BLASTX nr result
ID: Ephedra29_contig00000135
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra29_contig00000135
(256 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AAT08694.1 chloroplast chlorophyll A-B binding protein 40 [Hyaci... 105 1e-26
ABK23091.1 unknown [Picea sitchensis] 102 2e-26
AAT08651.1 chloroplast chlorophyll A-B binding protein, partial ... 105 4e-26
AOM81061.1 chlorophyll a/b binding 1 protein [Oxybasis rubra] 104 1e-25
AAB61238.1 chlorophyll a/b-binding protein [Mesembryanthemum cry... 104 1e-25
AAT08668.1 chloroplast chlorophyll A-B binding protein 40, parti... 103 2e-25
AAB61237.1 chlorophyll a/b-binding protein [Mesembryanthemum cry... 103 3e-25
XP_010666512.1 PREDICTED: chlorophyll a-b binding protein, chlor... 103 3e-25
KNA16961.1 hypothetical protein SOVF_084380 [Spinacia oleracea] 103 4e-25
ABK26463.1 unknown [Picea sitchensis] 102 6e-25
P15193.1 RecName: Full=Chlorophyll a-b binding protein type 2 me... 102 7e-25
XP_019102970.1 PREDICTED: chlorophyll a-b binding protein, chlor... 102 8e-25
AAA60965.1 light-harvesting chlorophyll a/b binding protein of p... 102 8e-25
AAU89250.1 chloroplast light harvesting chlorophyll a/b binding ... 102 8e-25
AAU89255.1 chloroplast light harvesting chlorophyll a/b binding ... 102 9e-25
AAU89251.1 chloroplast light harvesting chlorophyll a/b binding ... 102 9e-25
CAA57407.1 light harvesting chlorophyll a /b-binding protein Lhc... 102 1e-24
ACN40044.1 unknown [Picea sitchensis] 102 1e-24
ACN40027.1 unknown [Picea sitchensis] 102 1e-24
ABK26071.1 unknown [Picea sitchensis] ABR17429.1 unknown [Picea ... 102 1e-24
>AAT08694.1 chloroplast chlorophyll A-B binding protein 40 [Hyacinthus
orientalis]
Length = 211
Score = 105 bits (262), Expect = 1e-26
Identities = 50/67 (74%), Positives = 54/67 (80%)
Frame = -2
Query: 201 SGSAALKGESRFTTRATRGKKVTVSTPDSPWYGPDRVKYLCPFSGEAPSYLTGEFPGDYG 22
S S+ + G+ RFT R T K TVS+ SPWYGPDRVKYL PFSGEAPSYLTGEFPGDYG
Sbjct: 22 SSSSGVSGDGRFTMRKTAAKPKTVSS-GSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYG 80
Query: 21 WDTAGLS 1
WDTAGLS
Sbjct: 81 WDTAGLS 87
>ABK23091.1 unknown [Picea sitchensis]
Length = 110
Score = 102 bits (254), Expect = 2e-26
Identities = 47/71 (66%), Positives = 52/71 (73%)
Frame = -2
Query: 213 SGRLSGSAALKGESRFTTRATRGKKVTVSTPDSPWYGPDRVKYLCPFSGEAPSYLTGEFP 34
