK +V+ I +AQ
Sbjct: 658 DAARKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMETINETITNAKNEVKNYIREAQS 717
Query: 3980 KKLEAEPGRTMMESFENQVNQVLNKARDDAGNSAQKSLSESNNLKAMVTAGSKGSFINIS 3801
K LEAEPGRTMMESFEN+VNQVLNKARD+AG+SAQKSLSESNNLKAMVTAGSKGSFINIS
Sbjct: 718 KTLEAEPGRTMMESFENKVNQVLNKARDEAGSSAQKSLSESNNLKAMVTAGSKGSFINIS 777
Query: 3800 QMTACVGQQNVEGKRIPYGFNGRTLPHFTKDDKGPESRGFVENSYLRGLTPQEFFFHAMG 3621
QMTACVGQQNVEGKRIPYGF RTLPHFTKDD GPESRGFVENSYLRGLTPQEFFFHAMG
Sbjct: 778 QMTACVGQQNVEGKRIPYGFLDRTLPHFTKDDNGPESRGFVENSYLRGLTPQEFFFHAMG 837
Query: 3620 GREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIE 3441
GREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIE
Sbjct: 838 GREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIE 897
Query: 3440 SQKLDSLKMKRKEFDDTYKYEFDQDSWSPNYMLPVYIEDLKSIREFQNVFNAEVQKLEAD 3261
SQ LDSLKM + +FD ++YE + +W+P+Y+LP ++EDL++I+E ++VF+AEV KLEAD
Sbjct: 898 SQTLDSLKMVKSDFDRVFRYEINDVNWNPSYILPEHLEDLRNIQELRDVFDAEVHKLEAD 957
Query: 3260 RRQLGIEIAPSGDNSWPLPVNLKRLIWNGQKLFKIDPRRPSDMHPMEIVEAIDKLQERLR 3081
R QLG EIA +GDNSWP+PVNL+RLIWN QK FK+D RRPSDMHP+EIVEAIDKLQERL+
Sbjct: 958 RYQLGTEIATTGDNSWPMPVNLRRLIWNAQKTFKVDLRRPSDMHPVEIVEAIDKLQERLK 1017
Query: 3080 VVPGDDGLSQEAQKNATLFFNILLRSTLASKRVLKEYHLTKEAFEWIVGEIEARFLQSLV 2901
VVPG+D LS EAQKNATLFF ILLRST ASKRVL+EY LT+EAFEW+VGEIE+RFLQSLV
Sbjct: 1018 VVPGEDLLSMEAQKNATLFFGILLRSTFASKRVLQEYRLTREAFEWVVGEIESRFLQSLV 1077
Query: 2900 APGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSV 2721
APGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSV
Sbjct: 1078 APGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSV 1137
Query: 2720 YLKPEVGKTKERAKNVQCALEYTTLRSVTEATEVWYDPDPMSTIIEEDVDFVKSYYEMPD 2541
YL PEV KTKERAKNVQCALEYTTLRSVTEATEVWYDPDPMSTIIEEDV+FVKSYYEMPD
Sbjct: 1138 YLNPEVSKTKERAKNVQCALEYTTLRSVTEATEVWYDPDPMSTIIEEDVEFVKSYYEMPD 1197
Query: 2540 EDISPDRISPWLLRIELNREMMVDKKLSMADIAEKINHEFKDDITCIFNDDNAEKLILRI 2361
E++ P++ISPWLLRIELNREMMVDKKLSMADIAEKIN EF DD+TCIFNDDNAEKLILRI
Sbjct: 1198 EEVVPEKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRI 1257
Query: 2360 RIMNDDAPKGEMEDATVEDDAFLKQIESNMLTDMSLRGIPDINKVFIKSVKINKFDENEG 2181
RIMND+APKGE+ D + EDD FLK+IESNMLT+M+LRGIPDINKVFIK KI +FD++EG
Sbjct: 1258 RIMNDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKKGKITRFDDDEG 1317
Query: 2180 FTP-SQEWMLDTEGVNMLAVMCHEDVDASRTTSNHLIEVIEVLGIEAVRKALLDELRVVI 2004
F +EWMLDTEGVN+LAVMCHEDVDA RTTSNHLIEVIEVLGIEAVR++LLDELRVVI
Sbjct: 1318 FNKHMEEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVI 1377
Query: 2003 SFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAMFA 1824
SFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAA++A
Sbjct: 1378 SFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYA 1437
Query: 1823 ESDYLRGVTENIMLGQLAPIGTGVCSLYLDDKMLQQAIELQLPSYMEGVDFAMSPSMSPV 1644
E DYLRGVTENIMLGQLAPIGTG C+LYL+D+ML+ AIELQLPSYM+G+DF M+P+ SPV
Sbjct: 1438 EKDYLRGVTENIMLGQLAPIGTGDCALYLNDEMLKNAIELQLPSYMDGLDFGMTPARSPV 1497
Query: 1643 L-SPNHDPMMSPSYLFSPNMHSSPIADAQFSPYVGGMAF 1530
+P H+ MMSP YL SPN+ SPI DAQFSPYVGGMAF
Sbjct: 1498 SGTPFHEGMMSPGYLLSPNLRLSPITDAQFSPYVGGMAF 1536
>XP_015649819.1 PREDICTED: DNA-directed RNA polymerase II subunit 1 [Oryza sativa
Japonica Group]
Length = 1855
Score = 2675 bits (6935), Expect = 0.0
Identities = 1304/1538 (84%), Positives = 1431/1538 (93%), Gaps = 1/1538 (0%)
Frame = -2
Query: 6140 MDTRFPFSPAEVAKVKMVQFGIISPDEIRQMSVAQIEHSEIYDNGKPRTGGLSDPRLGTI 5961
MD RFP+SPAEVAKV++VQFGI+SPDEIRQMSV QIEH+E + GKP+ GGLSDPRLGTI
Sbjct: 1 MDARFPYSPAEVAKVQLVQFGILSPDEIRQMSVVQIEHAETMERGKPKPGGLSDPRLGTI 60
Query: 5960 DRKLKCESCAAGMAECPGHFGHLELAKPMYHIGFLKTVLSILRCVCFNCSRILADEEDHR 5781
D+K+KCE+C AGMAECPGHFGHLELAKPM+HIGF+KTVLSI+RCVCFNCS+ILADE+D +
Sbjct: 61 DQKIKCETCMAGMAECPGHFGHLELAKPMFHIGFIKTVLSIMRCVCFNCSKILADEDDTK 120
Query: 5780 FKQAMKVKNPKHRLKRVLDCCKNKTKCEGGDSIXXXXXXXXXXEVKKKPHGGCGSQQPKI 5601
FKQA+K++NPK+RLKR+ D CK+K C GGD + VKK+ GGCG+QQP I
Sbjct: 121 FKQALKIRNPKNRLKRIYDACKSKKVCAGGDDLDVQEQQDTDEPVKKR--GGCGAQQPNI 178
Query: 5600 TIDGMKIIAEYRAPRKKADEQDQLMPEPVERKQQLTAERVLNILKRISDEECQMLGFDPQ 5421
T+DGMK++AE++AP+KK D+Q+QL PEPVERKQ L+AERVLN+LKRISDE+C +LG +P+
Sbjct: 179 TVDGMKMVAEFKAPKKKNDDQEQL-PEPVERKQILSAERVLNVLKRISDEDCLLLGLNPK 237
Query: 5420 FARPDWMILQVLXXXXXXXXPSVMMNSTSRSEDDLTHQLAMIIRHNETLKKQEKNGAPAH 5241
FARPDWMILQVL PSVMM+++SRSEDDLTHQLAMIIRHNE L++QE+NGAPAH
Sbjct: 238 FARPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAH 297
Query: 5240 IVTEFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDF 5061
I+TEFAQLLQFH+ATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDF
Sbjct: 298 IITEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDF 357
Query: 5060 SARTVITPDPNINIDQLGVPWSIALNLTYPEVVTPYNIERLKELVEYGPHPPPGKTGAKY 4881
SARTVITPDPNINID+LGVPWSIALNLTYPE VTPYNIERLKELVEYGPHPPPGKTGAKY
Sbjct: 358 SARTVITPDPNINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKY 417
Query: 4880 IIRDDGQRLDLRYLKRSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMP 4701
IIR+DGQRLDLRY+K+SSD HLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMP
Sbjct: 418 IIREDGQRLDLRYVKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMP 477
Query: 4700 YSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIV 4521
YSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIV
Sbjct: 478 YSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIV 537
Query: 4520 QDTLLGCRKITKRDTFIEKDVFMNILMWWEEFDGKIPAPTIYKPRPIWTGKQVFNLIIPK 4341
QDTLLGCRKITKRDT IEKDVFMNILMWWE+FDGK+PAP I KPRPIWTGKQVFNLIIPK
Sbjct: 538 QDTLLGCRKITKRDTLIEKDVFMNILMWWEDFDGKVPAPAILKPRPIWTGKQVFNLIIPK 597
Query: 4340 QINLIRYSAWHNESEKGFLTLGDTQVRIEKGEVLCGTLCKKTLGSSSGSLIHVIWEEVGP 4161
