BLASTX nr result
ID: Ephedra29_contig00001579
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra29_contig00001579
(2652 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJP06347.1 RDR6 [Pinus tabuliformis] 483 0.0
XP_008778879.1 PREDICTED: LOW QUALITY PROTEIN: probable RNA-depe... 403 0.0
XP_010921974.1 PREDICTED: probable RNA-dependent RNA polymerase ... 395 0.0
XP_011081567.1 PREDICTED: RNA-dependent RNA polymerase 6 [Sesamu... 395 0.0
ONK69832.1 uncharacterized protein A4U43_C05F27200 [Asparagus of... 387 0.0
XP_015885879.1 PREDICTED: RNA-dependent RNA polymerase 6 [Ziziph... 392 0.0
XP_020098906.1 probable RNA-dependent RNA polymerase SHL2 [Anana... 392 0.0
XP_002324295.1 SILENCING DEFECTIVE 1 family protein [Populus tri... 395 0.0
OAY64204.1 putative RNA-dependent RNA polymerase SHL2 [Ananas co... 388 0.0
OAY27377.1 hypothetical protein MANES_16G121400 [Manihot esculenta] 390 0.0
XP_008219491.1 PREDICTED: RNA-dependent RNA polymerase 6 [Prunus... 390 0.0
XP_010254390.1 PREDICTED: RNA-dependent RNA polymerase 6-like [N... 381 0.0
XP_012857917.1 PREDICTED: RNA-dependent RNA polymerase 6 [Erythr... 383 0.0
XP_012071453.1 PREDICTED: RNA-dependent RNA polymerase 6-like [J... 392 0.0
XP_007225440.1 hypothetical protein PRUPE_ppa000422mg [Prunus pe... 389 0.0
XP_010101266.1 RNA-dependent RNA polymerase 6 [Morus notabilis] ... 389 0.0
XP_020108971.1 probable RNA-dependent RNA polymerase SHL2 [Anana... 382 0.0
JAT66018.1 RNA-dependent RNA polymerase 6 [Anthurium amnicola] 372 0.0
XP_011026450.1 PREDICTED: RNA-dependent RNA polymerase 6-like [P... 392 0.0
XP_012076580.1 PREDICTED: RNA-dependent RNA polymerase 6-like [J... 392 0.0
>AJP06347.1 RDR6 [Pinus tabuliformis]
Length = 1189
Score = 483 bits (1244), Expect(2) = 0.0
Identities = 242/427 (56%), Positives = 309/427 (72%), Gaps = 10/427 (2%)
Frame = +1
Query: 7 VKVHYTLLDDEDPWIRTVDFTDKNAFGRCFCYRILVSTKIGHAVEDCKKYLKRDSLFDDE 186
V V + LLDDEDPWIRT+DFT NA GRC Y+I++S ++G+ +E Y +++ L D++
Sbjct: 227 VGVPFALLDDEDPWIRTLDFTPNNALGRCLAYKIVLSLRMGYTMEKAMDYFRQNRLLDEK 286
Query: 187 NEFPGLTLTVRPEGPVPRCWWCFTVPRQESIPFKTLFLLNGLLHKGILNYHSLNEEFYEL 366
+ L + P+ V R + FT+P + I F+T+FLLN L+HKGI+NYH + EFY +
Sbjct: 287 SPSRNLKVNQEPDVYVSRRVFFFTLPHRPRIHFETMFLLNALVHKGIVNYHRITPEFYNM 346
Query: 367 CS-----SELGAMALRHMHIYNHQVYDAVGELKQVL----KGHKFLNDPTLTSDTMEIYR 519
++L +ALRHM Y + V+DA G K VL K K L +P + +T+E+ R
Sbjct: 347 LKPSVTPAKLSILALRHMLAYTNPVFDAFGRFKAVLSWISKNLKLLKNPKIAEETIEVRR 406
Query: 520 LAITPTKAYCLPPEIELSNRVLRQYRSVSDRFLRVSFMDENMEIMGSGSLTIATAPIAKE 699
L ITPTKAYCLPPE+ELSNRVLR ++ +DRFLRV+FMD+NM+ M S LT+ API KE
Sbjct: 407 LVITPTKAYCLPPEVELSNRVLRHFKKFADRFLRVTFMDDNMQAMSSIVLTVPIAPIVKE 466
Query: 700 VSS-SSPYRTAVFRKVKELLRKGFDLCGRHYSFLAFSANQL*DRSSWFFANGENVTVEEI 876
VSS S+ YRTA+F++VK++L KGF LCGR+Y FLAFSANQL DRS+WFFA+GE++TV++I
Sbjct: 467 VSSGSTAYRTAIFKRVKQILHKGFQLCGRYYLFLAFSANQLRDRSAWFFASGEDITVQQI 526
Query: 877 *EWMGRFYNSNVAKHAARMGQCFSSTYSTMXXXXXXXXXXXXXXRNGYVFSDGIGKISSD 1056
+WMG F NVAKHAARMGQCFSSTY T+ R GY FSDGIGKI+
Sbjct: 527 KKWMGNFPKYNVAKHAARMGQCFSSTYCTVEVPSKQVEDLPDIKRKGYDFSDGIGKITPV 586
Query: 1057 LAREVSQKLQLNMNPPSAFQIRFGGYKAVVTAWAAESGHSYKLALRPSMKKFESDHQMLE 1236
LAREV+Q LQLN NPPSAFQIR+GGYK VV WAAESG +KL+LRPSMKKFES+H MLE
Sbjct: 587 LAREVAQMLQLNFNPPSAFQIRYGGYKGVVATWAAESGCKFKLSLRPSMKKFESEHTMLE 646
Query: 1237 IISWSRF 1257
II+W+RF
Sbjct: 647 IITWTRF 653
Score = 346 bits (888), Expect(2) = 0.0
Identities = 170/252 (67%), Positives = 199/252 (78%), Gaps = 1/252 (0%)
Frame = +2
Query: 1256 FLPGYLNRQIITLLSSLGVDDDVFFRLQNEMIYKLGEMLDKVEVAFDVLTSSCTGVLPNM 1435
FLP +LN+QIITLLSSL V D F LQ M+ KL +ML+ VEVAFDVLT+SCTG L N
Sbjct: 653 FLPCFLNKQIITLLSSLLVPDSAFQNLQYSMVEKLSQMLENVEVAFDVLTTSCTGDLQNT 712
Query: 1436 AAIVLNAGFNHEREPLLKDMLAAVRAVQLDDLLRKCRIFVDKGRWLMGCFDETEELEYGQ 1615
AAI+L+AGF + EP LKDML+ +RAVQL++LL KCRIFV +GRWLMGC DE ELEYGQ
Sbjct: 713 AAIMLSAGFTSQSEPHLKDMLSCIRAVQLEELLTKCRIFVPQGRWLMGCLDEIGELEYGQ 772
Query: 1616 CFIRVSTPALKDCYRKHGSTI-QLNTASTILTGKVIVAKNPCLHPGGIRVLEAVDLPQLH 1792
CFI+VS P L+ C+ KHGS+ + T+STI+ GKV+VAKNPCLHPG +R+LEAVD P LH
Sbjct: 773 CFIKVSGPPLEGCFLKHGSSSGERKTSSTIVRGKVVVAKNPCLHPGDVRILEAVDAPSLH 832
Query: 1793 HLVDCLVFPQKGLRPHPNEASGSDLDGDMYFVSWDSRLVPSSGQSWEPMDYNLGEAQEHA 1972
HLVDCLVFPQ G RPHPNEASGSDLD D+YFVSWDS LVP SG+SWEPMDYN GE +
Sbjct: 833 HLVDCLVFPQNGHRPHPNEASGSDLDDDIYFVSWDSSLVPPSGESWEPMDYNAGEVKGSK 892
Query: 1973 KDVKEEKEIGVY 2008
+ VK E I +
Sbjct: 893 EPVKNEDIIDFF 904
Score = 118 bits (295), Expect(2) = 3e-24
Identities = 54/111 (48%), Positives = 80/111 (72%)
Frame = +3
Query: 2031 KREGEIVSGYISSISKYATRRRSDVKDNLQHAYRTLRREFRMYFEGERSSKILDEVEESR 2210
K+EGE+V+G+ISS+SK+ +RR+ ++K+ LQHAYR LR+EFR+ FEG++ + + S
Sbjct: 1055 KKEGEVVTGHISSLSKHNSRRQGEIKERLQHAYRALRKEFRLIFEGKKDCDNFEPCKHSE 1114
Query: 2211 YEAKASAWYRVAYHPIWIRNALQEGKHVSSGYLSHPLLLSFPWICAEYLAR 2363
Y++KASAWY V Y+P W++ A + + GY S P LLSFPWI +YL +
Sbjct: 1115 YKSKASAWYHVTYYPTWVKKARELTE--PDGYFSAP-LLSFPWISVDYLCQ 1162
Score = 25.0 bits (53), Expect(2) = 3e-24
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +2
Query: 2369 RIKIRKLWPDADARTLSMSFTKGLVLK 2449
+IK++K+WPD D + T LV K
Sbjct: 1162 QIKLQKIWPDVDYSSTDGFLTNFLVGK 1188
>XP_008778879.1 PREDICTED: LOW QUALITY PROTEIN: probable RNA-dependent RNA polymerase
SHL2 [Phoenix dactylifera]
Length = 1198
Score = 403 bits (1036), Expect(2) = 0.0
Identities = 218/429 (50%), Positives = 280/429 (65%), Gaps = 12/429 (2%)
Frame = +1
Query: 7 VKVHYTLLDDEDPWIRTVDFTDKNAFGRCFCYRILVSTKIGHAVEDCKKYLKRDSLFDDE 186
V ++LLDDEDPWIRT DFT A RC YRI S + G +++ YLK + +
Sbjct: 242 VTAPFSLLDDEDPWIRTTDFTPGGAISRCCSYRISFSPRYGRILKESLAYLKERRIAEHR 301
Query: 187 NEFPGLTLTVRPEG---PVPRCWWCFTVPRQESIPFKTLFLLNGLLHKGILNYHSLNEEF 357
+ P + L G P P F+V +E I F +FL++ L+HKGI+N H L+EEF
Sbjct: 302 PKRPLVVLEEPDFGTLMPDP----FFSVQHKEGISFSIMFLVDALVHKGIVNQHQLSEEF 357
Query: 358 YELCSSELGAM---ALRHMHIYNHQVYDAVGELKQV----LKGHKFLNDPTLTSDTMEIY 516
+ L S+ +M ALRH+ Y ++DA LK V LK KFL L+ D+ E+
Sbjct: 358 FALLRSQSDSMNETALRHIWAYKTPIFDACRRLKLVQDWLLKNPKFLKSSKLSDDSSEVR 417
Query: 517 RLAITPTKAYCLPPEIELSNRVLRQYRSVSDRFLRVSFMDENMEIMGSGSLTIATAPIAK 696
RL ITPTKAYCLPP +ELSNRVLR Y+ V+DRFLRV+FMDE M+ + + L API K
Sbjct: 418 RLVITPTKAYCLPPGVELSNRVLRNYKEVADRFLRVTFMDEGMQKLNNNVLNYYVAPIVK 477
Query: 697 EVSSSS-PYRTAVFRKVKELLRKGFDLCGRHYSFLAFSANQL*DRSSWFFANGENVTVEE 873
E++S+S P +T VFR+V+ +L GF LCGR YSFLAFS+NQL DRS+WFFA N +VE+
Sbjct: 478 ELTSNSFPQKTTVFRRVRSILIDGFHLCGRRYSFLAFSSNQLRDRSAWFFAEDSNTSVED 537
Query: 874 I*EWMGRFYNSNVAKHAARMGQCFSSTYSTM-XXXXXXXXXXXXXXRNGYVFSDGIGKIS 1050
I +WMG+F N NVAK AARMGQCFSSTY+T+ R GY+FSDGIGKI+
Sbjct: 538 IRDWMGKFANKNVAKCAARMGQCFSSTYATVDVPPDQVNPLLPDIERKGYIFSDGIGKIT 597
Query: 1051 SDLAREVSQKLQLNMNPPSAFQIRFGGYKAVVTAWAAESGHSYKLALRPSMKKFESDHQM 1230
+LA EV++KLQL NPPSA+QIR+ G K VV W + +L+LRPSM KFES H M
Sbjct: 598 PELAMEVAEKLQLTENPPSAYQIRYAGTKGVVAVWPGDD-DGIRLSLRPSMNKFESSHTM 656
Query: 1231 LEIISWSRF 1257
LE++SW+RF
Sbjct: 657 LEVVSWTRF 665
Score = 296 bits (758), Expect(2) = 0.0
Identities = 145/231 (62%), Positives = 173/231 (74%), Gaps = 1/231 (0%)
Frame = +2
Query: 1256 FLPGYLNRQIITLLSSLGVDDDVFFRLQNEMIYKLGEMLDKVEVAFDVLTSSCTGVLPNM 1435
F PG+LNRQI+TLLSSL V D VF +Q+ MIYKL +ML +VAFDVLTSSC N
Sbjct: 665 FQPGFLNRQIVTLLSSLNVPDSVFASMQDSMIYKLNQMLVDTDVAFDVLTSSCAEQ-GNT 723
Query: 1436 AAIVLNAGFNHEREPLLKDMLAAVRAVQLDDLLRKCRIFVDKGRWLMGCFDETEELEYGQ 1615
AAI+L+AGF + EP LK ML+ +R+ QL DLL K R FV KGRWLMGC DE LE+GQ
Sbjct: 724 AAIMLSAGFKPQTEPHLKAMLSCIRSAQLGDLLAKARXFVPKGRWLMGCLDELGVLEHGQ 783
Query: 1616 CFIRVSTPALKDCYRKHGSTIQ-LNTASTILTGKVIVAKNPCLHPGGIRVLEAVDLPQLH 1792
CFI+ S P+L++C+ KHGS + ++ G V +AKNPCLHPG IR+LEAVD+P LH
Sbjct: 784 CFIQSSIPSLENCFMKHGSRFSGIKKNRQVIVGTVAIAKNPCLHPGDIRILEAVDVPSLH 843
Query: 1793 HLVDCLVFPQKGLRPHPNEASGSDLDGDMYFVSWDSRLVPSSGQSWEPMDY 1945
HLVDCLVFPQKG RPH NEASGSDLDGD+YFV+WD L+P +SW PMDY
Sbjct: 844 HLVDCLVFPQKGDRPHANEASGSDLDGDLYFVTWDENLIPPGKKSWIPMDY 894
Score = 93.2 bits (230), Expect = 1e-15
Identities = 52/130 (40%), Positives = 78/130 (60%), Gaps = 2/130 (1%)
Frame = +3
Query: 2031 KREGEIVSGYISSISKYATRRRSDVKDNLQHAYRTLRREFRMYFE--GERSSKILDEVEE 2204
+ EGE+V+G+I S+ KY +R++ ++K+ L++AY L +EFR FE G ++ D+ +
Sbjct: 1061 RSEGEVVTGHIWSLPKYNSRKQGELKERLRNAYSALHKEFRRIFENMGPDFQQLTDDEKC 1120
Query: 2205 SRYEAKASAWYRVAYHPIWIRNALQEGKHVSSGYLSHPLLLSFPWICAEYLARNQELRSG 2384
YE KASAWY+V Y P WI+ L E + + P LSF WI A+YL R ++RSG
Sbjct: 1121 LSYEQKASAWYQVTYQPRWIKK-LSEIEEADGDAV--PARLSFAWIAADYLVR-IKIRSG 1176
Query: 2385 SSGQMQMPEP 2414
G+ P
Sbjct: 1177 DRGRFDNKRP 1186
>XP_010921974.1 PREDICTED: probable RNA-dependent RNA polymerase SHL2 [Elaeis
guineensis] XP_019706451.1 PREDICTED: probable
