BLASTX nr result

ID: Ephedra29_contig00000578 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra29_contig00000578
         (268 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ABR16523.1 unknown [Picea sitchensis]                                  69   9e-12

>ABR16523.1 unknown [Picea sitchensis]
          Length = 404

 Score = 68.9 bits (167), Expect = 9e-12
 Identities = 39/99 (39%), Positives = 57/99 (57%), Gaps = 17/99 (17%)
 Frame = -1

Query: 268 VHTDFAYTGFSGRTTEKSESLSPTSH----NQGAL-KTTP------------LESKWSCF 140
           +HTD AY+GF+G+  EK    S  S+    NQ  + +T+P            ++++ + F
Sbjct: 305 IHTDSAYSGFTGKNVEKPAVTSVYSYSVDENQIKISRTSPGQVDFNDTLTIYIQAEHNMF 364

Query: 139 TKPWSNLQDILDRVGDVELQVSYGLLGLLFLVMTTSWIF 23
              W  LQ  LD +GD ++Q+ YGLLGLL LV TTSW+F
Sbjct: 365 IHLWHRLQYSLDELGDTDMQIQYGLLGLLLLVTTTSWVF 403


Top