INLIR+SAWH+E+E GF+T GDT VRIEKGE+L GTLCKKTLG+S+GSLIHVIWEEVGP
Sbjct: 598 PINLIRFSAWHSEAETGFITPGDTMVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGP 657
Query: 4160 DAARKFLGHTQWLVNYWLLQQGFSMGIGDTIADAATMEKINETISNAKVKVQQLIEKAQE 3981
DAARKFLGHTQWLVNYWLLQ GFS+GIGDTIADAATM KINETIS AK V++LI +A +
Sbjct: 658 DAARKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMVKINETISKAKDDVKELIMQAHD 717
Query: 3980 KKLEAEPGRTMMESFENQVNQVLNKARDDAGNSAQKSLSESNNLKAMVTAGSKGSFINIS 3801
K+LEAEPGRTMMESFEN+VNQVLNKARDDAG+SAQKSLSESNNLKAMVTAGSKGSFINIS
Sbjct: 718 KQLEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINIS 777
Query: 3800 QMTACVGQQNVEGKRIPYGFNGRTLPHFTKDDKGPESRGFVENSYLRGLTPQEFFFHAMG 3621
QMTACVGQQNVEGKRIP+GF RTLPHFTKDD GPESRGFVENSYLRGLTPQEFFFHAMG
Sbjct: 778 QMTACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMG 837
Query: 3620 GREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIE 3441
GREGLIDTAVKTSETGYIQRRLVKAMEDI+VKYDGTVRNSLGDVIQFLYGEDGMDAVWIE
Sbjct: 838 GREGLIDTAVKTSETGYIQRRLVKAMEDIIVKYDGTVRNSLGDVIQFLYGEDGMDAVWIE 897
Query: 3440 SQKLDSLKMKRKEFDDTYKYEFDQDSWSPNYMLPVYIEDLKSIREFQNVFNAEVQKLEAD 3261
SQKLDSLKMK+ EFD+ ++YE D ++W PNYMLP +++DLK+IREF+NVF AEVQKLEAD
Sbjct: 898 SQKLDSLKMKKGEFDNVFRYELDDENWRPNYMLPEHVDDLKTIREFRNVFEAEVQKLEAD 957
Query: 3260 RRQLGIEIAPSGDNSWPLPVNLKRLIWNGQKLFKIDPRRPSDMHPMEIVEAIDKLQERLR 3081
R QLG EIA +GDN+WP+PVNLKRLIWN QK FKID RRPSDMHPMEIVEAIDKLQERL+
Sbjct: 958 RFQLGSEIATTGDNTWPMPVNLKRLIWNAQKTFKIDLRRPSDMHPMEIVEAIDKLQERLK 1017
Query: 3080 VVPGDDGLSQEAQKNATLFFNILLRSTLASKRVLKEYHLTKEAFEWIVGEIEARFLQSLV 2901
VVPGDD +S EAQKNATLFFNILLRST ASKRVLKEY LTKEAFEW++GEIE+RFLQSLV
Sbjct: 1018 VVPGDDAMSIEAQKNATLFFNILLRSTFASKRVLKEYRLTKEAFEWVIGEIESRFLQSLV 1077
Query: 2900 APGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSV 2721
APGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSV
Sbjct: 1078 APGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSV 1137
Query: 2720 YLKPEVGKTKERAKNVQCALEYTTLRSVTEATEVWYDPDPMSTIIEEDVDFVKSYYEMPD 2541
YLKPEV K KE AKNVQCALEYTTLRSVT ATE+WYDPDP+ TIIEEDV+FV+SYYEMPD
Sbjct: 1138 YLKPEVNKKKELAKNVQCALEYTTLRSVTHATEIWYDPDPLGTIIEEDVEFVRSYYEMPD 1197
Query: 2540 EDISPDRISPWLLRIELNREMMVDKKLSMADIAEKINHEFKDDITCIFNDDNAEKLILRI 2361
EDI PD+ISPWLLRIELNREMMVDKKLSMADIAEKINHEF DD++CIFNDDNA+KLILR+
Sbjct: 1198 EDIDPDKISPWLLRIELNREMMVDKKLSMADIAEKINHEFDDDLSCIFNDDNADKLILRV 1257
Query: 2360 RIMNDDAPKGEMEDATVEDDAFLKQIESNMLTDMSLRGIPDINKVFIKSVKINKFDENEG 2181
RI ND+APKGE++D + EDD FLK+IESNMLT+M+LRGIPDINKVFIK K+NKF++N G
Sbjct: 1258 RITNDEAPKGEIQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKYGKVNKFEDNVG 1317
Query: 2180 FTPSQEWMLDTEGVNMLAVMCHEDVDASRTTSNHLIEVIEVLGIEAVRKALLDELRVVIS 2001
F EWMLDTEGVN+LAVMCHEDVDA+RTTSNHLIEVIEVLGIEAVR+ALLDELRVVIS
Sbjct: 1318 FKADNEWMLDTEGVNLLAVMCHEDVDATRTTSNHLIEVIEVLGIEAVRRALLDELRVVIS 1377
Query: 2000 FDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAMFAE 1821
FDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGP+MRCSFEETVDILLDAA++AE
Sbjct: 1378 FDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPLMRCSFEETVDILLDAAVYAE 1437
Query: 1820 SDYLRGVTENIMLGQLAPIGTGVCSLYLDDKMLQQAIELQLPSYMEGVDFAMSPSMSPVL 1641
SDYLRGVTENIMLGQLAPIGTG C+LYL+D+MLQQAIELQLPSY+EG+DF M+P+ SP+
Sbjct: 1438 SDYLRGVTENIMLGQLAPIGTGGCALYLNDQMLQQAIELQLPSYVEGLDFGMTPARSPIS 1497
Query: 1640 -SPNHDPMMSPSYLFSPNMHSSPIADAQFSPYVGGMAF 1530
+P H+ MMSPSYL SPN+ +SPI DAQFSPYVGGMAF
Sbjct: 1498 GTPYHEGMMSPSYLLSPNIRASPITDAQFSPYVGGMAF 1535
>XP_015889758.1 PREDICTED: DNA-directed RNA polymerase II subunit 1 [Ziziphus jujuba]
Length = 1851
Score = 2674 bits (6932), Expect = 0.0
Identities = 1310/1538 (85%), Positives = 1428/1538 (92%), Gaps = 1/1538 (0%)
Frame = -2
Query: 6140 MDTRFPFSPAEVAKVKMVQFGIISPDEIRQMSVAQIEHSEIYDNGKPRTGGLSDPRLGTI 5961
MD RFPFSPAE+AKV+MVQFGI+SPDEIRQMSV QIEHSE GKP+ GLSDPRLGTI
Sbjct: 1 MDIRFPFSPAEIAKVRMVQFGILSPDEIRQMSVLQIEHSETMMGGKPKPAGLSDPRLGTI 60
Query: 5960 DRKLKCESCAAGMAECPGHFGHLELAKPMYHIGFLKTVLSILRCVCFNCSRILADEEDHR 5781
DRK+KC++C A MAECPGHFGHLELAKPM+HIGF+KTVLSI+RCVCFNCS+IL DEEDH+
Sbjct: 61 DRKIKCDTCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILVDEEDHK 120
Query: 5780 FKQAMKVKNPKHRLKRVLDCCKNKTKCEGGDSIXXXXXXXXXXEVKKKPHGGCGSQQPKI 5601
FKQA+++KNPK+RLK++LD CKNKTKCEGGD I KK GGCG+QQPK
Sbjct: 121 FKQALRIKNPKNRLKKILDACKNKTKCEGGDEIAVQGQESEEPV--KKSRGGCGAQQPKF 178
Query: 5600 TIDGMKIIAEYRAPRKKADEQDQLMPEPVERKQQLTAERVLNILKRISDEECQMLGFDPQ 5421
+IDGMK+IAEY+A RKK+D+Q+QL PEPVERKQ LTAERVL++LKRISDE+C++LG DP+
Sbjct: 179 SIDGMKMIAEYKAQRKKSDDQEQL-PEPVERKQTLTAERVLSVLKRISDEDCELLGLDPK 237
Query: 5420 FARPDWMILQVLXXXXXXXXPSVMMNSTSRSEDDLTHQLAMIIRHNETLKKQEKNGAPAH 5241
+ARPDWMILQVL PSVMM+++SRSEDDLTHQLAMIIRHNE L++QE+NG+PAH
Sbjct: 238 YARPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGSPAH 297
Query: 5240 IVTEFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDF 5061
I++EFAQLLQFH+ATYFDNELPG PRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDF
Sbjct: 298 IISEFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDF 357
Query: 5060 SARTVITPDPNINIDQLGVPWSIALNLTYPEVVTPYNIERLKELVEYGPHPPPGKTGAKY 4881
SARTVITPDP INID+LGVPWSIALNLTYPE VTPYNIERLKELVEYGPHPPPGKTGAKY
Sbjct: 358 SARTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKY 417
Query: 4880 IIRDDGQRLDLRYLKRSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMP 4701
IIRDDGQRLDLRYLK+SSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMP
Sbjct: 418 IIRDDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMP 477
Query: 4700 YSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIV 4521
YSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKC+VSPQ+NRPVMGIV
