BLASTX nr result
ID: Ephedra28_contig00030684
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra28_contig00030684
(519 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ADN33807.1| ty1-copia retrotransposon protein [Cucumis melo s... 182 3e-44
gb|AAR13298.1| gag-pol polyprotein [Phaseolus vulgaris] 150 2e-34
gb|ABF95851.1| retrotransposon protein, putative, Ty1-copia subc... 145 4e-33
emb|CAN66637.1| hypothetical protein VITISV_011340 [Vitis vinifera] 142 5e-32
gb|AAG03096.2|AC073405_12 putative polyprotein [Oryza sativa Jap... 141 1e-31
emb|CAD40198.2| OSJNBb0043H09.7 [Oryza sativa Japonica Group] 140 2e-31
gb|AAX95047.1| retrotransposon protein, putative, Ty1-copia sub-... 139 4e-31
ref|XP_003631792.1| PREDICTED: uncharacterized protein LOC100252... 139 4e-31
gb|ABG22406.1| retrotransposon protein, putative, Ty1-copia subc... 139 4e-31
gb|ABA99473.2| retrotransposon protein, putative, Ty1-copia subc... 139 4e-31
gb|ABF96953.1| retrotransposon protein, putative, Ty1-copia subc... 139 4e-31
gb|AAS01934.1| putative Integrase core domain containing protein... 139 4e-31
gb|ABA93525.1| retrotransposon protein, putative, Ty1-copia subc... 139 5e-31
gb|ABA94191.1| retrotransposon protein, putative, Ty1-copia subc... 139 5e-31
gb|ABA98024.2| retrotransposon protein, putative, Ty1-copia subc... 139 5e-31
emb|CAE04792.1| OSJNBb0018J12.5 [Oryza sativa Japonica Group] 139 5e-31
gb|ABA91445.2| retrotransposon protein, putative, Ty1-copia subc... 138 7e-31
gb|ABF97537.1| retrotransposon protein, putative, Ty1-copia subc... 138 7e-31
gb|AAR87214.1| retrotransposon protein, putative, Ty1-copia sub-... 138 7e-31
gb|AAN61480.1| Putative polyprotein from transposon TNT [Oryza s... 138 9e-31
>gb|ADN33807.1| ty1-copia retrotransposon protein [Cucumis melo subsp. melo]
Length = 1038
Score = 182 bits (463), Expect = 3e-44
Identities = 91/179 (50%), Positives = 126/179 (70%), Gaps = 7/179 (3%)
Frame = +2
Query: 2 LNRVPHKKLDKTPYELWKGYAPNLKYLKVWGCLAKVGLPSFKRSNIGPKTVDCVFVGYAQ 181
LNR+PHK+LDKTPYELWKG+APNL YLKVWGCLAKV LP+ K++ +GPKT DC+F+ YAQ
Sbjct: 664 LNRIPHKRLDKTPYELWKGHAPNLSYLKVWGCLAKVPLPALKKTTVGPKTFDCIFIEYAQ 723
Query: 182 NSAAYRFMEISDRSICEARDAVFFEHIFPSKKNEASYGVSTFM-------PASSSTSLPV 340
NSAAYRFM ++D++I E+RD FFEH+FP K++ + +S M S ++
Sbjct: 724 NSAAYRFMCLNDKTINESRDVEFFEHVFPLKQSLYAPSLSNRMHDPEIVSETPVSETVDT 783
Query: 341 PTTASEIPEIRKSKRHKTATSFGSDFISYLVELDDFDELCEPIVYAYMIEENPKTYEEA 517
