BLASTX nr result
ID: Ephedra29_contig00000014
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra29_contig00000014
(1507 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_003557886.1 PREDICTED: RNA-binding protein CP29B, chloroplast... 239 3e-72
BAJ86334.1 predicted protein [Hordeum vulgare subsp. vulgare] 238 1e-71
ABK24055.1 unknown [Picea sitchensis] 235 3e-70
XP_018477761.1 PREDICTED: RNA-binding protein CP29B, chloroplast... 226 3e-67
XP_013631475.1 PREDICTED: RNA-binding protein CP29B, chloroplast... 226 4e-67
CDX91345.1 BnaC04g08050D [Brassica napus] 226 5e-67
XP_009143521.1 PREDICTED: RNA-binding protein CP29B, chloroplast... 226 7e-67
CDX74978.1 BnaA05g07240D [Brassica napus] 226 7e-67
XP_013692252.1 PREDICTED: RNA-binding protein CP29B, chloroplast... 225 1e-66
XP_010516981.1 PREDICTED: RNA-binding protein CP29B, chloroplast... 225 1e-66
XP_009133135.1 PREDICTED: RNA-binding protein CP29B, chloroplast... 225 1e-66
XP_013688985.1 PREDICTED: RNA-binding protein CP29B, chloroplast... 225 1e-66
XP_018476986.1 PREDICTED: RNA-binding protein CP29B, chloroplast... 225 2e-66
XP_004958419.1 PREDICTED: RNA-binding protein CP29B, chloroplast... 224 2e-66
XP_009141639.1 PREDICTED: RNA-binding protein CP29B, chloroplast... 224 2e-66
XP_013682669.1 PREDICTED: RNA-binding protein CP29B, chloroplast... 224 3e-66
XP_013738305.1 PREDICTED: RNA-binding protein CP29B, chloroplast... 224 3e-66
XP_013744757.1 PREDICTED: RNA-binding protein CP29B, chloroplast... 224 3e-66
XP_013744756.1 PREDICTED: RNA-binding protein CP29B, chloroplast... 224 3e-66
XP_006294745.1 hypothetical protein CARUB_v10023790mg [Capsella ... 224 3e-66
>XP_003557886.1 PREDICTED: RNA-binding protein CP29B, chloroplastic [Brachypodium
distachyon] KQK21515.1 hypothetical protein BRADI_1g61250
[Brachypodium distachyon]
Length = 272
Score = 239 bits (610), Expect = 3e-72
Identities = 120/202 (59%), Positives = 149/202 (73%)
Frame = +3
Query: 519 KLFVGNLSYNVDSQQLAGLFQEAGEVNMVEVIYDRPTGRSRGFGFVTMATEEGCKTAFER 698
++FVGNL ++VDS QLAGLF++AG V MVEVIYD+ TGRSRGFGFVTM+T E + A E+
Sbjct: 78 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVEQ 137
Query: 699 FNGYELDGRALRVNSGPPPPKDFSSPRGSPRESYGGNRESXXXXXXXXXXXXXXYTDSEN 878
NGY LDGR ++VNSGPPPP+D SSPRG +S GG R+ + +N
Sbjct: 138 LNGYVLDGRTIKVNSGPPPPRDQSSPRGFREQSSGGFRQQSSRGP----------SGGDN 187
Query: 879 RIFVGNLPWSADDLSLQQLFNDYGTVLNTRVVTDRATGRSRGFGFVTMSSREEVEKAIAN 1058
R++VGNL W+ DD +L LFN+ G+VL RV+ DR +GRSRGFGFVT S EEVEKA++N
Sbjct: 188 RVYVGNLSWNVDDSALANLFNEQGSVLGARVIYDRESGRSRGFGFVTYGSSEEVEKAVSN 247
Query: 1059 LNGTDLDGRQLRVDSAEARPPR 1124
L+GTDLDGRQ+RV AEAR PR
Sbjct: 248 LDGTDLDGRQIRVTVAEARQPR 269
>BAJ86334.1 predicted protein [Hordeum vulgare subsp. vulgare]
Length = 268
Score = 238 bits (606), Expect = 1e-71
Identities = 121/202 (59%), Positives = 150/202 (74%)
Frame = +3