RNA-dependent RNA polymerase SHL2 [Elaeis guineensis]
XP_019706452.1 PREDICTED: probable RNA-dependent RNA
polymerase SHL2 [Elaeis guineensis]
Length = 1198
Score = 395 bits (1016), Expect(2) = 0.0
Identities = 219/434 (50%), Positives = 277/434 (63%), Gaps = 15/434 (3%)
Frame = +1
Query: 1 VDVKVHYTLLDDEDPWIRTVDFTDKNAFGRCFCYRILVSTKIGHAVEDCKKYLKRDSLFD 180
+ V ++LLDDEDPWIRT DFT A R YR+ S + G +E YL+ + +
Sbjct: 240 IHVTASFSLLDDEDPWIRTTDFTPGGAISRSSSYRVSFSPRYGRILEKSLAYLRERRIAE 299
Query: 181 DENEFPGLTLTVRPEG------PVPRCWWCFTVPRQESIPFKTLFLLNGLLHKGILNYHS 342
+P L VR E P P F+V +E I F +FL++ L+HKGI+N H
Sbjct: 300 ---HWPKRPLAVREEPEFGTLMPDP----FFSVQYKEGISFSIMFLVDALVHKGIVNQHQ 352
Query: 343 LNEEFYELCSSELGAM---ALRHMHIYNHQVYDAVGELKQV----LKGHKFLNDPTLTSD 501
L+EEF+ L S+ A+ ALRH+ Y ++D LK V LK K L L D
Sbjct: 353 LSEEFFALLRSQSDAVNEIALRHIWAYKTPIFDPRKRLKLVQDWLLKNPKLLKSSKLLDD 412
Query: 502 TMEIYRLAITPTKAYCLPPEIELSNRVLRQYRSVSDRFLRVSFMDENMEIMGSGSLTIAT 681
+ E+ RL ITPTKAYCLPPE+ELSNRVLR Y+ V+DRFLRV+FMDE M+ + + L
Sbjct: 413 STEVRRLVITPTKAYCLPPEVELSNRVLRNYKKVADRFLRVTFMDEGMQPLNNNVLNYYV 472
Query: 682 APIAKEVSSSS-PYRTAVFRKVKELLRKGFDLCGRHYSFLAFSANQL*DRSSWFFANGEN 858
API KE++S+S P +T VFR+V+ +L GF LCGR YSFLAFS+NQL DRS+WFFA N
Sbjct: 473 APIVKELTSNSFPQKTTVFRRVRNILLDGFHLCGRRYSFLAFSSNQLRDRSAWFFAEDSN 532
Query: 859 VTVEEI*EWMGRFYNSNVAKHAARMGQCFSSTYSTM-XXXXXXXXXXXXXXRNGYVFSDG 1035
+V I WMG+F N NVAK AARMGQCFSSTY+T+ RNGYVFSDG
Sbjct: 533 TSVMAIRNWMGKFANKNVAKCAARMGQCFSSTYATVDVPLDQFNPLLPDIERNGYVFSDG 592
Query: 1036 IGKISSDLAREVSQKLQLNMNPPSAFQIRFGGYKAVVTAWAAESGHSYKLALRPSMKKFE 1215
IGKI +LA EV++KLQL NPPSA+QIR+ G+K VV W A+ +L+LRPSM KFE
Sbjct: 593 IGKIIPELAIEVAEKLQLTENPPSAYQIRYAGFKGVVAVWPADD-DGVRLSLRPSMNKFE 651
Query: 1216 SDHQMLEIISWSRF 1257
S H MLE++SW+RF
Sbjct: 652 SSHTMLEVVSWTRF 665
Score = 300 bits (769), Expect(2) = 0.0
Identities = 149/235 (63%), Positives = 177/235 (75%), Gaps = 1/235 (0%)
Frame = +2
Query: 1256 FLPGYLNRQIITLLSSLGVDDDVFFRLQNEMIYKLGEMLDKVEVAFDVLTSSCTGVLPNM 1435
F PG+LNRQI+TLLSSL V D VF +Q+ MIYKL +ML +VAFDVLTSSC N
Sbjct: 665 FQPGFLNRQIVTLLSSLNVADSVFESMQDSMIYKLNQMLVDTDVAFDVLTSSCAEQ-GNT 723
Query: 1436 AAIVLNAGFNHEREPLLKDMLAAVRAVQLDDLLRKCRIFVDKGRWLMGCFDETEELEYGQ 1615
AAI+L+AGF + EP LK ML+ +R+ QL DLL K RIFV KGRWLMGC DE LE+GQ
Sbjct: 724 AAIMLSAGFKPQMEPHLKAMLSCIRSAQLGDLLAKARIFVPKGRWLMGCLDELGVLEHGQ 783
Query: 1616 CFIRVSTPALKDCYRKHGSTIQLNTAST-ILTGKVIVAKNPCLHPGGIRVLEAVDLPQLH 1792
CFI+ S P+L++C+ KHGS L + ++ G V +AKNPCLHPG IR+LEAVD+P LH
Sbjct: 784 CFIQSSIPSLENCFMKHGSRFSLLKKNRQVIVGTVAIAKNPCLHPGDIRILEAVDVPSLH 843
Query: 1793 HLVDCLVFPQKGLRPHPNEASGSDLDGDMYFVSWDSRLVPSSGQSWEPMDYNLGE 1957
HLVDCLVFPQKG RPH NEASGSDLDGD+YFV+WD L+P S +SW PMDY E
Sbjct: 844 HLVDCLVFPQKGDRPHANEASGSDLDGDLYFVTWDENLIPPSKKSWIPMDYTPAE 898
Score = 90.5 bits (223), Expect = 9e-15
Identities = 46/113 (40%), Positives = 71/113 (62%), Gaps = 2/113 (1%)
Frame = +3
Query: 2031 KREGEIVSGYISSISKYATRRRSDVKDNLQHAYRTLRREFRMYFE--GERSSKILDEVEE 2204
+ EGE+V+G+I S+ KY +R++ ++K+ L++AY L +EFR FE G ++ D+ +
Sbjct: 1061 RSEGEVVTGHIWSLPKYNSRKQGELKERLKNAYSALHKEFRRIFEDMGPDFQQLTDDEKS 1120
Query: 2205 SRYEAKASAWYRVAYHPIWIRNALQEGKHVSSGYLSHPLLLSFPWICAEYLAR 2363
YE +ASAWY+V YHP WI+ + E K + P LSF W+ A+YL R
Sbjct: 1121 VSYEQRASAWYQVTYHPRWIKRS-GEIKEPDGDVV--PARLSFAWVAADYLVR 1170
>XP_011081567.1 PREDICTED: RNA-dependent RNA polymerase 6 [Sesamum indicum]
Length = 1205
Score = 395 bits (1015), Expect(2) = 0.0
Identities = 217/432 (50%), Positives = 284/432 (65%), Gaps = 13/432 (3%)
Frame = +1
Query: 1 VDVKVHYTLLDDEDPWIRTVDFTDKNAFGRCFCYRILVSTKIGHAVEDCKKYLK--RDSL 174
++ V + LLDD+DPWIRT DFT A GRC YRI + G ++ +YL+ R +
Sbjct: 240 IEESVPFDLLDDDDPWIRTTDFTPSGAIGRCNTYRISARPRNGPSLFKALEYLRKLRVPV 299
Query: 175 FDDENEFPGLTLTVR--PEGPVPRCWWCFTVPRQESIPFKTLFLLNGLLHKGILNYHSLN 348
D E PG TL V+ P+ +P F + +E I FK +FL+N ++HKGI+N H ++
Sbjct: 300 LD---ESPGRTLRVQDEPDFGMPMSDPFFCLQYKEGISFKIMFLVNAVMHKGIINQHQMS 356
Query: 349 EEFYELCSS---ELGAMALRHMHIYNHQVYDAVGEL----KQVLKGHKFLNDPTLTSDTM 507
E+F++L S EL +AL+HM Y VYDA+ L K +L K L P D +
Sbjct: 357 EKFFDLLRSQPEELNIVALKHMCSYKRPVYDAIKALDFVQKWLLNNPKLLERPREMDDVV 416
Query: 508 EIYRLAITPTKAYCLPPEIELSNRVLRQYRSVSDRFLRVSFMDENMEIMGSGSLTIATAP 687
E+ RL ITP+KAYCLPPE+ELSNRVLR Y++++DRFLRV+FMDE M+ + L +P
Sbjct: 417 EVRRLIITPSKAYCLPPEVELSNRVLRNYKNIADRFLRVTFMDEAMQTLNKNVLMYYASP 476
Query: 688 IAKEVSSSS-PYRTAVFRKVKELLRKGFDLCGRHYSFLAFSANQL*DRSSWFFANGENVT 864
I ++++S+S P RT +F++VK++L GF LCGR Y+FLAFSANQL DRS+WFFA +N
Sbjct: 477 IVRDITSNSNPQRTNMFKRVKDILVNGFYLCGRKYTFLAFSANQLRDRSAWFFAEDKNTG 536
Query: 865 VEEI*EWMGRFYNSNVAKHAARMGQCFSSTYSTM-XXXXXXXXXXXXXXRNGYVFSDGIG 1041
V I WMG+F NVAK AARMGQCFSSTY+T+ RNGYVFSDGIG
Sbjct: 537 VANIKSWMGKFTQRNVAKCAARMGQCFSSTYATIEVPLTKVNSQFPDVERNGYVFSDGIG 596
Query: 1042 KISSDLAREVSQKLQLNMNPPSAFQIRFGGYKAVVTAWAAESGHSYKLALRPSMKKFESD 1221
IS+DLA EV++KLQL NPP A+QIR+ GYK VV W A+ +L LR SMKKFES+
Sbjct: 597 MISADLAIEVAEKLQLGSNPPCAYQIRYAGYKGVVARWPAKD-DGVRLYLRRSMKKFESN 655
Query: 1222 HQMLEIISWSRF 1257
H+ LEI SW+RF
Sbjct: 656 HKTLEICSWTRF 667
Score = 295 bits (754), Expect(2) = 0.0
Identities = 143/255 (56%), Positives = 187/255 (73%), Gaps = 4/255 (1%)
Frame = +2
Query: 1256 FLPGYLNRQIITLLSSLGVDDDVFFRLQNEMIYKLGEMLDKVEVAFDVLTSSCTGVLPNM 1435
F PG+LNRQI+TLLS+L V DD+F+R+Q M+ +L ML+ + AFDVLT+SCT N
Sbjct: 667 FQPGFLNRQIVTLLSALEVQDDIFWRMQETMVSRLDWMLEDSDTAFDVLTASCTDQ-GNT 725
Query: 1436 AAIVLNAGFNHEREPLLKDMLAAVRAVQLDDLLRKC---RIFVDKGRWLMGCFDETEELE 1606
AA++L+AGF + EP L+ ML ++RA QL DL + RIFV GRWLMGC DE +LE
Sbjct: 726 AALMLSAGFRPQTEPHLRGMLTSIRAAQLGDLSERATIARIFVPLGRWLMGCLDELGKLE 785
Query: 1607 YGQCFIRVSTPALKDCYRKHGSTI-QLNTASTILTGKVIVAKNPCLHPGGIRVLEAVDLP 1783
+GQCFI+VS P+++DC+ KHGS + ++TG V +AKNPCLHPG +R+LEAVD+P
Sbjct: 786 HGQCFIQVSNPSIEDCFVKHGSQFSETKKKLQVVTGLVAIAKNPCLHPGDVRILEAVDVP 845
Query: 1784 QLHHLVDCLVFPQKGLRPHPNEASGSDLDGDMYFVSWDSRLVPSSGQSWEPMDYNLGEAQ 1963
+LHHL DCLVFPQKG RPH NEASGSDLDGD+YFV+WD L+P S +SW PM+Y GE +
Sbjct: 846 ELHHLYDCLVFPQKGDRPHTNEASGSDLDGDLYFVTWDENLIPPSKRSWTPMEYAPGEVK 905
Query: 1964 EHAKDVKEEKEIGVY 2008
+ ++VK I +
Sbjct: 906 QLPREVKHSDIIDFF 920
Score = 92.8 bits (229), Expect = 2e-15
Identities = 46/112 (41%), Positives = 73/112 (65%), Gaps = 2/112 (1%)
Frame = +3
Query: 2034 REGEIVSGYISSISKYATRRRSDVKDNLQHAYRTLRREFRMYFE--GERSSKILDEVEES 2207
RE E+V+G+I S+ KY+++++ ++K+ L+HAY TLR+EFR FE G ++ D+ +
Sbjct: 1069 REEEVVTGHIWSMPKYSSKKQGELKERLKHAYSTLRKEFRKVFECMGPEFDQLWDDEKNI 1128
Query: 2208 RYEAKASAWYRVAYHPIWIRNALQEGKHVSSGYLSHPLLLSFPWICAEYLAR 2363
YE KASAWY+V Y W++ + + +G ++LSF WI A+YLAR
Sbjct: 1129 MYERKASAWYQVTYKDSWVKKSKELHAVDDAG---KSVMLSFAWIAADYLAR 1177
>ONK69832.1 uncharacterized protein A4U43_C05F27200 [Asparagus officinalis]
Length = 1174
Score = 387 bits (994), Expect(2) = 0.0
Identities = 209/424 (49%), Positives = 275/424 (64%), Gaps = 13/424 (3%)
Frame = +1
Query: 25 LLDDEDPWIRTVDFTDKNAFGRCFCYRILVSTKIGHAVEDCKKYLKRDSLFDDENEFPGL 204
LLDDEDPWIR+ DFT A GRC CYRI +S + +E Y++ + E P
Sbjct: 262 LLDDEDPWIRSTDFTPNGAIGRCNCYRISMSPRFRGKLEKALAYMRERRI---EGLRPER 318
Query: 205 TLTVRPEGPVPRC----WWCFTVPRQESIPFKTLFLLNGLLHKGILNYHSLNEEFYELC- 369
+ V+ EG ++CF +E + F +F++N L+HKGI N H L EEF+ L
Sbjct: 319 PILVKDEGNPGFVSSDPFFCFH--NKEGVSFVNMFMVNALVHKGIFNQHRLTEEFFGLLR 376
Query: 370 --SSELGAMALRHMHIYNHQVYDAVGELKQV----LKGHKFLNDPTLTSDTMEIYRLAIT 531
S L +ALRH++ Y ++DA G LK V LK + + P + D ME+ RL IT
Sbjct: 377 KKSEVLNDVALRHIYGYKKPIFDAYGRLKMVQDWLLKFPRLIKAPIPSDDNMEVRRLVIT 436
Query: 532 PTKAYCLPPEIELSNRVLRQYRSVSDRFLRVSFMDENMEIMGSGSLTIATAPIAKEVS-S 708
PTKAYCLPPEIEL+NRVLR+YR +SDRFLRV+FMDE M+ + L+ API KEV+ S
Sbjct: 437 PTKAYCLPPEIELANRVLRKYRDISDRFLRVTFMDEGMQSLNIHVLSFYPAPIVKEVTIS 496
Query: 709 SSPYRTAVFRKVKELLRKGFDLCGRHYSFLAFSANQL*DRSSWFFANGENVTVEEI*EWM 888
SS +T +FR+V++++ KGF LCGR YSFLAFS+NQL D+S+WFFA + +V++I WM
Sbjct: 497 SSSQKTTMFRRVRDIMYKGFHLCGRKYSFLAFSSNQLRDKSAWFFAEDKGTSVQDITSWM 556
Query: 889 GRFYNSNVAKHAARMGQCFSSTYSTMXXXXXXXXXXXXXXRN-GYVFSDGIGKISSDLAR 1065
G+F N NVAK+AARMGQCFSSTY+T+ N Y FSDGIGKI+ LA
Sbjct: 557 GKFQNKNVAKYAARMGQCFSSTYATVQLHPGEVNQKLPDIENEKYCFSDGIGKITPALAT 616
Query: 1066 EVSQKLQLNMNPPSAFQIRFGGYKAVVTAWAAESGHSYKLALRPSMKKFESDHQMLEIIS 1245
EV++KL+L PPSA+QIRF G K VV W + +L+LRPSM KF+S H +LE++S
Sbjct: 617 EVAEKLRLTETPPSAYQIRFAGCKGVVAVWPG-NNDGIRLSLRPSMNKFQSSHSVLEVVS 675
Query: 1246 WSRF 1257
W+RF
Sbjct: 676 WTRF 679
Score = 302 bits (774), Expect(2) = 0.0
Identities = 148/243 (60%), Positives = 184/243 (75%), Gaps = 1/243 (0%)
Frame = +2
Query: 1256 FLPGYLNRQIITLLSSLGVDDDVFFRLQNEMIYKLGEMLDKVEVAFDVLTSSCTGVLPNM 1435
F PG+LNRQI+TLLS+LGVDDDVF R+Q+ M+ KL +ML +VAFDVLTSSC N+
Sbjct: 679 FQPGFLNRQIVTLLSALGVDDDVFSRMQDSMVSKLDKMLIDPDVAFDVLTSSCAEQ-GNI 737