P + E+ E ++SKR +T SFG DF+S + ++ DE+ +I+E+PKTY+EA
Sbjct: 784 PNLSCEL-EPKRSKRQRTEKSFGPDFLSTFI-VERRDEIDCNFTNLLLIDEDPKTYQEA 840
>gb|AAR13298.1| gag-pol polyprotein [Phaseolus vulgaris]
Length = 1290
Score = 150 bits (379), Expect = 2e-34
Identities = 76/152 (50%), Positives = 102/152 (67%), Gaps = 6/152 (3%)
Frame = +2
Query: 5 NRVPHKKLDKTPYELWKGYAPNLKYLKVWGCLAKVGLPSFKRSNIGPKTVDCVFVGYAQN 184
NR+PH+K KTPYELWKGY PNLKYL+VWG LAKV LP K+ IG KT DC+F+GYA++
Sbjct: 630 NRIPHRKTGKTPYELWKGYQPNLKYLRVWGSLAKVMLPDPKKRKIGSKTSDCMFLGYAEH 689
Query: 185 SAAYRFMEISD-----RSICEARDAVFFEHIFPSKKNEASYGVSTFMPASSSTSLPVPTT 349
SAAYRF+ ++ +I E ++A FFEHIFP K +S ++ P+ +
Sbjct: 690 SAAYRFLVLNSDIIERNTIVETKNAEFFEHIFPLK-------------SSGTSEQPIDSV 736
Query: 350 ASEIPE-IRKSKRHKTATSFGSDFISYLVELD 442
+ + E +R+SKR + TSFG+DF +YLVE D
Sbjct: 737 SDTLSEDVRRSKRQRKETSFGNDFYTYLVEND 768
>gb|ABF95851.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1075
Score = 145 bits (367), Expect = 4e-33
Identities = 75/152 (49%), Positives = 95/152 (62%), Gaps = 7/152 (4%)
Frame = +2
Query: 2 LNRVPHKKLDKTPYELWKGYAPNLKYLKVWGCLAKVGLPSFKRSNIGPKTVDCVFVGYAQ 181
LNRVP K + TPYELWKG PNL +LKVWGCLAKV +P K+ +GPKTVDCVF+GYAQ
Sbjct: 533 LNRVPAKGTEVTPYELWKGRKPNLNFLKVWGCLAKVNIPVVKKRKLGPKTVDCVFIGYAQ 592
Query: 182 NSAAYRFM-------EISDRSICEARDAVFFEHIFPSKKNEASYGVSTFMPASSSTSLPV 340
NS AYRF+ E+ + ++ E+RD FFE FP K S + P S +S
Sbjct: 593 NSLAYRFLVVKSETTEVRENTVMESRDTTFFEDTFPLKVKSPSSEPISVEPRISISS--- 649
Query: 341 PTTASEIPEIRKSKRHKTATSFGSDFISYLVE 436
+ +R+SKR +T +FG DFI YLV+
Sbjct: 650 ----DDSLNLRRSKRSRTEKTFGDDFIIYLVD 677
>emb|CAN66637.1| hypothetical protein VITISV_011340 [Vitis vinifera]
Length = 1316
Score = 142 bits (358), Expect = 5e-32
Identities = 73/153 (47%), Positives = 98/153 (64%), Gaps = 8/153 (5%)
Frame = +2
Query: 2 LNRVPHKKLDKTPYELWKGYAPNLKYLKVWGCLAKVGLPSFKRSNIGPKTVDCVFVGYAQ 181
LN+VP KK +KTPYELWKG P+ YL++WGCLAKV +P K+ IGPKT+DC+F+GYA
Sbjct: 667 LNKVPKKKAEKTPYELWKGRKPSYTYLRMWGCLAKVAVPPPKKVKIGPKTIDCIFIGYAH 726
Query: 182 NSAAYRFM-------EISDRSICEARDAVFFEHIFPSKKNEASYGVSTFMPASSSTSLPV 340
NS AYRF+ +I +I E+R+A FFE +FP K E P+SS L
Sbjct: 727 NSNAYRFLVYESNIPDIHKNTIMESRNASFFEDVFPCKSKEE--------PSSSKRMLES 778
Query: 341 PTTASEIP-EIRKSKRHKTATSFGSDFISYLVE 436
E+ E R+SKR +T SFG DF+++++E
Sbjct: 779 QDQNEEVEVEPRRSKRVRTEKSFGPDFLTFMLE 811
>gb|AAG03096.2|AC073405_12 putative polyprotein [Oryza sativa Japonica Group]