Sbjct: 478 YSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCVVSPQSNRPVMGIV 537
Query: 4520 QDTLLGCRKITKRDTFIEKDVFMNILMWWEEFDGKIPAPTIYKPRPIWTGKQVFNLIIPK 4341
QDTLLGCRKITKRDTFIEKDVFMNILMWWE+FDGK+PAP I KP+P+WTGKQVFNLIIPK
Sbjct: 538 QDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPQPLWTGKQVFNLIIPK 597
Query: 4340 QINLIRYSAWHNESEKGFLTLGDTQVRIEKGEVLCGTLCKKTLGSSSGSLIHVIWEEVGP 4161
QINL R S+WH+ESE G +T GDT VRIEKGE+L GTLCKKTLG+S+GSLIHVIWEEVGP
Sbjct: 598 QINLNRTSSWHSESETGHITPGDTFVRIEKGELLFGTLCKKTLGTSTGSLIHVIWEEVGP 657
Query: 4160 DAARKFLGHTQWLVNYWLLQQGFSMGIGDTIADAATMEKINETISNAKVKVQQLIEKAQE 3981
DAARKFLGHTQWLVNYWLLQ FS+GIGDTIADA+TMEKINETI+ AK V++LI KAQ
Sbjct: 658 DAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADASTMEKINETITKAKNDVKELIRKAQA 717
Query: 3980 KKLEAEPGRTMMESFENQVNQVLNKARDDAGNSAQKSLSESNNLKAMVTAGSKGSFINIS 3801
+ LEAEPGRTMMESFEN+VNQVLN+ARDDAG+SAQKSLSESNNLKAMVTAGSKGSFINIS
Sbjct: 718 RDLEAEPGRTMMESFENKVNQVLNRARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINIS 777
Query: 3800 QMTACVGQQNVEGKRIPYGFNGRTLPHFTKDDKGPESRGFVENSYLRGLTPQEFFFHAMG 3621
QMTACVGQQNVEGKRIPYGF RTLPHFTKDD GPESRGFVENSYLRGLTPQEFFFHAMG
Sbjct: 778 QMTACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMG 837
Query: 3620 GREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIE 3441
GREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIE
Sbjct: 838 GREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIE 897
Query: 3440 SQKLDSLKMKRKEFDDTYKYEFDQDSWSPNYMLPVYIEDLKSIREFQNVFNAEVQKLEAD 3261
SQKLDSLKMK+ EFD +KYEFD ++W+PNYM+P +I+DLK+IREF+NVF+AEVQKL+ D
Sbjct: 898 SQKLDSLKMKKTEFDRVFKYEFDDENWNPNYMMPEHIDDLKTIREFRNVFDAEVQKLDTD 957
Query: 3260 RRQLGIEIAPSGDNSWPLPVNLKRLIWNGQKLFKIDPRRPSDMHPMEIVEAIDKLQERLR 3081
R QLG EIA +GDNSWPLPVNLKRLI N QK FKID RR SDMHPMEIVEAIDKLQERL+
Sbjct: 958 RFQLGTEIATTGDNSWPLPVNLKRLIQNAQKTFKIDYRRTSDMHPMEIVEAIDKLQERLK 1017
Query: 3080 VVPGDDGLSQEAQKNATLFFNILLRSTLASKRVLKEYHLTKEAFEWIVGEIEARFLQSLV 2901
VVPGDD LS EAQKNATLFFNILLRST ASKRVL+EY LT+EAFEW++GEIE+RFLQSLV
Sbjct: 1018 VVPGDDLLSVEAQKNATLFFNILLRSTFASKRVLEEYRLTREAFEWVIGEIESRFLQSLV 1077
Query: 2900 APGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSV 2721
APGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAK+IKTPSLSV
Sbjct: 1078 APGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSV 1137
Query: 2720 YLKPEVGKTKERAKNVQCALEYTTLRSVTEATEVWYDPDPMSTIIEEDVDFVKSYYEMPD 2541
YLKPE KTKERAKNVQCALEYTTLRSVT+ATEVWYDPDP ST+IEEDVDFV+SYYEMPD
Sbjct: 1138 YLKPEANKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPTSTLIEEDVDFVRSYYEMPD 1197
Query: 2540 EDISPDRISPWLLRIELNREMMVDKKLSMADIAEKINHEFKDDITCIFNDDNAEKLILRI 2361
E+I+PD+ISPWLLRIELNREMMVDKKLSMADIAEKIN EF DD+TCIFNDDNAEKLILRI
Sbjct: 1198 EEINPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRI 1257
Query: 2360 RIMNDDAPKGEMEDATVEDDAFLKQIESNMLTDMSLRGIPDINKVFIKSVKINKFDENEG 2181
RIMND++PKG+M D + EDD FLK+IESNMLT+M+LRGIPDINKVFIK+ K+NKFDE EG
Sbjct: 1258 RIMNDESPKGDMNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNGKVNKFDEIEG 1317
Query: 2180 FTPSQEWMLDTEGVNMLAVMCHEDVDASRTTSNHLIEVIEVLGIEAVRKALLDELRVVIS 2001
F P EWMLDTEGVN+LAVMCHEDVDA RTTSNHLIEVIEVLGIEAVR++LLDELRVVIS
Sbjct: 1318 FKPETEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVIS 1377
Query: 2000 FDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAMFAE 1821
FDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAA++AE
Sbjct: 1378 FDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAE 1437
Query: 1820 SDYLRGVTENIMLGQLAPIGTGVCSLYLDDKMLQQAIELQLPSYMEGVDFAMSPSMSPVL 1641
DYLRGVTENIMLGQLAPIGTG CSLYL+D+ML+ AIELQLPSYM+G+DF M+PS SPV
Sbjct: 1438 RDYLRGVTENIMLGQLAPIGTGDCSLYLNDEMLKNAIELQLPSYMDGLDFGMTPSRSPVS 1497
Query: 1640 -SPNHDPMMSPSYLFSPNMHSSPIADAQFSPYVGGMAF 1530
+P H+ +MSPSYL SPN+ SPI+DAQFSPYVGGMAF
Sbjct: 1498 GTPYHEGLMSPSYLLSPNLRLSPISDAQFSPYVGGMAF 1535
>XP_011099129.1 PREDICTED: DNA-directed RNA polymerase II subunit 1 [Sesamum indicum]
Length = 1848
Score = 2674 bits (6931), Expect = 0.0
Identities = 1309/1540 (85%), Positives = 1433/1540 (93%), Gaps = 3/1540 (0%)
Frame = -2
Query: 6140 MDTRFPFSPAEVAKVKMVQFGIISPDEIRQMSVAQIEHSEIYDNGKPRTGGLSDPRLGTI 5961
MD RFP+SPAEVAK+++VQFGI+SPDEIRQMSV IEHSE + GKP+ GGLSDPRLGTI
Sbjct: 1 MDLRFPYSPAEVAKIRVVQFGILSPDEIRQMSVVHIEHSETTERGKPKPGGLSDPRLGTI 60
Query: 5960 DRKLKCESCAAGMAECPGHFGHLELAKPMYHIGFLKTVLSILRCVCFNCSRILADEEDHR 5781
DRK+KCE+C A MA+CPGHFGHLELAKPM+HIGF+KTVLSILRCVCFNCS+ILADEED +
Sbjct: 61 DRKMKCETCMANMADCPGHFGHLELAKPMFHIGFMKTVLSILRCVCFNCSKILADEEDPK 120
Query: 5780 FKQAMKVKNPKHRLKRVLDCCKNKTKCEGGDSIXXXXXXXXXXEVKKKPHGGCGSQQPKI 5601
FKQA++++NPK+RLK++LD CKNK+KCEGGD I KK GGCG+QQPKI
Sbjct: 121 FKQALRIRNPKNRLKKILDACKNKSKCEGGDEIDVQGQDTDEPV--KKTRGGCGAQQPKI 178
Query: 5600 TIDGMKIIAEYRAPRKKADEQDQLMPEPVERKQQLTAERVLNILKRISDEECQMLGFDPQ 5421
+IDGMK++AEY+ +KK D+ +Q MPEPVERKQQL+AE+VL+ILKRI+DE+CQ+LG +P+
Sbjct: 179 SIDGMKMVAEYKIQKKKNDDPEQ-MPEPVERKQQLSAEKVLSILKRITDEDCQLLGLNPK 237
Query: 5420 FARPDWMILQVLXXXXXXXXPSVMMNSTSRSEDDLTHQLAMIIRHNETLKKQEKNGAPAH 5241
+ARPDWMILQVL PSVMM+++SRSEDDLTHQLAMIIRHNE LK+QE+NGAPAH
Sbjct: 238 YARPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGAPAH 297
Query: 5240 IVTEFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDF 5061
I++EFAQLLQFH+ATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDF
Sbjct: 298 IISEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDF 357
Query: 5060 SARTVITPDPNINIDQLGVPWSIALNLTYPEVVTPYNIERLKELVEYGPHPPPGKTGAKY 4881
SARTVITPDP INID+LGVPWSIALNLTYPE VTPYNIERLKELVEYGPHPPPGKTGAKY
Sbjct: 358 SARTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKY 417