Query: 1436 AAIVLNAGFNHEREPLLKDMLAAVRAVQLDDLLRKCRIFVDKGRWLMGCFDETEELEYGQ 1615
AA++L+AGF + EP LK ML +R QL DL K RIFV KGRWLMGC DE LE GQ
Sbjct: 738 AAMMLSAGFTPQTEPHLKAMLLCIRLSQLKDLSSKARIFVPKGRWLMGCLDELGVLEEGQ 797
Query: 1616 CFIRVSTPALKDCYRKHGSTIQLNTAST-ILTGKVIVAKNPCLHPGGIRVLEAVDLPQLH 1792
CFI+VS+P+L++C+ KHGS + + ++ G + +AKNPCLHPG IR+LEAVD+P LH
Sbjct: 798 CFIQVSSPSLENCFLKHGSKFSGSKVNKQVIVGTIALAKNPCLHPGDIRILEAVDVPGLH 857
Query: 1793 HLVDCLVFPQKGLRPHPNEASGSDLDGDMYFVSWDSRLVPSSGQSWEPMDYNLGEAQEHA 1972
HLVDCLVFPQKG RPH NEASGSDLDGD+YFV+WD L+P S +SW P+DY EA+E
Sbjct: 858 HLVDCLVFPQKGERPHSNEASGSDLDGDLYFVTWDENLIPPSKKSWPPLDYEPAEAKEEP 917
Query: 1973 KDV 1981
+ +
Sbjct: 918 RKI 920
Score = 77.8 bits (190), Expect = 7e-11
Identities = 35/86 (40%), Positives = 61/86 (70%), Gaps = 4/86 (4%)
Frame = +3
Query: 2034 REGEIVSGYISSISKYATRRRSDVKDNLQHAYRTLRREFRMYFE---GERSSKILDEVEE 2204
+EGE+V+G+ISS+ Y +R++ +VK+ L++AY L +++R FE G S L + E
Sbjct: 1076 KEGEVVTGHISSLGSYNSRKQGEVKERLKNAYYALNKKYRRSFEEIGGHLSQLSLSDDER 1135
Query: 2205 SR-YEAKASAWYRVAYHPIWIRNALQ 2279
++ YE+KA+AWY+V YHP W++ +++
Sbjct: 1136 NQIYESKAAAWYQVTYHPKWVKKSVE 1161
>XP_015885879.1 PREDICTED: RNA-dependent RNA polymerase 6 [Ziziphus jujuba]
XP_015885880.1 PREDICTED: RNA-dependent RNA polymerase 6
[Ziziphus jujuba] XP_015885881.1 PREDICTED: RNA-dependent
RNA polymerase 6 [Ziziphus jujuba] XP_015885882.1
PREDICTED: RNA-dependent RNA polymerase 6 [Ziziphus
jujuba] XP_015885883.1 PREDICTED: RNA-dependent RNA
polymerase 6 [Ziziphus jujuba]
Length = 1197
Score = 392 bits (1008), Expect(2) = 0.0
Identities = 207/428 (48%), Positives = 273/428 (63%), Gaps = 9/428 (2%)
Frame = +1
Query: 1 VDVKVHYTLLDDEDPWIRTVDFTDKNAFGRCFCYRILVSTKIGHAVEDCKKYLKRDSLFD 180
+D V Y +LDD+DPWIRT DFT A GR YRI V + G ++ YL+ +
Sbjct: 236 IDDSVPYDMLDDDDPWIRTTDFTPSGAIGRSNSYRISVPPRHGAKLKKAISYLRERRVHH 295
Query: 181 DENEFPGLTLTVRPEGPVPRCWWCFTVPRQESIPFKTLFLLNGLLHKGILNYHSLNEEFY 360
D +P L + P+ +P F + +E I F+T+FL+N ++HKGI N H +++ F+
Sbjct: 296 DSLRWP-LRIQKEPDFDMPMSDPFFCIHYKEDIDFETMFLVNAVIHKGIFNQHQISDGFF 354
Query: 361 ELCSS---ELGAMALRHMHIYNHQVYDAVGELKQV----LKGHKFLNDPTLTSDTMEIYR 519
L + E+ AL+H+ Y V+DA LK V L+ K P D E+ R
Sbjct: 355 NLLRNQMKEVNVAALKHISSYKRPVFDACRRLKVVQEWLLRDPKLFKKPKRLDDIAEVRR 414
Query: 520 LAITPTKAYCLPPEIELSNRVLRQYRSVSDRFLRVSFMDENMEIMGSGSLTIATAPIAKE 699
L ITPT+AYCLPPE+ELSNRVLR Y+ V+DRFLRV+FMDE M+ + S LT A I +E
Sbjct: 415 LVITPTRAYCLPPEVELSNRVLRNYKEVADRFLRVTFMDEGMQTINSNVLTYHVASIVRE 474
Query: 700 VSSSS-PYRTAVFRKVKELLRKGFDLCGRHYSFLAFSANQL*DRSSWFFANGENVTVEEI 876
++S+S P +T VF+++K +L GF LCGR YSFLAFS+NQL DRS+WFFA +N+ V E+
Sbjct: 475 ITSNSFPQKTKVFQRIKSILTNGFYLCGRKYSFLAFSSNQLRDRSAWFFAEDKNINVFEV 534
Query: 877 *EWMGRFYNSNVAKHAARMGQCFSSTYSTM-XXXXXXXXXXXXXXRNGYVFSDGIGKISS 1053
WMGRF N NVAK AARMG CFSSTY+++ RNGY FSDGIGKI+
Sbjct: 535 KSWMGRFTNRNVAKCAARMGLCFSSTYASVEVPSTQVNRGFPDIKRNGYTFSDGIGKITP 594
Query: 1054 DLAREVSQKLQLNMNPPSAFQIRFGGYKAVVTAWAAESGHSYKLALRPSMKKFESDHQML 1233
DLA EV+QKL+L NPP A+QIR+ G+K VV W +L+LRPSM KF+S+H +L
Sbjct: 595 DLALEVAQKLKLERNPPCAYQIRYAGFKGVVACWKPTDDDGARLSLRPSMDKFQSNHTIL 654
Query: 1234 EIISWSRF 1257
EI SW+RF
Sbjct: 655 EICSWTRF 662
Score = 296 bits (759), Expect(2) = 0.0
Identities = 141/246 (57%), Positives = 183/246 (74%), Gaps = 1/246 (0%)
Frame = +2
Query: 1256 FLPGYLNRQIITLLSSLGVDDDVFFRLQNEMIYKLGEMLDKVEVAFDVLTSSCTGVLPNM 1435
F PG+LNRQI+TLLS+L V D++F+ +Q MI+KL +ML ++AFDVLT+SC N+
Sbjct: 662 FQPGFLNRQIVTLLSALNVSDEIFWNMQETMIFKLNQMLIDTDIAFDVLTASCAEQ-GNV 720
Query: 1436 AAIVLNAGFNHEREPLLKDMLAAVRAVQLDDLLRKCRIFVDKGRWLMGCFDETEELEYGQ 1615
AAI+L+AGF+ ++EP L+ ML +RA QL L K RIFV GRWLMGC DE LE GQ
Sbjct: 721 AAIMLSAGFSPQKEPHLRGMLTCIRAAQLWGLREKARIFVPSGRWLMGCLDELGVLEQGQ 780
Query: 1616 CFIRVSTPALKDCYRKHGSTI-QLNTASTILTGKVIVAKNPCLHPGGIRVLEAVDLPQLH 1792
CFI+VS P+L++C+ KHGS + N ++ G V++AKNPCLHPG +R+LEAVD+P LH
Sbjct: 781 CFIQVSNPSLENCFSKHGSRFNERNDNLEVIKGFVVIAKNPCLHPGDVRILEAVDVPDLH 840
Query: 1793 HLVDCLVFPQKGLRPHPNEASGSDLDGDMYFVSWDSRLVPSSGQSWEPMDYNLGEAQEHA 1972
HL DCLVFPQKG RPH NEASGSDLDGD+YFV+WD L+P S +SW PM Y+ E ++
Sbjct: 841 HLYDCLVFPQKGERPHTNEASGSDLDGDLYFVTWDENLIPPSKKSWIPMQYDAAETKQLT 900
Query: 1973 KDVKEE 1990
+ V +E
Sbjct: 901 RPVTQE 906
Score = 98.2 bits (243), Expect = 4e-17
Identities = 50/129 (38%), Positives = 82/129 (63%), Gaps = 2/129 (1%)
Frame = +3
Query: 2034 REGEIVSGYISSISKYATRRRSDVKDNLQHAYRTLRREFRMYFE--GERSSKILDEVEES 2207
RE E+V+G+I S+ KY++R++ ++K+ L+H+Y L++EFR FE E+ ++ D+ +
Sbjct: 1061 REEEVVTGHIWSMPKYSSRKQGELKERLKHSYSALKKEFRQIFEKMEEKFEELSDDEKNI 1120
Query: 2208 RYEAKASAWYRVAYHPIWIRNALQEGKHVSSGYLSHPLLLSFPWICAEYLARNQELRSGS 2387
YE KASAWY+V YHP W++ +L + S Y ++LSF WI A+YL R ++R
Sbjct: 1121 IYEQKASAWYQVTYHPEWVKKSLDLQEPDGSRY---AVMLSFAWIAADYLTR-IKIRCRG 1176
Query: 2388 SGQMQMPEP 2414
G + +P
Sbjct: 1177 VGNVDCDKP 1185
>XP_020098906.1 probable RNA-dependent RNA polymerase SHL2 [Ananas comosus]
XP_020098907.1 probable RNA-dependent RNA polymerase SHL2
[Ananas comosus]
Length = 1234
Score = 392 bits (1007), Expect(2) = 0.0
Identities = 213/427 (49%), Positives = 273/427 (63%), Gaps = 12/427 (2%)
Frame = +1
Query: 13 VHYTLLDDEDPWIRTVDFTDKNAFGRCFCYRILVSTKIGHAVEDCKKYLKRDSLFDDENE 192
V + LLDDEDPWIRT DFT A GRC Y+I +S + G +E YL++ + D
Sbjct: 275 VPFNLLDDEDPWIRTTDFTPTGAVGRCSSYKISLSPRFGAKLERALDYLRKRRIPDYR-- 332
Query: 193 FPGLTLTVRPE---GPVPRCWWCFTVPRQESIPFKTLFLLNGLLHKGILNYHSLNEEFYE 363
P L VRPE G P F++ E + F LFL+N L+HKGI+N H L+++F+
Sbjct: 333 -PNRPLAVRPEPDFGFSPATDHFFSIHHAEGVGFPILFLVNALVHKGIVNQHQLSDQFFG 391
Query: 364 LCSSELGAM---ALRHMHIYNHQVYDAVGELKQV----LKGHKFLNDPTLTSDTMEIYRL 522
L + G + ALRH+ Y ++DA LK V L K L L D E+ RL
Sbjct: 392 LLRGQSGVVNETALRHIWSYKRPIFDAYRRLKLVQEWLLNNPKLLRSSKLADDNAEVRRL 451
Query: 523 AITPTKAYCLPPEIELSNRVLRQYRSVSDRFLRVSFMDENMEIMGSGSLTIATAPIAKEV 702
ITPTKAYC+PP IELSNRVLR+Y+ V+DRFLRV+F DE M+ + + L API +++
Sbjct: 452 VITPTKAYCIPPAIELSNRVLRRYKEVADRFLRVTFTDEGMQQLNNSVLNYYVAPIVRDI 511
Query: 703 SSSS-PYRTAVFRKVKELLRKGFDLCGRHYSFLAFSANQL*DRSSWFFANGENVTVEEI* 879
+S+S +T VF++VK +L GF LCGR YSFLAFS+NQL DRS+WFFA TV I
Sbjct: 512 TSNSYQQKTTVFKRVKSILMDGFYLCGRRYSFLAFSSNQLRDRSAWFFAEDSKTTVAAIT 571
Query: 880 EWMGRFYNSNVAKHAARMGQCFSSTYSTMXXXXXXXXXXXXXXR-NGYVFSDGIGKISSD 1056
+WMGRF N NVAK AARMGQCFSSTY+T+ NGY+FSDGIGKI+ D
Sbjct: 572 KWMGRFSNRNVAKCAARMGQCFSSTYATVEVPLREVNPVLPDIEGNGYIFSDGIGKITPD 631
Query: 1057 LAREVSQKLQLNMNPPSAFQIRFGGYKAVVTAWAAESGHSYKLALRPSMKKFESDHQMLE 1236
LA EV++KL+L NPPSA+QIR+ G K VV W + +L+LRPSM KFES+H +LE
Sbjct: 632 LAMEVAEKLKLTDNPPSAYQIRYAGCKGVVAVWPGDV-DGIRLSLRPSMNKFESNHTVLE 690
Query: 1237 IISWSRF 1257
++SWSRF
Sbjct: 691 VVSWSRF 697
Score = 295 bits (755), Expect(2) = 0.0
Identities = 146/252 (57%), Positives = 184/252 (73%), Gaps = 1/252 (0%)
Frame = +2
Query: 1256 FLPGYLNRQIITLLSSLGVDDDVFFRLQNEMIYKLGEMLDKVEVAFDVLTSSCTGVLPNM 1435
F PG+LNRQIITLLSSL V D VF R+Q MI KL EML +VAF+VLT+SC N
Sbjct: 697 FQPGFLNRQIITLLSSLSVPDSVFARMQESMICKLNEMLVDTDVAFEVLTTSCAEQ-GNT 755
Query: 1436 AAIVLNAGFNHEREPLLKDMLAAVRAVQLDDLLRKCRIFVDKGRWLMGCFDETEELEYGQ 1615
AA++L+AGF + EP LK ML+ +R+ QL DLL K RIFV KGRWLMGC DE LE+GQ
Sbjct: 756 AAMMLSAGFKPQTEPHLKAMLSCIRSAQLGDLLAKTRIFVPKGRWLMGCLDELGVLEHGQ 815
Query: 1616 CFIRVSTPALKDCYRKHGSTIQLNTAST-ILTGKVIVAKNPCLHPGGIRVLEAVDLPQLH 1792
CFI++S+P+L++C+ KHG+ + ++ G V++AKNPCLHPG +R+LEAVD+P LH
Sbjct: 816 CFIQMSSPSLQNCFIKHGTRFSGTKMNRQVIVGAVVIAKNPCLHPGDVRILEAVDVPGLH 875
Query: 1793 HLVDCLVFPQKGLRPHPNEASGSDLDGDMYFVSWDSRLVPSSGQSWEPMDYNLGEAQEHA 1972
LVDCLVFPQKG RPH NEASGSDLDGD+YFV+WD L+P +SW PMDY EA++
Sbjct: 876 QLVDCLVFPQKGDRPHANEASGSDLDGDLYFVTWDGDLIPPGKKSWVPMDYTAAEAKQLP 935
Query: 1973 KDVKEEKEIGVY 2008
+ V + I +
Sbjct: 936 RTVSPQDIIDFF 947
Score = 90.9 bits (224), Expect = 7e-15
Identities = 49/115 (42%), Positives = 73/115 (63%), Gaps = 6/115 (5%)
Frame = +3
Query: 2037 EGEIVSGYISSISKYATRRRSDVKDNLQHAYRTLRREFRMYFE--GERSSKILDEVEESR 2210
EGE+V+G+I S+ K +R++ ++K+ L++AY LR+EFR FE G +++ D+ +
Sbjct: 1099 EGEVVTGHIWSMPKNNSRKQGELKERLKNAYTALRKEFRNVFETAGPDFNELSDDEKSVW 1158
Query: 2211 YEAKASAWYRVAYHPIWIRNALQ----EGKHVSSGYLSHPLLLSFPWICAEYLAR 2363
YE KASAWY+V YHP W+R + + EG+ V P LSF WI A+YL R
Sbjct: 1159 YEQKASAWYQVTYHPKWLRKSCEMRELEGEVV-------PTRLSFAWIAADYLVR 1206
>XP_002324295.1 SILENCING DEFECTIVE 1 family protein [Populus trichocarpa] EEF02860.1
SILENCING DEFECTIVE 1 family protein [Populus
trichocarpa]
Length = 1200
Score = 395 bits (1015), Expect(2) = 0.0
Identities = 205/430 (47%), Positives = 282/430 (65%), Gaps = 11/430 (2%)
Frame = +1
Query: 1 VDVKVHYTLLDDEDPWIRTVDFTDKNAFGRCFCYRILVSTKIGHAVEDCKKYLK--RDSL 174
++ V + LLDD+DPWIRT DFT A GRC YR+ + + G + KYLK R +
Sbjct: 237 IEAWVPFDLLDDDDPWIRTTDFTASGAIGRCHSYRVSIPPRHGSKLRKAVKYLKERRVQV 296
