BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra29_contig00001292
         (1073 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CAJ30045.1 conserved hypothetical protein [Magnetospirillum gryp...    55   3e-13
JAN71055.1 hypothetical protein, partial [Daphnia magna]               63   2e-08
JAN90935.1 hypothetical protein [Daphnia magna]                        58   5e-07
JAN88183.1 hypothetical protein [Daphnia magna]                        58   5e-07
JAN94717.1 hypothetical protein [Daphnia magna]                        57   1e-06
ERB82501.1 hypothetical protein S11_4511 [Escherichia coli B26-1]      54   2e-06
CEH44534.1 hypothetical protein XAC3610_10050001 [Xanthomonas ci...    57   2e-06
CEH53215.1 hypothetical protein XACS582_11310001 [Xanthomonas ci...    56   4e-06
JAN67125.1 hypothetical protein, partial [Daphnia magna]               47   7e-06
CCG06603.1 unnamed protein product, partial [Pararhodospirillum ...    55   7e-06

>CAJ30045.1 conserved hypothetical protein [Magnetospirillum gryphiswaldense
           MSR-1] CDK99198.1 protein of unknown function
           [Magnetospirillum gryphiswaldense MSR-1 v2]
          Length = 259

 Score = 55.1 bits (131), Expect(2) = 3e-13
 Identities = 28/56 (50%), Positives = 34/56 (60%)
 Frame = -2

Query: 727 SLTHYAKGTPFHLRKKGYDWMARIGFEGSVALPYHGFFSPFPHGTAPLWFMEEYVG 560
           SLTHY KGTP   ++       R    G+V+LP  G FSPFPHGT+ L   EEY+G
Sbjct: 69  SLTHYTKGTPSPFKRA--PTACRHSVSGTVSLPLSGCFSPFPHGTSSLSVTEEYLG 122



 Score = 49.3 bits (116), Expect(2) = 3e-13
 Identities = 23/40 (57%), Positives = 29/40 (72%), Gaps = 1/40 (2%)
 Frame = -3

Query: 900 LAFHP*PQVIPVFCHIRGFGPTMQL-DGSTCSWLDRSVSG 784
           +AFHP PQ+IP F + RGFGP + +   STC W+D SVSG
Sbjct: 1   MAFHPYPQIIPDFFNRRGFGPPVGVTPPSTCPWIDHSVSG 40


>JAN71055.1 hypothetical protein, partial [Daphnia magna]
          Length = 156

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 42/96 (43%), Positives = 47/96 (48%), Gaps = 10/96 (10%)
 Frame = -2

Query: 817 NLLMARSIGFGSIGNNSMHPPTGLSCCTH*----------SLTHYAKGTPFHLRKKGYDW 668
           NLLMARS+GFGS   N          C +           SLTHY KGT   LR      
Sbjct: 14  NLLMARSLGFGSNATNYDRAINTRFRCAYTYRLKLASYTKSLTHYTKGTLSGLRPPT--- 70

Query: 667 MARIGFEGSVALPYHGFFSPFPHGTAPLWFMEEYVG 560
             R    GS++LP  G FSPFPHGT  L  M EY+G
Sbjct: 71  ACRQPVSGSISLPLSGCFSPFPHGTCSLSVMHEYLG 106


>JAN90935.1 hypothetical protein [Daphnia magna]
          Length = 103

 Score = 57.8 bits (138), Expect = 5e-07
 Identities = 30/56 (53%), Positives = 35/56 (62%)
 Frame = -2

Query: 727 SLTHYAKGTPFHLRKKGYDWMARIGFEGSVALPYHGFFSPFPHGTAPLWFMEEYVG 560
           SLTHY KGTP  LR      + R    GS++LP  G FSPFPHGT  L  +EEY+G
Sbjct: 28  SLTHYTKGTPSGLRPPT---VCRQPVSGSISLPLSGCFSPFPHGTCSLSVIEEYLG 80


>JAN88183.1 hypothetical protein [Daphnia magna]
          Length = 105

 Score = 57.8 bits (138), Expect = 5e-07
 Identities = 30/56 (53%), Positives = 34/56 (60%)
 Frame = -2

Query: 727 SLTHYAKGTPFHLRKKGYDWMARIGFEGSVALPYHGFFSPFPHGTAPLWFMEEYVG 560
           SLTHY KGTP    + G     R+   GSV+LP  G FSPFPHGT  L   EEY+G
Sbjct: 3   SLTHYTKGTPSP--RLGAPTACRLPISGSVSLPLSGCFSPFPHGTCSLSVAEEYLG 56


>JAN94717.1 hypothetical protein [Daphnia magna]
          Length = 140

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 30/56 (53%), Positives = 34/56 (60%)
 Frame = -2