Query: 519 KLFVGNLSYNVDSQQLAGLFQEAGEVNMVEVIYDRPTGRSRGFGFVTMATEEGCKTAFER 698
++FVGNL ++VDS QLAGLF++AG V MVEVIYD+ TGRSRGFGFVTM+T E + A ER
Sbjct: 75 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 134
Query: 699 FNGYELDGRALRVNSGPPPPKDFSSPRGSPRESYGGNRESXXXXXXXXXXXXXXYTDSEN 878
NGY LDGRAL+VNSGPPPPKD SSPRG RE GG R+ + +N
Sbjct: 135 LNGYVLDGRALKVNSGPPPPKDQSSPRGF-REQSGGFRQQSSRGP----------SGGDN 183
Query: 879 RIFVGNLPWSADDLSLQQLFNDYGTVLNTRVVTDRATGRSRGFGFVTMSSREEVEKAIAN 1058
R++VGNL W+ DD +L LFN+ G+VL RV+ DR +GRSRGFGFVT + +EV+KA++N
Sbjct: 184 RVYVGNLSWNVDDSALANLFNEQGSVLGARVIYDRESGRSRGFGFVTYGTSDEVQKAVSN 243
Query: 1059 LNGTDLDGRQLRVDSAEARPPR 1124
L+GTD+DGRQ+RV AEAR PR
Sbjct: 244 LDGTDMDGRQIRVTVAEARQPR 265
>ABK24055.1 unknown [Picea sitchensis]
Length = 299
Score = 235 bits (599), Expect = 3e-70
Identities = 130/262 (49%), Positives = 167/262 (63%), Gaps = 1/262 (0%)
Frame = +3
Query: 345 PRLFLSFRHNLSHVVARRVSMAPESALAAXXXXXXXXXXXXXXXXRNEPSPVMDDSGYKL 524
P + + N + +AR V+MAP A + PS + K+
Sbjct: 68 PLFSSTHKKNNNSFLARSVTMAPRQA-------SEWEEDEEEDIENSSPS-----ANLKV 115
Query: 525 FVGNLSYNVDSQQLAGLFQEAGEVNMVEVIYDRPTGRSRGFGFVTMATEEGCKTAFERFN 704
FVGNL ++VDS +LA LF+++G+V MVEVIYDR TGRSRGF FVTMAT+ A E+FN
Sbjct: 116 FVGNLPWSVDSAELAELFKDSGDVTMVEVIYDRQTGRSRGFAFVTMATQADADEAVEKFN 175
Query: 705 GYELDGRALRVNSGPPPPKDFSSPRGSPR-ESYGGNRESXXXXXXXXXXXXXXYTDSENR 881
GYE GR LRVNSGPPPPKD +PRG R E GN +S NR
Sbjct: 176 GYEYQGRTLRVNSGPPPPKDSFAPRGGFRNEKPSGN------------------YNSANR 217
Query: 882 IFVGNLPWSADDLSLQQLFNDYGTVLNTRVVTDRATGRSRGFGFVTMSSREEVEKAIANL 1061
+FVGNLPW ADDLSL+QLF+D+G V+ +VV DR TGRSRGFGFVT+SS +E+E+AI++L
Sbjct: 218 VFVGNLPWGADDLSLEQLFSDHGKVMEAKVVYDRETGRSRGFGFVTLSSPQEIEEAISSL 277
Query: 1062 NGTDLDGRQLRVDSAEARPPRF 1127
+G+D+DGRQ++V AE +P F
Sbjct: 278 DGSDMDGRQIKVTLAETKPASF 299
>XP_018477761.1 PREDICTED: RNA-binding protein CP29B, chloroplastic-like [Raphanus
sativus] XP_018477833.1 PREDICTED: RNA-binding protein
CP29B, chloroplastic-like [Raphanus sativus]
Length = 281
Score = 226 bits (577), Expect = 3e-67
Identities = 116/205 (56%), Positives = 141/205 (68%)
Frame = +3
Query: 510 SGYKLFVGNLSYNVDSQQLAGLFQEAGEVNMVEVIYDRPTGRSRGFGFVTMATEEGCKTA 689
S KLFVGNL +NVDS QLA LF+ AG V MVEVIYD+ TGRSRGFGFVTM++ +TA
Sbjct: 83 SDLKLFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSSASEVETA 142
Query: 690 FERFNGYELDGRALRVNSGPPPPKDFSSPRGSPRESYGGNRESXXXXXXXXXXXXXXYTD 869
++FNGYELDGR LRVN+GPPPPK S PR S+GG
Sbjct: 143 EQQFNGYELDGRQLRVNAGPPPPKREDSFSRGPRSSFGGGGGGGGGGSG---------AG 193
Query: 870 SENRIFVGNLPWSADDLSLQQLFNDYGTVLNTRVVTDRATGRSRGFGFVTMSSREEVEKA 1049
S NR++VGNL W DD++L+ LF + G V+ RV+ DR +GRS+GFGFVT +S +EV+ A
Sbjct: 194 SGNRVYVGNLSWGVDDMALESLFGEQGKVVEARVIYDRDSGRSKGFGFVTYNSAQEVQNA 253
Query: 1050 IANLNGTDLDGRQLRVDSAEARPPR 1124
I L+G DLDGRQ+RV AEARPPR
Sbjct: 254 IRTLDGADLDGRQIRVSEAEARPPR 278
>XP_013631475.1 PREDICTED: RNA-binding protein CP29B, chloroplastic [Brassica
