BLASTX nr result
ID: Ephedra29_contig00001487
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra29_contig00001487
(972 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ADE77177.1 unknown [Picea sitchensis] 196 2e-59
CDY19734.1 BnaA09g03870D [Brassica napus] 189 1e-56
CDX99972.1 BnaC09g03290D [Brassica napus] 189 1e-56
KJB49937.1 hypothetical protein B456_008G146200 [Gossypium raimo... 186 3e-56
JAU14928.1 Sm-like protein LSM4 [Noccaea caerulescens] JAU51861.... 187 5e-56
XP_018454695.1 PREDICTED: sm-like protein LSM4 [Raphanus sativus] 187 5e-56
XP_018478727.1 PREDICTED: sm-like protein LSM4 [Raphanus sativus... 187 5e-56
XP_013595712.1 PREDICTED: sm-like protein LSM4 [Brassica olerace... 187 5e-56
XP_010493981.1 PREDICTED: sm-like protein LSM4 [Camelina sativa] 187 5e-56
XP_009151187.1 PREDICTED: sm-like protein LSM4 [Brassica rapa] X... 187 5e-56
NP_198124.1 Small nuclear ribonucleoprotein family protein [Arab... 187 5e-56
XP_006288890.1 hypothetical protein CARUB_v10002252mg [Capsella ... 187 5e-56
AAM65462.1 glycine rich protein-like [Arabidopsis thaliana] 187 5e-56
KJB49935.1 hypothetical protein B456_008G146200 [Gossypium raimo... 186 5e-56
XP_010550988.1 PREDICTED: sm-like protein LSM4 [Tarenaya hassler... 187 6e-56
XP_013587313.1 PREDICTED: sm-like protein LSM4 [Brassica olerace... 187 6e-56
XP_018436959.1 PREDICTED: sm-like protein LSM4 [Raphanus sativus... 187 7e-56
XP_006408062.1 hypothetical protein EUTSA_v10021732mg [Eutrema s... 187 7e-56
XP_002874352.1 hypothetical protein ARALYDRAFT_326933 [Arabidops... 187 8e-56
KNA20524.1 hypothetical protein SOVF_051390 isoform A [Spinacia ... 187 8e-56
>ADE77177.1 unknown [Picea sitchensis]
Length = 146
Score = 196 bits (498), Expect = 2e-59
Identities = 91/91 (100%), Positives = 91/91 (100%)
Frame = -2
Query: 851 MLPLSLLRTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 672
MLPLSLLRTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY
Sbjct: 1 MLPLSLLRTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
Query: 671 IRGNTIKYLRVPDEVIDKVQEEKRIDRKPPI 579
IRGNTIKYLRVPDEVIDKVQEEKRIDRKPPI
Sbjct: 61 IRGNTIKYLRVPDEVIDKVQEEKRIDRKPPI 91
>CDY19734.1 BnaA09g03870D [Brassica napus]
Length = 133
Score = 189 bits (479), Expect = 1e-56
Identities = 89/92 (96%), Positives = 90/92 (97%), Gaps = 1/92 (1%)
Frame = -2
Query: 854 KMLPLSLLRTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPEC 675
KMLPLSLL+TAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPEC
Sbjct: 4 KMLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPEC 63
Query: 674 YIRGNTIKYLRVPDEVIDKVQEEK-RIDRKPP 582
YIRGNTIKYLRVPDEVIDKVQEEK R DRKPP
Sbjct: 64 YIRGNTIKYLRVPDEVIDKVQEEKTRTDRKPP 95
>CDX99972.1 BnaC09g03290D [Brassica napus]
Length = 140
Score = 189 bits (479), Expect = 1e-56
Identities = 89/92 (96%), Positives = 90/92 (97%), Gaps = 1/92 (1%)
Frame = -2
Query: 854 KMLPLSLLRTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPEC 675
KMLPLSLL+TAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPEC
Sbjct: 9 KMLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPEC 68
Query: 674 YIRGNTIKYLRVPDEVIDKVQEEK-RIDRKPP 582
YIRGNTIKYLRVPDEVIDKVQEEK R DRKPP
Sbjct: 69 YIRGNTIKYLRVPDEVIDKVQEEKTRTDRKPP 100
>KJB49937.1 hypothetical protein B456_008G146200 [Gossypium raimondii]
Length = 101
Score = 186 bits (473), Expect = 3e-56
Identities = 87/94 (92%), Positives = 90/94 (95%), Gaps = 2/94 (2%)
Frame = -2