Query: 727 SLTHYAKGTPFHLRKKGYDWMARIGFEGSVALPYHGFFSPFPHGTAPLWFMEEYVG 560
           SLTHY KGTP  LR      + R    GS++LP  G FSPFPHGT  L  M EY+G
Sbjct: 28  SLTHYTKGTPSGLRPPT---VCRQPVSGSISLPLSGCFSPFPHGTCSLSVMHEYLG 80


>ERB82501.1 hypothetical protein S11_4511 [Escherichia coli B26-1]
          Length = 40

 Score = 53.9 bits (128), Expect = 2e-06
 Identities = 24/34 (70%), Positives = 26/34 (76%)
 Frame = +1

Query: 838 RTEPTYVAKYGDDLWLGVKGQPKIGDSWFTAKSI 939
           RTEPT V K  DDLWLGVKGQ   GDSWF+ K+I
Sbjct: 7   RTEPTNVEKLADDLWLGVKGQSNRGDSWFSPKAI 40


>CEH44534.1 hypothetical protein XAC3610_10050001 [Xanthomonas citri pv. citri]
           CEH63558.1 hypothetical protein XACLG97_9100001
           [Xanthomonas citri pv. citri] CEI15539.1 hypothetical
           protein XACB302_8740001 [Xanthomonas citri pv. citri]
           CEI35905.1 hypothetical protein XACJJ10_1720001
           [Xanthomonas citri pv. citri] CEH45422.1 hypothetical
           protein XACLD7_12360002 [Xanthomonas citri pv. citri]
           CEH54604.1 hypothetical protein XACJK48_7680001
           [Xanthomonas citri pv. citri] CEH43546.1 hypothetical
           protein XAC3615_11480001 [Xanthomonas citri pv. citri]
           CEH65841.1 hypothetical protein XACG102_9020002
           [Xanthomonas citri pv. citri] CEH54703.1 hypothetical
           protein XACLE3_7360001 [Xanthomonas citri pv. citri]
           CEH78138.1 hypothetical protein XAC3612_2290002
           [Xanthomonas citri pv. citri] CEI07008.1 hypothetical
           protein XACG115_2260002 [Xanthomonas citri pv. citri]
           CEI16169.1 hypothetical protein XACLG98_2430001
           [Xanthomonas citri pv. citri] CEH96247.1 hypothetical
           protein XACG117_2160001 [Xanthomonas citri pv. citri]
           CEH96682.1 hypothetical protein XACB100_2230001
           [Xanthomonas citri pv. citri] CEH78239.1 hypothetical
           protein XACLH37_2340001 [Xanthomonas citri pv. citri]
           CEH86566.1 hypothetical protein XAC3607_3090001
           [Xanthomonas citri pv. citri] CEJ25532.1 hypothetical
           protein XACE116_10060001 [Xanthomonas citri pv. citri]
           CEJ20942.1 hypothetical protein XACE116_10060001
           [Xanthomonas citri pv. citri] CEJ48968.1 hypothetical
           protein XAB3213_4620001 [Xanthomonas citri pv. bilvae]
           CEJ48844.1 hypothetical protein XAB3213_4450024
           [Xanthomonas citri pv. bilvae] CEL46621.1 hypothetical
           protein XAC439_9960001 [Xanthomonas citri pv. citri]
           CEL39943.1 hypothetical protein XACJK4_2420001
           [Xanthomonas citri pv. citri] CEL48745.1 hypothetical
           protein XACJM35_2180001 [Xanthomonas citri pv. citri]
           CEL34943.1 hypothetical protein XAC4311_2140001
           [Xanthomonas citri pv. citri] CEE39488.1 hypothetical
           protein XAC9322_730001 [Xanthomonas citri pv. citri]
           CEF35109.1 hypothetical protein XAC40_1450004
           [Xanthomonas citri pv. citri] CEF34767.1 hypothetical
           protein XAC40_1010148 [Xanthomonas citri pv. citri]
           CEE39458.1 hypothetical protein XAC3824_910001
           [Xanthomonas citri pv. citri] CEE24891.1 hypothetical
           protein XAC908_1160001 [Xanthomonas citri pv. citri]
           CEE49112.1 hypothetical protein XAC2911_820001
           [Xanthomonas citri pv. citri] CEF22935.1 hypothetical
           protein XACJK2_2290004 [Xanthomonas citri pv. citri]
           CEF22093.1 hypothetical protein XACJK2_1520016
           [Xanthomonas citri pv. citri] CEF21553.1 hypothetical
           protein XACJK2_1460072 [Xanthomonas citri pv. citri]
          Length = 150