oleracea var. oleracea]
Length = 289
Score = 226 bits (577), Expect = 4e-67
Identities = 118/215 (54%), Positives = 145/215 (67%), Gaps = 3/215 (1%)
Frame = +3
Query: 489 PSPVMDDS---GYKLFVGNLSYNVDSQQLAGLFQEAGEVNMVEVIYDRPTGRSRGFGFVT 659
P P + S KLFVGNL +NVDS QLA LF+ AG+V MVEVIYD+ TGRSRGFGFVT
Sbjct: 83 PPPPQEQSFSADLKLFVGNLPFNVDSAQLAQLFESAGKVEMVEVIYDKVTGRSRGFGFVT 142
Query: 660 MATEEGCKTAFERFNGYELDGRALRVNSGPPPPKDFSSPRGSPRESYGGNRESXXXXXXX 839
M++ + A ++FNGYELDGR LRVN+GPPPPK S PR S+GG+
Sbjct: 143 MSSVSEVEAAAQQFNGYELDGRQLRVNAGPPPPKREDSFSRGPRSSFGGSGYGGGGGGGG 202
Query: 840 XXXXXXXYTDSENRIFVGNLPWSADDLSLQQLFNDYGTVLNTRVVTDRATGRSRGFGFVT 1019
S NR++VGNL W DD++L+ LF + G V+ RV+ DR +GRS+GFGFVT
Sbjct: 203 ---------GSGNRVYVGNLSWGVDDMALESLFGEQGKVVEARVIYDRDSGRSKGFGFVT 253
Query: 1020 MSSREEVEKAIANLNGTDLDGRQLRVDSAEARPPR 1124
+S +EV+ AI LNG DLDGRQ+RV AEARPPR
Sbjct: 254 YNSAQEVQNAIQTLNGADLDGRQIRVSEAEARPPR 288
>CDX91345.1 BnaC04g08050D [Brassica napus]
Length = 290
Score = 226 bits (577), Expect = 5e-67
Identities = 118/215 (54%), Positives = 145/215 (67%), Gaps = 3/215 (1%)
Frame = +3
Query: 489 PSPVMDDS---GYKLFVGNLSYNVDSQQLAGLFQEAGEVNMVEVIYDRPTGRSRGFGFVT 659
P P + S KLFVGNL +NVDS QLA LF+ AG+V MVEVIYD+ TGRSRGFGFVT
Sbjct: 84 PPPPQEQSFSADLKLFVGNLPFNVDSAQLAQLFESAGKVEMVEVIYDKVTGRSRGFGFVT 143
Query: 660 MATEEGCKTAFERFNGYELDGRALRVNSGPPPPKDFSSPRGSPRESYGGNRESXXXXXXX 839
M++ + A ++FNGYELDGR LRVN+GPPPPK S PR S+GG+
Sbjct: 144 MSSVSEVEAAAQQFNGYELDGRQLRVNAGPPPPKREDSFSRGPRSSFGGSGYGGGGGGGG 203
Query: 840 XXXXXXXYTDSENRIFVGNLPWSADDLSLQQLFNDYGTVLNTRVVTDRATGRSRGFGFVT 1019
S NR++VGNL W DD++L+ LF + G V+ RV+ DR +GRS+GFGFVT
Sbjct: 204 ---------GSGNRVYVGNLSWGVDDMALESLFGEQGKVVEARVIYDRDSGRSKGFGFVT 254
Query: 1020 MSSREEVEKAIANLNGTDLDGRQLRVDSAEARPPR 1124
+S +EV+ AI LNG DLDGRQ+RV AEARPPR
Sbjct: 255 YNSAQEVQNAIQTLNGADLDGRQIRVSEAEARPPR 289
>XP_009143521.1 PREDICTED: RNA-binding protein CP29B, chloroplastic-like [Brassica
rapa] XP_013694669.1 PREDICTED: RNA-binding protein
CP29B, chloroplastic-like [Brassica napus]
Length = 283
Score = 226 bits (575), Expect = 7e-67
Identities = 118/215 (54%), Positives = 143/215 (66%), Gaps = 3/215 (1%)
Frame = +3
Query: 489 PSPVMDDS---GYKLFVGNLSYNVDSQQLAGLFQEAGEVNMVEVIYDRPTGRSRGFGFVT 659
P P + S KLFVGNL +NVDS QLA LF+ AG V MVEVIYD+ TGRSRGFGFVT
Sbjct: 80 PPPPQEQSFSADLKLFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVT 139
Query: 660 MATEEGCKTAFERFNGYELDGRALRVNSGPPPPKDFSSPRGSPRESYGGNRESXXXXXXX 839
M++ + A ++FNGYELDGR LRVN+GPPPPK S PR S+GG
Sbjct: 140 MSSVSEVEAAAQQFNGYELDGRQLRVNAGPPPPKREDSFSRGPRSSFGGGGGGGG----- 194
Query: 840 XXXXXXXYTDSENRIFVGNLPWSADDLSLQQLFNDYGTVLNTRVVTDRATGRSRGFGFVT 1019
S NR++VGNL W DD++L+ LF + G V+ RV+ DR +GRS+GFGFVT
Sbjct: 195 ---------GSGNRVYVGNLSWGVDDMALESLFGEQGKVVEARVIYDRDSGRSKGFGFVT 245
Query: 1020 MSSREEVEKAIANLNGTDLDGRQLRVDSAEARPPR 1124
+S +EV+ AI LNG DLDGRQ+RV AEARPPR