+ +L G GE+R T R GKK ++ DSPWYGPDRV YL PFSGE PSYLTGEFP
Sbjct: 28 NNQLLGVGGGHGEARLTMRKATGKKSVAASSDSPWYGPDRVLYLGPFSGEPPSYLTGEFP 87
Query: 33 GDYGWDTAGLS 1
GDYGWDTAGLS
Sbjct: 88 GDYGWDTAGLS 98
>AAT08651.1 chloroplast chlorophyll A-B binding protein, partial [Hyacinthus
orientalis]
Length = 239
Score = 105 bits (261), Expect = 4e-26
Identities = 54/84 (64%), Positives = 61/84 (72%), Gaps = 8/84 (9%)
Frame = -2
Query: 228 TSRVSSGRLSGSAA--------LKGESRFTTRATRGKKVTVSTPDSPWYGPDRVKYLCPF 73
T +SS L+G+A + G+ RFT R T GK TVS+ SPWYGP+RVKYL PF
Sbjct: 16 TMALSSPSLAGTAVKLTPSSSVVSGDGRFTMRKTAGKPKTVSS-GSPWYGPERVKYLGPF 74
Query: 72 SGEAPSYLTGEFPGDYGWDTAGLS 1
SGEAPSYLTGEFPGDYGWDTAGLS
Sbjct: 75 SGEAPSYLTGEFPGDYGWDTAGLS 98
>AOM81061.1 chlorophyll a/b binding 1 protein [Oxybasis rubra]
Length = 267
Score = 104 bits (260), Expect = 1e-25
Identities = 55/84 (65%), Positives = 59/84 (70%), Gaps = 8/84 (9%)
Frame = -2
Query: 228 TSRVSSGRLSGSAA--------LKGESRFTTRATRGKKVTVSTPDSPWYGPDRVKYLCPF 73
T +SS L+G A + GE R T R T GK TVS+ SPWYGPDRVKYL PF
Sbjct: 5 TMALSSPSLAGKAVKLSPTASEILGEGRITMRKTAGKPKTVSS-GSPWYGPDRVKYLGPF 63
Query: 72 SGEAPSYLTGEFPGDYGWDTAGLS 1
SGEAPSYLTGEFPGDYGWDTAGLS
Sbjct: 64 SGEAPSYLTGEFPGDYGWDTAGLS 87
>AAB61238.1 chlorophyll a/b-binding protein [Mesembryanthemum crystallinum]
Length = 267
Score = 104 bits (259), Expect = 1e-25
Identities = 54/81 (66%), Positives = 58/81 (71%), Gaps = 8/81 (9%)
Frame = -2
Query: 219 VSSGRLSGSAA--------LKGESRFTTRATRGKKVTVSTPDSPWYGPDRVKYLCPFSGE 64
+SS L+G A + GE R T R T GK VS+ DSPWYGPDRVKYL PFSGE
Sbjct: 8 LSSPSLAGKAVKLNPTTSQILGEGRITMRKTAGKTKNVSS-DSPWYGPDRVKYLGPFSGE 66
Query: 63 APSYLTGEFPGDYGWDTAGLS 1
APSYLTGEFPGDYGWDTAGLS
Sbjct: 67 APSYLTGEFPGDYGWDTAGLS 87
>AAT08668.1 chloroplast chlorophyll A-B binding protein 40, partial [Hyacinthus
orientalis]
Length = 237
Score = 103 bits (256), Expect = 2e-25
Identities = 49/65 (75%), Positives = 53/65 (81%)
Frame = -2
Query: 195 SAALKGESRFTTRATRGKKVTVSTPDSPWYGPDRVKYLCPFSGEAPSYLTGEFPGDYGWD 16
S+ + G+ RFT R T K TVS+ SPWYGPDRVKYL PFSGEAPSYLTGEFPGDYGWD
Sbjct: 9 SSGVSGDGRFTMRKTVAKPKTVSS-GSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWD 67
Query: 15 TAGLS 1
TAGLS
Sbjct: 68 TAGLS 72
>AAB61237.1 chlorophyll a/b-binding protein [Mesembryanthemum crystallinum]
Length = 267
Score = 103 bits (257), Expect = 3e-25