Query: 4880 IIRDDGQRLDLRYLKRSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMP 4701
IIRDDGQRLDLRYLK+SSD HLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGH+IKIMP
Sbjct: 418 IIRDDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHKIKIMP 477
Query: 4700 YSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIV 4521
YSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIV
Sbjct: 478 YSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIV 537
Query: 4520 QDTLLGCRKITKRDTFIEKDVFMNILMWWEEFDGKIPAPTIYKPRPIWTGKQVFNLIIPK 4341
QDTLLGCRKITKRDTFIEKDVFMNILMWWE+FDGK+PAP I KPRP+WTGKQVFNLIIPK
Sbjct: 538 QDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPK 597
Query: 4340 QINLIRYSAWHNESEKGFLTLGDTQVRIEKGEVLCGTLCKKTLGSSSGSLIHVIWEEVGP 4161
QINL+RYSAWH ESEKGF+T GDTQVRIEKGE+L GTLCKKTLG+S+GSLIHVIWEEVGP
Sbjct: 598 QINLLRYSAWHQESEKGFITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGP 657
Query: 4160 DAARKFLGHTQWLVNYWLLQQGFSMGIGDTIADAATMEKINETISNAKVKVQQLIEKAQE 3981
DAARKFLGHTQWLVNYWLLQ FS+GIGDTIADAATMEKINETISNAK +V++LI AQE
Sbjct: 658 DAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISNAKNEVKELIRAAQE 717
Query: 3980 KKLEAEPGRTMMESFENQVNQVLNKARDDAGNSAQKSLSESNNLKAMVTAGSKGSFINIS 3801
K+LEAEPGRTMMESFEN+VNQVLNKARDDAG+SAQKSLSESNNLKAMVTAGSKGSFINIS
Sbjct: 718 KQLEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINIS 777
Query: 3800 QMTACVGQQNVEGKRIPYGFNGRTLPHFTKDDKGPESRGFVENSYLRGLTPQEFFFHAMG 3621
QMTACVGQQNVEGKRIP+GF RTLPHFTKDD GPESRGFVENSYLRGLTPQEFFFHAMG
Sbjct: 778 QMTACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMG 837
Query: 3620 GREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIE 3441
GREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIE
Sbjct: 838 GREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIE 897
Query: 3440 SQKLDSLKMKRKEFDDTYKYEFDQDSWSPNYMLPVYIEDLKSIREFQNVFNAEVQKLEAD 3261
SQ L+SLK+K+ +F+D Y+YE D +W+PNYMLP +EDLK+IRE ++VF+AEVQKLEAD
Sbjct: 898 SQPLESLKLKKADFNDMYRYEIDNANWNPNYMLPEAVEDLKTIREIRSVFDAEVQKLEAD 957
Query: 3260 RRQLGIEIAPSGDNSWPLPVNLKRLIWNGQKLFKIDPRRPSDMHPMEIVEAIDKLQERLR 3081
R QLG EIA +GDNSWPLPVN++RL+ N QK FK+D RRPSDMHPMEIVEA+DKLQERL+
Sbjct: 958 RYQLGTEIATTGDNSWPLPVNIRRLVLNAQKTFKVDFRRPSDMHPMEIVEAVDKLQERLK 1017
Query: 3080 VVPGDDGLSQEAQKNATLFFNILLRSTLASKRVLKEYHLTKEAFEWIVGEIEARFLQSLV 2901
VV GDD LS EAQKNATLFFNILLRS LASKRVLKEY LT+EAFEW++GEIE+RFLQSLV
Sbjct: 1018 VVVGDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRLTREAFEWVIGEIESRFLQSLV 1077
Query: 2900 APGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSV 2721
APGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSV
Sbjct: 1078 APGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSV 1137
Query: 2720 YLKPEVGKTKERAKNVQCALEYTTLRSVTEATEVWYDPDPMSTIIEEDVDFVKSYYEMPD 2541
YLKP+V KTKERAKNVQCALEYTTLRSVT+ATEVWYDPDPMSTIIEEDV+FVKSYYEMPD
Sbjct: 1138 YLKPDVSKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVEFVKSYYEMPD 1197
Query: 2540 EDISPDRISPWLLRIELNREMMVDKKLSMADIAEKINHEFKDDITCIFNDDNAEKLILRI 2361
E+I PD+ISPWLLRIELNREMMVDKKLSMADIAEKIN EF DD+TCIFNDDNAEKLILRI
Sbjct: 1198 EEIDPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRI 1257
Query: 2360 RIMNDDAPKGEMEDATVEDDAFLKQIESNMLTDMSLRGIPDINKVFIKSVKINKFDENEG 2181
RIMND+APKGE+ D + EDD FLK+IESNMLT+M+LRGIPDINKVFIK+ K+NKFDENEG
Sbjct: 1258 RIMNDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKLNKFDENEG 1317
Query: 2180 FTPSQEWMLDTEGVNMLAVMCHEDVDASRTTSNHLIEVIEVLGIEAVRKALLDELRVVIS 2001
F EWMLDTEGVN+LAVMCHEDVDA RTTSNHLIEVIEVLGIEAVRKALLDELRVVIS
Sbjct: 1318 FKAENEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRKALLDELRVVIS 1377
Query: 2000 FDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAMFAE 1821
FDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAA++AE
Sbjct: 1378 FDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAE 1437
Query: 1820 SDYLRGVTENIMLGQLAPIGTGVCSLYLDDKMLQQAIELQLPSYME--GVDFAMSPSMSP 1647
+D+LRGVTENIMLGQLAPIGTG C+LYL+++ML+QAIE+ LPSYME G++F M+P+ SP
Sbjct: 1438 TDHLRGVTENIMLGQLAPIGTGDCALYLNEEMLKQAIEIPLPSYMEGGGLEFGMTPARSP 1497
Query: 1646 VL-SPNHDPMMSPSYLFSPNMHSSPIADAQFSPYVGGMAF 1530
+ +P HD MMSPSYL SPN+ SP+ DAQFSPYVGGMAF
Sbjct: 1498 LTGTPYHDGMMSPSYLLSPNLRLSPVTDAQFSPYVGGMAF 1537
>XP_004287766.1 PREDICTED: DNA-directed RNA polymerase II subunit 1 [Fragaria vesca
subsp. vesca] XP_011461993.1 PREDICTED: DNA-directed RNA
polymerase II subunit 1 [Fragaria vesca subsp. vesca]
Length = 1842
Score = 2674 bits (6930), Expect = 0.0
Identities = 1308/1538 (85%), Positives = 1426/1538 (92%), Gaps = 1/1538 (0%)
Frame = -2
Query: 6140 MDTRFPFSPAEVAKVKMVQFGIISPDEIRQMSVAQIEHSEIYDNGKPRTGGLSDPRLGTI 5961
MD RFPFSP EVAKV+ VQFGI+SPDEIRQMSV QIEHSE GKP+T GLSDPRLGTI
Sbjct: 1 MDIRFPFSPCEVAKVRRVQFGILSPDEIRQMSVVQIEHSETMLGGKPKTAGLSDPRLGTI 60
Query: 5960 DRKLKCESCAAGMAECPGHFGHLELAKPMYHIGFLKTVLSILRCVCFNCSRILADEEDHR 5781
DRK+KCE+C A MAECPGHFGHLELAKPM+HIGF+KTVLSI+RCVCFNCS+IL DE+DH+
Sbjct: 61 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILVDEDDHK 120
Query: 5780 FKQAMKVKNPKHRLKRVLDCCKNKTKCEGGDSIXXXXXXXXXXEVKKKPHGGCGSQQPKI 5601
FK A+++KNPK+RLK++LD CKNKTKCEGGD I KK GGCG+QQPK+
Sbjct: 121 FKTALRIKNPKNRLKKILDACKNKTKCEGGDEIDVQDTDEPL----KKSRGGCGAQQPKL 176
Query: 5600 TIDGMKIIAEYRAPRKKADEQDQLMPEPVERKQQLTAERVLNILKRISDEECQMLGFDPQ 5421
TIDGMK++AEY+A RKK+D+Q+QL PEPVERKQ LTAERVL++LKRISDE+CQ+LG +P+
Sbjct: 177 TIDGMKMVAEYKAQRKKSDDQEQL-PEPVERKQTLTAERVLSVLKRISDEDCQLLGLNPK 235
Query: 5420 FARPDWMILQVLXXXXXXXXPSVMMNSTSRSEDDLTHQLAMIIRHNETLKKQEKNGAPAH 5241
+ARPDWMILQVL PSVMM+++SRSEDDLTHQLAMIIRHNE L++QE+NG+PAH
Sbjct: 236 YARPDWMILQVLPIPPQPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGSPAH 295
Query: 5240 IVTEFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDF 5061