Query: 175 FDDENEFPGLTLTVRPEGPVPRCWWCFTVPRQESIPFKTLFLLNGLLHKGILNYHSLNEE 354
+EN + + P+ +P F + +E I F+ LFL+N ++HKGI N H L+ +
Sbjct: 297 LQEENHRRRIRILDEPDFGMPMSDPFFCIHHKEGIAFEVLFLVNAVMHKGIFNQHQLSND 356
Query: 355 FYELCSS---ELGAMALRHMHIYNHQVYDAVGELKQV----LKGHKFLNDPTLTSDTMEI 513
F++L + E+ AL+H+ Y V++A LK V LK +P D +EI
Sbjct: 357 FFDLLRNQHTEVNVSALKHICTYRRPVFNAYRRLKAVQEWLLKNPNLFKNPKQLGDVVEI 416
Query: 514 YRLAITPTKAYCLPPEIELSNRVLRQYRSVSDRFLRVSFMDENMEIMGSGSLTIATAPIA 693
RL ITPTKAYCLPPE+ELSNRVLR+Y+ V+DRFLRV+FMDE ++ M S L API
Sbjct: 417 RRLVITPTKAYCLPPEVELSNRVLRKYKDVADRFLRVTFMDEGLQRMNSNVLNYYVAPIV 476
Query: 694 KEVSSSS-PYRTAVFRKVKELLRKGFDLCGRHYSFLAFSANQL*DRSSWFFANGENVTVE 870
++++S+S P +T +F++V+ +L +GF LCGR YSFLAFSANQL D+S+WFF+ N++V
Sbjct: 477 RDITSNSFPQKTRIFKRVRSILTEGFYLCGRRYSFLAFSANQLRDQSAWFFSEERNISVL 536
Query: 871 EI*EWMGRFYNSNVAKHAARMGQCFSSTYSTM-XXXXXXXXXXXXXXRNGYVFSDGIGKI 1047
++ WMG+F N N+AK AARMGQCFSSTY+T+ RNGYVFSDGIG I
Sbjct: 537 DVKSWMGKFTNRNIAKCAARMGQCFSSTYATIEVPPEEVNSDLPDIERNGYVFSDGIGII 596
Query: 1048 SSDLAREVSQKLQLNMNPPSAFQIRFGGYKAVVTAWAAESGHSYKLALRPSMKKFESDHQ 1227
+ DLAREV++KL+L+++PP A+QIR+ G K VV W + G +L+LRPSM KF+S+H
Sbjct: 597 TPDLAREVAEKLKLDIDPPCAYQIRYAGCKGVVACWPGK-GDGVRLSLRPSMNKFQSNHT 655
Query: 1228 MLEIISWSRF 1257
LEI SW+RF
Sbjct: 656 TLEICSWTRF 665
Score = 289 bits (740), Expect(2) = 0.0
Identities = 144/246 (58%), Positives = 178/246 (72%), Gaps = 1/246 (0%)
Frame = +2
Query: 1256 FLPGYLNRQIITLLSSLGVDDDVFFRLQNEMIYKLGEMLDKVEVAFDVLTSSCTGVLPNM 1435
F PG+LNRQIITLLS+L V D VF+++Q M+ KL +M +VAFDVLT+SC N+
Sbjct: 665 FQPGFLNRQIITLLSTLNVPDAVFWKMQETMVSKLNQMFVNSDVAFDVLTASCADQ-GNV 723
Query: 1436 AAIVLNAGFNHEREPLLKDMLAAVRAVQLDDLLRKCRIFVDKGRWLMGCFDETEELEYGQ 1615
AAI+L+AGF +REP L+ ML VRA QL DL K RIFV GRWLMGC DE LE GQ
Sbjct: 724 AAIMLSAGFKPDREPHLRGMLTCVRAAQLWDLREKTRIFVPSGRWLMGCLDELGMLEQGQ 783
Query: 1616 CFIRVSTPALKDCYRKHGSTI-QLNTASTILTGKVIVAKNPCLHPGGIRVLEAVDLPQLH 1792
CFI+VS +L+ C+ KHG+ + ++ G V++AKNPCLHPG +RVLEAVD+P LH
Sbjct: 784 CFIQVSNSSLEKCFMKHGAKFSEAEKNLQVIKGTVVIAKNPCLHPGDVRVLEAVDVPGLH 843
Query: 1793 HLVDCLVFPQKGLRPHPNEASGSDLDGDMYFVSWDSRLVPSSGQSWEPMDYNLGEAQEHA 1972
HL DCLVFPQKG RPH NEASGSDLDGD+YFV+WD L+P S +SW PM Y+ EA+ A
Sbjct: 844 HLYDCLVFPQKGERPHTNEASGSDLDGDLYFVTWDENLIPPSKRSWIPMQYDAAEAKLLA 903
Query: 1973 KDVKEE 1990
+ V +
Sbjct: 904 RPVNHQ 909
Score = 100 bits (248), Expect = 1e-17
Identities = 52/130 (40%), Positives = 88/130 (67%), Gaps = 2/130 (1%)
Frame = +3
Query: 2031 KREGEIVSGYISSISKYATRRRSDVKDNLQHAYRTLRREFRMYFEG-ERSSKILDEVEES 2207
KRE E+V+G+I S+ KY++R++ ++KD L+H+Y +L++EFR FE + + L++ E++
Sbjct: 1063 KREEEVVTGHIWSMPKYSSRKQGELKDRLKHSYNSLKKEFRQIFEKMDLEFEQLEDGEKN 1122
Query: 2208 R-YEAKASAWYRVAYHPIWIRNALQEGKHVSSGYLSHPLLLSFPWICAEYLARNQELRSG 2384
+ YE KASAWY+V YHP W++ +L+ +G ++LSF WI A+YLAR ++R
Sbjct: 1123 KLYEQKASAWYQVVYHPHWVKKSLELQDPDGAG---TSVMLSFAWIAADYLAR-IKIRHR 1178
Query: 2385 SSGQMQMPEP 2414
+G + +P
Sbjct: 1179 ETGNVDSAKP 1188
>OAY64204.1 putative RNA-dependent RNA polymerase SHL2 [Ananas comosus]
Length = 1234
Score = 388 bits (997), Expect(2) = 0.0
Identities = 212/427 (49%), Positives = 272/427 (63%), Gaps = 12/427 (2%)
Frame = +1
Query: 13 VHYTLLDDEDPWIRTVDFTDKNAFGRCFCYRILVSTKIGHAVEDCKKYLKRDSLFDDENE 192
V + LLDDEDPWIRT DFT A GRC Y+I +S + G +E YL++ + D
Sbjct: 275 VPFNLLDDEDPWIRTTDFTPTGAVGRCSSYKISLSPRFGAKLERALDYLRKRRIPDYR-- 332
Query: 193 FPGLTLTVRPE---GPVPRCWWCFTVPRQESIPFKTLFLLNGLLHKGILNYHSLNEEFYE 363
P L VRPE G P F++ E + F LFL+N L+HKGI+N H L+++F+
Sbjct: 333 -PNRPLAVRPEPDFGFSPATDHFFSIHHAEGVGFPILFLVNALVHKGIVNQHQLSDQFFG 391
Query: 364 LCSSELGAM---ALRHMHIYNHQVYDAVGELKQV----LKGHKFLNDPTLTSDTMEIYRL 522
L + G + ALRH+ Y ++DA LK V L K L L D E+ RL
Sbjct: 392 LLRGQSGVVNETALRHIWSYKRPIFDAYRRLKLVQEWLLNNPKLLRSSKLADDNAEVRRL 451
Query: 523 AITPTKAYCLPPEIELSNRVLRQYRSVSDRFLRVSFMDENMEIMGSGSLTIATAPIAKEV 702
ITPTKAYC+PP IELSNRVLR+Y+ V+DRFLRV+F DE M+ + + L API +++
Sbjct: 452 VITPTKAYCIPPAIELSNRVLRRYKEVADRFLRVTFTDEGMQQLNNSVLNYYVAPIVRDI 511
Query: 703 SSSS-PYRTAVFRKVKELLRKGFDLCGRHYSFLAFSANQL*DRSSWFFANGENVTVEEI* 879
+S+S +T VF++VK +L GF LCGR YSFLAFS+NQL DRS+WFFA TV I
Sbjct: 512 TSNSYQQKTTVFKRVKSILMDGFYLCGRRYSFLAFSSNQLRDRSAWFFAEDSKTTVAAIT 571
Query: 880 EWMGRFYNSNVAKHAARMGQCFSSTYSTMXXXXXXXXXXXXXXR-NGYVFSDGIGKISSD 1056
+WMGRF N NVAK AARMGQCFSSTY+T+ NGY+FSDGIGKI+ D
Sbjct: 572 KWMGRFSNRNVAKCAARMGQCFSSTYATVEVPLREVNPVLPDIEGNGYIFSDGIGKITPD 631
Query: 1057 LAREVSQKLQLNMNPPSAFQIRFGGYKAVVTAWAAESGHSYKLALRPSMKKFESDHQMLE 1236
LA EV++KL+L NPPSA+QIR+ G K VV W + +L+LR SM KFES+H +LE
Sbjct: 632 LAMEVAEKLKLTDNPPSAYQIRYAGCKGVVAVWPGDV-DGIRLSLRLSMNKFESNHTVLE 690
Query: 1237 IISWSRF 1257
++SWSRF
Sbjct: 691 VVSWSRF 697
Score = 295 bits (755), Expect(2) = 0.0
Identities = 146/252 (57%), Positives = 184/252 (73%), Gaps = 1/252 (0%)
Frame = +2
Query: 1256 FLPGYLNRQIITLLSSLGVDDDVFFRLQNEMIYKLGEMLDKVEVAFDVLTSSCTGVLPNM 1435
F PG+LNRQIITLLSSL V D VF R+Q MI KL EML +VAF+VLT+SC N
Sbjct: 697 FQPGFLNRQIITLLSSLSVPDSVFARMQESMICKLNEMLVDTDVAFEVLTTSCAEQ-GNT 755
Query: 1436 AAIVLNAGFNHEREPLLKDMLAAVRAVQLDDLLRKCRIFVDKGRWLMGCFDETEELEYGQ 1615
AA++L+AGF + EP LK ML+ +R+ QL DLL K RIFV KGRWLMGC DE LE+GQ
Sbjct: 756 AAMMLSAGFKPQTEPHLKAMLSCIRSAQLGDLLAKTRIFVPKGRWLMGCLDELGVLEHGQ 815
Query: 1616 CFIRVSTPALKDCYRKHGSTIQLNTAST-ILTGKVIVAKNPCLHPGGIRVLEAVDLPQLH 1792
CFI++S+P+L++C+ KHG+ + ++ G V++AKNPCLHPG +R+LEAVD+P LH
Sbjct: 816 CFIQMSSPSLQNCFIKHGTRFSGTKMNRQVIVGAVVIAKNPCLHPGDVRILEAVDVPGLH 875
Query: 1793 HLVDCLVFPQKGLRPHPNEASGSDLDGDMYFVSWDSRLVPSSGQSWEPMDYNLGEAQEHA 1972
LVDCLVFPQKG RPH NEASGSDLDGD+YFV+WD L+P +SW PMDY EA++
Sbjct: 876 QLVDCLVFPQKGDRPHANEASGSDLDGDLYFVTWDGDLIPPGKKSWVPMDYTAAEAKQLP 935
Query: 1973 KDVKEEKEIGVY 2008
+ V + I +
Sbjct: 936 RTVSPQDIIDFF 947
Score = 90.9 bits (224), Expect = 7e-15
Identities = 49/115 (42%), Positives = 73/115 (63%), Gaps = 6/115 (5%)
Frame = +3
Query: 2037 EGEIVSGYISSISKYATRRRSDVKDNLQHAYRTLRREFRMYFE--GERSSKILDEVEESR 2210
EGE+V+G+I S+ K +R++ ++K+ L++AY LR+EFR FE G +++ D+ +
Sbjct: 1099 EGEVVTGHIWSMPKNNSRKQGELKERLKNAYTALRKEFRNVFETAGPDFNELSDDEKSVW 1158
Query: 2211 YEAKASAWYRVAYHPIWIRNALQ----EGKHVSSGYLSHPLLLSFPWICAEYLAR 2363
YE KASAWY+V YHP W+R + + EG+ V P LSF WI A+YL R
Sbjct: 1159 YEQKASAWYQVTYHPKWLRKSCEMRELEGEVV-------PTRLSFAWIAADYLVR 1206
>OAY27377.1 hypothetical protein MANES_16G121400 [Manihot esculenta]
Length = 1199
Score = 390 bits (1003), Expect(2) = 0.0
Identities = 206/428 (48%), Positives = 279/428 (65%), Gaps = 9/428 (2%)
Frame = +1
Query: 1 VDVKVHYTLLDDEDPWIRTVDFTDKNAFGRCFCYRILVSTKIGHAVEDCKKYLKRDSLFD 180
++V + LLDD+DPWIRT DFT A GRC YR+ + + G + YLK +
Sbjct: 238 IEVLAPFNLLDDDDPWIRTTDFTPSGAIGRCNSYRVSIPPRHGAKLNRALNYLKERRVQL 297
Query: 181 DENEFPGLTLTVRPEGPVPRCWWCFTVPRQESIPFKTLFLLNGLLHKGILNYHSLNEEFY 360
+ + P L + PE +P F + +E I F+ +FL+N ++HKGI N H L++ F+
Sbjct: 298 EFLKMP-LKNSNEPEYGMPMSDAFFCIHHKEGIAFEVMFLVNAVMHKGIFNQHQLSDSFF 356
Query: 361 ELCSSE---LGAMALRHMHIYNHQVYDAVGELKQV----LKGHKFLNDPTLTSDTMEIYR 519
+L S+ + AL+H+ Y V+DA LK V L K P D +EI R
Sbjct: 357 DLLRSQPLDVNLSALKHICSYKRPVFDAYCCLKAVQQWLLNNPKLFKSPKQLDDIVEIRR 416
Query: 520 LAITPTKAYCLPPEIELSNRVLRQYRSVSDRFLRVSFMDENMEIMGSGSLTIATAPIAKE 699
LAITPT+AYCLPPE+ELSNRVLR+Y+ ++DRFLRV+FMDE ++ + + +LT API +E
Sbjct: 417 LAITPTRAYCLPPEVELSNRVLRKYKDIADRFLRVTFMDEGLQTINANTLTYYVAPIVRE 476
Query: 700 VSSSS-PYRTAVFRKVKELLRKGFDLCGRHYSFLAFSANQL*DRSSWFFANGENVTVEEI 876
++S+S +T VF++VK +L GF LCGR YSFLAFS+NQL DRS+WFFA ++V +I
Sbjct: 477 ITSNSFSQKTRVFKRVKGILTDGFYLCGRRYSFLAFSSNQLRDRSAWFFAENAEISVHQI 536
Query: 877 *EWMGRFYNSNVAKHAARMGQCFSSTYSTM-XXXXXXXXXXXXXXRNGYVFSDGIGKISS 1053
WMGRF N N+AK AARMGQCFSSTY+T+ RNGY+FSDGIG I+
Sbjct: 537 RSWMGRFTNRNIAKCAARMGQCFSSTYATVEVPSGEVNLSLPDIERNGYIFSDGIGTITP 596
Query: 1054 DLAREVSQKLQLNMNPPSAFQIRFGGYKAVVTAWAAESGHSYKLALRPSMKKFESDHQML 1233
DLA+EV++KL+L+ NPP A+QIR+ G K VV W A+ G +L+LRPSM KF+S+H L
Sbjct: 597 DLAKEVAEKLKLDANPPCAYQIRYAGCKGVVACWPAQ-GDGIRLSLRPSMNKFQSNHTTL 655
Query: 1234 EIISWSRF 1257
EI SW+RF
Sbjct: 656 EICSWTRF 663
Score = 290 bits (742), Expect(2) = 0.0
Identities = 141/252 (55%), Positives = 182/252 (72%), Gaps = 1/252 (0%)
Frame = +2
Query: 1256 FLPGYLNRQIITLLSSLGVDDDVFFRLQNEMIYKLGEMLDKVEVAFDVLTSSCTGVLPNM 1435
F PG+LNRQIITLLS L V D++F+ +Q +M+ KL +ML +VAFDV+T+SC N
Sbjct: 663 FQPGFLNRQIITLLSVLQVPDEIFWEMQFDMVSKLDQMLMDADVAFDVITASCAEQ-GNT 721
Query: 1436 AAIVLNAGFNHEREPLLKDMLAAVRAVQLDDLLRKCRIFVDKGRWLMGCFDETEELEYGQ 1615
AAI+L+AGF ++EP L+ ML +RA QL L K RIFV GRWLMGC DE LE GQ
Sbjct: 722 AAIMLSAGFKPQKEPHLQGMLTCIRAAQLWGLREKARIFVSSGRWLMGCLDELGVLEQGQ 781
Query: 1616 CFIRVSTPALKDCYRKHGSTI-QLNTASTILTGKVIVAKNPCLHPGGIRVLEAVDLPQLH 1792
CFI+VS P+L++C+ KHGS ++ ++ G V++AKNPCLHPG +R+LEAVD P+LH