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 43/110 (39%), Positives = 52/110 (47%), Gaps = 10/110 (9%)
 Frame = -2

Query: 862 LPHTWVR-SYHAIRWINLLMARSIGFGSIGNN--------SMHPPTGLSCCTH*-SLTHY 713
           +  TWVR S        L M RS GFGS   +        S+  P  +   T+  SLTHY
Sbjct: 1   MQQTWVRASSTCYGTFTLAMTRSPGFGSTARDYAPLSDSVSLRLPYTVKLATNSKSLTHY 60

Query: 712 AKGTPFHLRKKGYDWMARIGFEGSVALPYHGFFSPFPHGTAPLWFMEEYV 563
            KGT   LR             GS++LP  GFFSPFPHGT  L   +EY+
Sbjct: 61  TKGTQSLLRAPT---ACTHTVSGSISLPSPGFFSPFPHGTGSLSVGQEYL 107


>CEH53215.1 hypothetical protein XACS582_11310001 [Xanthomonas citri pv. citri]
           CEH94261.1 hypothetical protein XACS581_1990001
           [Xanthomonas citri pv. citri]
          Length = 150

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 42/110 (38%), Positives = 52/110 (47%), Gaps = 10/110 (9%)
 Frame = -2

Query: 862 LPHTWVRSYHAIRW-INLLMARSIGFGSIGNN--------SMHPPTGLSCCTH*-SLTHY 713
           +  TWVR+         L M RS GFGS   +        S+  P  +   T+  SLTHY
Sbjct: 1   MQQTWVRASSTCYGNFTLAMTRSPGFGSTARDYAPLSDSVSLRLPYTVKLATNSKSLTHY 60

Query: 712 AKGTPFHLRKKGYDWMARIGFEGSVALPYHGFFSPFPHGTAPLWFMEEYV 563
            KGT   LR             GS++LP  GFFSPFPHGT  L   +EY+
Sbjct: 61  TKGTQSLLRAPT---ACTHTVSGSISLPSPGFFSPFPHGTGSLSVGQEYL 107


>JAN67125.1 hypothetical protein, partial [Daphnia magna]
          Length = 159

 Score = 47.0 bits (110), Expect(3) = 7e-06
 Identities = 26/47 (55%), Positives = 32/47 (68%), Gaps = 1/47 (2%)
 Frame = -2

Query: 901 VGLSPLATSHPRILPHTWVRSYHA-IRWINLLMARSIGFGSIGNNSM 764
           +GLSPL T+HPRI  H+ VRS  A  R  NL+M RS GFGS  + S+
Sbjct: 17  IGLSPLNTTHPRIFQHSTVRSSSACYRTFNLVMPRSPGFGSNSSYSI 63



 Score = 26.6 bits (57), Expect(3) = 7e-06
 Identities = 18/43 (41%), Positives = 22/43 (51%)
 Frame = -3

Query: 720 PIMQKVRRSTFGKRDTTGWLASDLKALLHYHIMGSFHLSLTVL 592
           PIMQ+VR      R     +    + L H    G+FHLSLTVL
Sbjct: 88  PIMQEVRGQI--SRILPLLVGIRFQVLFHSPHRGAFHLSLTVL 128



 Score = 25.0 bits (53), Expect(3) = 7e-06
 Identities = 11/14 (78%), Positives = 12/14 (85%)
 Frame = -1

Query: 950 RSTAIDFAVNQLSP 909
           RST+IDFA NQL P
Sbjct: 1   RSTSIDFAENQLFP 14


>CCG06603.1 unnamed protein product, partial [Pararhodospirillum photometricum
           DSM 122]
          Length = 114

 Score = 54.7 bits (130), Expect = 7e-06
 Identities = 41/114 (35%), Positives = 56/114 (49%), Gaps = 8/114 (7%)
 Frame = -3

Query: 882 PQVIPVFCHIRGFGPTMQLDG-STCSWLDRSVSGQ*GTTQCIHXXXXXXAPINR*PIMQK 706
           PQVIPVF + RGFGP + +   STC WLD  VSG    T+         A   R  + ++
Sbjct: 1   PQVIPVFFNRRGFGPPVGVTPPSTCPWLDHPVSGLIRRTRRPLKTRFRCASTYRLKLARQ 60

Query: 705 VRRSTFGKRDTTG-------WLASDLKALLHYHIMGSFHLSLTVLLRYGSWRNT 565
           ++  T   + T          +    + L H    G+FHLSLTVL+ Y S R+T
Sbjct: 61  IKSLTHYTKGTPSPPKELRLLVGIRFQELFHSPHRGAFHLSLTVLVHYRSSRST 114