BLASTX nr result
ID: Ephedra29_contig00001600
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra29_contig00001600
(241 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_020109467.1 DNA-directed RNA polymerase 1B, mitochondrial-lik... 123 6e-31
OAY76980.1 DNA-directed RNA polymerase 2B, chloroplastic/mitocho... 123 6e-31
XP_010261422.1 PREDICTED: DNA-directed RNA polymerase 2B, chloro... 122 2e-30
XP_010261414.1 PREDICTED: DNA-directed RNA polymerase 2B, chloro... 122 2e-30
XP_010929072.1 PREDICTED: DNA-directed RNA polymerase 2B, chloro... 120 4e-30
XP_006389224.1 hypothetical protein POPTR_0035s00410g [Populus t... 118 4e-30
XP_002315996.2 DNA-directed RNA polymerase family protein [Popul... 120 5e-30
XP_011009271.1 PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA ... 120 5e-30
JAT46286.1 DNA-directed RNA polymerase 2B, chloroplastic/mitocho... 120 5e-30
XP_017630388.1 PREDICTED: DNA-directed RNA polymerase 2B, chloro... 120 7e-30
XP_016701452.1 PREDICTED: DNA-directed RNA polymerase 2B, chloro... 120 7e-30
XP_016672433.1 PREDICTED: DNA-directed RNA polymerase 2B, chloro... 120 7e-30
XP_012491229.1 PREDICTED: DNA-directed RNA polymerase 2B, chloro... 120 7e-30
KJB42980.1 hypothetical protein B456_007G178100 [Gossypium raimo... 120 7e-30
XP_010904634.1 PREDICTED: DNA-directed RNA polymerase 3B, chloro... 120 7e-30
XP_010904633.1 PREDICTED: DNA-directed RNA polymerase 3B, chloro... 120 7e-30
GAU51335.1 hypothetical protein TSUD_412820 [Trifolium subterran... 120 7e-30
XP_011021147.1 PREDICTED: DNA-directed RNA polymerase 1B, mitoch... 120 7e-30
XP_002311418.2 hypothetical protein POPTR_0008s11200g [Populus t... 120 7e-30
XP_017630387.1 PREDICTED: DNA-directed RNA polymerase 2B, chloro... 120 7e-30
>XP_020109467.1 DNA-directed RNA polymerase 1B, mitochondrial-like [Ananas comosus]
Length = 890
Score = 123 bits (308), Expect = 6e-31
Identities = 56/79 (70%), Positives = 67/79 (84%)
Frame = -3
Query: 239 ECDALVRQGLERTARHVVIPYMPMLVRPNPWKGFDKGPYLFLPSYVMRIHGAKKQREALK 60
ECD LVRQGL+RTARH+VIPYMPMLV P W G+DKG +LFLPSY+MRIHGA++QREA+K
Sbjct: 298 ECDPLVRQGLDRTARHMVIPYMPMLVPPVNWMGYDKGAHLFLPSYIMRIHGARQQREAVK 357
Query: 59 RVSRNQMQKLYKVLDVLGS 3
R R QMQ +++ LD LGS
Sbjct: 358 RAPRKQMQAVFEALDTLGS 376
>OAY76980.1 DNA-directed RNA polymerase 2B, chloroplastic/mitochondrial [Ananas
comosus]
Length = 909
Score = 123 bits (308), Expect = 6e-31
Identities = 56/79 (70%), Positives = 67/79 (84%)
Frame = -3