Sbjct: 782 CFIQVSNPSLENCFLKHGSRFSEIKKNLEVIKGTVVIAKNPCLHPGDVRILEAVDAPELH 841
Query: 1793 HLVDCLVFPQKGLRPHPNEASGSDLDGDMYFVSWDSRLVPSSGQSWEPMDYNLGEAQEHA 1972
HL DCL+FPQKG RPH NEASGSDLDGD+YFV+WD L+P S +SW PM YN EA+
Sbjct: 842 HLHDCLIFPQKGDRPHTNEASGSDLDGDLYFVTWDENLIPPSKRSWTPMQYNAAEAKVLN 901
Query: 1973 KDVKEEKEIGVY 2008
+ V+ + I +
Sbjct: 902 RPVRSQDIIDFF 913
Score = 92.4 bits (228), Expect = 2e-15
Identities = 48/114 (42%), Positives = 72/114 (63%), Gaps = 3/114 (2%)
Frame = +3
Query: 2031 KREGEIVSGYISSISKYATRRRSDVKDNLQHAYRTLRREFRMYFE--GERSSKILDEVEE 2204
KRE E+V+G+I S+ KY +R+ ++K+ L+ +Y L++EFR FE ++ D+ +
Sbjct: 1062 KREEEVVTGHIWSMPKYNSRKNGELKERLKQSYSGLKKEFRQVFEKMDLDFEQLSDDEKN 1121
Query: 2205 SRYEAKASAWYRVAYHPIWIRNALQ-EGKHVSSGYLSHPLLLSFPWICAEYLAR 2363
YE KASAWY+VAYHP WI+ +L+ +G +LSF WI A+YLAR
Sbjct: 1122 LLYERKASAWYQVAYHPTWIKKSLELQGPEADDS----AAMLSFAWIAADYLAR 1171
>XP_008219491.1 PREDICTED: RNA-dependent RNA polymerase 6 [Prunus mume]
Length = 1196
Score = 390 bits (1002), Expect(2) = 0.0
Identities = 205/427 (48%), Positives = 279/427 (65%), Gaps = 8/427 (1%)
Frame = +1
Query: 1 VDVKVHYTLLDDEDPWIRTVDFTDKNAFGRCFCYRILVSTKIGHAVEDCKKYLKRDSLFD 180
+D V + LLDD+DPWIRT DFT A GRC YR+L+ + G ++ YL+ + +
Sbjct: 236 IDQSVPFDLLDDDDPWIRTTDFTPSGAIGRCNSYRVLIPPRHGAKLKKAMNYLRERRVKE 295
Query: 181 DENEFPGLTLTVRPEGPVPRCWWCFTVPRQESIPFKTLFLLNGLLHKGILNYHSLNEEFY 360
++P + P+ + F++ +E I F+ +FL+N ++HKG +N H L++ F+
Sbjct: 296 VCIKWPP-RIQDEPDFGMSNTEPFFSIQYEEDISFEIMFLVNAVMHKGTVNQHQLSDSFF 354
Query: 361 ELCSS---ELGAMALRHMHIYNHQVYDAVGELKQV----LKGHKFLNDPTLTSDTMEIYR 519
L S E+ AL+H+ Y + V+DA LK V LK K + DP D +E+ R
Sbjct: 355 HLLRSQPKEINVAALKHLCSYRNPVFDACERLKVVQDWLLKNPKLVKDPKRLDDIVEVRR 414
Query: 520 LAITPTKAYCLPPEIELSNRVLRQYRSVSDRFLRVSFMDENMEIMGSGSLTIATAPIAKE 699
L ITPTKAYCLPPE+ELSNRVLR+Y+ V+DRFLRV+FMDE M+ + S L API KE
Sbjct: 415 LVITPTKAYCLPPEVELSNRVLRKYKEVADRFLRVTFMDEGMQKINSNVLNYYVAPIVKE 474
Query: 700 VSSSS-PYRTAVFRKVKELLRKGFDLCGRHYSFLAFSANQL*DRSSWFFANGENVTVEEI 876
++S+S +T VF++ + +L GF LCGR Y+FLAFS+NQL DRS+WFFA N++V +I
Sbjct: 475 ITSNSFLQKTNVFKRFRNILNDGFYLCGRKYTFLAFSSNQLRDRSAWFFAECVNISVGKI 534
Query: 877 *EWMGRFYNSNVAKHAARMGQCFSSTYSTMXXXXXXXXXXXXXXRNGYVFSDGIGKISSD 1056
WMG+F N NVAK AARMGQCFSSTY+T+ RNGY+FSDGIG I+ D
Sbjct: 535 TSWMGKFNNKNVAKCAARMGQCFSSTYATVEVPSSEVNDIPDIERNGYIFSDGIGMITPD 594
Query: 1057 LAREVSQKLQLNMNPPSAFQIRFGGYKAVVTAWAAESGHSYKLALRPSMKKFESDHQMLE 1236
LA EV++KL+L+ NPP A+QIRF G K VV W ++ G ++L+LR SM KFES H LE
Sbjct: 595 LALEVAEKLKLDRNPPCAYQIRFAGCKGVVACWPSK-GDRFRLSLRTSMNKFESKHATLE 653
Query: 1237 IISWSRF 1257
I SW+R+
Sbjct: 654 ICSWTRY 660
Score = 290 bits (743), Expect(2) = 0.0
Identities = 142/252 (56%), Positives = 183/252 (72%), Gaps = 1/252 (0%)
Frame = +2
Query: 1256 FLPGYLNRQIITLLSSLGVDDDVFFRLQNEMIYKLGEMLDKVEVAFDVLTSSCTGVLPNM 1435
+ PG+LNRQIITLLS+L V+D++F+R+Q +M+ KL +ML +VAFDVLTSSC N
Sbjct: 660 YQPGFLNRQIITLLSTLKVEDEIFWRMQEKMVLKLNQMLVDTDVAFDVLTSSCAEQ-GNA 718
Query: 1436 AAIVLNAGFNHEREPLLKDMLAAVRAVQLDDLLRKCRIFVDKGRWLMGCFDETEELEYGQ 1615
AAI+L+AGF + EP L+ ML ++A QL L K RIFV GRWLMG DE LE GQ
Sbjct: 719 AAIMLSAGFKPQTEPHLRGMLTCIQAAQLWGLREKARIFVHSGRWLMGVLDELGVLEQGQ 778
Query: 1616 CFIRVSTPALKDCYRKHGSTI-QLNTASTILTGKVIVAKNPCLHPGGIRVLEAVDLPQLH 1792
CF++VSTP+L+ C+ KHGS+ Q+ ++ G V++AKNPCLHPG IR+LEAVD P LH
Sbjct: 779 CFVQVSTPSLESCFAKHGSSFAQIERNLQVIKGYVVIAKNPCLHPGDIRILEAVDAPGLH 838
Query: 1793 HLVDCLVFPQKGLRPHPNEASGSDLDGDMYFVSWDSRLVPSSGQSWEPMDYNLGEAQEHA 1972
HL DCLVFPQKG RPH +EASGSDLDGD+YFV+WD L+P S +SW PM Y+ EA+
Sbjct: 839 HLYDCLVFPQKGDRPHTDEASGSDLDGDLYFVTWDENLIPPSKKSWMPMQYDPAEAKRQG 898
Query: 1973 KDVKEEKEIGVY 2008
+ V ++ I +
Sbjct: 899 RPVTQQDIIDFF 910
Score = 88.2 bits (217), Expect = 5e-14
Identities = 48/115 (41%), Positives = 72/115 (62%), Gaps = 4/115 (3%)
Frame = +3
Query: 2031 KREGEIVSGYISSISKYATRRRSDVKDNLQHAYRTLRREFRMYFEGERSS--KILDEVEE 2204
KRE EIV+G++ SI K ++++ ++K+ L H+Y L++EFR FE S+ + D+ +
Sbjct: 1058 KREEEIVTGHVWSIPKSNSKKQGELKERLSHSYNALKKEFRQMFENLDSNLEALTDDEKN 1117
Query: 2205 SRYEAKASAWYRVAYHPIWIRNA--LQEGKHVSSGYLSHPLLLSFPWICAEYLAR 2363
E KASAWY+V YHP W++ + LQE G ++LSF WI A+YLAR
Sbjct: 1118 ILCEKKASAWYQVTYHPKWVKQSPPLQE----PDGPGDVVVMLSFAWIAADYLAR 1168
>XP_010254390.1 PREDICTED: RNA-dependent RNA polymerase 6-like [Nelumbo nucifera]
XP_010254391.1 PREDICTED: RNA-dependent RNA polymerase
6-like [Nelumbo nucifera] XP_010254392.1 PREDICTED:
RNA-dependent RNA polymerase 6-like [Nelumbo nucifera]
XP_010254393.1 PREDICTED: RNA-dependent RNA polymerase
6-like [Nelumbo nucifera]
Length = 1193
Score = 381 bits (978), Expect(2) = 0.0
Identities = 199/424 (46%), Positives = 275/424 (64%), Gaps = 9/424 (2%)
Frame = +1
Query: 13 VHYTLLDDEDPWIRTVDFTDKNAFGRCFCYRILVSTKIGHAVEDCKKYLKRDSLFDDENE 192
V + +LDDEDPWIRT DFT GRC YRI +S + G + YL++ + D+
Sbjct: 239 VPFDMLDDEDPWIRTTDFTPSRVIGRCNSYRISISPRFGPRLNKVMNYLRKHRIPDESPR 298
Query: 193 FPGLTLTVRPEGPVPRCWWCFTVPRQESIPFKTLFLLNGLLHKGILNYHSLNEEFYELC- 369
P L + P + + F + +E + F+T+F+LN ++HKGI+N H L++EF+EL
Sbjct: 299 MP-LRIRDEPNFGMLMSEFFFCIDHKEGMSFETIFMLNAVIHKGIINQHQLSDEFFELLR 357
Query: 370 --SSELGAMALRHMHIYNHQVYDAVGELKQ----VLKGHKFLNDPTLTSDTMEIYRLAIT 531
S+++ AL++++ Y V +A LK +L K + + D +E+ +L IT
Sbjct: 358 SQSTDVNVTALQNIYSYRQPVLNAYTSLKDAQRCLLDNPKLIKISKGSDDFVEMRKLVIT 417
Query: 532 PTKAYCLPPEIELSNRVLRQYRSVSDRFLRVSFMDENMEIMGSGSLTIATAPIAKEVSSS 711
PTKAYCLPPE+ELSNRVLR+Y+ V++RFLRVSF DE M+ + S +L API ++++S+
Sbjct: 418 PTKAYCLPPEVELSNRVLRKYKHVANRFLRVSFKDERMQQLSSNALNYYVAPIVRDITSN 477
Query: 712 S-PYRTAVFRKVKELLRKGFDLCGRHYSFLAFSANQL*DRSSWFFANGENVTVEEI*EWM 888
P +T VF +VK +L GF LCGR YSFLAFS+NQL DRS+WFFA +N+ V E+ +WM
Sbjct: 478 PFPQKTTVFNRVKTILSNGFFLCGRKYSFLAFSSNQLRDRSAWFFAEDKNIKVIEVKKWM 537
Query: 889 GRFYNSNVAKHAARMGQCFSSTYSTM-XXXXXXXXXXXXXXRNGYVFSDGIGKISSDLAR 1065
GRF N NVAK AARMG CFSSTY+T+ RNGYVFSDGIG ++ DL+
Sbjct: 538 GRFTNRNVAKCAARMGLCFSSTYATVEVPLKEVNLELPDIERNGYVFSDGIGMLTPDLSM 597
Query: 1066 EVSQKLQLNMNPPSAFQIRFGGYKAVVTAWAAESGHSYKLALRPSMKKFESDHQMLEIIS 1245
EV++KLQL NPP A+QIR+ G K V+ W + +L+LRPSM KFES H +LE+ S
Sbjct: 598 EVAEKLQLTANPPCAYQIRYAGCKGVIVCWPGKE-DGIRLSLRPSMNKFESRHTILEVCS 656
Query: 1246 WSRF 1257
W+RF
Sbjct: 657 WTRF 660
Score = 300 bits (767), Expect(2) = 0.0
Identities = 148/252 (58%), Positives = 185/252 (73%), Gaps = 1/252 (0%)
Frame = +2
Query: 1256 FLPGYLNRQIITLLSSLGVDDDVFFRLQNEMIYKLGEMLDKVEVAFDVLTSSCTGVLPNM 1435
F P YLNRQIITLLS+L V DDVF R+Q+ M+ KL +M++ +VAFDV+TSSC N
Sbjct: 660 FQPSYLNRQIITLLSALCVPDDVFSRMQDSMVSKLNQMIENTDVAFDVVTSSCAEQ-GNT 718
Query: 1436 AAIVLNAGFNHEREPLLKDMLAAVRAVQLDDLLRKCRIFVDKGRWLMGCFDETEELEYGQ 1615
AAI+L+AGF + EP LK ML+ +RA QL DLL K RIFV GRWLMGC DE LE GQ
Sbjct: 719 AAIMLSAGFKPQMEPHLKGMLSCIRAAQLRDLLEKSRIFVPSGRWLMGCLDELAVLEEGQ 778
Query: 1616 CFIRVSTPALKDCYRKHGSTI-QLNTASTILTGKVIVAKNPCLHPGGIRVLEAVDLPQLH 1792
CFI+VS P+L++C+ KHGS ++ + ++ G V +AKNPCLHPG IR+LEA+D+P LH
Sbjct: 779 CFIQVSKPSLENCFSKHGSRFSEVKKNTQVVKGIVAIAKNPCLHPGDIRILEAIDVPSLH 838
Query: 1793 HLVDCLVFPQKGLRPHPNEASGSDLDGDMYFVSWDSRLVPSSGQSWEPMDYNLGEAQEHA 1972
HL+DCLVFPQKG RPH NEASGSDLDGD+YFV+WD L+P S QS PMDY+ E ++
Sbjct: 839 HLIDCLVFPQKGDRPHTNEASGSDLDGDLYFVTWDEHLIPPSKQSLVPMDYSPAEVKKLP 898
Query: 1973 KDVKEEKEIGVY 2008
+DV I +
Sbjct: 899 RDVNHRDLIDFF 910
Score = 96.7 bits (239), Expect = 1e-16
Identities = 47/111 (42%), Positives = 74/111 (66%), Gaps = 1/111 (0%)
Frame = +3
Query: 2034 REGEIVSGYISSISKYATRRRSDVKDNLQHAYRTLRREFRMYFEG-ERSSKILDEVEESR 2210
RE E+V+G+I S+ KY + ++ ++K+ L++AY L++EFR FE + + ++ D+ + +
Sbjct: 1058 REEEVVTGHIWSMPKYNSNKQGELKERLKNAYNALKKEFRQAFEKIDETLQLTDDEKNTI 1117
Query: 2211 YEAKASAWYRVAYHPIWIRNALQEGKHVSSGYLSHPLLLSFPWICAEYLAR 2363
YE KASAWY+V YHP WI L+ +H S+P +LSF WI A+YL R
Sbjct: 1118 YEQKASAWYQVTYHPRWIMKTLKLREHEDE---SNPAMLSFAWIPADYLVR 1165
>XP_012857917.1 PREDICTED: RNA-dependent RNA polymerase 6 [Erythranthe guttata]
EYU20269.1 hypothetical protein MIMGU_mgv1a000386mg
[Erythranthe guttata]
Length = 1196
Score = 383 bits (984), Expect(2) = 0.0
Identities = 209/421 (49%), Positives = 271/421 (64%), Gaps = 10/421 (2%)
Frame = +1
Query: 25 LLDDEDPWIRTVDFTDKNAFGRCFCYRILVSTKIGHAVEDCKKYL-KRDSLFDDENEFPG 201
LLDD+DPWIRT DFT AFGRC YRI V G + YL KR DE
Sbjct: 244 LLDDDDPWIRTTDFTSGGAFGRCNTYRISVRPHNGPHLLKALDYLRKRRVPVLDERTRQR 303
Query: 202 LTLTVRPEGPVPRCWWCFTVPRQESIPFKTLFLLNGLLHKGILNYHSLNEEFYELCS--- 372
L + P+ +P + +E I FK +FLLN ++HKGI+N H ++E+ ++
Sbjct: 304 LVVQDEPDFGMPVLDPFLCIQYKEGISFKVMFLLNAVMHKGIINQHQISEQLLDMFRRQP 363
Query: 373 SELGAMALRHMHIYNHQVYDAVGELKQV----LKGHKFLNDPTLTSDTMEIYRLAITPTK 540
++ +AL+HM Y VYDA ++ V LK K L P D +E+ RL ITP K
Sbjct: 364 EDVNTVALKHMCSYKRPVYDAFKAVETVQRWLLKNPKLLERPRGMDDIVEVRRLIITPAK 423
Query: 541 AYCLPPEIELSNRVLRQYRSVSDRFLRVSFMDENMEIMGSGSLTIATAPIAKEVSSSS-P 717