Identities = 53/84 (63%), Positives = 61/84 (72%), Gaps = 8/84 (9%)
Frame = -2
Query: 228 TSRVSSGRLSG--------SAALKGESRFTTRATRGKKVTVSTPDSPWYGPDRVKYLCPF 73
T +SS L+G ++ + GE R T R T GK +VS+ DSPWYGPDRVKYL PF
Sbjct: 5 TMALSSPSLAGKMVKLAPTASEILGEGRITMRKTAGKTKSVSS-DSPWYGPDRVKYLGPF 63
Query: 72 SGEAPSYLTGEFPGDYGWDTAGLS 1
SGE+PSYLTGEFPGDYGWDTAGLS
Sbjct: 64 SGESPSYLTGEFPGDYGWDTAGLS 87
>XP_010666512.1 PREDICTED: chlorophyll a-b binding protein, chloroplastic-like
[Beta vulgaris subsp. vulgaris] XP_019102971.1
PREDICTED: chlorophyll a-b binding protein,
chloroplastic-like [Beta vulgaris subsp. vulgaris]
KMS96058.1 hypothetical protein BVRB_002580 [Beta
vulgaris subsp. vulgaris] KMS96059.1 hypothetical
protein BVRB_002590 [Beta vulgaris subsp. vulgaris]
Length = 268
Score = 103 bits (257), Expect = 3e-25
Identities = 52/84 (61%), Positives = 57/84 (67%), Gaps = 8/84 (9%)
Frame = -2
Query: 228 TSRVSSGRLSGSAA--------LKGESRFTTRATRGKKVTVSTPDSPWYGPDRVKYLCPF 73
T +SS L+G A + GE R T R T GK ++ SPWYGPDRVKYL PF
Sbjct: 5 TMALSSPSLAGKAVKLGPTAWEILGEGRVTMRKTGGKTKPAASSSSPWYGPDRVKYLGPF 64
Query: 72 SGEAPSYLTGEFPGDYGWDTAGLS 1
SGEAPSYLTGEFPGDYGWDTAGLS
Sbjct: 65 SGEAPSYLTGEFPGDYGWDTAGLS 88
>KNA16961.1 hypothetical protein SOVF_084380 [Spinacia oleracea]
Length = 267
Score = 103 bits (256), Expect = 4e-25
Identities = 54/84 (64%), Positives = 58/84 (69%), Gaps = 8/84 (9%)
Frame = -2
Query: 228 TSRVSSGRLSGSAA--------LKGESRFTTRATRGKKVTVSTPDSPWYGPDRVKYLCPF 73
T +SS L+G A + GE R T R T GK TV + SPWYGPDRVKYL PF
Sbjct: 5 TMALSSPSLAGKAVKLGPTASEIIGEGRITMRKTAGKPKTVQS-SSPWYGPDRVKYLGPF 63
Query: 72 SGEAPSYLTGEFPGDYGWDTAGLS 1
SGEAPSYLTGEFPGDYGWDTAGLS
Sbjct: 64 SGEAPSYLTGEFPGDYGWDTAGLS 87
>ABK26463.1 unknown [Picea sitchensis]
Length = 251
Score = 102 bits (254), Expect = 6e-25
Identities = 47/71 (66%), Positives = 52/71 (73%)
Frame = -2
Query: 213 SGRLSGSAALKGESRFTTRATRGKKVTVSTPDSPWYGPDRVKYLCPFSGEAPSYLTGEFP 34
+ +L G GE+R T R GKK ++ DSPWYGPDRV YL PFSGE PSYLTGEFP
Sbjct: 28 NNQLLGVGGGHGEARLTMRKATGKKSVAASSDSPWYGPDRVLYLGPFSGEPPSYLTGEFP 87
Query: 33 GDYGWDTAGLS 1
GDYGWDTAGLS
Sbjct: 88 GDYGWDTAGLS 98
>P15193.1 RecName: Full=Chlorophyll a-b binding protein type 2 member 1A,
chloroplastic; AltName: Full=Chlorophyll a-b binding
protein type II 1A; Short=CAB; AltName: Full=LHCP;
Flags: Precursor CAA32657.1 unnamed protein product
[Pinus sylvestris]
Length = 278