Query: 239 ECDALVRQGLERTARHVVIPYMPMLVRPNPWKGFDKGPYLFLPSYVMRIHGAKKQREALK 60
ECD LVRQGL+RTARH+VIPYMPMLV P W G+DKG +LFLPSY+MRIHGA++QREA+K
Sbjct: 418 ECDPLVRQGLDRTARHMVIPYMPMLVPPVNWMGYDKGAHLFLPSYIMRIHGARQQREAVK 477
Query: 59 RVSRNQMQKLYKVLDVLGS 3
R R QMQ +++ LD LGS
Sbjct: 478 RAPRKQMQAVFEALDTLGS 496
>XP_010261422.1 PREDICTED: DNA-directed RNA polymerase 2B,
chloroplastic/mitochondrial-like isoform X2 [Nelumbo
nucifera]
Length = 942
Score = 122 bits (305), Expect = 2e-30
Identities = 55/79 (69%), Positives = 67/79 (84%)
Frame = -3
Query: 239 ECDALVRQGLERTARHVVIPYMPMLVRPNPWKGFDKGPYLFLPSYVMRIHGAKKQREALK 60
ECD LVR+GLERTARH+VIPYMPMLV P W G+DKG YLFLPSYVMR HGA++QREA+K
Sbjct: 398 ECDPLVRKGLERTARHMVIPYMPMLVPPLNWTGYDKGAYLFLPSYVMRTHGARQQREAVK 457
Query: 59 RVSRNQMQKLYKVLDVLGS 3
R SR Q++ +++ LD LG+
Sbjct: 458 RTSRKQLEPIFEALDTLGN 476
>XP_010261414.1 PREDICTED: DNA-directed RNA polymerase 2B,
chloroplastic/mitochondrial-like isoform X1 [Nelumbo
nucifera]
Length = 990
Score = 122 bits (305), Expect = 2e-30
Identities = 55/79 (69%), Positives = 67/79 (84%)
Frame = -3
Query: 239 ECDALVRQGLERTARHVVIPYMPMLVRPNPWKGFDKGPYLFLPSYVMRIHGAKKQREALK 60
ECD LVR+GLERTARH+VIPYMPMLV P W G+DKG YLFLPSYVMR HGA++QREA+K
Sbjct: 398 ECDPLVRKGLERTARHMVIPYMPMLVPPLNWTGYDKGAYLFLPSYVMRTHGARQQREAVK 457
Query: 59 RVSRNQMQKLYKVLDVLGS 3
R SR Q++ +++ LD LG+
Sbjct: 458 RTSRKQLEPIFEALDTLGN 476
>XP_010929072.1 PREDICTED: DNA-directed RNA polymerase 2B,
chloroplastic/mitochondrial-like [Elaeis guineensis]
Length = 1038
Score = 120 bits (302), Expect = 4e-30
Identities = 55/79 (69%), Positives = 67/79 (84%)
Frame = -3
Query: 239 ECDALVRQGLERTARHVVIPYMPMLVRPNPWKGFDKGPYLFLPSYVMRIHGAKKQREALK 60
ECD LVRQGL+RTARH+VIPYMPMLV P W G+DKG +LFLPSY+MRIHGA++QREA+K
Sbjct: 446 ECDPLVRQGLDRTARHMVIPYMPMLVPPVHWTGYDKGGHLFLPSYIMRIHGARQQREAVK 505
Query: 59 RVSRNQMQKLYKVLDVLGS 3
R R QMQ +++ LD LG+
Sbjct: 506 RAPRMQMQAVFEALDTLGT 524
>XP_006389224.1 hypothetical protein POPTR_0035s00410g [Populus trichocarpa]
ERP48138.1 hypothetical protein POPTR_0035s00410g
[Populus trichocarpa]
Length = 381
Score = 118 bits (295), Expect = 4e-30
Identities = 53/79 (67%), Positives = 67/79 (84%)
Frame = -3
Query: 239 ECDALVRQGLERTARHVVIPYMPMLVRPNPWKGFDKGPYLFLPSYVMRIHGAKKQREALK 60
+CD LV +GLE+TARH+VIPYMPMLV P W+G+DKG +LFLPSYVMRIHGAK+QREA+K
Sbjct: 301 QCDPLVLKGLEKTARHMVIPYMPMLVPPLRWRGYDKGAHLFLPSYVMRIHGAKQQREAVK 360
Query: 59 RVSRNQMQKLYKVLDVLGS 3
R R Q+Q +++ LD LG+
Sbjct: 361 RAPRKQLQPVFEALDTLGN 379