AYCLPPE+ELSNRVLR Y++V+DRFLRV+F DE M + +LT P+ + ++SSS P
Sbjct: 424 AYCLPPEVELSNRVLRHYKAVADRFLRVTFTDEAMSTLNKNALTYYVGPMVRGITSSSNP 483
Query: 718 YRTAVFRKVKELLRKGFDLCGRHYSFLAFSANQL*DRSSWFFANGENVTVEEI*EWMGRF 897
RT +F+++K++L GF LCGR YSFLAFS+NQL DRS+WFFA +++ V I WMGRF
Sbjct: 484 QRTTIFKRIKDILHSGFYLCGRKYSFLAFSSNQLRDRSAWFFAEDKDIGVANIKNWMGRF 543
Query: 898 YNSNVAKHAARMGQCFSSTYSTM-XXXXXXXXXXXXXXRNGYVFSDGIGKISSDLAREVS 1074
N NVAK AARMGQCFSSTY+T+ RN YVFSDGIG +S+DLA EV+
Sbjct: 544 TNRNVAKCAARMGQCFSSTYATVEVPSKQVNSKLPDIERNDYVFSDGIGMLSADLAMEVA 603
Query: 1075 QKLQLNMNPPSAFQIRFGGYKAVVTAWAAESGHSYKLALRPSMKKFESDHQMLEIISWSR 1254
+KLQL N PSA+QIR+ GYK VV W A+S ++L+LR SMKKF+S+H +LEI SW+R
Sbjct: 604 EKLQLTTNLPSAYQIRYAGYKGVVACWPAQS-DGFRLSLRKSMKKFDSNHTVLEICSWTR 662
Query: 1255 F 1257
F
Sbjct: 663 F 663
Score = 297 bits (760), Expect(2) = 0.0
Identities = 144/244 (59%), Positives = 180/244 (73%), Gaps = 1/244 (0%)
Frame = +2
Query: 1256 FLPGYLNRQIITLLSSLGVDDDVFFRLQNEMIYKLGEMLDKVEVAFDVLTSSCTGVLPNM 1435
F PG+LNRQIITLLS+L V D++F+R+Q MI +L +ML+ + AFDVLTSSCT N
Sbjct: 663 FQPGFLNRQIITLLSALEVGDEIFWRMQETMISRLNQMLEDTDTAFDVLTSSCTDQ-GNT 721
Query: 1436 AAIVLNAGFNHEREPLLKDMLAAVRAVQLDDLLRKCRIFVDKGRWLMGCFDETEELEYGQ 1615
AAI+L+AGF + EP L+ ML ++R QL DL + RIFV GRWLMGC DE LE+GQ
Sbjct: 722 AAIMLSAGFKPQTEPHLRGMLTSIRVAQLGDLRERARIFVPSGRWLMGCLDELGVLEHGQ 781
Query: 1616 CFIRVSTPALKDCYRKHGSTIQ-LNTASTILTGKVIVAKNPCLHPGGIRVLEAVDLPQLH 1792
CFI+VS P+L+DC+ KHGS ++ G V +AKNPCLHPG +R+LEAVD P LH
Sbjct: 782 CFIQVSNPSLEDCFVKHGSEFSGAKKKLEVIKGLVAIAKNPCLHPGDVRILEAVDCPGLH 841
Query: 1793 HLVDCLVFPQKGLRPHPNEASGSDLDGDMYFVSWDSRLVPSSGQSWEPMDYNLGEAQEHA 1972
HL DCLVFPQKG RPH NEASGSDLDGD+YFV+WD L+P S +SW PM+Y GE ++
Sbjct: 842 HLYDCLVFPQKGERPHTNEASGSDLDGDLYFVTWDENLMPPSKRSWTPMEYAPGEVKQLP 901
Query: 1973 KDVK 1984
++VK
Sbjct: 902 REVK 905
Score = 89.4 bits (220), Expect = 2e-14
Identities = 42/111 (37%), Positives = 73/111 (65%), Gaps = 2/111 (1%)
Frame = +3
Query: 2037 EGEIVSGYISSISKYATRRRSDVKDNLQHAYRTLRREFRMYFEG--ERSSKILDEVEESR 2210
E E+V+G+I S+ KY+++++ ++K+ L+HAY TLR++FR FE ++ D+ + +
Sbjct: 1060 EEEVVTGHIWSMPKYSSKKQGELKERLKHAYSTLRKDFRKVFESMDAEFDQLSDDEKNTM 1119
Query: 2211 YEAKASAWYRVAYHPIWIRNALQEGKHVSSGYLSHPLLLSFPWICAEYLAR 2363
+E KASAWY+V Y+ W++ + + V + ++LSF WI A+YLAR
Sbjct: 1120 FERKASAWYQVTYNESWVKKS--KDLQVVDDEVGKTVMLSFAWIAADYLAR 1168
>XP_012071453.1 PREDICTED: RNA-dependent RNA polymerase 6-like [Jatropha curcas]
KDP38635.1 hypothetical protein JCGZ_03988 [Jatropha
curcas]
Length = 1198
Score = 392 bits (1006), Expect(2) = 0.0
Identities = 205/428 (47%), Positives = 283/428 (66%), Gaps = 9/428 (2%)
Frame = +1
Query: 1 VDVKVHYTLLDDEDPWIRTVDFTDKNAFGRCFCYRILVSTKIGHAVEDCKKYLKRDSLFD 180
++V V + LLDD+DPWIRT DFT A GRC YR+ + + G +E YLK +
Sbjct: 237 IEVLVPFNLLDDDDPWIRTTDFTPSGAIGRCNSYRVSIPPRHGAKLERAINYLKERRVQV 296
Query: 181 DENEFPGLTLTVRPEGPVPRCWWCFTVPRQESIPFKTLFLLNGLLHKGILNYHSLNEEFY 360
D P L + P+ +P F + R+E I F+ +FL+N ++HKGI N H L+++F+
Sbjct: 297 DSLRRP-LKILNEPDYGMPMSDPFFCIHRKEGIAFEIVFLVNAVMHKGIFNQHQLSDDFF 355
Query: 361 ELCSSE---LGAMALRHMHIYNHQVYDAVGELKQV----LKGHKFLNDPTLTSDTMEIYR 519
+L ++ + AL+H+ Y V+DA LK V LK K P D ++I R
Sbjct: 356 DLLRNQPADINVAALKHICSYKRPVFDAHRRLKAVQEWLLKNPKLFKCPKQLDDIVQIRR 415
Query: 520 LAITPTKAYCLPPEIELSNRVLRQYRSVSDRFLRVSFMDENMEIMGSGSLTIATAPIAKE 699
LAITPT+AYCLPPEIELSNRVLR+Y++ +DRFLRV+FMDE ++ + + +LT API ++
Sbjct: 416 LAITPTRAYCLPPEIELSNRVLRKYKNFADRFLRVTFMDEGLQTINANTLTYYVAPIVRD 475
Query: 700 VSSSS-PYRTAVFRKVKELLRKGFDLCGRHYSFLAFSANQL*DRSSWFFANGENVTVEEI 876
++S+S +T +F++VK +L GF LCGR YSFLAFS+NQL DRS+WFFA + V++I
Sbjct: 476 ITSTSFSQKTRIFKRVKSILTDGFYLCGRRYSFLAFSSNQLRDRSAWFFAEDGKIRVDQI 535
Query: 877 *EWMGRFYNSNVAKHAARMGQCFSSTYSTM-XXXXXXXXXXXXXXRNGYVFSDGIGKISS 1053
+WMG+F N N+AK AARMGQCFSSTY+T+ RNGY FSDGIG I+
Sbjct: 536 RKWMGKFTNKNIAKCAARMGQCFSSTYATVEVPSAEVNLAHPDIERNGYTFSDGIGMITP 595
Query: 1054 DLAREVSQKLQLNMNPPSAFQIRFGGYKAVVTAWAAESGHSYKLALRPSMKKFESDHQML 1233
DLA+ V++KL+L++NPP A+QIR+ G K VV W A+ G +L+LRPSM KF+S+H L
Sbjct: 596 DLAKAVAEKLKLDINPPCAYQIRYAGCKGVVACWPAQ-GDGIRLSLRPSMNKFQSNHTTL 654
Query: 1234 EIISWSRF 1257
EI SW+RF
Sbjct: 655 EICSWTRF 662
Score = 288 bits (737), Expect(2) = 0.0
Identities = 141/252 (55%), Positives = 179/252 (71%), Gaps = 1/252 (0%)
Frame = +2
Query: 1256 FLPGYLNRQIITLLSSLGVDDDVFFRLQNEMIYKLGEMLDKVEVAFDVLTSSCTGVLPNM 1435
F PG+LNRQIITLLS+L V D++F+++Q M+ KL +ML +VAFDV+T+SCT N
Sbjct: 662 FQPGFLNRQIITLLSTLNVSDEIFWKMQIAMVSKLNKMLTDADVAFDVITASCTEQ-GNT 720
Query: 1436 AAIVLNAGFNHEREPLLKDMLAAVRAVQLDDLLRKCRIFVDKGRWLMGCFDETEELEYGQ 1615
AA++L+AGF + EP L+ ML +RA Q DL K RIFV GRWLMGC DE LE GQ
Sbjct: 721 AALMLSAGFKPQNEPHLRGMLTCIRAAQFCDLREKARIFVSSGRWLMGCLDELGVLEQGQ 780
Query: 1616 CFIRVSTPALKDCYRKHGSTIQLNTAST-ILTGKVIVAKNPCLHPGGIRVLEAVDLPQLH 1792
CFI+VS P+L+ C+ KHGS + ++TG V++AKNPCLHPG +R+LEAVD P L
Sbjct: 781 CFIQVSNPSLETCFSKHGSRFSETKKNLQVITGTVVIAKNPCLHPGDVRILEAVDAPGLC 840
Query: 1793 HLVDCLVFPQKGLRPHPNEASGSDLDGDMYFVSWDSRLVPSSGQSWEPMDYNLGEAQEHA 1972
HL DCLVFPQKG RPH NEASGSDLDGD+YFV+WD L+P S QSW PM Y+ E + +
Sbjct: 841 HLHDCLVFPQKGDRPHTNEASGSDLDGDLYFVTWDENLIPPSKQSWTPMQYDAAEPKLLS 900
Query: 1973 KDVKEEKEIGVY 2008
+ V + I +
Sbjct: 901 RPVSHQDIIDFF 912
Score = 94.0 bits (232), Expect = 8e-16
Identities = 48/123 (39%), Positives = 78/123 (63%), Gaps = 2/123 (1%)
Frame = +3
Query: 2031 KREGEIVSGYISSISKYATRRRSDVKDNLQHAYRTLRREFRMYFE--GERSSKILDEVEE 2204
K+E E+V+G+I S+ Y +R+ ++K+ L+H+Y L++EFR FE ++ D+ +
Sbjct: 1061 KKEEELVTGHIWSMPMYNSRKLGELKERLKHSYSALKKEFRQVFEKMDLDFEQLTDDEKN 1120
Query: 2205 SRYEAKASAWYRVAYHPIWIRNALQEGKHVSSGYLSHPLLLSFPWICAEYLARNQELRSG 2384
YE KASAWY+V YHP WI+ +L+ + ++G + +LSF WI A+YLAR + G
Sbjct: 1121 LLYERKASAWYQVTYHPKWIKKSLELQEPDAAG---NATILSFAWIAADYLARIKIKHRG 1177
Query: 2385 SSG 2393
+ G
Sbjct: 1178 TEG 1180
>XP_007225440.1 hypothetical protein PRUPE_ppa000422mg [Prunus persica] ONI34398.1
hypothetical protein PRUPE_1G480300 [Prunus persica]
ONI34399.1 hypothetical protein PRUPE_1G480300 [Prunus
persica]
Length = 1196
Score = 389 bits (999), Expect(2) = 0.0
Identities = 206/427 (48%), Positives = 277/427 (64%), Gaps = 8/427 (1%)
Frame = +1
Query: 1 VDVKVHYTLLDDEDPWIRTVDFTDKNAFGRCFCYRILVSTKIGHAVEDCKKYLKRDSLFD 180
+D V + LLDD+DPWIRT DFT A GRC YR+L+ + G ++ YL+ + +
Sbjct: 236 IDQSVPFDLLDDDDPWIRTTDFTPSGAIGRCNSYRVLIPPRHGAKLKKAMNYLRERRVKE 295
Query: 181 DENEFPGLTLTVRPEGPVPRCWWCFTVPRQESIPFKTLFLLNGLLHKGILNYHSLNEEFY 360
++P + P+ + F++ +E I F+ +FL+N ++HKG +N H L++ F+
Sbjct: 296 VCIKWPP-KIQDEPDFGMSNTEPFFSIQYEEGISFEIMFLVNAVMHKGTVNQHQLSDSFF 354
Query: 361 ELCSS---ELGAMALRHMHIYNHQVYDAVGELKQV----LKGHKFLNDPTLTSDTMEIYR 519
L S E+ AL+H+ Y V+DA LK V LK K + DP D E+ R
Sbjct: 355 HLLRSQPKEINVAALKHLCSYRSPVFDACERLKVVQDWLLKNPKLVKDPKRLDDIAEVRR 414
Query: 520 LAITPTKAYCLPPEIELSNRVLRQYRSVSDRFLRVSFMDENMEIMGSGSLTIATAPIAKE 699
L ITPTKAYCLPPE+ELSNRVLR+Y+ V+DRFLRV+FMDE M+ + S L API KE
Sbjct: 415 LVITPTKAYCLPPEVELSNRVLRKYKEVADRFLRVTFMDEGMQKINSNVLNYYVAPIVKE 474
Query: 700 VSSSS-PYRTAVFRKVKELLRKGFDLCGRHYSFLAFSANQL*DRSSWFFANGENVTVEEI 876
++S+S +T VF++ + +L GF LCGR Y+FLAFS+NQL DRS+WFFA N++V +I
Sbjct: 475 ITSNSFLQKTNVFKRFRTILNDGFYLCGRKYTFLAFSSNQLRDRSAWFFAECVNISVGKI 534
Query: 877 *EWMGRFYNSNVAKHAARMGQCFSSTYSTMXXXXXXXXXXXXXXRNGYVFSDGIGKISSD 1056
WMG+F N NVAK AARMGQCFSSTY+T+ RNGYVFSDGIG I+ D
Sbjct: 535 TSWMGKFNNKNVAKCAARMGQCFSSTYATVEVTSSEVNDIPDIKRNGYVFSDGIGMITPD 594
Query: 1057 LAREVSQKLQLNMNPPSAFQIRFGGYKAVVTAWAAESGHSYKLALRPSMKKFESDHQMLE 1236
LA EV++KL+L+ NPP A+QIRF G K VV W ++ G ++L+LR SM KFES H LE
Sbjct: 595 LALEVAEKLKLDRNPPCAYQIRFAGCKGVVACWPSK-GDGFRLSLRTSMNKFESKHTTLE 653
Query: 1237 IISWSRF 1257
I SW+R+
Sbjct: 654 ICSWTRY 660
Score = 288 bits (738), Expect(2) = 0.0
Identities = 141/252 (55%), Positives = 182/252 (72%), Gaps = 1/252 (0%)
Frame = +2
Query: 1256 FLPGYLNRQIITLLSSLGVDDDVFFRLQNEMIYKLGEMLDKVEVAFDVLTSSCTGVLPNM 1435
+ PG+LNRQIITLLS+L V+D++F+R+Q +M+ KL +ML +VAFDVLT+SC N
Sbjct: 660 YQPGFLNRQIITLLSTLNVEDEIFWRMQEKMVLKLNQMLVDTDVAFDVLTASCAEQ-GNA 718
Query: 1436 AAIVLNAGFNHEREPLLKDMLAAVRAVQLDDLLRKCRIFVDKGRWLMGCFDETEELEYGQ 1615
AAI+L+AGF + EP L+ ML ++A QL L K RIFV GRWLMG DE LE GQ
Sbjct: 719 AAIMLSAGFKPQTEPHLRGMLTCIQAAQLWGLREKARIFVHSGRWLMGVLDELGVLEQGQ 778
Query: 1616 CFIRVSTPALKDCYRKHGSTI-QLNTASTILTGKVIVAKNPCLHPGGIRVLEAVDLPQLH 1792
CF++VSTP L+ C+ KHGS+ Q+ ++ G V++AKNPCLHPG IR+LEAVD P LH
Sbjct: 779 CFVQVSTPLLESCFAKHGSSFAQIERNLQVIKGHVVIAKNPCLHPGDIRILEAVDAPGLH 838
Query: 1793 HLVDCLVFPQKGLRPHPNEASGSDLDGDMYFVSWDSRLVPSSGQSWEPMDYNLGEAQEHA 1972
HL DCLVFPQKG RPH +EASGSDLDGD+YFV+WD L+P S +SW PM Y+ EA+
Sbjct: 839 HLYDCLVFPQKGDRPHTDEASGSDLDGDLYFVTWDENLIPPSKKSWMPMQYDPAEAKLQG 898
Query: 1973 KDVKEEKEIGVY 2008
