BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra29_contig00001234
         (1552 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_010534022.1 PREDICTED: F-box protein At5g03100-like [Tarenaya...    60   7e-06
XP_006306329.1 hypothetical protein CARUB_v10012204mg, partial [...    59   1e-05

>XP_010534022.1 PREDICTED: F-box protein At5g03100-like [Tarenaya hassleriana]
          Length = 475

 Score = 59.7 bits (143), Expect = 7e-06
 Identities = 49/174 (28%), Positives = 83/174 (47%), Gaps = 16/174 (9%)
 Frame = -2

Query: 1476 KTAIRCSTLSKTWKDLYKRLPCLYFHEGDLYDTDEDEDVKTQIQDLYIPKLVRCHNPKIQ 1297
            + AIR S LSK WKD++K +P + F   D   T ++      + D Y   L    +PKI+
Sbjct: 23   RDAIRTSVLSKRWKDIWKGVPKIVFEPFDHRITLDE-----SLSDAYEKTLSLHVSPKIK 77

Query: 1296 TFYIEISYM---SDGKFQKCVKDLVKYKVENLSLRSPDAVC-------------LPRSTF 1165
            TF +  ++    +  +  + +K  V ++VE+LSL     V              LP   +
Sbjct: 78   TFVVSCNFEPRDNGPRIDQWIKFAVDHRVEDLSLSLSFFVLDGISQPIPEFYHRLPEFLY 137

Query: 1164 GCQSLVTIKMGPLSMYNTPRDPLGFPKLRSCDLAVDIDKRLDMQKLNCLIRGCP 1003
              ++LVT+K+  +    TPR+ + +P L+S  LA      L  + +  ++ GCP
Sbjct: 138  NNKTLVTLKLDLVRCNLTPRNNISWPSLKSLTLAF---CTLSDELMVNILSGCP 188


>XP_006306329.1 hypothetical protein CARUB_v10012204mg, partial [Capsella rubella]
            EOA39227.1 hypothetical protein CARUB_v10012204mg,
            partial [Capsella rubella]
          Length = 375

 Score = 58.9 bits (141), Expect = 1e-05
 Identities = 74/294 (25%), Positives = 113/294 (38%), Gaps = 5/294 (1%)
 Frame = -2

Query: 1476 KTAIRCSTLSKTWKDLYKRLPCLYFHEGDLYDTDEDEDVKTQIQDLYIPKLVRCHN-PKI 1300
            K AI+ S LSK W+ ++  +P LYF +  L  TDED           I K +  H  PK+
Sbjct: 64   KFAIKTSLLSKRWRHVWCDVPSLYFEQYKL--TDEDS----------IDKTLSYHTAPKM 111

Query: 1299 QTFYIEISYMSDGKFQKCVKDLVKYKVENLSLRSPDAVC-LPRSTFGCQSLVTIKMGPLS 1123
              F++       G+  K +K  +   VENLSL   +  C +P   F   S+  +K     
Sbjct: 112  LNFHLR---TRTGRIDKWIKFAISRNVENLSLEVGNHECPIPDFFFINTSVKQLKFNLSF 168

Query: 1122 MYNTPRDPLGFPKLRSCDLAVDIDKRLDMQKLNCLIRGCPXXXXXXXXXXLMGKCPEPLV 943
               TP+D + +  LR   L      R+  + +  ++ GCP              C +P V
Sbjct: 169  TDLTPKDFVVWTSLRKLHLG---SCRVSDESIAKILSGCPVLESLTLYF-----CDQPTV 220

Query: 942  ISSPKLTNLDFGFWFEKEININDMALKIHIDAPELLTMRFYSWDGRKYTVEAHVQAPKLI 763
            +               K + +  + +  HI  P           G    +  HV   KL 
Sbjct: 221  LD------------LSKSLGLTKLDVDRHILVP-----------GPTQIIAPHVHTLKLR 257

Query: 762  EFV--CGPVDKGILSNVRCFKALKFIH-LVEIDVRPVDICMMFAALPLLEKLAF 610
              +  C  VD   L+  +      ++H +V  DV  V +  M   L   EKL F
Sbjct: 258  NSLLPCTLVDVSSLTEAKMDICFHYVHRMVTADVLQVMVLKMLEKLQNTEKLTF 311