>XP_002315996.2 DNA-directed RNA polymerase family protein [Populus trichocarpa]
EEF02167.2 DNA-directed RNA polymerase family protein
[Populus trichocarpa]
Length = 862
Score = 120 bits (301), Expect = 5e-30
Identities = 54/79 (68%), Positives = 67/79 (84%)
Frame = -3
Query: 239 ECDALVRQGLERTARHVVIPYMPMLVRPNPWKGFDKGPYLFLPSYVMRIHGAKKQREALK 60
ECD LVR+GLE++ARH+VIPYMPMLV P W G+D+G Y FLPSYVMRIHGAK+QR A+K
Sbjct: 270 ECDPLVRKGLEKSARHMVIPYMPMLVPPLNWTGYDQGAYFFLPSYVMRIHGAKQQRVAIK 329
Query: 59 RVSRNQMQKLYKVLDVLGS 3
R SRNQ++ ++K LD LG+
Sbjct: 330 RASRNQLEPVFKALDTLGN 348
>XP_011009271.1 PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase 1B,
mitochondrial [Populus euphratica]
Length = 992
Score = 120 bits (301), Expect = 5e-30
Identities = 54/79 (68%), Positives = 67/79 (84%)
Frame = -3
Query: 239 ECDALVRQGLERTARHVVIPYMPMLVRPNPWKGFDKGPYLFLPSYVMRIHGAKKQREALK 60
ECD LVR+GLE++ARH+VIPYMPMLV P W G+D+G Y FLPSYVMRIHGAK+QR A+K
Sbjct: 396 ECDPLVRKGLEKSARHMVIPYMPMLVPPLNWTGYDQGAYFFLPSYVMRIHGAKQQRVAIK 455
Query: 59 RVSRNQMQKLYKVLDVLGS 3
R SRNQ++ ++K LD LG+
Sbjct: 456 RASRNQLEPVFKALDTLGN 474
>JAT46286.1 DNA-directed RNA polymerase 2B, chloroplastic/mitochondrial
[Anthurium amnicola]
Length = 1072
Score = 120 bits (301), Expect = 5e-30
Identities = 53/79 (67%), Positives = 67/79 (84%)
Frame = -3
Query: 239 ECDALVRQGLERTARHVVIPYMPMLVRPNPWKGFDKGPYLFLPSYVMRIHGAKKQREALK 60
ECD LV+QGL+RTARH+VIPYMPMLV P W G+DKG +LFLPSY+MR HG+++QREA+K
Sbjct: 480 ECDPLVKQGLDRTARHMVIPYMPMLVTPVNWTGYDKGAHLFLPSYIMRTHGSRQQREAVK 539
Query: 59 RVSRNQMQKLYKVLDVLGS 3
R RNQ+Q +Y+ LD LG+
Sbjct: 540 RAPRNQLQGVYEALDTLGT 558
>XP_017630388.1 PREDICTED: DNA-directed RNA polymerase 2B,
chloroplastic/mitochondrial-like isoform X2 [Gossypium
arboreum]
Length = 723
Score = 120 bits (300), Expect = 7e-30
Identities = 53/78 (67%), Positives = 66/78 (84%)
Frame = -3
Query: 239 ECDALVRQGLERTARHVVIPYMPMLVRPNPWKGFDKGPYLFLPSYVMRIHGAKKQREALK 60
ECD LVR+GLERTARH+VIPYMPMLV P W G+D+G YLFLPSY+MR HGAK+QREA+K
Sbjct: 131 ECDPLVRKGLERTARHMVIPYMPMLVPPVKWTGYDRGAYLFLPSYIMRTHGAKQQREAVK 190
Query: 59 RVSRNQMQKLYKVLDVLG 6
R NQ++++++ LD LG
Sbjct: 191 RTPTNQLEQVFEALDTLG 208
>XP_016701452.1 PREDICTED: DNA-directed RNA polymerase 2B,
chloroplastic/mitochondrial-like isoform X2 [Gossypium
hirsutum]
Length = 723
Score = 120 bits (300), Expect = 7e-30
Identities = 53/78 (67%), Positives = 66/78 (84%)
Frame = -3
Query: 239 ECDALVRQGLERTARHVVIPYMPMLVRPNPWKGFDKGPYLFLPSYVMRIHGAKKQREALK 60