+ V ++ I +
Sbjct: 899 RPVTQQDIIDFF 910
Score = 88.2 bits (217), Expect = 5e-14
Identities = 48/115 (41%), Positives = 72/115 (62%), Gaps = 4/115 (3%)
Frame = +3
Query: 2031 KREGEIVSGYISSISKYATRRRSDVKDNLQHAYRTLRREFRMYFEGERSS--KILDEVEE 2204
KRE EIV+G++ SI K ++++ ++K+ L H+Y L++EFR FE S+ + D+ +
Sbjct: 1058 KREEEIVTGHVWSIPKSNSKKQGELKERLSHSYNALKKEFRQMFENLDSNLEALTDDEKN 1117
Query: 2205 SRYEAKASAWYRVAYHPIWIRNA--LQEGKHVSSGYLSHPLLLSFPWICAEYLAR 2363
E KASAWY+V YHP W++ + LQE G ++LSF WI A+YLAR
Sbjct: 1118 LLCEKKASAWYQVTYHPKWVKQSPPLQE----PDGPGDVVVMLSFAWIAADYLAR 1168
>XP_010101266.1 RNA-dependent RNA polymerase 6 [Morus notabilis] EXB88201.1
RNA-dependent RNA polymerase 6 [Morus notabilis]
Length = 1194
Score = 389 bits (999), Expect(2) = 0.0
Identities = 210/428 (49%), Positives = 277/428 (64%), Gaps = 9/428 (2%)
Frame = +1
Query: 1 VDVKVHYTLLDDEDPWIRTVDFTDKNAFGRCFCYRILVSTKIGHAVEDCKKYLKRDSLFD 180
++V V + LLDD+DPWIRT DFT A GRC YR+ + + G ++ YL R+
Sbjct: 233 IEVSVPFDLLDDDDPWIRTTDFTPSGAIGRCNSYRVSIPPRHGSKLKKAMSYL-RERRVQ 291
Query: 181 DENEFPGLTLTVRPEGPVPRCWWCFTVPRQESIPFKTLFLLNGLLHKGILNYHSLNEEFY 360
+ L + P+ VP F V + IPF+ +FLLN ++HKGI N H++++ +
Sbjct: 292 ETPLRKALRIQSEPDFAVPMSDPIFYVHGKHGIPFEIMFLLNVIVHKGIFNQHNISDGLF 351
Query: 361 ELCSS---ELGAMALRHMHIYNHQVYDAVGELKQV----LKGHKFLNDPTLTSDTMEIYR 519
+L + E+ AL+H+ Y V+DA +LK V L+ K L P D E+ R
Sbjct: 352 DLFRNQPREINLAALKHISSYKRPVFDAYAKLKNVQEWLLRNPKLLKIPRQLDDIAEVRR 411
Query: 520 LAITPTKAYCLPPEIELSNRVLRQYRSVSDRFLRVSFMDENMEIMGSGSLTIATAPIAKE 699
L ITPT+AYCLPPE+ELSNRVLR+Y+ VSDRFLRV+FMDE M+ M LT API KE
Sbjct: 412 LVITPTRAYCLPPEVELSNRVLRKYKEVSDRFLRVTFMDEGMQTMNLNVLTYYPAPIVKE 471
Query: 700 VSSSSP-YRTAVFRKVKELLRKGFDLCGRHYSFLAFSANQL*DRSSWFFANGENVTVEEI 876
++S+S +T VF++VK LL GF LCG+ YSFLAFS+NQL DRS+WFFA +TV I
Sbjct: 472 LTSNSTSQKTKVFKRVKSLLTDGFYLCGQRYSFLAFSSNQLRDRSAWFFAEDGKITVNGI 531
Query: 877 *EWMGRFYNSNVAKHAARMGQCFSSTYSTM-XXXXXXXXXXXXXXRNGYVFSDGIGKISS 1053
+WMGRF N N+AK AARMGQCFSSTY+T+ RN YVFSDGIG I+
Sbjct: 532 KKWMGRFNNRNIAKCAARMGQCFSSTYATVEVPLTEVNFDLEEIERNTYVFSDGIGMITP 591
Query: 1054 DLAREVSQKLQLNMNPPSAFQIRFGGYKAVVTAWAAESGHSYKLALRPSMKKFESDHQML 1233
DLA+EV++KL+L++NPPSA+QIR+ G K VV W + G +L+LR SM KF+S H +L
Sbjct: 592 DLAKEVAEKLKLDINPPSAYQIRYAGCKGVVACWPPK-GDGIRLSLRRSMNKFDSKHTIL 650
Query: 1234 EIISWSRF 1257
EI SW+RF
Sbjct: 651 EICSWTRF 658
Score = 288 bits (738), Expect(2) = 0.0
Identities = 140/252 (55%), Positives = 183/252 (72%), Gaps = 1/252 (0%)
Frame = +2
Query: 1256 FLPGYLNRQIITLLSSLGVDDDVFFRLQNEMIYKLGEMLDKVEVAFDVLTSSCTGVLPNM 1435
F PG+LNRQI+TLLS+L V D++F+++Q M++KL +ML +VAF+VLT+SC N+
Sbjct: 658 FQPGFLNRQIVTLLSTLNVRDEIFWKMQETMLFKLNQMLTDADVAFNVLTASCPEQ-GNV 716
Query: 1436 AAIVLNAGFNHEREPLLKDMLAAVRAVQLDDLLRKCRIFVDKGRWLMGCFDETEELEYGQ 1615
AI+L+AGF + EP L+ ML +RA QL L K RIFV GRWLMGC DE LE GQ
Sbjct: 717 GAIMLSAGFKPQSEPHLQGMLTCIRAAQLWGLREKARIFVPLGRWLMGCLDELGVLEQGQ 776
Query: 1616 CFIRVSTPALKDCYRKHGSTI-QLNTASTILTGKVIVAKNPCLHPGGIRVLEAVDLPQLH 1792
CFI+VSTP+L++C+ KHGS + ++ G V++AKNPCLHPG IR+LEAVD+P LH
Sbjct: 777 CFIQVSTPSLENCFSKHGSRFSETKNNLEVIKGFVVIAKNPCLHPGDIRILEAVDVPGLH 836
Query: 1793 HLVDCLVFPQKGLRPHPNEASGSDLDGDMYFVSWDSRLVPSSGQSWEPMDYNLGEAQEHA 1972
HL DCLVFPQKG RPH NEASGSDLDGD+YFV+WD L+P S +SW PM Y+ + +
Sbjct: 837 HLYDCLVFPQKGDRPHANEASGSDLDGDLYFVTWDENLIPPSKKSWNPMQYDPAKPRTLP 896
Query: 1973 KDVKEEKEIGVY 2008
+DV ++ I +
Sbjct: 897 RDVTQKDIIDFF 908
Score = 94.7 bits (234), Expect = 4e-16
Identities = 46/113 (40%), Positives = 73/113 (64%), Gaps = 2/113 (1%)
Frame = +3
Query: 2031 KREGEIVSGYISSISKYATRRRSDVKDNLQHAYRTLRREFRMYFEGERS--SKILDEVEE 2204
KRE E+V+G I S+ K+ +R+ D+K+ L+H+Y LR+EFR FE S ++ D+ +
Sbjct: 1056 KREEEVVTGQIWSMPKHNSRKEGDLKERLKHSYTGLRKEFRQVFEKVDSDFEQLTDDEKN 1115
Query: 2205 SRYEAKASAWYRVAYHPIWIRNALQEGKHVSSGYLSHPLLLSFPWICAEYLAR 2363
YE +ASAWY++ YHP W++ + + H + + ++LSF WI A+YLAR
Sbjct: 1116 VLYEKRASAWYQITYHPKWVKKS--QDMHDQLEEVKNVVMLSFAWIAADYLAR 1166
>XP_020108971.1 probable RNA-dependent RNA polymerase SHL2 [Ananas comosus]
Length = 1232
Score = 382 bits (980), Expect(2) = 0.0
Identities = 210/427 (49%), Positives = 271/427 (63%), Gaps = 12/427 (2%)
Frame = +1
Query: 13 VHYTLLDDEDPWIRTVDFTDKNAFGRCFCYRILVSTKIGHAVEDCKKYLKRDSLFDDENE 192
V + LLDDEDPWIRT DF+ A GRC Y+I +S + G +E YL++ + D
Sbjct: 273 VPFNLLDDEDPWIRTTDFSPTGAVGRCSSYKISLSPRFGGKLERALDYLRKRRIPDYR-- 330
Query: 193 FPGLTLTVRPE---GPVPRCWWCFTVPRQESIPFKTLFLLNGLLHKGILNYHSLNEEFYE 363
P L VRPE G P F++ E + F LFL+N L+HKGI+N H L+++F+
Sbjct: 331 -PNRQLVVRPEPDFGFSPATDHFFSIHHAEGVGFPILFLVNALVHKGIVNQHQLSDQFFG 389
Query: 364 LCSSELGAM---ALRHMHIYNHQVYDAVGELKQV----LKGHKFLNDPTLTSDTMEIYRL 522
L + G + ALRH+ Y ++DA LK V L K L L E+ RL
Sbjct: 390 LLRGQNGVVNETALRHIWSYKRPIFDAYRRLKLVQEWLLNNPKLLRSSKLADYYAEVRRL 449
Query: 523 AITPTKAYCLPPEIELSNRVLRQYRSVSDRFLRVSFMDENMEIMGSGSLTIATAPIAKEV 702
ITPTKAYC+PP IELSNRVLR+Y+ V+DRFLRV+F DE M+ + + L API KE+
Sbjct: 450 VITPTKAYCIPPAIELSNRVLRRYKEVADRFLRVTFTDEGMQQLNNSVLNYYVAPIVKEI 509
Query: 703 SSSS-PYRTAVFRKVKELLRKGFDLCGRHYSFLAFSANQL*DRSSWFFANGENVTVEEI* 879
+S+S +T VF++VK +L GF LCGR YSFLAFS+NQL DRS+WFFA TV I
Sbjct: 510 TSNSYQQKTTVFKRVKSILEDGFYLCGRKYSFLAFSSNQLRDRSAWFFAEDSKTTVAAIT 569
Query: 880 EWMGRFYNSNVAKHAARMGQCFSSTYSTMXXXXXXXXXXXXXXR-NGYVFSDGIGKISSD 1056
+WMGRF + NVAK AAR+GQCFSSTY+T+ N Y+FSDGIGKI+ D
Sbjct: 570 KWMGRFSDRNVAKCAARIGQCFSSTYATVEVPLREVNPVLPDIEGNRYIFSDGIGKITPD 629
Query: 1057 LAREVSQKLQLNMNPPSAFQIRFGGYKAVVTAWAAESGHSYKLALRPSMKKFESDHQMLE 1236
LA EV++KL+L NPPSA+QIR+ G K VV W + +L+LRPSM KFES+H +LE
Sbjct: 630 LAMEVAEKLKLTDNPPSAYQIRYAGCKGVVAVWPGDE-IGIRLSLRPSMNKFESNHTVLE 688
Query: 1237 IISWSRF 1257
++SWSRF
Sbjct: 689 VVSWSRF 695
Score = 295 bits (756), Expect(2) = 0.0
Identities = 147/252 (58%), Positives = 184/252 (73%), Gaps = 1/252 (0%)
Frame = +2
Query: 1256 FLPGYLNRQIITLLSSLGVDDDVFFRLQNEMIYKLGEMLDKVEVAFDVLTSSCTGVLPNM 1435
F PG+LNRQIITLLSSL V D VF R+Q+ MI KL EML +VAF+VLT+SC N
Sbjct: 695 FQPGFLNRQIITLLSSLSVPDSVFARMQDSMICKLNEMLVDTDVAFEVLTTSCAEQ-GNT 753
Query: 1436 AAIVLNAGFNHEREPLLKDMLAAVRAVQLDDLLRKCRIFVDKGRWLMGCFDETEELEYGQ 1615
AA++L+AGF + EP LK ML+ +R+ QL DLL K RIFV KGRWLMGC DE LE+GQ
Sbjct: 754 AAMMLSAGFKPQTEPHLKAMLSCIRSAQLGDLLDKTRIFVPKGRWLMGCLDELAVLEHGQ 813
Query: 1616 CFIRVSTPALKDCYRKHGSTIQLNTAST-ILTGKVIVAKNPCLHPGGIRVLEAVDLPQLH 1792
CFI+ S+P+L++C+ KHG+ + I+ G V++AKNPCLHPG +R+LEAVD+P LH
Sbjct: 814 CFIQTSSPSLQNCFIKHGTRFSSTKMNRQIIVGVVVIAKNPCLHPGDVRILEAVDVPDLH 873
Query: 1793 HLVDCLVFPQKGLRPHPNEASGSDLDGDMYFVSWDSRLVPSSGQSWEPMDYNLGEAQEHA 1972
LVDCLVFPQKG RPH NEASGSDLDGD+YFV+WD L+P +SW PMDY EA++
Sbjct: 874 QLVDCLVFPQKGDRPHANEASGSDLDGDLYFVTWDDDLIPPGKRSWVPMDYAAAEAKKLP 933
Query: 1973 KDVKEEKEIGVY 2008
+ V + I +
Sbjct: 934 RTVSPQDIIDFF 945
Score = 91.7 bits (226), Expect = 4e-15
Identities = 49/115 (42%), Positives = 72/115 (62%), Gaps = 6/115 (5%)
Frame = +3
Query: 2037 EGEIVSGYISSISKYATRRRSDVKDNLQHAYRTLRREFRMYFE--GERSSKILDEVEESR 2210
EGE+V+G+I S+ K +R++ ++K+ L++AY LR+EFR FE G ++ D+ +
Sbjct: 1097 EGEVVTGHIWSMPKNNSRKQGELKERLKNAYAALRKEFRNVFETAGPHFDELSDDEKSVW 1156
Query: 2211 YEAKASAWYRVAYHPIWIRNALQ----EGKHVSSGYLSHPLLLSFPWICAEYLAR 2363
YE KASAWY+V YHP W+R + + EG+ V P LSF WI A+YL R
Sbjct: 1157 YEQKASAWYQVTYHPKWLRKSCEMQEPEGEMV-------PARLSFAWIAADYLVR 1204
>JAT66018.1 RNA-dependent RNA polymerase 6 [Anthurium amnicola]
Length = 1199
Score = 372 bits (954), Expect(2) = 0.0
Identities = 207/430 (48%), Positives = 276/430 (64%), Gaps = 13/430 (3%)
Frame = +1
Query: 7 VKVHYTLLDDEDPWIRTVDFTDKNAFGRCFCYRILVSTKIGHAVEDCKKYLKRDSLFDDE 186
V V + LLDD+DPWIRT DFT A GRC YRI S + G + Y++ + + +
Sbjct: 241 VSVPFNLLDDDDPWIRTTDFTPSGAIGRCSSYRISFSPRYGVKLRKAMGYMREHRIREYD 300
Query: 187 NEFPGLTLTVRPE----GPVPRCWWCFTVPRQESIPFKTLFLLNGLLHKGILNYHSLNEE 354
P + VR E PV ++C + +E I F +FL+N L+HKGI + H L+E+
Sbjct: 301 ---PKREIFVRKEPSYGSPVSDVFFC--IQYEEGISFNIMFLVNVLVHKGIFSQHQLSED 355
Query: 355 FYELC---SSELGAMALRHMHIYNHQVYDAVGELKQV---LKGHKFLNDPTLTSD-TMEI 513
F+ L S + ++LRH+ Y ++DA LK V L G+ L T TS+ E+
Sbjct: 356 FFSLLRRQSDMVNEVSLRHICSYKRPIFDATRRLKVVQEWLLGNPKLQKRTQTSEHNAEV 415
Query: 514 YRLAITPTKAYCLPPEIELSNRVLRQYRSVSDRFLRVSFMDENMEIMGSGSLTIATAPIA 693
RL ITPT+AYCLPPEIELSNRVLR Y+ V+DRFLRV+FMDE ME + + LT TAPI
Sbjct: 416 RRLIITPTRAYCLPPEIELSNRVLRNYKEVADRFLRVTFMDEGMEQLNNNVLTYYTAPIV 475
Query: 694 KEVSSSS-PYRTAVFRKVKELLRKGFDLCGRHYSFLAFSANQL*DRSSWFFANGENVTVE 870
++++ +S P +T VF++VK +L GF LCGR+YSFLAFS+NQL DRS+WFFA + V
Sbjct: 476 RDITKNSYPQKTTVFKRVKSILTNGFHLCGRNYSFLAFSSNQLRDRSAWFFAEDRDHKVN 535
Query: 871 EI*EWMGRFYNSNVAKHAARMGQCFSSTYSTM-XXXXXXXXXXXXXXRNGYVFSDGIGKI 1047
I WMG+F + NVAK AARMGQCFSSTY+T+ RN +VFSDGIGK+
Sbjct: 536 SIRTWMGKFSDRNVAKCAARMGQCFSSTYATVNVPLGNVDPEFPDIERNEFVFSDGIGKV 595