Score = 102 bits (255), Expect = 7e-25
Identities = 47/71 (66%), Positives = 52/71 (73%)
Frame = -2
Query: 213 SGRLSGSAALKGESRFTTRATRGKKVTVSTPDSPWYGPDRVKYLCPFSGEAPSYLTGEFP 34
+ +L G GE+R T R GKK ++ DSPWYGPDRV YL PFSGE PSYLTGEFP
Sbjct: 28 NNQLLGVGGAHGEARLTMRKATGKKSVAASIDSPWYGPDRVLYLGPFSGEPPSYLTGEFP 87
Query: 33 GDYGWDTAGLS 1
GDYGWDTAGLS
Sbjct: 88 GDYGWDTAGLS 98
>XP_019102970.1 PREDICTED: chlorophyll a-b binding protein, chloroplastic-like
[Beta vulgaris subsp. vulgaris] KMS96057.1 hypothetical
protein BVRB_002570 [Beta vulgaris subsp. vulgaris]
Length = 267
Score = 102 bits (254), Expect = 8e-25
Identities = 54/84 (64%), Positives = 58/84 (69%), Gaps = 8/84 (9%)
Frame = -2
Query: 228 TSRVSSGRLSGSAA--------LKGESRFTTRATRGKKVTVSTPDSPWYGPDRVKYLCPF 73
T +SS L+G A + GE R T R T GK VS+ SPWYGPDRVKYL PF
Sbjct: 5 TMALSSPSLAGKAVNLGPNASEILGEGRITMRKTAGKPKQVSS-GSPWYGPDRVKYLGPF 63
Query: 72 SGEAPSYLTGEFPGDYGWDTAGLS 1
SGEAPSYLTGEFPGDYGWDTAGLS
Sbjct: 64 SGEAPSYLTGEFPGDYGWDTAGLS 87
>AAA60965.1 light-harvesting chlorophyll a/b binding protein of photosystem II
[Ginkgo biloba]
Length = 270
Score = 102 bits (254), Expect = 8e-25
Identities = 53/83 (63%), Positives = 56/83 (67%), Gaps = 10/83 (12%)
Frame = -2
Query: 219 VSSGRLSGSAALK----------GESRFTTRATRGKKVTVSTPDSPWYGPDRVKYLCPFS 70
V+S +G LK GE R T R T KKV S+ SPWYGPDRVKYL PFS
Sbjct: 9 VASSAFAGQIVLKPQNEFVGGVHGEGRITMRKTASKKVVASS-GSPWYGPDRVKYLGPFS 67
Query: 69 GEAPSYLTGEFPGDYGWDTAGLS 1
GEAPSYLTGEFPGDYGWDTAGLS
Sbjct: 68 GEAPSYLTGEFPGDYGWDTAGLS 90
>AAU89250.1 chloroplast light harvesting chlorophyll a/b binding protein,
partial [Pinus echinata]
Length = 253
Score = 102 bits (253), Expect = 8e-25
Identities = 48/68 (70%), Positives = 51/68 (75%)
Frame = -2
Query: 204 LSGSAALKGESRFTTRATRGKKVTVSTPDSPWYGPDRVKYLCPFSGEAPSYLTGEFPGDY 25
L A + GE+R T R KKV+VS SPWYGPDRV YL PFSGE PSYLTGEFPGDY
Sbjct: 24 LGVGAGVHGEARVTMRKATTKKVSVSASTSPWYGPDRVLYLGPFSGEPPSYLTGEFPGDY 83
Query: 24 GWDTAGLS 1
GWDTAGLS
Sbjct: 84 GWDTAGLS 91
>AAU89255.1 chloroplast light harvesting chlorophyll a/b binding protein,
partial [Pinus roxburghii]
Length = 256
Score = 102 bits (253), Expect = 9e-25
Identities = 48/68 (70%), Positives = 51/68 (75%)
Frame = -2
Query: 204 LSGSAALKGESRFTTRATRGKKVTVSTPDSPWYGPDRVKYLCPFSGEAPSYLTGEFPGDY 25
L A + GE+R T R KKV+VS SPWYGPDRV YL PFSGE PSYLTGEFPGDY