Query: 851 MLPLSLLRTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 672
MLPLSLL+TAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY
Sbjct: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
Query: 671 IRGNTIKYLRVPDEVIDKVQEE--KRIDRKPPIM 576
IRGNTIKYLRVPDEVIDKVQEE R DRKPP++
Sbjct: 61 IRGNTIKYLRVPDEVIDKVQEETKSRADRKPPVL 94
>JAU14928.1 Sm-like protein LSM4 [Noccaea caerulescens] JAU51861.1 Sm-like
protein LSM4 [Noccaea caerulescens] JAU60712.1 Sm-like
protein LSM4 [Noccaea caerulescens] JAU93288.1 Sm-like
protein LSM4 [Noccaea caerulescens]
Length = 129
Score = 187 bits (474), Expect = 5e-56
Identities = 88/91 (96%), Positives = 89/91 (97%), Gaps = 1/91 (1%)
Frame = -2
Query: 851 MLPLSLLRTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 672
MLPLSLL+TAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY
Sbjct: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
Query: 671 IRGNTIKYLRVPDEVIDKVQEEK-RIDRKPP 582
IRGNTIKYLRVPDEVIDKVQEEK R DRKPP
Sbjct: 61 IRGNTIKYLRVPDEVIDKVQEEKTRTDRKPP 91
>XP_018454695.1 PREDICTED: sm-like protein LSM4 [Raphanus sativus]
Length = 129
Score = 187 bits (474), Expect = 5e-56
Identities = 88/91 (96%), Positives = 89/91 (97%), Gaps = 1/91 (1%)
Frame = -2
Query: 851 MLPLSLLRTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 672
MLPLSLL+TAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY
Sbjct: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
Query: 671 IRGNTIKYLRVPDEVIDKVQEEK-RIDRKPP 582
IRGNTIKYLRVPDEVIDKVQEEK R DRKPP
Sbjct: 61 IRGNTIKYLRVPDEVIDKVQEEKTRTDRKPP 91
>XP_018478727.1 PREDICTED: sm-like protein LSM4 [Raphanus sativus] XP_018478728.1
PREDICTED: sm-like protein LSM4 [Raphanus sativus]
Length = 129
Score = 187 bits (474), Expect = 5e-56
Identities = 88/91 (96%), Positives = 89/91 (97%), Gaps = 1/91 (1%)
Frame = -2
Query: 851 MLPLSLLRTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 672
MLPLSLL+TAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY
Sbjct: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
Query: 671 IRGNTIKYLRVPDEVIDKVQEEK-RIDRKPP 582
IRGNTIKYLRVPDEVIDKVQEEK R DRKPP
Sbjct: 61 IRGNTIKYLRVPDEVIDKVQEEKTRTDRKPP 91
>XP_013595712.1 PREDICTED: sm-like protein LSM4 [Brassica oleracea var. oleracea]
XP_013595713.1 PREDICTED: sm-like protein LSM4 [Brassica
oleracea var. oleracea] XP_013643934.1 PREDICTED:
sm-like protein LSM4 [Brassica napus]
Length = 129
Score = 187 bits (474), Expect = 5e-56
Identities = 88/91 (96%), Positives = 89/91 (97%), Gaps = 1/91 (1%)
Frame = -2
Query: 851 MLPLSLLRTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 672
MLPLSLL+TAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY
Sbjct: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
Query: 671 IRGNTIKYLRVPDEVIDKVQEEK-RIDRKPP 582
IRGNTIKYLRVPDEVIDKVQEEK R DRKPP
Sbjct: 61 IRGNTIKYLRVPDEVIDKVQEEKTRTDRKPP 91
>XP_010493981.1 PREDICTED: sm-like protein LSM4 [Camelina sativa]
Length = 129
Score = 187 bits (474), Expect = 5e-56
Identities = 88/91 (96%), Positives = 89/91 (97%), Gaps = 1/91 (1%)
Frame = -2
Query: 851 MLPLSLLRTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 672
MLPLSLL+TAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY
Sbjct: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
Query: 671 IRGNTIKYLRVPDEVIDKVQEEK-RIDRKPP 582
IRGNTIKYLRVPDEVIDKVQEEK R DRKPP
Sbjct: 61 IRGNTIKYLRVPDEVIDKVQEEKTRTDRKPP 91
>XP_009151187.1 PREDICTED: sm-like protein LSM4 [Brassica rapa] XP_009151188.1