Sbjct: 246 YNSAQEVQNAIQTLNGADLDGRQIRVSEAEARPPR 280
>CDX74978.1 BnaA05g07240D [Brassica napus]
Length = 283
Score = 226 bits (575), Expect = 7e-67
Identities = 118/215 (54%), Positives = 143/215 (66%), Gaps = 3/215 (1%)
Frame = +3
Query: 489 PSPVMDDS---GYKLFVGNLSYNVDSQQLAGLFQEAGEVNMVEVIYDRPTGRSRGFGFVT 659
P P + S KLFVGNL +NVDS QLA LF+ AG V MVEVIYD+ TGRSRGFGFVT
Sbjct: 80 PPPPQEQSFSADLKLFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVT 139
Query: 660 MATEEGCKTAFERFNGYELDGRALRVNSGPPPPKDFSSPRGSPRESYGGNRESXXXXXXX 839
M++ + A ++FNGYELDGR LRVN+GPPPPK S PR S+GG
Sbjct: 140 MSSVSEVEAAAQQFNGYELDGRQLRVNAGPPPPKREDSFSRGPRSSFGGGGGGGG----- 194
Query: 840 XXXXXXXYTDSENRIFVGNLPWSADDLSLQQLFNDYGTVLNTRVVTDRATGRSRGFGFVT 1019
S NR++VGNL W DD++L+ LF + G V+ RV+ DR +GRS+GFGFVT
Sbjct: 195 ---------GSGNRVYVGNLSWGVDDMALESLFGEQGKVVEARVIYDRDSGRSKGFGFVT 245
Query: 1020 MSSREEVEKAIANLNGTDLDGRQLRVDSAEARPPR 1124
+S +EV+ AI LNG DLDGRQ+RV AEARPPR
Sbjct: 246 YNSAQEVQNAIQTLNGADLDGRQIRVSEAEARPPR 280
>XP_013692252.1 PREDICTED: RNA-binding protein CP29B, chloroplastic-like [Brassica
napus]
Length = 290
Score = 225 bits (574), Expect = 1e-66
Identities = 118/215 (54%), Positives = 144/215 (66%), Gaps = 3/215 (1%)
Frame = +3
Query: 489 PSPVMDDS---GYKLFVGNLSYNVDSQQLAGLFQEAGEVNMVEVIYDRPTGRSRGFGFVT 659
P P + S KLFVGNL +NVDS QLA LF+ AG+V MVEVIYD+ TGRSRGFGFVT
Sbjct: 84 PPPPQEQSFSADLKLFVGNLPFNVDSAQLAQLFESAGKVEMVEVIYDKVTGRSRGFGFVT 143
Query: 660 MATEEGCKTAFERFNGYELDGRALRVNSGPPPPKDFSSPRGSPRESYGGNRESXXXXXXX 839
M++ + A ++FNGYELDGR LRVN+GPPPPK S PR S+GG
Sbjct: 144 MSSVSEVEAAAQQFNGYELDGRQLRVNAGPPPPKREDSFSRGPRSSFGGAGYGGGGGGGG 203
Query: 840 XXXXXXXYTDSENRIFVGNLPWSADDLSLQQLFNDYGTVLNTRVVTDRATGRSRGFGFVT 1019
S NR++VGNL W DD++L+ LF + G V+ RV+ DR +GRS+GFGFVT
Sbjct: 204 ---------GSGNRVYVGNLSWGVDDMALESLFGEQGKVVEARVIYDRDSGRSKGFGFVT 254
Query: 1020 MSSREEVEKAIANLNGTDLDGRQLRVDSAEARPPR 1124
+S +EV+ AI LNG DLDGRQ+RV AEARPPR
Sbjct: 255 YNSAQEVQNAIQTLNGADLDGRQIRVSEAEARPPR 289
>XP_010516981.1 PREDICTED: RNA-binding protein CP29B, chloroplastic [Camelina sativa]
Length = 291
Score = 225 bits (574), Expect = 1e-66
Identities = 117/215 (54%), Positives = 145/215 (67%), Gaps = 3/215 (1%)
Frame = +3
Query: 489 PSPVMDDS---GYKLFVGNLSYNVDSQQLAGLFQEAGEVNMVEVIYDRPTGRSRGFGFVT 659
P+P + S KLFVGNL +NVDS QLA LF+ AG V MVEVIYD+ TGRSRGFGFVT
Sbjct: 83 PAPQQEQSFSADLKLFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKITGRSRGFGFVT 142
Query: 660 MATEEGCKTAFERFNGYELDGRALRVNSGPPPPKDFSSPRGSPRESYGGNRESXXXXXXX 839
M++ + A ++FNGYELDGR LRVN+GPPPPK PR S+GG+
Sbjct: 143 MSSVSEVEAAAQQFNGYELDGRPLRVNAGPPPPKREDGFSRGPRSSFGGSGSGYGGGSS- 201
Query: 840 XXXXXXXYTDSENRIFVGNLPWSADDLSLQQLFNDYGTVLNTRVVTDRATGRSRGFGFVT 1019
S NR++VGNL W DD++L+ LF + G V+ RV+ DR +GRS+GFGFVT
Sbjct: 202 --------AGSGNRVYVGNLSWGVDDMALESLFAEQGKVVEARVIYDRDSGRSKGFGFVT 253
Query: 1020 MSSREEVEKAIANLNGTDLDGRQLRVDSAEARPPR 1124