Query: 1048 SSDLAREVSQKLQLNMNPPSAFQIRFGGYKAVVTAWAAESGHSYKLALRPSMKKFESDHQ 1227
+ +LA +V++KLQL NPPSA+QIR+ G K V+ W +G +L LR SM KFES H
Sbjct: 596 TPELAMKVAEKLQLADNPPSAYQIRYAGCKGVLAVWPG-NGDGIQLFLRRSMNKFESLHT 654
Query: 1228 MLEIISWSRF 1257
+LE++SW+RF
Sbjct: 655 VLEVVSWTRF 664
Score = 305 bits (782), Expect(2) = 0.0
Identities = 151/252 (59%), Positives = 188/252 (74%), Gaps = 1/252 (0%)
Frame = +2
Query: 1256 FLPGYLNRQIITLLSSLGVDDDVFFRLQNEMIYKLGEMLDKVEVAFDVLTSSCTGVLPNM 1435
F PG+LNRQIITLLSSLGV D VF ++Q+ MI KL +ML +VA+DVLT+SC N+
Sbjct: 664 FQPGFLNRQIITLLSSLGVPDCVFDKMQDLMICKLNQMLMDTDVAYDVLTTSCAEQ-GNI 722
Query: 1436 AAIVLNAGFNHEREPLLKDMLAAVRAVQLDDLLRKCRIFVDKGRWLMGCFDETEELEYGQ 1615
AA++L+AGF + EP LK ML+ +R+ QL DLLRK RIFV KGRWLMGCFDE LEYGQ
Sbjct: 723 AAMMLSAGFRPQTEPHLKAMLSCIRSAQLGDLLRKARIFVPKGRWLMGCFDELGVLEYGQ 782
Query: 1616 CFIRVSTPALKDCYRKHGSTIQ-LNTASTILTGKVIVAKNPCLHPGGIRVLEAVDLPQLH 1792
CFI+VSTP+L++C+ KHGS+ ++TG V + KNPCLHPG IR+LEAVD+P LH
Sbjct: 783 CFIQVSTPSLENCFSKHGSSFSGTKKVRHVITGTVAITKNPCLHPGDIRILEAVDVPGLH 842
Query: 1793 HLVDCLVFPQKGLRPHPNEASGSDLDGDMYFVSWDSRLVPSSGQSWEPMDYNLGEAQEHA 1972
HLVDCL+FPQKG RPH NEASGSDLDGD+YFV+WD L+P SWEPM+Y E ++
Sbjct: 843 HLVDCLIFPQKGDRPHTNEASGSDLDGDLYFVAWDENLIPPGKTSWEPMNYVAPEVKKLP 902
Query: 1973 KDVKEEKEIGVY 2008
+ V + I +
Sbjct: 903 RPVTDRDIIDFF 914
Score = 91.3 bits (225), Expect = 5e-15
Identities = 49/132 (37%), Positives = 76/132 (57%), Gaps = 6/132 (4%)
Frame = +3
Query: 2037 EGEIVSGYISSISKYATRRRSDVKDNLQHAYRTLRREFRMYFE--GERSSKILDEVEESR 2210
EGE+V+G+I + Y +R++ D+K+ L++AY L +EFR FE G +++D+ +
Sbjct: 1063 EGEVVTGHIWPLPGYNSRKQGDMKERLKNAYFALHKEFRQIFEDMGSEFVQLVDDEKGRL 1122
Query: 2211 YEAKASAWYRVAYHPIWIRNALQ----EGKHVSSGYLSHPLLLSFPWICAEYLARNQELR 2378
YE KASAWY+V YHP W+R AL +G + P LSF W+ A+YL R +
Sbjct: 1123 YEQKASAWYQVTYHPQWVRKALDLREPDGDDI-------PARLSFAWVPADYLIRIKVRS 1175
Query: 2379 SGSSGQMQMPEP 2414
G++ +P
Sbjct: 1176 RRDKGELDGNKP 1187
>XP_011026450.1 PREDICTED: RNA-dependent RNA polymerase 6-like [Populus euphratica]
Length = 1200
Score = 392 bits (1007), Expect(2) = 0.0
Identities = 207/430 (48%), Positives = 280/430 (65%), Gaps = 11/430 (2%)
Frame = +1
Query: 1 VDVKVHYTLLDDEDPWIRTVDFTDKNAFGRCFCYRILVSTKIGHAVEDCKKYLK--RDSL 174
++ V + LLDD+DPWIRT DFT A GRC YR+ + + G + KYLK R +
Sbjct: 237 IEAWVPFDLLDDDDPWIRTTDFTGSGAIGRCHSYRVSIPPRHGSKLRKAVKYLKERRVEV 296
Query: 175 FDDENEFPGLTLTVRPEGPVPRCWWCFTVPRQESIPFKTLFLLNGLLHKGILNYHSLNEE 354
+EN + + P+ +P F + +E I F LFL+N ++HKGI N H L+ +
Sbjct: 297 LQEENHRRRIRILDEPDFGMPMSDPFFCIHHKEGIAFDVLFLVNAVMHKGIFNQHQLSND 356
Query: 355 FYELCSS---ELGAMALRHMHIYNHQVYDAVGELKQV----LKGHKFLNDPTLTSDTMEI 513
F++L + E+ AL+H+ Y V++A LK V LK +P D +EI
Sbjct: 357 FFDLLRNQHTEVNVSALKHICTYRRPVFNAYKRLKAVQEWLLKNPNLFKNPKQLGDIVEI 416
Query: 514 YRLAITPTKAYCLPPEIELSNRVLRQYRSVSDRFLRVSFMDENMEIMGSGSLTIATAPIA 693
RL ITPTKAYCLPPE+ELSNRVLR+Y+ V+DRFLRV+FMDE ++ M S L API
Sbjct: 417 RRLVITPTKAYCLPPEVELSNRVLRKYKDVADRFLRVTFMDEGLQRMNSNVLNYYVAPIV 476
Query: 694 KEVSSSSPY-RTAVFRKVKELLRKGFDLCGRHYSFLAFSANQL*DRSSWFFANGENVTVE 870
++++S+S + +T +F++V+ +L +GF LCGR YSFLAFSANQL D+S+WFFA NV+V
Sbjct: 477 RDITSNSFHQKTRIFKRVRSILTEGFYLCGRRYSFLAFSANQLRDQSAWFFAEERNVSVL 536
Query: 871 EI*EWMGRFYNSNVAKHAARMGQCFSSTYSTM-XXXXXXXXXXXXXXRNGYVFSDGIGKI 1047
+I WMG+F N N+AK AARMGQCFSSTY+T+ RNGYVFSDGIG I
Sbjct: 537 DIKSWMGKFTNRNIAKCAARMGQCFSSTYATIEVPPEEVNFDLPDIERNGYVFSDGIGII 596
Query: 1048 SSDLAREVSQKLQLNMNPPSAFQIRFGGYKAVVTAWAAESGHSYKLALRPSMKKFESDHQ 1227
+ DLAREV++KL+L+++PP A+QIR+ G K VV W + G L+LRPSM KF+S+H
Sbjct: 597 TPDLAREVAEKLKLDIDPPCAYQIRYAGCKGVVACWPGK-GDGVHLSLRPSMNKFQSNHT 655
Query: 1228 MLEIISWSRF 1257
LEI SW+RF
Sbjct: 656 TLEICSWTRF 665
Score = 285 bits (728), Expect(2) = 0.0
Identities = 142/246 (57%), Positives = 177/246 (71%), Gaps = 1/246 (0%)
Frame = +2
Query: 1256 FLPGYLNRQIITLLSSLGVDDDVFFRLQNEMIYKLGEMLDKVEVAFDVLTSSCTGVLPNM 1435
F PG+LNRQIITLLS+L V D VF+++Q M+ KL +M +VAFDVLT+SC N+
Sbjct: 665 FQPGFLNRQIITLLSTLNVPDAVFWKMQETMVSKLNQMFVNSDVAFDVLTASCADQ-GNV 723
Query: 1436 AAIVLNAGFNHEREPLLKDMLAAVRAVQLDDLLRKCRIFVDKGRWLMGCFDETEELEYGQ 1615
AAI+L+AGF ++EP L+ ML VRA QL L K RIFV GRWLMGC DE LE GQ
Sbjct: 724 AAIMLSAGFKPQKEPHLRGMLTCVRAAQLWGLREKARIFVPSGRWLMGCLDELGMLEQGQ 783
Query: 1616 CFIRVSTPALKDCYRKHGSTI-QLNTASTILTGKVIVAKNPCLHPGGIRVLEAVDLPQLH 1792
CFI+VS +L+ C+ KHG+ + ++ G V++AKNPCLHPG +RVLEAVD+P LH
Sbjct: 784 CFIQVSNSSLEKCFIKHGAKFSEAKKNLQVVKGTVVIAKNPCLHPGDVRVLEAVDVPGLH 843
Query: 1793 HLVDCLVFPQKGLRPHPNEASGSDLDGDMYFVSWDSRLVPSSGQSWEPMDYNLGEAQEHA 1972
HL DCLVFPQKG RPH NEASGSDLDGD+YFV+WD L+P S +SW PM Y+ EA+ A
Sbjct: 844 HLYDCLVFPQKGERPHTNEASGSDLDGDLYFVTWDENLIPPSKRSWIPMQYDAAEAKLLA 903
Query: 1973 KDVKEE 1990
+ V +
Sbjct: 904 RPVNHQ 909
Score = 100 bits (250), Expect = 6e-18
Identities = 53/130 (40%), Positives = 89/130 (68%), Gaps = 2/130 (1%)
Frame = +3
Query: 2031 KREGEIVSGYISSISKYATRRRSDVKDNLQHAYRTLRREFRMYFEG-ERSSKILDEVEES 2207
KRE E+V+G+I S+ KY++R++ ++KD L+H+Y +L++EFR FE + + L++ E++
Sbjct: 1063 KREEELVTGHIWSMPKYSSRKQGELKDRLKHSYNSLKKEFRQIFEKMDLEFEQLEDGEKN 1122
Query: 2208 R-YEAKASAWYRVAYHPIWIRNALQEGKHVSSGYLSHPLLLSFPWICAEYLARNQELRSG 2384
+ YE KASAWY+VAYHP W++ +L+ +G ++LSF WI A+YLAR ++R
Sbjct: 1123 KLYEQKASAWYQVAYHPHWVKKSLELQDPDGAG---TSVMLSFGWIAADYLAR-IKIRHR 1178
Query: 2385 SSGQMQMPEP 2414
+G + +P
Sbjct: 1179 ETGNVDSAKP 1188
>XP_012076580.1 PREDICTED: RNA-dependent RNA polymerase 6-like [Jatropha curcas]
KDP33599.1 hypothetical protein JCGZ_07170 [Jatropha
curcas]
Length = 1199
Score = 392 bits (1006), Expect(2) = 0.0
Identities = 203/428 (47%), Positives = 285/428 (66%), Gaps = 9/428 (2%)
Frame = +1
Query: 1 VDVKVHYTLLDDEDPWIRTVDFTDKNAFGRCFCYRILVSTKIGHAVEDCKKYLKRDSLFD 180
++V V + LLDD+DPWIRT DFT A GRC YR+ + + G ++ + +LK + +
Sbjct: 237 IEVSVPFDLLDDDDPWIRTTDFTPSGAIGRCNFYRVSIPPRHGAKLKRARNFLKERRVQE 296
Query: 181 DENEFPGLTLTVRPEGPVPRCWWCFTVPRQESIPFKTLFLLNGLLHKGILNYHSLNEEFY 360
D P L + P+ +P F + +E I F+ +FL+N ++HKGI N H L++ F+
Sbjct: 297 DSLRRP-LKIVNEPDYGMPMSDPFFCIHHKEGIAFEIMFLVNAVMHKGIFNQHQLSDNFF 355
Query: 361 ELC---SSELGAMALRHMHIYNHQVYDAVGELKQV----LKGHKFLNDPTLTSDTMEIYR 519
+L S ++ AL+H+ Y V+DA LK V LK K D +EI R
Sbjct: 356 DLLRNQSLDINVAALKHICSYKQPVFDAHKGLKAVQEWLLKNPKLFKRSKQLDDIVEIRR 415
Query: 520 LAITPTKAYCLPPEIELSNRVLRQYRSVSDRFLRVSFMDENMEIMGSGSLTIATAPIAKE 699
LA+TPT+AYCLPPE+ELSNRVLR+Y++++DRFLRV+FMDE ++ + + +LT API ++
Sbjct: 416 LALTPTRAYCLPPEVELSNRVLRKYKNIADRFLRVTFMDEGLQTINANTLTYYVAPIVRD 475
Query: 700 VSSSS-PYRTAVFRKVKELLRKGFDLCGRHYSFLAFSANQL*DRSSWFFANGENVTVEEI 876
++S+S +T +FR+VK +L GF+LCGR YSFLAFS+NQL DRS+WFFA ++V +I
Sbjct: 476 ITSTSFSQKTRIFRRVKSILTDGFNLCGRRYSFLAFSSNQLRDRSAWFFAEDGKISVGQI 535
Query: 877 *EWMGRFYNSNVAKHAARMGQCFSSTYSTM-XXXXXXXXXXXXXXRNGYVFSDGIGKISS 1053
+WMGRF N N+AK AARMGQCFSSTY+T+ RNGY+FSDGIG I+
Sbjct: 536 RKWMGRFTNRNIAKCAARMGQCFSSTYATVEVPSSEVNHALPDIERNGYIFSDGIGTITP 595
Query: 1054 DLAREVSQKLQLNMNPPSAFQIRFGGYKAVVTAWAAESGHSYKLALRPSMKKFESDHQML 1233
DLA+EV++KL+L++N P A+QIR+ G K VV W A+ G +L+LRPSM KF+S+H L
Sbjct: 596 DLAKEVAEKLKLDINLPCAYQIRYAGCKGVVACWPAQ-GDGIRLSLRPSMNKFQSNHTTL 654
Query: 1234 EIISWSRF 1257
EI SW+RF
Sbjct: 655 EICSWTRF 662
Score = 285 bits (728), Expect(2) = 0.0
Identities = 139/237 (58%), Positives = 169/237 (71%), Gaps = 1/237 (0%)
Frame = +2
Query: 1256 FLPGYLNRQIITLLSSLGVDDDVFFRLQNEMIYKLGEMLDKVEVAFDVLTSSCTGVLPNM 1435
F PG+LNRQIITLLS+L V D+VF+ +Q M+ KL +ML +VAFDV+T SC N
Sbjct: 662 FQPGFLNRQIITLLSTLNVSDEVFWEMQTAMVSKLNKMLTDADVAFDVITKSCAEQ-GNT 720
Query: 1436 AAIVLNAGFNHEREPLLKDMLAAVRAVQLDDLLRKCRIFVDKGRWLMGCFDETEELEYGQ 1615
AAI+L+AGF + EP L+ ML +RA Q L K RIFV GRWLMGC DE LE GQ
Sbjct: 721 AAIMLSAGFKPQNEPHLRGMLTCIRAAQFWGLREKARIFVTSGRWLMGCLDELGVLEQGQ 780
Query: 1616 CFIRVSTPALKDCYRKHGSTIQLNTAST-ILTGKVIVAKNPCLHPGGIRVLEAVDLPQLH 1792
CFI+VS P L+ C+ KHGS + ++ G V++AKNPCLHPG +R+LEAVD P LH
Sbjct: 781 CFIQVSNPCLETCFSKHGSKFSETKKNLQVIKGTVVIAKNPCLHPGDVRILEAVDAPGLH 840
Query: 1793 HLVDCLVFPQKGLRPHPNEASGSDLDGDMYFVSWDSRLVPSSGQSWEPMDYNLGEAQ 1963
HL DCLVFPQKG RPH NEASGSDLDGD+YFV+WD L+P S +SW PM Y+ EA+
Sbjct: 841 HLHDCLVFPQKGDRPHTNEASGSDLDGDLYFVTWDDNLIPPSKKSWTPMQYDAAEAK 897
Score = 102 bits (254), Expect = 2e-18
Identities = 52/123 (42%), Positives = 81/123 (65%), Gaps = 2/123 (1%)
Frame = +3
Query: 2031 KREGEIVSGYISSISKYATRRRSDVKDNLQHAYRTLRREFRMYFEGER--SSKILDEVEE 2204
KRE E+V+G+I S+ +R++ D+K+ L+H+Y L++EFR FEG ++ D+ +
Sbjct: 1061 KREEELVTGHIWSMPMSNSRKQGDLKERLKHSYSALKKEFRQVFEGMNLDVEQLTDDEKN 1120
Query: 2205 SRYEAKASAWYRVAYHPIWIRNALQEGKHVSSGYLSHPLLLSFPWICAEYLARNQELRSG 2384
+YE KASAWY+VAYHP WI+ +L+ + + G + +LSF WI A+YLAR + R G
Sbjct: 1121 LQYERKASAWYQVAYHPKWIKKSLELQESDAPG---NATMLSFSWIAADYLARIKIKRRG 1177
Query: 2385 SSG 2393
+ G
Sbjct: 1178 TEG 1180