I++EFAQLLQFH+ATYFDNELPG PRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDF
Sbjct: 296 IISEFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDF 355
Query: 5060 SARTVITPDPNINIDQLGVPWSIALNLTYPEVVTPYNIERLKELVEYGPHPPPGKTGAKY 4881
SARTVITPDPNINIDQLGVPWSIALNLTYPE VTPYNIERLKELVEYGPHPPPGKTGAKY
Sbjct: 356 SARTVITPDPNINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKY 415
Query: 4880 IIRDDGQRLDLRYLKRSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMP 4701
IIRDDGQRLDLRYLK+SSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMP
Sbjct: 416 IIRDDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMP 475
Query: 4700 YSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIV 4521
YSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIV
Sbjct: 476 YSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIV 535
Query: 4520 QDTLLGCRKITKRDTFIEKDVFMNILMWWEEFDGKIPAPTIYKPRPIWTGKQVFNLIIPK 4341
QDTLLGCRKITKRDTFIEKDVFMNILMWWE+FDGK+PAP I KPRP+WTGKQVFNLIIPK
Sbjct: 536 QDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPK 595
Query: 4340 QINLIRYSAWHNESEKGFLTLGDTQVRIEKGEVLCGTLCKKTLGSSSGSLIHVIWEEVGP 4161
QINL R SAWH+ESE G +T GDT VRIEKGE+L GTLCKK LG+S+GSLIHVIWEEVGP
Sbjct: 596 QINLQRTSAWHSESETGNITPGDTHVRIEKGELLSGTLCKKALGTSTGSLIHVIWEEVGP 655
Query: 4160 DAARKFLGHTQWLVNYWLLQQGFSMGIGDTIADAATMEKINETISNAKVKVQQLIEKAQE 3981
DAARKFLGHTQWLVNYWLLQ FS+GIGDTIADAATMEKINETIS AK +V++LI KAQ
Sbjct: 656 DAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISKAKNEVKELISKAQS 715
Query: 3980 KKLEAEPGRTMMESFENQVNQVLNKARDDAGNSAQKSLSESNNLKAMVTAGSKGSFINIS 3801
K LE EPGRTMM+SFEN+VNQVLN+ARDDAG+SAQKSLSESNNLKAMVTAGSKGSFINIS
Sbjct: 716 KSLEPEPGRTMMDSFENKVNQVLNRARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINIS 775
Query: 3800 QMTACVGQQNVEGKRIPYGFNGRTLPHFTKDDKGPESRGFVENSYLRGLTPQEFFFHAMG 3621
QMTACVGQQNVEGKRIPYGF RTLPHFTKDD GPESRGFVENSYLRGLTPQEFFFHAMG
Sbjct: 776 QMTACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMG 835
Query: 3620 GREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIE 3441
GREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIE
Sbjct: 836 GREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIE 895
Query: 3440 SQKLDSLKMKRKEFDDTYKYEFDQDSWSPNYMLPVYIEDLKSIREFQNVFNAEVQKLEAD 3261
SQKLDSLKMK+KEFD T+ Y FD ++W+P+YMLP ++EDLK+IREF+NVF+AEV KLE D
Sbjct: 896 SQKLDSLKMKKKEFDKTFAYVFDDENWNPDYMLPEHVEDLKTIREFRNVFDAEVSKLETD 955
Query: 3260 RRQLGIEIAPSGDNSWPLPVNLKRLIWNGQKLFKIDPRRPSDMHPMEIVEAIDKLQERLR 3081
R QLG EIA +GDNSWPLPVNLKRLIWN QK FKID RR SDMHPMEIVEAIDKLQERLR
Sbjct: 956 RLQLGTEIAVTGDNSWPLPVNLKRLIWNAQKTFKIDFRRTSDMHPMEIVEAIDKLQERLR 1015
Query: 3080 VVPGDDGLSQEAQKNATLFFNILLRSTLASKRVLKEYHLTKEAFEWIVGEIEARFLQSLV 2901
VVPGDD LS EAQKNATLFFNILLRST ASKRVL+EY LT+EAFEW++GEIE+RFLQSLV
Sbjct: 1016 VVPGDDLLSVEAQKNATLFFNILLRSTFASKRVLEEYRLTREAFEWVIGEIESRFLQSLV 1075
Query: 2900 APGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSV 2721
APGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAK+IKTPSLSV
Sbjct: 1076 APGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSV 1135
Query: 2720 YLKPEVGKTKERAKNVQCALEYTTLRSVTEATEVWYDPDPMSTIIEEDVDFVKSYYEMPD 2541
YLKPE KTKERAKNVQCALEYTTLRSVT+ATEVWYDPDPMST+IEED+DFV+SYYEMPD
Sbjct: 1136 YLKPEANKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDLDFVRSYYEMPD 1195
Query: 2540 EDISPDRISPWLLRIELNREMMVDKKLSMADIAEKINHEFKDDITCIFNDDNAEKLILRI 2361
E+++PD+ISPWLLRIELNREMMVDKKLSMADIAEKIN EF D+TCIFNDDNAEKLILRI
Sbjct: 1196 EEVNPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDGDLTCIFNDDNAEKLILRI 1255
Query: 2360 RIMNDDAPKGEMEDATVEDDAFLKQIESNMLTDMSLRGIPDINKVFIKSVKINKFDENEG 2181
RIMN++ PKG+ +D + EDD FLK+IESNMLT+M+LRGIPDINKVFIK K+NKFD+NEG
Sbjct: 1256 RIMNEETPKGDSQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKHGKVNKFDQNEG 1315
Query: 2180 FTPSQEWMLDTEGVNMLAVMCHEDVDASRTTSNHLIEVIEVLGIEAVRKALLDELRVVIS 2001
F QEWMLDTEGVN+LAV+CH+DVDA RTTSNHLIE+IEVLGIEAVR++LLDELRVVIS
Sbjct: 1316 FKAEQEWMLDTEGVNLLAVLCHDDVDAKRTTSNHLIEIIEVLGIEAVRRSLLDELRVVIS 1375
Query: 2000 FDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAMFAE 1821
FDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDA++FAE
Sbjct: 1376 FDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDASVFAE 1435
Query: 1820 SDYLRGVTENIMLGQLAPIGTGVCSLYLDDKMLQQAIELQLPSYMEGVDFAMSPSMSPVL 1641
+D+LRGVTENIMLGQLAPIGTG C+LYL+D+ML+ AIELQLPSY++G+DF M+PS SPV
Sbjct: 1436 TDHLRGVTENIMLGQLAPIGTGDCALYLNDEMLKNAIELQLPSYVDGLDFGMTPSRSPVS 1495
Query: 1640 -SPNHDPMMSPSYLFSPNMHSSPIADAQFSPYVGGMAF 1530
+P D MMSP+YL SPNM SPI+DAQFSPYVGGMAF
Sbjct: 1496 GTPFRDGMMSPNYLLSPNMRMSPISDAQFSPYVGGMAF 1533
>XP_017252141.1 PREDICTED: DNA-directed RNA polymerase II subunit 1 [Daucus carota
subsp. sativus]
Length = 1843
Score = 2673 bits (6929), Expect = 0.0
Identities = 1303/1538 (84%), Positives = 1424/1538 (92%), Gaps = 1/1538 (0%)
Frame = -2
Query: 6140 MDTRFPFSPAEVAKVKMVQFGIISPDEIRQMSVAQIEHSEIYDNGKPRTGGLSDPRLGTI 5961
MD RFPFSPAEVAKV+MVQFGI+SPDEIRQMSV IEH E + GKP+ GLSDPRLGTI
Sbjct: 1 MDMRFPFSPAEVAKVRMVQFGILSPDEIRQMSVVHIEHGETTERGKPKPSGLSDPRLGTI 60
Query: 5960 DRKLKCESCAAGMAECPGHFGHLELAKPMYHIGFLKTVLSILRCVCFNCSRILADEEDHR 5781
DRK+KCE+C A MAECPGHFGHLELAKPM+HIGFLKTVLSI+RCVCFNCS+ILADEED++
Sbjct: 61 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVLSIMRCVCFNCSKILADEEDYK 120
Query: 5780 FKQAMKVKNPKHRLKRVLDCCKNKTKCEGGDSIXXXXXXXXXXEVKKKPHGGCGSQQPKI 5601
FKQA K++NPK+RLK++LD CK+KTKCEGGD I KK GGCG+QQPKI
Sbjct: 121 FKQAQKIRNPKNRLKKILDSCKSKTKCEGGDEIESQSQDTDEPL--KKSRGGCGAQQPKI 178
Query: 5600 TIDGMKIIAEYRAPRKKADEQDQLMPEPVERKQQLTAERVLNILKRISDEECQMLGFDPQ 5421
TI+GMK+IAEY+ +KK D+ +QL PEPVERKQQL+AERVLN+LKRISDE+C +LG +P+