+S +EV+ AI +LNG DLDGRQ+RV AEARPPR
Sbjct: 254 YNSSQEVQNAINSLNGADLDGRQIRVSEAEARPPR 288
>XP_009133135.1 PREDICTED: RNA-binding protein CP29B, chloroplastic-like [Brassica
rapa]
Length = 291
Score = 225 bits (574), Expect = 1e-66
Identities = 117/215 (54%), Positives = 143/215 (66%), Gaps = 3/215 (1%)
Frame = +3
Query: 489 PSPVMDDS---GYKLFVGNLSYNVDSQQLAGLFQEAGEVNMVEVIYDRPTGRSRGFGFVT 659
P P + S KLFVGNL +NVDS QLA LF+ AG V MVEVIYD+ TGRSRGFGFVT
Sbjct: 83 PPPQQEQSFSADLKLFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKETGRSRGFGFVT 142
Query: 660 MATEEGCKTAFERFNGYELDGRALRVNSGPPPPKDFSSPRGSPRESYGGNRESXXXXXXX 839
M++ + A ++FNGYELDGR LRVN+GPPPPK S PR S+G +
Sbjct: 143 MSSVSEVEAAAQQFNGYELDGRPLRVNAGPPPPKREDSFSRGPRSSFGSSGSGYGGGAA- 201
Query: 840 XXXXXXXYTDSENRIFVGNLPWSADDLSLQQLFNDYGTVLNTRVVTDRATGRSRGFGFVT 1019
S NR++VGNL W DD++L+ LF + G V+ RV+ DR +GRS+GFGFVT
Sbjct: 202 --------AGSGNRVYVGNLSWGVDDMALESLFGEQGKVVEARVIYDRDSGRSKGFGFVT 253
Query: 1020 MSSREEVEKAIANLNGTDLDGRQLRVDSAEARPPR 1124
+S +EV+ AI LNG DLDGRQ+RV AEARPPR
Sbjct: 254 YNSAQEVQNAIRTLNGADLDGRQIRVSEAEARPPR 288
>XP_013688985.1 PREDICTED: RNA-binding protein CP29B, chloroplastic-like [Brassica
napus] CDY46764.1 BnaA03g17080D [Brassica napus]
Length = 291
Score = 225 bits (574), Expect = 1e-66
Identities = 117/215 (54%), Positives = 143/215 (66%), Gaps = 3/215 (1%)
Frame = +3
Query: 489 PSPVMDDS---GYKLFVGNLSYNVDSQQLAGLFQEAGEVNMVEVIYDRPTGRSRGFGFVT 659
P P + S KLFVGNL +NVDS QLA LF+ AG V MVEVIYD+ TGRSRGFGFVT
Sbjct: 83 PPPQQEQSFSADLKLFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKETGRSRGFGFVT 142
Query: 660 MATEEGCKTAFERFNGYELDGRALRVNSGPPPPKDFSSPRGSPRESYGGNRESXXXXXXX 839
M++ + A ++FNGYELDGR LRVN+GPPPPK S PR S+G +
Sbjct: 143 MSSVSEVEAAAQQFNGYELDGRPLRVNAGPPPPKREDSFSRGPRSSFGSSGSGYGGGAA- 201
Query: 840 XXXXXXXYTDSENRIFVGNLPWSADDLSLQQLFNDYGTVLNTRVVTDRATGRSRGFGFVT 1019
S NR++VGNL W DD++L+ LF + G V+ RV+ DR +GRS+GFGFVT
Sbjct: 202 --------AGSGNRVYVGNLSWGVDDMALESLFGEQGKVVEARVIYDRDSGRSKGFGFVT 253
Query: 1020 MSSREEVEKAIANLNGTDLDGRQLRVDSAEARPPR 1124
+S +EV+ AI LNG DLDGRQ+RV AEARPPR
Sbjct: 254 YNSAQEVQNAIRTLNGADLDGRQIRVSEAEARPPR 288
>XP_018476986.1 PREDICTED: RNA-binding protein CP29B, chloroplastic [Raphanus
sativus]
Length = 287
Score = 225 bits (573), Expect = 2e-66
Identities = 115/202 (56%), Positives = 141/202 (69%)
Frame = +3
Query: 519 KLFVGNLSYNVDSQQLAGLFQEAGEVNMVEVIYDRPTGRSRGFGFVTMATEEGCKTAFER 698
KLFVGNL ++VDS QLA LF+ AG V MVEVIYD+ TGRSRGFGFVTM++ + A ++
Sbjct: 92 KLFVGNLPFDVDSAQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSSVSEVEAAAQQ 151
Query: 699 FNGYELDGRALRVNSGPPPPKDFSSPRGSPRESYGGNRESXXXXXXXXXXXXXXYTDSEN 878
FNGYELDGRALRVN+GPPPPK S PR S+G + + S N
Sbjct: 152 FNGYELDGRALRVNAGPPPPKREDSFSRGPRGSFGSSGYGGGGGGG---------SGSGN 202
Query: 879 RIFVGNLPWSADDLSLQQLFNDYGTVLNTRVVTDRATGRSRGFGFVTMSSREEVEKAIAN 1058