gi|57863849|gb|AAW56890.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 1274
Score = 141 bits (355), Expect = 1e-31
Identities = 79/161 (49%), Positives = 101/161 (62%), Gaps = 16/161 (9%)
Frame = +2
Query: 2 LNRVPHKKLDKTPYELWKGYAPNLKYLKVWGCLAKVGLPSFKRSNIGPKTVDCVFVGYAQ 181
LNRVP++ DKTPYE+W G P+L YL+ WGCLAKV +P K+ +GPKTVDCVF+GYA
Sbjct: 630 LNRVPNRNKDKTPYEIWIGRKPSLSYLRTWGCLAKVNVPITKKRKLGPKTVDCVFLGYAH 689
Query: 182 NSAAYRFM----EISDR---SICEARDAVFFEHIFPSK-KNEASYGVSTFMPAS------ 319
+S AYRF+ E+SD +I E+RDA+FFE FP K + S S +P+S
Sbjct: 690 HSIAYRFLVVKSEVSDMHVGTIMESRDAIFFESFFPMKDTHSGSNQPSEIIPSSITPPEQ 749
Query: 320 --SSTSLPVPTTASEIPEIRKSKRHKTATSFGSDFISYLVE 436
+ L SE P R+SKR +TA SFG DF YLV+
Sbjct: 750 TEHTHELVSEEDVSEAP--RRSKRQRTAKSFGDDFTVYLVD 788
>emb|CAD40198.2| OSJNBb0043H09.7 [Oryza sativa Japonica Group]
Length = 1302
Score = 140 bits (352), Expect = 2e-31
Identities = 79/161 (49%), Positives = 100/161 (62%), Gaps = 16/161 (9%)
Frame = +2
Query: 2 LNRVPHKKLDKTPYELWKGYAPNLKYLKVWGCLAKVGLPSFKRSNIGPKTVDCVFVGYAQ 181
LNRVP++ DKTPYE+W G P+L YL+ WGCLAKV +P K+ +GPKTVDCVF+GYA
Sbjct: 630 LNRVPNRNKDKTPYEIWIGRKPSLSYLRTWGCLAKVNVPITKKRKLGPKTVDCVFLGYAH 689
Query: 182 NSAAYRFM----EISDR---SICEARDAVFFEHIFPSK-KNEASYGVSTFMPASSSTSLP 337
+S AYRF+ E+ D +I E+RDA FFE FP K + S S +P+S + S
Sbjct: 690 HSIAYRFLIVKSEVPDMHVGTIMESRDATFFESFFPMKDTHSGSNQPSEIIPSSITPSEQ 749
Query: 338 VPTT--------ASEIPEIRKSKRHKTATSFGSDFISYLVE 436
T SE P R+SKR +TA SFG DF YLV+
Sbjct: 750 TEHTHELVSEEDVSEAP--RRSKRQRTAKSFGDDFTVYLVD 788
>gb|AAX95047.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
sativa Japonica Group]
Length = 2266
Score = 139 bits (350), Expect = 4e-31
Identities = 73/159 (45%), Positives = 95/159 (59%), Gaps = 14/159 (8%)
Frame = +2
Query: 2 LNRVPHKKLDKTPYELWKGYAPNLKYLKVWGCLAKVGLPSFKRSNIGPKTVDCVFVGYAQ 181
LNRVP++ DKTPYE+W G P+L YL+ WGCLAKV +P K+ +GPKTVDCVF+GYA
Sbjct: 208 LNRVPNRNKDKTPYEIWIGRKPSLSYLRTWGCLAKVNVPIRKKRKLGPKTVDCVFLGYAH 267
Query: 182 NSAAYRFMEISDR-------SICEARDAVFFEHIFPSKKNEASYG------VSTFMPASS 322
+S AYRF+ + +I E+RDA FFE FP K +S S+ P
Sbjct: 268 HSIAYRFLIVKSEVLDMHVGTIMESRDATFFESFFPMKDTHSSSSQPSEVIPSSITPPEQ 327
Query: 323 STSLPVPTTASEIPEI-RKSKRHKTATSFGSDFISYLVE 436
+ T ++ E R+SKR +TA SFG DF YLV+
Sbjct: 328 TKHTHEHVTEEDVSEAPRRSKRQRTAKSFGDDFTVYLVD 366
>ref|XP_003631792.1| PREDICTED: uncharacterized protein LOC100252656 [Vitis vinifera]
Length = 946
Score = 139 bits (350), Expect = 4e-31