Sbjct: 179 TIEGMKMIAEYKIQKKKNDDPEQL-PEPVERKQQLSAERVLNVLKRISDEDCMLLGLNPK 237
Query: 5420 FARPDWMILQVLXXXXXXXXPSVMMNSTSRSEDDLTHQLAMIIRHNETLKKQEKNGAPAH 5241
+ARPDWMILQVL PSVMM++++RSEDDLTHQLAMIIRHNE L+KQE+NGAPAH
Sbjct: 238 YARPDWMILQVLPIPPPPVRPSVMMDTSARSEDDLTHQLAMIIRHNENLRKQERNGAPAH 297
Query: 5240 IVTEFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDF 5061
I++EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDF
Sbjct: 298 IISEFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDF 357
Query: 5060 SARTVITPDPNINIDQLGVPWSIALNLTYPEVVTPYNIERLKELVEYGPHPPPGKTGAKY 4881
SARTVITPDP INIDQLGVPWSIALNLTYPE VTPYNIERLKELVEYGPHPPPGKTGAKY
Sbjct: 358 SARTVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKY 417
Query: 4880 IIRDDGQRLDLRYLKRSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMP 4701
IIR+DGQRLDLRYLK+SSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMP
Sbjct: 418 IIREDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMP 477
Query: 4700 YSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIV 4521
YSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIV
Sbjct: 478 YSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIV 537
Query: 4520 QDTLLGCRKITKRDTFIEKDVFMNILMWWEEFDGKIPAPTIYKPRPIWTGKQVFNLIIPK 4341
QDTLLGCRKITKRDTFIEKDVFMNILMWWE+FDGK+PAP I KPRP+WTGKQVFNLIIPK
Sbjct: 538 QDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPK 597
Query: 4340 QINLIRYSAWHNESEKGFLTLGDTQVRIEKGEVLCGTLCKKTLGSSSGSLIHVIWEEVGP 4161
QINL+R SAWH + E G +T GDTQVRIEKGEV+ GTLCKKTLG+S+GSLIHVIWEEVGP
Sbjct: 598 QINLMRQSAWHADGETGHITPGDTQVRIEKGEVITGTLCKKTLGASTGSLIHVIWEEVGP 657
Query: 4160 DAARKFLGHTQWLVNYWLLQQGFSMGIGDTIADAATMEKINETISNAKVKVQQLIEKAQE 3981
DAARKFLGHTQWLVNYWLLQQGFS+GIGDTIADAATMEKINETIS AK V++LI AQ+
Sbjct: 658 DAARKFLGHTQWLVNYWLLQQGFSIGIGDTIADAATMEKINETISTAKNAVKELIRSAQD 717
Query: 3980 KKLEAEPGRTMMESFENQVNQVLNKARDDAGNSAQKSLSESNNLKAMVTAGSKGSFINIS 3801
K LE EPGRTMMESFEN+VNQVLNKARDDAG+SA+KSLSESNNLKAMVTAGSKGSFINIS
Sbjct: 718 KDLEPEPGRTMMESFENKVNQVLNKARDDAGSSAEKSLSESNNLKAMVTAGSKGSFINIS 777
Query: 3800 QMTACVGQQNVEGKRIPYGFNGRTLPHFTKDDKGPESRGFVENSYLRGLTPQEFFFHAMG 3621
QMTACVGQQNVEGKRIPYGF RTLPHFTKDD GPESRGFVENSYLRGLTPQEFFFHAMG
Sbjct: 778 QMTACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMG 837
Query: 3620 GREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIE 3441
GREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIE
Sbjct: 838 GREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIE 897
Query: 3440 SQKLDSLKMKRKEFDDTYKYEFDQDSWSPNYMLPVYIEDLKSIREFQNVFNAEVQKLEAD 3261
SQKLDSLKMK+ EFD ++YE D +W+P+YMLP ++EDLK+IREF+NVF+AEVQKLEAD
Sbjct: 898 SQKLDSLKMKKNEFDKVFRYEIDDGNWNPSYMLPDHVEDLKTIREFRNVFDAEVQKLEAD 957
Query: 3260 RRQLGIEIAPSGDNSWPLPVNLKRLIWNGQKLFKIDPRRPSDMHPMEIVEAIDKLQERLR 3081
R QLG EI +GDN+WP+PVNLKRLIWN QK FK+D RRPSDMHPMEIVEA+DKLQERL+
Sbjct: 958 RFQLGTEITTTGDNTWPMPVNLKRLIWNAQKTFKVDLRRPSDMHPMEIVEAVDKLQERLK 1017
Query: 3080 VVPGDDGLSQEAQKNATLFFNILLRSTLASKRVLKEYHLTKEAFEWIVGEIEARFLQSLV 2901
VVPGDD +S EAQKNATLFFNILLRST ASKRVLKEY LT+EAF+W++GEIE+RFLQSLV
Sbjct: 1018 VVPGDDLMSMEAQKNATLFFNILLRSTFASKRVLKEYRLTREAFDWVIGEIESRFLQSLV 1077
Query: 2900 APGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSV 2721
APGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSV
Sbjct: 1078 APGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSV 1137
Query: 2720 YLKPEVGKTKERAKNVQCALEYTTLRSVTEATEVWYDPDPMSTIIEEDVDFVKSYYEMPD 2541
YLKP V +KE+AKNVQCALEYTTLRSVT+ATEVWYDPDPMSTII+EDVDFVKSYYEMPD
Sbjct: 1138 YLKPNVSSSKEKAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIDEDVDFVKSYYEMPD 1197
Query: 2540 EDISPDRISPWLLRIELNREMMVDKKLSMADIAEKINHEFKDDITCIFNDDNAEKLILRI 2361
E+I PD+ISPWLLR++LNREMM+DKKLSMADIAEKIN EF DD+TCIFNDDNA+KLILRI
Sbjct: 1198 EEIDPDKISPWLLRVQLNREMMIDKKLSMADIAEKINLEFDDDLTCIFNDDNADKLILRI 1257
Query: 2360 RIMNDDAPKGEMEDATVEDDAFLKQIESNMLTDMSLRGIPDINKVFIKSVKINKFDENEG 2181
RIMND+APKGE++D + EDD FLK+IESNMLT+M+LRGIPDINKVFIK K N+FDEN G
Sbjct: 1258 RIMNDEAPKGELQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKQQKTNRFDENNG 1317
Query: 2180 FTPSQEWMLDTEGVNMLAVMCHEDVDASRTTSNHLIEVIEVLGIEAVRKALLDELRVVIS 2001
F EWMLDTEGVN+LAV+CHE+VDA RTTSNHLIEVIEVLGIEAVR++LLDELRVVIS
Sbjct: 1318 FVTEPEWMLDTEGVNLLAVICHEEVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVIS 1377
Query: 2000 FDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAMFAE 1821
FDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAA++AE
Sbjct: 1378 FDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAE 1437
Query: 1820 SDYLRGVTENIMLGQLAPIGTGVCSLYLDDKMLQQAIELQLPSYMEGVDFAMSPSMSPVL 1641
+DYLRGVTENIMLGQLAPIGTG CSLYL++KML+QAI++QLPSYM+G+DF M+P+ SP+
Sbjct: 1438 TDYLRGVTENIMLGQLAPIGTGDCSLYLNEKMLKQAIDIQLPSYMDGLDFGMTPARSPIS 1497
Query: 1640 -SPNHDPMMSPSYLFSPNMHSSPIADAQFSPYVGGMAF 1530
+P HD MMSP+Y+ SPN+ SPI DAQFSPYVGGM F
Sbjct: 1498 GTPYHDGMMSPNYMLSPNLRLSPITDAQFSPYVGGMGF 1535
>KRH28857.1 hypothetical protein GLYMA_11G081200 [Glycine max]
Length = 1803
Score = 2672 bits (6926), Expect = 0.0
Identities = 1307/1538 (84%), Positives = 1430/1538 (92%), Gaps = 1/1538 (0%)
Frame = -2
Query: 6140 MDTRFPFSPAEVAKVKMVQFGIISPDEIRQMSVAQIEHSEIYDNGKPRTGGLSDPRLGTI 5961
MD RFPFSPAEVAKV+MVQFGI+SPDEIRQMSV QIEH E + GKP+ GGLSDPRLGTI
Sbjct: 1 MDIRFPFSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHGETTERGKPKVGGLSDPRLGTI 60
Query: 5960 DRKLKCESCAAGMAECPGHFGHLELAKPMYHIGFLKTVLSILRCVCFNCSRILADEEDHR 5781
DRKLKCE+C A MAECPGHFGHLELAKPM+HIGFLKTVL+I+RCVCFNCS+ILADE DH+
Sbjct: 61 DRKLKCETCTASMAECPGHFGHLELAKPMFHIGFLKTVLTIMRCVCFNCSKILADENDHK 120
Query: 5780 FKQAMKVKNPKHRLKRVLDCCKNKTKCEGGDSIXXXXXXXXXXEVKKKPHGGCGSQQPKI 5601