R++VGNL W DD++L+ LF + G V RV+ DR +GRS+GFGFVT +S +EV+ AI N
Sbjct: 203 RVYVGNLSWGVDDMALESLFGEQGKVAEARVIYDRDSGRSKGFGFVTYNSAQEVQNAIRN 262
Query: 1059 LNGTDLDGRQLRVDSAEARPPR 1124
LNG DLDGRQ+RV AEARPPR
Sbjct: 263 LNGADLDGRQIRVSEAEARPPR 284
Score = 80.9 bits (198), Expect = 3e-13
Identities = 41/88 (46%), Positives = 55/88 (62%), Gaps = 2/88 (2%)
Frame = +3
Query: 510 SGYKLFVGNLSYNVDSQQLAGLFQEAGEVNMVEVIYDRPTGRSRGFGFVTMATEEGCKTA 689
SG +++VGNLS+ VD L LF E G+V VIYDR +GRS+GFGFVT + + + A
Sbjct: 200 SGNRVYVGNLSWGVDDMALESLFGEQGKVAEARVIYDRDSGRSKGFGFVTYNSAQEVQNA 259
Query: 690 FERFNGYELDGRALRVNSGP--PPPKDF 767
NG +LDGR +RV+ PP + F
Sbjct: 260 IRNLNGADLDGRQIRVSEAEARPPRRQF 287
>XP_004958419.1 PREDICTED: RNA-binding protein CP29B, chloroplastic-like [Setaria
italica] KQL26805.1 hypothetical protein SETIT_030823mg
[Setaria italica]
Length = 265
Score = 224 bits (570), Expect = 2e-66
Identities = 114/202 (56%), Positives = 143/202 (70%)
Frame = +3
Query: 519 KLFVGNLSYNVDSQQLAGLFQEAGEVNMVEVIYDRPTGRSRGFGFVTMATEEGCKTAFER 698
KLFVGNL ++VDS QLAGLF++AG V MVEV+YDR TGRSRGFGFVTM++ E A E+
Sbjct: 79 KLFVGNLPFSVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMSSAEEAGAAVEQ 138
Query: 699 FNGYELDGRALRVNSGPPPPKDFSSPRGSPRESYGGNRESXXXXXXXXXXXXXXYTDSEN 878
FNGY GR LRVNSGPPPP+D S+PR +PR GG + DS N
Sbjct: 139 FNGYTFQGRPLRVNSGPPPPRDDSAPR-APRGGGGGGN----------------FVDSGN 181
Query: 879 RIFVGNLPWSADDLSLQQLFNDYGTVLNTRVVTDRATGRSRGFGFVTMSSREEVEKAIAN 1058
+++VGNL W D+ +L+ LF++ G VL+ +V+ DR +GRSRGFGFVT S EEV AI+N
Sbjct: 182 KVYVGNLSWGVDNSTLENLFSEQGQVLDAKVIYDRESGRSRGFGFVTYGSAEEVNNAISN 241
Query: 1059 LNGTDLDGRQLRVDSAEARPPR 1124
L+G DLDGRQ+RV AE++P R
Sbjct: 242 LDGIDLDGRQIRVTVAESKPRR 263
Score = 85.5 bits (210), Expect = 5e-15
Identities = 42/85 (49%), Positives = 54/85 (63%)
Frame = +3
Query: 507 DSGYKLFVGNLSYNVDSQQLAGLFQEAGEVNMVEVIYDRPTGRSRGFGFVTMATEEGCKT 686
DSG K++VGNLS+ VD+ L LF E G+V +VIYDR +GRSRGFGFVT + E
Sbjct: 178 DSGNKVYVGNLSWGVDNSTLENLFSEQGQVLDAKVIYDRESGRSRGFGFVTYGSAEEVNN 237
Query: 687 AFERFNGYELDGRALRVNSGPPPPK 761
A +G +LDGR +RV P+
Sbjct: 238 AISNLDGIDLDGRQIRVTVAESKPR 262
>XP_009141639.1 PREDICTED: RNA-binding protein CP29B, chloroplastic-like [Brassica
rapa]
Length = 288
Score = 224 bits (572), Expect = 2e-66
Identities = 115/205 (56%), Positives = 141/205 (68%)
Frame = +3
Query: 510 SGYKLFVGNLSYNVDSQQLAGLFQEAGEVNMVEVIYDRPTGRSRGFGFVTMATEEGCKTA 689
S KLFVGNL +NVDS QLA LF+ AG V MVEVIYD+ TGRSRGFGFVTM++ +TA
Sbjct: 92 SDLKLFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSSASEVQTA 151
Query: 690 FERFNGYELDGRALRVNSGPPPPKDFSSPRGSPRESYGGNRESXXXXXXXXXXXXXXYTD 869
++FNGYELDGR LRVN+GPPPPK S PR S+G +
Sbjct: 152 EQQFNGYELDGRPLRVNAGPPPPKREDSFSRGPRSSFGSSGGGGGGG-----------AG 200
Query: 870 SENRIFVGNLPWSADDLSLQQLFNDYGTVLNTRVVTDRATGRSRGFGFVTMSSREEVEKA 1049
S NR++VGNL W DD++L+ LF + G V+ RV+ DR +GRS+GFGFVT +S +EV+ A
Sbjct: 201 SGNRVYVGNLSWGVDDMALESLFGEQGKVVEARVIYDRDSGRSKGFGFVTYNSAQEVQNA 260