ECD LVR+GLERTARH+VIPYMPMLV P W G+D+G YLFLPSY+MR HGAK+QREA+K
Sbjct: 131 ECDPLVRKGLERTARHMVIPYMPMLVPPVKWTGYDRGAYLFLPSYIMRTHGAKQQREAVK 190
Query: 59 RVSRNQMQKLYKVLDVLG 6
R NQ++++++ LD LG
Sbjct: 191 RTPTNQLEQVFEALDTLG 208
>XP_016672433.1 PREDICTED: DNA-directed RNA polymerase 2B,
chloroplastic/mitochondrial-like isoform X2 [Gossypium
hirsutum]
Length = 723
Score = 120 bits (300), Expect = 7e-30
Identities = 53/78 (67%), Positives = 66/78 (84%)
Frame = -3
Query: 239 ECDALVRQGLERTARHVVIPYMPMLVRPNPWKGFDKGPYLFLPSYVMRIHGAKKQREALK 60
ECD LVR+GLERTARH+VIPYMPMLV P W G+D+G YLFLPSY+MR HGAK+QREA+K
Sbjct: 131 ECDPLVRKGLERTARHMVIPYMPMLVPPVKWTGYDRGAYLFLPSYIMRTHGAKQQREAVK 190
Query: 59 RVSRNQMQKLYKVLDVLG 6
R NQ++++++ LD LG
Sbjct: 191 RTPTNQLEQVFEALDTLG 208
>XP_012491229.1 PREDICTED: DNA-directed RNA polymerase 2B,
chloroplastic/mitochondrial isoform X2 [Gossypium
raimondii]
Length = 723
Score = 120 bits (300), Expect = 7e-30
Identities = 53/78 (67%), Positives = 66/78 (84%)
Frame = -3
Query: 239 ECDALVRQGLERTARHVVIPYMPMLVRPNPWKGFDKGPYLFLPSYVMRIHGAKKQREALK 60
ECD LVR+GLERTARH+VIPYMPMLV P W G+D+G YLFLPSY+MR HGAK+QREA+K
Sbjct: 131 ECDPLVRKGLERTARHMVIPYMPMLVPPVKWTGYDRGAYLFLPSYIMRTHGAKQQREAVK 190
Query: 59 RVSRNQMQKLYKVLDVLG 6
R NQ++++++ LD LG
Sbjct: 191 RTPTNQLEQVFEALDTLG 208
>KJB42980.1 hypothetical protein B456_007G178100 [Gossypium raimondii]
Length = 744
Score = 120 bits (300), Expect = 7e-30
Identities = 53/78 (67%), Positives = 66/78 (84%)
Frame = -3
Query: 239 ECDALVRQGLERTARHVVIPYMPMLVRPNPWKGFDKGPYLFLPSYVMRIHGAKKQREALK 60
ECD LVR+GLERTARH+VIPYMPMLV P W G+D+G YLFLPSY+MR HGAK+QREA+K
Sbjct: 436 ECDPLVRKGLERTARHMVIPYMPMLVPPVKWTGYDRGAYLFLPSYIMRTHGAKQQREAVK 495
Query: 59 RVSRNQMQKLYKVLDVLG 6
R NQ++++++ LD LG
Sbjct: 496 RTPTNQLEQVFEALDTLG 513
>XP_010904634.1 PREDICTED: DNA-directed RNA polymerase 3B, chloroplastic isoform X2
[Elaeis guineensis]
Length = 877
Score = 120 bits (300), Expect = 7e-30
Identities = 53/79 (67%), Positives = 67/79 (84%)
Frame = -3
Query: 239 ECDALVRQGLERTARHVVIPYMPMLVRPNPWKGFDKGPYLFLPSYVMRIHGAKKQREALK 60
ECD LV++GL+ TARHVVIPY+PML+ P WKG+DKG +LFLPSYVMR HGAK Q++A+K
Sbjct: 302 ECDPLVQKGLDSTARHVVIPYLPMLIPPKNWKGYDKGGHLFLPSYVMRTHGAKDQQDAIK 361
Query: 59 RVSRNQMQKLYKVLDVLGS 3
V R Q+QK++K LD+LGS
Sbjct: 362 SVPRKQLQKVFKALDILGS 380
>XP_010904633.1 PREDICTED: DNA-directed RNA polymerase 3B, chloroplastic isoform X1
[Elaeis guineensis]
Length = 894
Score = 120 bits (300), Expect = 7e-30
Identities = 53/79 (67%), Positives = 67/79 (84%)