FKQA++++NPK+RLK++LD CKNK+KCEGGD I KK GGCG+QQPKI
Sbjct: 121 FKQALRIRNPKNRLKKILDACKNKSKCEGGDEIDIPGQDTDEPV--KKSRGGCGAQQPKI 178
Query: 5600 TIDGMKIIAEYRAPRKKADEQDQLMPEPVERKQQLTAERVLNILKRISDEECQMLGFDPQ 5421
TI+GMK+IAEY+A RKK+D+Q+QL PEPVERKQ L+AERVL +LKRISDE+CQ+LG +P+
Sbjct: 179 TIEGMKMIAEYKAQRKKSDDQEQL-PEPVERKQTLSAERVLGVLKRISDEDCQLLGLNPK 237
Query: 5420 FARPDWMILQVLXXXXXXXXPSVMMNSTSRSEDDLTHQLAMIIRHNETLKKQEKNGAPAH 5241
+ARPDWMILQVL PSVMM+++SRSEDDLTHQLAMIIRHNE LK+QE+NG+PAH
Sbjct: 238 YARPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGSPAH 297
Query: 5240 IVTEFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDF 5061
I++EFAQLLQFH+ATYFDNELPG PRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDF
Sbjct: 298 IISEFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDF 357
Query: 5060 SARTVITPDPNINIDQLGVPWSIALNLTYPEVVTPYNIERLKELVEYGPHPPPGKTGAKY 4881
SARTVITPDP INIDQLGVPWSIALNLTYPE VTPYNIERLKELVEYGPHPPPGKTGAKY
Sbjct: 358 SARTVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKY 417
Query: 4880 IIRDDGQRLDLRYLKRSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMP 4701
IIRDDGQRLDLRYLK+SSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMP
Sbjct: 418 IIRDDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMP 477
Query: 4700 YSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIV 4521
YSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIV
Sbjct: 478 YSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIV 537
Query: 4520 QDTLLGCRKITKRDTFIEKDVFMNILMWWEEFDGKIPAPTIYKPRPIWTGKQVFNLIIPK 4341
QDTLLGCRKITKRDTFI KDVFMNILMWWE+FDGK+PAP I KP P+WTGKQVFNLIIPK
Sbjct: 538 QDTLLGCRKITKRDTFITKDVFMNILMWWEDFDGKVPAPAILKPEPLWTGKQVFNLIIPK 597
Query: 4340 QINLIRYSAWHNESEKGFLTLGDTQVRIEKGEVLCGTLCKKTLGSSSGSLIHVIWEEVGP 4161
QINLIRYS+WH+ESE+G +T GDT VRIEKGE+L GTLCKKTLG+S+GSLIHVIWEEVGP
Sbjct: 598 QINLIRYSSWHSESERGSITPGDTMVRIEKGELLTGTLCKKTLGTSTGSLIHVIWEEVGP 657
Query: 4160 DAARKFLGHTQWLVNYWLLQQGFSMGIGDTIADAATMEKINETISNAKVKVQQLIEKAQE 3981
DAARKFLGHTQWLVNYWLLQ FS+GIGDTIADA+TME IN+TIS AK KV+QLI +AQE
Sbjct: 658 DAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADASTMETINQTISAAKEKVKQLIREAQE 717
Query: 3980 KKLEAEPGRTMMESFENQVNQVLNKARDDAGNSAQKSLSESNNLKAMVTAGSKGSFINIS 3801
KKLEAEPGRTMM+SFEN+VNQ LN+ARDDAGNSAQKSLSESNNLKAMVTAGSKGSFINIS
Sbjct: 718 KKLEAEPGRTMMDSFENRVNQTLNRARDDAGNSAQKSLSESNNLKAMVTAGSKGSFINIS 777
Query: 3800 QMTACVGQQNVEGKRIPYGFNGRTLPHFTKDDKGPESRGFVENSYLRGLTPQEFFFHAMG 3621
QMTACVGQQNVEGKRIPYGF RTLPHFTKDD GPESRGFVENSYLRGLTPQEFFFHAMG
Sbjct: 778 QMTACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMG 837
Query: 3620 GREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIE 3441
GREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIE
Sbjct: 838 GREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIE 897
Query: 3440 SQKLDSLKMKRKEFDDTYKYEFDQDSWSPNYMLPVYIEDLKSIREFQNVFNAEVQKLEAD 3261
+QKLDSLKMK+ EFD ++YEFD ++W P YML +EDLK+IREF+NVF AEVQKLEAD
Sbjct: 898 TQKLDSLKMKKTEFDRVFRYEFDDENWKPTYMLEEPVEDLKTIREFRNVFEAEVQKLEAD 957
Query: 3260 RRQLGIEIAPSGDNSWPLPVNLKRLIWNGQKLFKIDPRRPSDMHPMEIVEAIDKLQERLR 3081
R QL EIA +GD+S PLPVNLKRLIWN QK FK+D RRPSDMHPMEIVEAIDKLQERL+
Sbjct: 958 RYQLATEIATTGDSSLPLPVNLKRLIWNAQKTFKVDFRRPSDMHPMEIVEAIDKLQERLK 1017
Query: 3080 VVPGDDGLSQEAQKNATLFFNILLRSTLASKRVLKEYHLTKEAFEWIVGEIEARFLQSLV 2901
VVPG+D LSQEAQKNATL FNILLRST ASKRVL+EY L++EAFEW+VGEIE+RFLQSLV
Sbjct: 1018 VVPGEDLLSQEAQKNATLLFNILLRSTFASKRVLEEYRLSREAFEWVVGEIESRFLQSLV 1077
Query: 2900 APGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSV 2721
A GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAK+IKTPSLSV
Sbjct: 1078 ASGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSV 1137
Query: 2720 YLKPEVGKTKERAKNVQCALEYTTLRSVTEATEVWYDPDPMSTIIEEDVDFVKSYYEMPD 2541
YL+ +VGKTKERAK+VQCALEYTTLRSVT+ATEVWYDPDPMSTIIEED DFVKSYYEMPD
Sbjct: 1138 YLRSDVGKTKERAKSVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDADFVKSYYEMPD 1197
Query: 2540 EDISPDRISPWLLRIELNREMMVDKKLSMADIAEKINHEFKDDITCIFNDDNAEKLILRI 2361
E+++ ++ISPWLLRIELNREMMVDKKLSMADIAEKIN EF DD+TCIFNDDNAEKLILRI
Sbjct: 1198 EEVALEKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRI 1257
Query: 2360 RIMNDDAPKGEMEDATVEDDAFLKQIESNMLTDMSLRGIPDINKVFIKSVKINKFDENEG 2181
RIMND+APKGE++D + EDD FLK+IESNMLT+M+LRGIPDINKVFIK+ K+ KFDEN+G
Sbjct: 1258 RIMNDEAPKGEIQDESAEDDVFLKKIESNMLTEMTLRGIPDINKVFIKNTKVQKFDENQG 1317
Query: 2180 FTPSQEWMLDTEGVNMLAVMCHEDVDASRTTSNHLIEVIEVLGIEAVRKALLDELRVVIS 2001
F P++EWMLDTEGVN+LAVMCHEDVDA+RTTSNHLIEVIEVLGIEAVR+ALLDELRVVIS
Sbjct: 1318 FKPNEEWMLDTEGVNLLAVMCHEDVDATRTTSNHLIEVIEVLGIEAVRRALLDELRVVIS 1377
Query: 2000 FDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAMFAE 1821
FDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAA++AE
Sbjct: 1378 FDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAE 1437
Query: 1820 SDYLRGVTENIMLGQLAPIGTGVCSLYLDDKMLQQAIELQLPSYMEGVDFAMSPSMSPVL 1641
+DYLRGVTENIMLGQLAPIGTG C+LYL+D+ML+ AIELQLPSYM+G+DF M+P+ SP+
Sbjct: 1438 TDYLRGVTENIMLGQLAPIGTGECALYLNDEMLKNAIELQLPSYMDGLDFGMTPARSPIS 1497
Query: 1640 -SPNHDPMMSPSYLFSPNMHSSPIADAQFSPYVGGMAF 1530
+P H+ +MSPSYL SPN+ SP +DAQFSPYVGGMAF
Sbjct: 1498 GTPYHEGLMSPSYLLSPNLRLSPTSDAQFSPYVGGMAF 1535
>XP_006590737.1 PREDICTED: DNA-directed RNA polymerase II subunit 1 [Glycine max]
KRH28855.1 hypothetical protein GLYMA_11G081200 [Glycine
max] KRH28856.1 hypothetical protein GLYMA_11G081200
[Glycine max]
Length = 1827
Score = 2672 bits (6926), Expect = 0.0
Identities = 1307/1538 (84%), Positives = 1430/1538 (92%), Gaps = 1/1538 (0%)
Frame = -2
Query: 6140 MDTRFPFSPAEVAKVKMVQFGIISPDEIRQMSVAQIEHSEIYDNGKPRTGGLSDPRLGTI 5961