Query: 1050 IANLNGTDLDGRQLRVDSAEARPPR 1124
I L+G DLDGRQ+RV AEARPPR
Sbjct: 261 IRTLDGADLDGRQIRVSEAEARPPR 285
>XP_013682669.1 PREDICTED: RNA-binding protein CP29B, chloroplastic-like isoform X1
[Brassica napus] XP_013682670.1 PREDICTED: RNA-binding
protein CP29B, chloroplastic-like isoform X1 [Brassica
napus] XP_013682671.1 PREDICTED: RNA-binding protein
CP29B, chloroplastic-like isoform X2 [Brassica napus]
Length = 290
Score = 224 bits (572), Expect = 3e-66
Identities = 115/205 (56%), Positives = 141/205 (68%)
Frame = +3
Query: 510 SGYKLFVGNLSYNVDSQQLAGLFQEAGEVNMVEVIYDRPTGRSRGFGFVTMATEEGCKTA 689
S KLFVGNL +NVDS QLA LF+ AG V MVEVIYD+ TGRSRGFGFVTM++ +TA
Sbjct: 92 SDLKLFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSSASEVQTA 151
Query: 690 FERFNGYELDGRALRVNSGPPPPKDFSSPRGSPRESYGGNRESXXXXXXXXXXXXXXYTD 869
++FNGYELDGR LRVN+GPPPPK S PR S+G +
Sbjct: 152 EQQFNGYELDGRPLRVNAGPPPPKREDSFSRGPRSSFGSSGGGYGGGGG---------AG 202
Query: 870 SENRIFVGNLPWSADDLSLQQLFNDYGTVLNTRVVTDRATGRSRGFGFVTMSSREEVEKA 1049
S NR++VGNL W DD++L+ LF + G V+ RV+ DR +GRS+GFGFVT +S +EV+ A
Sbjct: 203 SGNRVYVGNLSWGVDDMALESLFGEQGKVVEARVIYDRDSGRSKGFGFVTYNSAQEVQNA 262
Query: 1050 IANLNGTDLDGRQLRVDSAEARPPR 1124
I L+G DLDGRQ+RV AEARPPR
Sbjct: 263 IRTLDGADLDGRQIRVSEAEARPPR 287
>XP_013738305.1 PREDICTED: RNA-binding protein CP29B, chloroplastic-like [Brassica
napus] CDX79724.1 BnaC03g20600D [Brassica napus]
Length = 291
Score = 224 bits (572), Expect = 3e-66
Identities = 117/215 (54%), Positives = 143/215 (66%), Gaps = 3/215 (1%)
Frame = +3
Query: 489 PSPVMDDS---GYKLFVGNLSYNVDSQQLAGLFQEAGEVNMVEVIYDRPTGRSRGFGFVT 659
P P + S KLFVGNL +NVDS QLA LF+ AG V MVEVIYD+ TGRSRGFGFVT
Sbjct: 81 PPPQQEQSFSADLKLFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVT 140
Query: 660 MATEEGCKTAFERFNGYELDGRALRVNSGPPPPKDFSSPRGSPRESYGGNRESXXXXXXX 839
M++ + A ++FNGYELDGR LRVN+GPPPPK S PR S+G +
Sbjct: 141 MSSVSEVEAAEQQFNGYELDGRPLRVNAGPPPPKREDSFSRGPRSSFGSSGSGYGGGGGG 200
Query: 840 XXXXXXXYTDSENRIFVGNLPWSADDLSLQQLFNDYGTVLNTRVVTDRATGRSRGFGFVT 1019
S NR++VGNL W DD++L+ LF + G V+ RV+ DR +GRS+GFGFVT
Sbjct: 201 G-------AGSGNRVYVGNLSWGVDDMALESLFGEQGKVVEARVIYDRDSGRSKGFGFVT 253
Query: 1020 MSSREEVEKAIANLNGTDLDGRQLRVDSAEARPPR 1124
+S +EV+ AI LNG DLDGRQ+RV AEARPPR
Sbjct: 254 YNSAQEVQNAIRTLNGADLDGRQIRVSEAEARPPR 288
>XP_013744757.1 PREDICTED: RNA-binding protein CP29B, chloroplastic-like isoform X2
[Brassica napus]
Length = 292
Score = 224 bits (572), Expect = 3e-66
Identities = 115/205 (56%), Positives = 141/205 (68%)
Frame = +3
Query: 510 SGYKLFVGNLSYNVDSQQLAGLFQEAGEVNMVEVIYDRPTGRSRGFGFVTMATEEGCKTA 689
S KLFVGNL +NVDS QLA LF+ AG V MVEVIYD+ TGRSRGFGFVTM++ +TA
Sbjct: 92 SDLKLFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSSASEVETA 151
Query: 690 FERFNGYELDGRALRVNSGPPPPKDFSSPRGSPRESYGGNRESXXXXXXXXXXXXXXYTD 869
++FNGYELDGR LRVN+GPPPPK S PR S+G +