Identities = 72/153 (47%), Positives = 97/153 (63%), Gaps = 8/153 (5%)
Frame = +2
Query: 2 LNRVPHKKLDKTPYELWKGYAPNLKYLKVWGCLAKVGLPSFKRSNIGPKTVDCVFVGYAQ 181
LN+VP KK +KTPYELWKG P+ YL++WGCLAKV + K+ IGPKT+DC+F+GYA
Sbjct: 569 LNKVPKKKAEKTPYELWKGRKPSYTYLRMWGCLAKVAVSPPKKVKIGPKTIDCIFIGYAH 628
Query: 182 NSAAYRFM-------EISDRSICEARDAVFFEHIFPSKKNEASYGVSTFMPASSSTSLPV 340
NS AYRF+ +I +I E+R+A FFE +FP K E P+SS L
Sbjct: 629 NSNAYRFLVYESNIPDIHKNTIMESRNASFFEDVFPCKSKEE--------PSSSKRMLKS 680
Query: 341 PTTASEIP-EIRKSKRHKTATSFGSDFISYLVE 436
E+ E R+SKR +T SFG DF+++++E
Sbjct: 681 QDQNEEVEVEPRRSKRVRTEKSFGPDFLNFMLE 713
>gb|ABG22406.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 2188
Score = 139 bits (350), Expect = 4e-31
Identities = 73/159 (45%), Positives = 95/159 (59%), Gaps = 14/159 (8%)
Frame = +2
Query: 2 LNRVPHKKLDKTPYELWKGYAPNLKYLKVWGCLAKVGLPSFKRSNIGPKTVDCVFVGYAQ 181
LNRVP++ DKTPYE+W G P+L YL+ WGCLAKV +P K+ +GPKTVDCVF+GYA
Sbjct: 130 LNRVPNRNKDKTPYEIWIGRKPSLSYLRTWGCLAKVNVPIRKKRKLGPKTVDCVFLGYAH 189
Query: 182 NSAAYRFMEISDR-------SICEARDAVFFEHIFPSKKNEASYG------VSTFMPASS 322
+S AYRF+ + +I E+RDA FFE FP K +S S+ P
Sbjct: 190 HSIAYRFLIVKSEVLDMHVGTIMESRDATFFESFFPMKDTHSSSSQPSEVIPSSITPPEQ 249
Query: 323 STSLPVPTTASEIPEI-RKSKRHKTATSFGSDFISYLVE 436
+ T ++ E R+SKR +TA SFG DF YLV+
Sbjct: 250 TKHTHEHVTEEDVSEAPRRSKRQRTAKSFGDDFTVYLVD 288
>gb|ABA99473.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1287
Score = 139 bits (350), Expect = 4e-31
Identities = 78/161 (48%), Positives = 100/161 (62%), Gaps = 16/161 (9%)
Frame = +2
Query: 2 LNRVPHKKLDKTPYELWKGYAPNLKYLKVWGCLAKVGLPSFKRSNIGPKTVDCVFVGYAQ 181
LNRVP++ DKTPYE+W G P+L YL+ WGCLAKV +P K+ +GPKTVDCVF+GYA
Sbjct: 591 LNRVPNRNKDKTPYEIWIGRKPSLSYLRTWGCLAKVNVPITKKRKLGPKTVDCVFLGYAH 650
Query: 182 NSAAYRFM----EISDR---SICEARDAVFFEHIFPSK-KNEASYGVSTFMPAS------ 319
+S AYRF+ E+ D +I E+RDA+FFE FP K + S S +P+S
Sbjct: 651 HSIAYRFLIVKSEVPDMHVGTIMESRDAIFFESFFPMKDTHSGSNQPSEIIPSSITPPEQ 710
Query: 320 --SSTSLPVPTTASEIPEIRKSKRHKTATSFGSDFISYLVE 436
+ L SE P R+SKR +TA SFG DF YLV+
Sbjct: 711 TEHTHELVSEEDVSEAP--RRSKRQRTAKSFGDDFTVYLVD 749
>gb|ABF96953.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1197
Score = 139 bits (350), Expect = 4e-31
Identities = 79/161 (49%), Positives = 99/161 (61%), Gaps = 16/161 (9%)
Frame = +2
Query: 2 LNRVPHKKLDKTPYELWKGYAPNLKYLKVWGCLAKVGLPSFKRSNIGPKTVDCVFVGYAQ 181
LNRVP++ DKTPYE+W G P+L YL+ WGCLAKV +P K+ +GPKTVDCVF+GYA