PREDICTED: sm-like protein LSM4 [Brassica rapa]
XP_009111743.1 PREDICTED: sm-like protein LSM4 [Brassica
rapa] XP_013613180.1 PREDICTED: sm-like protein LSM4
[Brassica oleracea var. oleracea] XP_013703698.1
PREDICTED: sm-like protein LSM4 [Brassica napus]
Length = 129
Score = 187 bits (474), Expect = 5e-56
Identities = 88/91 (96%), Positives = 89/91 (97%), Gaps = 1/91 (1%)
Frame = -2
Query: 851 MLPLSLLRTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 672
MLPLSLL+TAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY
Sbjct: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
Query: 671 IRGNTIKYLRVPDEVIDKVQEEK-RIDRKPP 582
IRGNTIKYLRVPDEVIDKVQEEK R DRKPP
Sbjct: 61 IRGNTIKYLRVPDEVIDKVQEEKTRTDRKPP 91
>NP_198124.1 Small nuclear ribonucleoprotein family protein [Arabidopsis
thaliana] F4K4E3.1 RecName: Full=Sm-like protein LSM4;
Short=AtLSM4; AltName: Full=Protein EMBRYO DEFECTIVE
1644; AltName: Full=U6 snRNA-associated Sm-like protein
LSM4 AED93718.1 Small nuclear ribonucleoprotein family
protein [Arabidopsis thaliana] OAO92904.1 LSM4
[Arabidopsis thaliana]
Length = 129
Score = 187 bits (474), Expect = 5e-56
Identities = 88/91 (96%), Positives = 89/91 (97%), Gaps = 1/91 (1%)
Frame = -2
Query: 851 MLPLSLLRTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 672
MLPLSLL+TAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY
Sbjct: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
Query: 671 IRGNTIKYLRVPDEVIDKVQEEK-RIDRKPP 582
IRGNTIKYLRVPDEVIDKVQEEK R DRKPP
Sbjct: 61 IRGNTIKYLRVPDEVIDKVQEEKTRTDRKPP 91
>XP_006288890.1 hypothetical protein CARUB_v10002252mg [Capsella rubella]
XP_010455092.1 PREDICTED: sm-like protein LSM4 [Camelina
sativa] EOA21788.1 hypothetical protein
CARUB_v10002252mg [Capsella rubella]
Length = 129
Score = 187 bits (474), Expect = 5e-56
Identities = 88/91 (96%), Positives = 89/91 (97%), Gaps = 1/91 (1%)
Frame = -2
Query: 851 MLPLSLLRTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 672
MLPLSLL+TAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY
Sbjct: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
Query: 671 IRGNTIKYLRVPDEVIDKVQEEK-RIDRKPP 582
IRGNTIKYLRVPDEVIDKVQEEK R DRKPP
Sbjct: 61 IRGNTIKYLRVPDEVIDKVQEEKTRTDRKPP 91
>AAM65462.1 glycine rich protein-like [Arabidopsis thaliana]
Length = 129
Score = 187 bits (474), Expect = 5e-56
Identities = 88/91 (96%), Positives = 89/91 (97%), Gaps = 1/91 (1%)
Frame = -2
Query: 851 MLPLSLLRTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 672
MLPLSLL+TAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY
Sbjct: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
Query: 671 IRGNTIKYLRVPDEVIDKVQEEK-RIDRKPP 582
IRGNTIKYLRVPDEVIDKVQEEK R DRKPP
Sbjct: 61 IRGNTIKYLRVPDEVIDKVQEEKTRTDRKPP 91
>KJB49935.1 hypothetical protein B456_008G146200 [Gossypium raimondii]
Length = 121
Score = 186 bits (473), Expect = 5e-56
Identities = 87/94 (92%), Positives = 90/94 (95%), Gaps = 2/94 (2%)
Frame = -2
Query: 851 MLPLSLLRTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 672
MLPLSLL+TAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY
Sbjct: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
Query: 671 IRGNTIKYLRVPDEVIDKVQEE--KRIDRKPPIM 576
IRGNTIKYLRVPDEVIDKVQEE R DRKPP++
Sbjct: 61 IRGNTIKYLRVPDEVIDKVQEETKSRADRKPPVL 94
>XP_010550988.1 PREDICTED: sm-like protein LSM4 [Tarenaya hassleriana]
Length = 136
Score = 187 bits (474), Expect = 6e-56