Sbjct: 24 LGVGAGVHGEARVTMRKAATKKVSVSASTSPWYGPDRVLYLGPFSGEPPSYLTGEFPGDY 83
Query: 24 GWDTAGLS 1
GWDTAGLS
Sbjct: 84 GWDTAGLS 91
>AAU89251.1 chloroplast light harvesting chlorophyll a/b binding protein,
partial [Pinus ponderosa]
Length = 256
Score = 102 bits (253), Expect = 9e-25
Identities = 48/68 (70%), Positives = 51/68 (75%)
Frame = -2
Query: 204 LSGSAALKGESRFTTRATRGKKVTVSTPDSPWYGPDRVKYLCPFSGEAPSYLTGEFPGDY 25
L A + GE+R T R KKV+VS SPWYGPDRV YL PFSGE PSYLTGEFPGDY
Sbjct: 24 LGVGAGVHGEARVTMRKATTKKVSVSASTSPWYGPDRVLYLGPFSGEPPSYLTGEFPGDY 83
Query: 24 GWDTAGLS 1
GWDTAGLS
Sbjct: 84 GWDTAGLS 91
>CAA57407.1 light harvesting chlorophyll a /b-binding protein Lhcb1*1 [Picea
abies]
Length = 278
Score = 102 bits (254), Expect = 1e-24
Identities = 47/71 (66%), Positives = 52/71 (73%)
Frame = -2
Query: 213 SGRLSGSAALKGESRFTTRATRGKKVTVSTPDSPWYGPDRVKYLCPFSGEAPSYLTGEFP 34
+ +L G GE+R T R GKK ++ DSPWYGPDRV YL PFSGE PSYLTGEFP
Sbjct: 28 NNQLLGVGGGHGEARLTMRKATGKKSVAASSDSPWYGPDRVLYLGPFSGEPPSYLTGEFP 87
Query: 33 GDYGWDTAGLS 1
GDYGWDTAGLS
Sbjct: 88 GDYGWDTAGLS 98
>ACN40044.1 unknown [Picea sitchensis]
Length = 278
Score = 102 bits (254), Expect = 1e-24
Identities = 47/71 (66%), Positives = 52/71 (73%)
Frame = -2
Query: 213 SGRLSGSAALKGESRFTTRATRGKKVTVSTPDSPWYGPDRVKYLCPFSGEAPSYLTGEFP 34
+ +L G GE+R T R GKK ++ DSPWYGPDRV YL PFSGE PSYLTGEFP
Sbjct: 28 NNQLLGVGGGHGEARLTMRKATGKKSVAASSDSPWYGPDRVLYLGPFSGEPPSYLTGEFP 87
Query: 33 GDYGWDTAGLS 1
GDYGWDTAGLS
Sbjct: 88 GDYGWDTAGLS 98
>ACN40027.1 unknown [Picea sitchensis]
Length = 278
Score = 102 bits (254), Expect = 1e-24
Identities = 47/71 (66%), Positives = 52/71 (73%)
Frame = -2
Query: 213 SGRLSGSAALKGESRFTTRATRGKKVTVSTPDSPWYGPDRVKYLCPFSGEAPSYLTGEFP 34
+ +L G GE+R T R GKK ++ DSPWYGPDRV YL PFSGE PSYLTGEFP
Sbjct: 28 NNQLLGVGGGHGEARLTMRKATGKKSVAASSDSPWYGPDRVLYLGPFSGEQPSYLTGEFP 87
Query: 33 GDYGWDTAGLS 1
GDYGWDTAGLS
Sbjct: 88 GDYGWDTAGLS 98
>ABK26071.1 unknown [Picea sitchensis] ABR17429.1 unknown [Picea sitchensis]
Length = 278
Score = 102 bits (254), Expect = 1e-24
Identities = 47/71 (66%), Positives = 52/71 (73%)
Frame = -2
Query: 213 SGRLSGSAALKGESRFTTRATRGKKVTVSTPDSPWYGPDRVKYLCPFSGEAPSYLTGEFP 34
+ +L G GE+R T R GKK ++ DSPWYGPDRV YL PFSGE PSYLTGEFP
Sbjct: 28 NNQLLGVGGGHGEARLTMRKATGKKSVAASSDSPWYGPDRVLYLGPFSGEPPSYLTGEFP 87
Query: 33 GDYGWDTAGLS 1
GDYGWDTAGLS
Sbjct: 88 GDYGWDTAGLS 98