Frame = -3
Query: 239 ECDALVRQGLERTARHVVIPYMPMLVRPNPWKGFDKGPYLFLPSYVMRIHGAKKQREALK 60
ECD LV++GL+ TARHVVIPY+PML+ P WKG+DKG +LFLPSYVMR HGAK Q++A+K
Sbjct: 302 ECDPLVQKGLDSTARHVVIPYLPMLIPPKNWKGYDKGGHLFLPSYVMRTHGAKDQQDAIK 361
Query: 59 RVSRNQMQKLYKVLDVLGS 3
V R Q+QK++K LD+LGS
Sbjct: 362 SVPRKQLQKVFKALDILGS 380
>GAU51335.1 hypothetical protein TSUD_412820 [Trifolium subterraneum]
Length = 943
Score = 120 bits (300), Expect = 7e-30
Identities = 52/79 (65%), Positives = 67/79 (84%)
Frame = -3
Query: 239 ECDALVRQGLERTARHVVIPYMPMLVRPNPWKGFDKGPYLFLPSYVMRIHGAKKQREALK 60
ECD ++++GLE+TARH+VIPYMPMLV PN W G+DKG YLFLPSYVMRIHGAK+QR ALK
Sbjct: 320 ECDPMIQKGLEKTARHMVIPYMPMLVPPNSWTGYDKGAYLFLPSYVMRIHGAKQQRAALK 379
Query: 59 RVSRNQMQKLYKVLDVLGS 3
R +NQ+ +++ L+ LG+
Sbjct: 380 RAPKNQLDPVFEALNTLGA 398
>XP_011021147.1 PREDICTED: DNA-directed RNA polymerase 1B, mitochondrial-like
[Populus euphratica]
Length = 988
Score = 120 bits (300), Expect = 7e-30
Identities = 53/79 (67%), Positives = 69/79 (87%)
Frame = -3
Query: 239 ECDALVRQGLERTARHVVIPYMPMLVRPNPWKGFDKGPYLFLPSYVMRIHGAKKQREALK 60
ECD LVR+GLE++ARH+VIPYMPMLV P W G+D+G +LFLPSYVMRIHG+K+QR+A+K
Sbjct: 396 ECDPLVRKGLEKSARHMVIPYMPMLVPPLNWTGYDQGAHLFLPSYVMRIHGSKQQRDAVK 455
Query: 59 RVSRNQMQKLYKVLDVLGS 3
R SRNQ++ ++K LD LG+
Sbjct: 456 RASRNQLEPVFKALDTLGN 474
>XP_002311418.2 hypothetical protein POPTR_0008s11200g [Populus trichocarpa]
EEE88785.2 hypothetical protein POPTR_0008s11200g
[Populus trichocarpa] APR63801.1 hypothetical protein
[Populus tomentosa]
Length = 988
Score = 120 bits (300), Expect = 7e-30
Identities = 53/79 (67%), Positives = 69/79 (87%)
Frame = -3
Query: 239 ECDALVRQGLERTARHVVIPYMPMLVRPNPWKGFDKGPYLFLPSYVMRIHGAKKQREALK 60
ECD LVR+GLE++ARH+VIPYMPMLV P W G+D+G +LFLPSYVMRIHG+K+QR+A+K
Sbjct: 396 ECDPLVRKGLEKSARHMVIPYMPMLVPPLNWTGYDQGAHLFLPSYVMRIHGSKQQRDAVK 455
Query: 59 RVSRNQMQKLYKVLDVLGS 3
R SRNQ++ ++K LD LG+
Sbjct: 456 RASRNQLEPVFKALDTLGN 474
>XP_017630387.1 PREDICTED: DNA-directed RNA polymerase 2B,
chloroplastic/mitochondrial-like isoform X1 [Gossypium
arboreum]
Length = 1028
Score = 120 bits (300), Expect = 7e-30
Identities = 53/78 (67%), Positives = 66/78 (84%)
Frame = -3
Query: 239 ECDALVRQGLERTARHVVIPYMPMLVRPNPWKGFDKGPYLFLPSYVMRIHGAKKQREALK 60
ECD LVR+GLERTARH+VIPYMPMLV P W G+D+G YLFLPSY+MR HGAK+QREA+K
Sbjct: 436 ECDPLVRKGLERTARHMVIPYMPMLVPPVKWTGYDRGAYLFLPSYIMRTHGAKQQREAVK 495
Query: 59 RVSRNQMQKLYKVLDVLG 6
R NQ++++++ LD LG
Sbjct: 496 RTPTNQLEQVFEALDTLG 513