Identities = 88/91 (96%), Positives = 89/91 (97%), Gaps = 1/91 (1%)
Frame = -2
Query: 851 MLPLSLLRTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 672
MLPLSLL+TAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY
Sbjct: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
Query: 671 IRGNTIKYLRVPDEVIDKVQEEK-RIDRKPP 582
IRGNTIKYLRVPDEVIDKVQEEK R DRKPP
Sbjct: 61 IRGNTIKYLRVPDEVIDKVQEEKSRTDRKPP 91
>XP_013587313.1 PREDICTED: sm-like protein LSM4 [Brassica oleracea var. oleracea]
XP_013677653.1 PREDICTED: sm-like protein LSM4 [Brassica
napus]
Length = 137
Score = 187 bits (474), Expect = 6e-56
Identities = 88/91 (96%), Positives = 89/91 (97%), Gaps = 1/91 (1%)
Frame = -2
Query: 851 MLPLSLLRTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 672
MLPLSLL+TAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY
Sbjct: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
Query: 671 IRGNTIKYLRVPDEVIDKVQEEK-RIDRKPP 582
IRGNTIKYLRVPDEVIDKVQEEK R DRKPP
Sbjct: 61 IRGNTIKYLRVPDEVIDKVQEEKTRTDRKPP 91
>XP_018436959.1 PREDICTED: sm-like protein LSM4 [Raphanus sativus] XP_018438848.1
PREDICTED: sm-like protein LSM4 [Raphanus sativus]
Length = 138
Score = 187 bits (474), Expect = 7e-56
Identities = 88/91 (96%), Positives = 89/91 (97%), Gaps = 1/91 (1%)
Frame = -2
Query: 851 MLPLSLLRTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 672
MLPLSLL+TAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY
Sbjct: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
Query: 671 IRGNTIKYLRVPDEVIDKVQEEK-RIDRKPP 582
IRGNTIKYLRVPDEVIDKVQEEK R DRKPP
Sbjct: 61 IRGNTIKYLRVPDEVIDKVQEEKTRTDRKPP 91
>XP_006408062.1 hypothetical protein EUTSA_v10021732mg [Eutrema salsugineum]
ESQ49515.1 hypothetical protein EUTSA_v10021732mg
[Eutrema salsugineum]
Length = 138
Score = 187 bits (474), Expect = 7e-56
Identities = 88/91 (96%), Positives = 89/91 (97%), Gaps = 1/91 (1%)
Frame = -2
Query: 851 MLPLSLLRTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 672
MLPLSLL+TAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY
Sbjct: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
Query: 671 IRGNTIKYLRVPDEVIDKVQEEK-RIDRKPP 582
IRGNTIKYLRVPDEVIDKVQEEK R DRKPP
Sbjct: 61 IRGNTIKYLRVPDEVIDKVQEEKTRTDRKPP 91
>XP_002874352.1 hypothetical protein ARALYDRAFT_326933 [Arabidopsis lyrata subsp.
lyrata] EFH50611.1 hypothetical protein
ARALYDRAFT_326933 [Arabidopsis lyrata subsp. lyrata]
Length = 143
Score = 187 bits (474), Expect = 8e-56
Identities = 88/91 (96%), Positives = 89/91 (97%), Gaps = 1/91 (1%)
Frame = -2
Query: 851 MLPLSLLRTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 672
MLPLSLL+TAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY
Sbjct: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
Query: 671 IRGNTIKYLRVPDEVIDKVQEEK-RIDRKPP 582
IRGNTIKYLRVPDEVIDKVQEEK R DRKPP
Sbjct: 61 IRGNTIKYLRVPDEVIDKVQEEKSRTDRKPP 91
>KNA20524.1 hypothetical protein SOVF_051390 isoform A [Spinacia oleracea]
Length = 144
Score = 187 bits (474), Expect = 8e-56
Identities = 88/91 (96%), Positives = 89/91 (97%), Gaps = 1/91 (1%)
Frame = -2
Query: 851 MLPLSLLRTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 672
MLPLSLL+TAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY
Sbjct: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
Query: 671 IRGNTIKYLRVPDEVIDKVQEEK-RIDRKPP 582
IRGNTIKYLRVPDEVIDKVQEEK R DRKPP
Sbjct: 61 IRGNTIKYLRVPDEVIDKVQEEKSRTDRKPP 91