Sbjct: 525 LNRVPNRNKDKTPYEIWIGRKPSLSYLRTWGCLAKVNVPITKKRKLGPKTVDCVFLGYAH 584
Query: 182 NSAAYRFM----EISDR---SICEARDAVFFEHIFPSK-KNEASYGVSTFMPAS------ 319
+S AYRF+ E+ D +I E+RDA FFE FP K + S S +P+S
Sbjct: 585 HSIAYRFLIVKSEVPDMHVGTIMESRDATFFESFFPMKDTHSGSNQPSEIIPSSITPPEQ 644
Query: 320 --SSTSLPVPTTASEIPEIRKSKRHKTATSFGSDFISYLVE 436
+ L SE P RKSKR +TA SFG DF YLV+
Sbjct: 645 TEHTHELVSEEDVSEAP--RKSKRQRTAKSFGDDFTVYLVD 683
>gb|AAS01934.1| putative Integrase core domain containing protein [Oryza sativa
Japonica Group]
Length = 1180
Score = 139 bits (350), Expect = 4e-31
Identities = 79/161 (49%), Positives = 99/161 (61%), Gaps = 16/161 (9%)
Frame = +2
Query: 2 LNRVPHKKLDKTPYELWKGYAPNLKYLKVWGCLAKVGLPSFKRSNIGPKTVDCVFVGYAQ 181
LNRVP++ DKTPYE+W G P+L YL+ WGCLAKV +P K+ +GPKTVDCVF+GYA
Sbjct: 508 LNRVPNRNKDKTPYEIWIGRKPSLSYLRTWGCLAKVNVPITKKRKLGPKTVDCVFLGYAH 567
Query: 182 NSAAYRFM----EISDR---SICEARDAVFFEHIFPSK-KNEASYGVSTFMPAS------ 319
+S AYRF+ E+ D +I E+RDA FFE FP K + S S +P+S
Sbjct: 568 HSIAYRFLIVKSEVPDMHVGTIMESRDATFFESFFPMKDTHSGSNQPSEIIPSSITPPEQ 627
Query: 320 --SSTSLPVPTTASEIPEIRKSKRHKTATSFGSDFISYLVE 436
+ L SE P RKSKR +TA SFG DF YLV+
Sbjct: 628 TEHTHELVSEEDVSEAP--RKSKRQRTAKSFGDDFTVYLVD 666
>gb|ABA93525.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1235
Score = 139 bits (349), Expect = 5e-31
Identities = 79/161 (49%), Positives = 99/161 (61%), Gaps = 16/161 (9%)
Frame = +2
Query: 2 LNRVPHKKLDKTPYELWKGYAPNLKYLKVWGCLAKVGLPSFKRSNIGPKTVDCVFVGYAQ 181
LNRVP++ DKTPYE+W G P+L YL+ WGCLAKV +P K+ +GPKTVDCVF+GYA
Sbjct: 563 LNRVPNRNKDKTPYEIWIGRKPSLSYLRTWGCLAKVNVPITKKRKLGPKTVDCVFLGYAY 622
Query: 182 NSAAYRFM----EISDR---SICEARDAVFFEHIFPSK-KNEASYGVSTFMPAS------ 319
+S AYRF+ E+ D +I E+RDA FFE FP K + S S +P+S
Sbjct: 623 HSIAYRFLIVKSEVPDMHVGTIMESRDATFFESFFPMKDTHSGSNQPSEIIPSSITPPEQ 682
Query: 320 --SSTSLPVPTTASEIPEIRKSKRHKTATSFGSDFISYLVE 436
+ L SE P R+SKR KTA SFG DF YLV+
Sbjct: 683 TKHTHELVSEEDVSEAP--RRSKRQKTAKSFGDDFTVYLVD 721
>gb|ABA94191.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1060
Score = 139 bits (349), Expect = 5e-31
Identities = 78/161 (48%), Positives = 100/161 (62%), Gaps = 16/161 (9%)
Frame = +2
Query: 2 LNRVPHKKLDKTPYELWKGYAPNLKYLKVWGCLAKVGLPSFKRSNIGPKTVDCVFVGYAQ 181
LNRVP++ DKTPYE+W G P+L YL+ WGCLAKV +P K+ +GPKTVDCVF+GYA
Sbjct: 498 LNRVPNRNKDKTPYEIWIGRKPSLSYLRTWGCLAKVNVPITKKRKLGPKTVDCVFLGYAY 557
Query: 182 NSAAYRFM----EISDR---SICEARDAVFFEHIFPSK-KNEASYGVSTFMPAS------ 319