MD RFPFSPAEVAKV+MVQFGI+SPDEIRQMSV QIEH E + GKP+ GGLSDPRLGTI
Sbjct: 1 MDIRFPFSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHGETTERGKPKVGGLSDPRLGTI 60
Query: 5960 DRKLKCESCAAGMAECPGHFGHLELAKPMYHIGFLKTVLSILRCVCFNCSRILADEEDHR 5781
DRKLKCE+C A MAECPGHFGHLELAKPM+HIGFLKTVL+I+RCVCFNCS+ILADE DH+
Sbjct: 61 DRKLKCETCTASMAECPGHFGHLELAKPMFHIGFLKTVLTIMRCVCFNCSKILADENDHK 120
Query: 5780 FKQAMKVKNPKHRLKRVLDCCKNKTKCEGGDSIXXXXXXXXXXEVKKKPHGGCGSQQPKI 5601
FKQA++++NPK+RLK++LD CKNK+KCEGGD I KK GGCG+QQPKI
Sbjct: 121 FKQALRIRNPKNRLKKILDACKNKSKCEGGDEIDIPGQDTDEPV--KKSRGGCGAQQPKI 178
Query: 5600 TIDGMKIIAEYRAPRKKADEQDQLMPEPVERKQQLTAERVLNILKRISDEECQMLGFDPQ 5421
TI+GMK+IAEY+A RKK+D+Q+QL PEPVERKQ L+AERVL +LKRISDE+CQ+LG +P+
Sbjct: 179 TIEGMKMIAEYKAQRKKSDDQEQL-PEPVERKQTLSAERVLGVLKRISDEDCQLLGLNPK 237
Query: 5420 FARPDWMILQVLXXXXXXXXPSVMMNSTSRSEDDLTHQLAMIIRHNETLKKQEKNGAPAH 5241
+ARPDWMILQVL PSVMM+++SRSEDDLTHQLAMIIRHNE LK+QE+NG+PAH
Sbjct: 238 YARPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGSPAH 297
Query: 5240 IVTEFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDF 5061
I++EFAQLLQFH+ATYFDNELPG PRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDF
Sbjct: 298 IISEFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDF 357
Query: 5060 SARTVITPDPNINIDQLGVPWSIALNLTYPEVVTPYNIERLKELVEYGPHPPPGKTGAKY 4881
SARTVITPDP INIDQLGVPWSIALNLTYPE VTPYNIERLKELVEYGPHPPPGKTGAKY
Sbjct: 358 SARTVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKY 417
Query: 4880 IIRDDGQRLDLRYLKRSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMP 4701
IIRDDGQRLDLRYLK+SSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMP
Sbjct: 418 IIRDDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMP 477
Query: 4700 YSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIV 4521
YSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIV
Sbjct: 478 YSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIV 537
Query: 4520 QDTLLGCRKITKRDTFIEKDVFMNILMWWEEFDGKIPAPTIYKPRPIWTGKQVFNLIIPK 4341
QDTLLGCRKITKRDTFI KDVFMNILMWWE+FDGK+PAP I KP P+WTGKQVFNLIIPK
Sbjct: 538 QDTLLGCRKITKRDTFITKDVFMNILMWWEDFDGKVPAPAILKPEPLWTGKQVFNLIIPK 597
Query: 4340 QINLIRYSAWHNESEKGFLTLGDTQVRIEKGEVLCGTLCKKTLGSSSGSLIHVIWEEVGP 4161
QINLIRYS+WH+ESE+G +T GDT VRIEKGE+L GTLCKKTLG+S+GSLIHVIWEEVGP
Sbjct: 598 QINLIRYSSWHSESERGSITPGDTMVRIEKGELLTGTLCKKTLGTSTGSLIHVIWEEVGP 657
Query: 4160 DAARKFLGHTQWLVNYWLLQQGFSMGIGDTIADAATMEKINETISNAKVKVQQLIEKAQE 3981
DAARKFLGHTQWLVNYWLLQ FS+GIGDTIADA+TME IN+TIS AK KV+QLI +AQE
Sbjct: 658 DAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADASTMETINQTISAAKEKVKQLIREAQE 717
Query: 3980 KKLEAEPGRTMMESFENQVNQVLNKARDDAGNSAQKSLSESNNLKAMVTAGSKGSFINIS 3801
KKLEAEPGRTMM+SFEN+VNQ LN+ARDDAGNSAQKSLSESNNLKAMVTAGSKGSFINIS
Sbjct: 718 KKLEAEPGRTMMDSFENRVNQTLNRARDDAGNSAQKSLSESNNLKAMVTAGSKGSFINIS 777
Query: 3800 QMTACVGQQNVEGKRIPYGFNGRTLPHFTKDDKGPESRGFVENSYLRGLTPQEFFFHAMG 3621
QMTACVGQQNVEGKRIPYGF RTLPHFTKDD GPESRGFVENSYLRGLTPQEFFFHAMG
Sbjct: 778 QMTACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMG 837
Query: 3620 GREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIE 3441
GREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIE
Sbjct: 838 GREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIE 897
Query: 3440 SQKLDSLKMKRKEFDDTYKYEFDQDSWSPNYMLPVYIEDLKSIREFQNVFNAEVQKLEAD 3261
+QKLDSLKMK+ EFD ++YEFD ++W P YML +EDLK+IREF+NVF AEVQKLEAD
Sbjct: 898 TQKLDSLKMKKTEFDRVFRYEFDDENWKPTYMLEEPVEDLKTIREFRNVFEAEVQKLEAD 957
Query: 3260 RRQLGIEIAPSGDNSWPLPVNLKRLIWNGQKLFKIDPRRPSDMHPMEIVEAIDKLQERLR 3081
R QL EIA +GD+S PLPVNLKRLIWN QK FK+D RRPSDMHPMEIVEAIDKLQERL+
Sbjct: 958 RYQLATEIATTGDSSLPLPVNLKRLIWNAQKTFKVDFRRPSDMHPMEIVEAIDKLQERLK 1017
Query: 3080 VVPGDDGLSQEAQKNATLFFNILLRSTLASKRVLKEYHLTKEAFEWIVGEIEARFLQSLV 2901
VVPG+D LSQEAQKNATL FNILLRST ASKRVL+EY L++EAFEW+VGEIE+RFLQSLV
Sbjct: 1018 VVPGEDLLSQEAQKNATLLFNILLRSTFASKRVLEEYRLSREAFEWVVGEIESRFLQSLV 1077
Query: 2900 APGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSV 2721
A GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAK+IKTPSLSV
Sbjct: 1078 ASGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSV 1137
Query: 2720 YLKPEVGKTKERAKNVQCALEYTTLRSVTEATEVWYDPDPMSTIIEEDVDFVKSYYEMPD 2541
YL+ +VGKTKERAK+VQCALEYTTLRSVT+ATEVWYDPDPMSTIIEED DFVKSYYEMPD
Sbjct: 1138 YLRSDVGKTKERAKSVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDADFVKSYYEMPD 1197
Query: 2540 EDISPDRISPWLLRIELNREMMVDKKLSMADIAEKINHEFKDDITCIFNDDNAEKLILRI 2361
E+++ ++ISPWLLRIELNREMMVDKKLSMADIAEKIN EF DD+TCIFNDDNAEKLILRI
Sbjct: 1198 EEVALEKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRI 1257
Query: 2360 RIMNDDAPKGEMEDATVEDDAFLKQIESNMLTDMSLRGIPDINKVFIKSVKINKFDENEG 2181
RIMND+APKGE++D + EDD FLK+IESNMLT+M+LRGIPDINKVFIK+ K+ KFDEN+G
Sbjct: 1258 RIMNDEAPKGEIQDESAEDDVFLKKIESNMLTEMTLRGIPDINKVFIKNTKVQKFDENQG 1317
Query: 2180 FTPSQEWMLDTEGVNMLAVMCHEDVDASRTTSNHLIEVIEVLGIEAVRKALLDELRVVIS 2001
F P++EWMLDTEGVN+LAVMCHEDVDA+RTTSNHLIEVIEVLGIEAVR+ALLDELRVVIS
Sbjct: 1318 FKPNEEWMLDTEGVNLLAVMCHEDVDATRTTSNHLIEVIEVLGIEAVRRALLDELRVVIS 1377
Query: 2000 FDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAMFAE 1821
FDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAA++AE
Sbjct: 1378 FDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAE 1437
Query: 1820 SDYLRGVTENIMLGQLAPIGTGVCSLYLDDKMLQQAIELQLPSYMEGVDFAMSPSMSPVL 1641
+DYLRGVTENIMLGQLAPIGTG C+LYL+D+ML+ AIELQLPSYM+G+DF M+P+ SP+
Sbjct: 1438 TDYLRGVTENIMLGQLAPIGTGECALYLNDEMLKNAIELQLPSYMDGLDFGMTPARSPIS 1497
Query: 1640 -SPNHDPMMSPSYLFSPNMHSSPIADAQFSPYVGGMAF 1530
+P H+ +MSPSYL SPN+ SP +DAQFSPYVGGMAF
Sbjct: 1498 GTPYHEGLMSPSYLLSPNLRLSPTSDAQFSPYVGGMAF 1535