Sbjct: 152 EQQFNGYELDGRPLRVNAGPPPPKREDSFSRGPRSSFGSSGGGYGGGGGGG-------AG 204
Query: 870 SENRIFVGNLPWSADDLSLQQLFNDYGTVLNTRVVTDRATGRSRGFGFVTMSSREEVEKA 1049
S NR++VGNL W DD++L+ LF + G V+ RV+ DR +GRS+GFGFVT +S +EV+ A
Sbjct: 205 SGNRVYVGNLSWGVDDMALESLFGEQGKVVEARVIYDRDSGRSKGFGFVTYNSAQEVQNA 264
Query: 1050 IANLNGTDLDGRQLRVDSAEARPPR 1124
I L+G DLDGRQ+RV AEARPPR
Sbjct: 265 IRTLDGADLDGRQIRVSEAEARPPR 289
>XP_013744756.1 PREDICTED: RNA-binding protein CP29B, chloroplastic-like isoform X1
[Brassica napus] XP_013744758.1 PREDICTED: RNA-binding
protein CP29B, chloroplastic-like isoform X1 [Brassica
napus]
Length = 292
Score = 224 bits (572), Expect = 3e-66
Identities = 115/205 (56%), Positives = 141/205 (68%)
Frame = +3
Query: 510 SGYKLFVGNLSYNVDSQQLAGLFQEAGEVNMVEVIYDRPTGRSRGFGFVTMATEEGCKTA 689
S KLFVGNL +NVDS QLA LF+ AG V MVEVIYD+ TGRSRGFGFVTM++ +TA
Sbjct: 92 SDLKLFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSSASEVQTA 151
Query: 690 FERFNGYELDGRALRVNSGPPPPKDFSSPRGSPRESYGGNRESXXXXXXXXXXXXXXYTD 869
++FNGYELDGR LRVN+GPPPPK S PR S+G +
Sbjct: 152 EQQFNGYELDGRPLRVNAGPPPPKREDSFSRGPRSSFGSSGGGYGGGGGGG-------AG 204
Query: 870 SENRIFVGNLPWSADDLSLQQLFNDYGTVLNTRVVTDRATGRSRGFGFVTMSSREEVEKA 1049
S NR++VGNL W DD++L+ LF + G V+ RV+ DR +GRS+GFGFVT +S +EV+ A
Sbjct: 205 SGNRVYVGNLSWGVDDMALESLFGEQGKVVEARVIYDRDSGRSKGFGFVTYNSAQEVQNA 264
Query: 1050 IANLNGTDLDGRQLRVDSAEARPPR 1124
I L+G DLDGRQ+RV AEARPPR
Sbjct: 265 IRTLDGADLDGRQIRVSEAEARPPR 289
>XP_006294745.1 hypothetical protein CARUB_v10023790mg [Capsella rubella] EOA27643.1
hypothetical protein CARUB_v10023790mg [Capsella rubella]
Length = 284
Score = 224 bits (571), Expect = 3e-66
Identities = 114/202 (56%), Positives = 140/202 (69%)
Frame = +3
Query: 519 KLFVGNLSYNVDSQQLAGLFQEAGEVNMVEVIYDRPTGRSRGFGFVTMATEEGCKTAFER 698
KLFVGNL +NVDS QLA LF+ AG V MVEVIYD+ TGRSRGFGFVTM++ + A ++
Sbjct: 91 KLFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSSASEVEAAAQQ 150
Query: 699 FNGYELDGRALRVNSGPPPPKDFSSPRGSPRESYGGNRESXXXXXXXXXXXXXXYTDSEN 878
FNGYELDGR LRVN+GPPPPK PR S+GG+ S N
Sbjct: 151 FNGYELDGRPLRVNAGPPPPKREDGFSRGPRSSFGGSGYGGGSG-----------AGSGN 199
Query: 879 RIFVGNLPWSADDLSLQQLFNDYGTVLNTRVVTDRATGRSRGFGFVTMSSREEVEKAIAN 1058
R++VGNL W DD++L+ LF + G V+ RV+ DR +GRS+GFGFVT +S +EV+ AI +
Sbjct: 200 RVYVGNLSWGVDDMALESLFAEQGKVVEARVIYDRDSGRSKGFGFVTYNSSQEVQNAINS 259
Query: 1059 LNGTDLDGRQLRVDSAEARPPR 1124
LNG DLDGRQ+RV AEARPPR
Sbjct: 260 LNGADLDGRQIRVSEAEARPPR 281
Score = 80.9 bits (198), Expect = 3e-13
Identities = 41/88 (46%), Positives = 55/88 (62%), Gaps = 2/88 (2%)
Frame = +3
Query: 510 SGYKLFVGNLSYNVDSQQLAGLFQEAGEVNMVEVIYDRPTGRSRGFGFVTMATEEGCKTA 689
SG +++VGNLS+ VD L LF E G+V VIYDR +GRS+GFGFVT + + + A
Sbjct: 197 SGNRVYVGNLSWGVDDMALESLFAEQGKVVEARVIYDRDSGRSKGFGFVTYNSSQEVQNA 256
Query: 690 FERFNGYELDGRALRVNSGP--PPPKDF 767
NG +LDGR +RV+ PP + F
Sbjct: 257 INSLNGADLDGRQIRVSEAEARPPRRQF 284