+S AYRF+ E+ D +I E+RDA+FFE FP K + S S +P+S
Sbjct: 558 HSIAYRFLIVKSEVPDMNVGTIMESRDAIFFESFFPMKDTHSGSNQPSEIIPSSITPPEQ 617
Query: 320 --SSTSLPVPTTASEIPEIRKSKRHKTATSFGSDFISYLVE 436
+ L SE P R+SKR +TA SFG DF YLV+
Sbjct: 618 TEHTHELVSEEDVSEAP--RRSKRQRTAKSFGDDFTVYLVD 656
>gb|ABA98024.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 727
Score = 139 bits (349), Expect = 5e-31
Identities = 76/159 (47%), Positives = 99/159 (62%), Gaps = 14/159 (8%)
Frame = +2
Query: 2 LNRVPHKKLDKTPYELWKGYAPNLKYLKVWGCLAKVGLPSFKRSNIGPKTVDCVFVGYAQ 181
LNRVP++ DKTPYE+W G P+L YL+ WGCLAKV +P K+ +GPKTVDCVF+GYA
Sbjct: 286 LNRVPNRNKDKTPYEIWIGRKPSLSYLRTWGCLAKVNVPITKKRKLGPKTVDCVFLGYAY 345
Query: 182 NSAAYRFM----EISDR---SICEARDAVFFEHIFPSK-KNEASYGVSTFMPASSSTSLP 337
+S AYRF+ E+ D +I E+RDA FFE FP K + +S S +P+S +
Sbjct: 346 HSIAYRFLIVKSEVPDMHVGTIMESRDATFFESFFPMKDTHNSSSQPSEIIPSSITPPEQ 405
Query: 338 VPTTASEIPE------IRKSKRHKTATSFGSDFISYLVE 436
T + E R+SKR +TA SFG DF YLV+
Sbjct: 406 TEHTNEHVTEQDNSEAPRRSKRQRTAKSFGDDFTVYLVD 444
>emb|CAE04792.1| OSJNBb0018J12.5 [Oryza sativa Japonica Group]
Length = 1320
Score = 139 bits (349), Expect = 5e-31
Identities = 76/161 (47%), Positives = 98/161 (60%), Gaps = 16/161 (9%)
Frame = +2
Query: 2 LNRVPHKKLDKTPYELWKGYAPNLKYLKVWGCLAKVGLPSFKRSNIGPKTVDCVFVGYAQ 181
LNRVP++ DKTPYE+W G P+L YL++WGCLAKV +P K+ +GPKTVDCVF+GYA
Sbjct: 630 LNRVPNRNKDKTPYEIWIGRKPSLSYLRIWGCLAKVNVPITKKRKLGPKTVDCVFLGYAH 689
Query: 182 NSAAYRFMEISDR-------SICEARDAVFFEHIFPSK-KNEASYGVSTFMPAS------ 319
+S AYRF+ + +I E+RDA FFE FP K + S S +P+S
Sbjct: 690 HSIAYRFLIVKSEVLDMHVGTIIESRDATFFESFFPMKDTHSGSNQPSEIIPSSITPPEQ 749
Query: 320 --SSTSLPVPTTASEIPEIRKSKRHKTATSFGSDFISYLVE 436
+ L SE P R+SKR +TA SFG DF YLV+
Sbjct: 750 TEHTHELVSEEDVSEAP--RRSKRQRTAKSFGDDFTVYLVD 788
>gb|ABA91445.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1320
Score = 138 bits (348), Expect = 7e-31
Identities = 78/161 (48%), Positives = 98/161 (60%), Gaps = 16/161 (9%)
Frame = +2
Query: 2 LNRVPHKKLDKTPYELWKGYAPNLKYLKVWGCLAKVGLPSFKRSNIGPKTVDCVFVGYAQ 181
LNRVP++ DKTPYE+W G P+L YL+ WGCL KV +P K+ +GPKTVDCVF+GYA
Sbjct: 630 LNRVPNRNKDKTPYEIWIGRKPSLSYLRTWGCLVKVNVPITKKRKLGPKTVDCVFLGYAH 689
Query: 182 NSAAYRFM----EISDR---SICEARDAVFFEHIFPSK-KNEASYGVSTFMPAS------ 319
+S AYRF+ E+ D +I E+RDA FFE FP K N S S +P+S
Sbjct: 690 HSIAYRFLIVKSEVPDMHVGTIMESRDATFFESFFPMKDTNSGSNQPSEIIPSSITPPEQ 749
Query: 320 --SSTSLPVPTTASEIPEIRKSKRHKTATSFGSDFISYLVE 436
+ L SE P R+SKR +TA SFG DF YLV+
Sbjct: 750 TEHTHELVSEEDVSEAP--RRSKRQRTAKSFGDDFTVYLVD 788
>gb|ABF97537.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1397
Score = 138 bits (348), Expect = 7e-31
Identities = 78/161 (48%), Positives = 99/161 (61%), Gaps = 16/161 (9%)
Frame = +2
Query: 2 LNRVPHKKLDKTPYELWKGYAPNLKYLKVWGCLAKVGLPSFKRSNIGPKTVDCVFVGYAQ 181
LNRVP++ DKTPYE+W G P+L YL+ WGCLAKV +P K+ +GPKTVDCVF+GYA
Sbjct: 707 LNRVPNRNKDKTPYEIWIGRKPSLSYLRTWGCLAKVNVPITKKRKLGPKTVDCVFLGYAH 766
Query: 182 NSAAYRFM----EISDR---SICEARDAVFFEHIFPSK-KNEASYGVSTFMPAS------ 319
+S AYRF+ E+ D +I E+RDA FFE FP K + S S +P+S
Sbjct: 767 HSIAYRFLIVKSEVPDMHVGTIMESRDATFFERFFPMKDTHSGSNQPSEIIPSSITPPEQ 826
Query: 320 --SSTSLPVPTTASEIPEIRKSKRHKTATSFGSDFISYLVE 436
+ L SE P R+SKR +TA SFG DF YLV+
Sbjct: 827 TEHTHELVSEEDVSEAP--RRSKRQRTAKSFGDDFTVYLVD 865
>gb|AAR87214.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
Japonica Group]
Length = 1393
Score = 138 bits (348), Expect = 7e-31
Identities = 78/161 (48%), Positives = 99/161 (61%), Gaps = 16/161 (9%)
Frame = +2
Query: 2 LNRVPHKKLDKTPYELWKGYAPNLKYLKVWGCLAKVGLPSFKRSNIGPKTVDCVFVGYAQ 181
LNRVP++ DKTPYE+W G P+L YL+ WGCLAKV +P K+ +GPKTVDCVF+GYA
Sbjct: 707 LNRVPNRNKDKTPYEIWIGRKPSLSYLRTWGCLAKVNVPITKKRKLGPKTVDCVFLGYAH 766
Query: 182 NSAAYRFM----EISDR---SICEARDAVFFEHIFPSK-KNEASYGVSTFMPAS------ 319
+S AYRF+ E+ D +I E+RDA FFE FP K + S S +P+S
Sbjct: 767 HSIAYRFLIVKSEVPDMHVGTIMESRDATFFERFFPMKDTHSGSNQPSEIIPSSITPPEQ 826
Query: 320 --SSTSLPVPTTASEIPEIRKSKRHKTATSFGSDFISYLVE 436
+ L SE P R+SKR +TA SFG DF YLV+
Sbjct: 827 TEHTHELVSEEDVSEAP--RRSKRQRTAKSFGDDFTVYLVD 865
>gb|AAN61480.1| Putative polyprotein from transposon TNT [Oryza sativa Japonica
Group]
Length = 1911
Score = 138 bits (347), Expect = 9e-31
Identities = 78/161 (48%), Positives = 99/161 (61%), Gaps = 16/161 (9%)
Frame = +2
Query: 2 LNRVPHKKLDKTPYELWKGYAPNLKYLKVWGCLAKVGLPSFKRSNIGPKTVDCVFVGYAQ 181
LNRVP++ DKTPYE+W G P+L YL+ WGCLAKV +P K+ +GPKTVDCVF+GYA
Sbjct: 630 LNRVPNRNKDKTPYEIWIGRKPSLSYLRTWGCLAKVNVPITKKRKLGPKTVDCVFLGYAH 689
Query: 182 NSAAYRFM----EISDR---SICEARDAVFFEHIFPSK-KNEASYGVSTFMPAS------ 319
+S AYRF+ E+ D +I E+RDA FFE FP K + S S +P+S
Sbjct: 690 HSIAYRFLIVKSEVPDMHVGTIMESRDATFFESFFPMKDTHSGSNQPSEIIPSSITPPEQ 749
Query: 320 --SSTSLPVPTTASEIPEIRKSKRHKTATSFGSDFISYLVE 436
+ L SE P R+SKR +TA SFG DF YLV+
Sbjct: 750 TEHTHELVSEEDVSEAP--RRSKRQRTAKSFGDDFTVYLVD 788