BLASTX nr result

ID: Ephedra28_contig00030616 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00030616
         (441 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EXB92318.1| ATP-dependent RNA helicase dhx8 [Morus notabilis]       57   3e-06
emb|CAN68787.1| hypothetical protein VITISV_039016 [Vitis vinifera]    57   3e-06
emb|CAN62377.1| hypothetical protein VITISV_020017 [Vitis vinifera]    56   4e-06
emb|CAN78358.1| hypothetical protein VITISV_033648 [Vitis vinifera]    55   7e-06
emb|CAN66902.1| hypothetical protein VITISV_005876 [Vitis vinifera]    55   1e-05

>gb|EXB92318.1| ATP-dependent RNA helicase dhx8 [Morus notabilis]
          Length = 941

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 26/64 (40%), Positives = 40/64 (62%)
 Frame = -2

Query: 221 ERQTLRQYLQSEVGGPPSCIVTH*LIHQLDIKPNMISMLNNFYGMDSEDPFNHI*EFESI 42
           +++TL  YL       PSCI+    +  LD  P MI +L  F+G++SE+P+ HI EFE +
Sbjct: 616 QQKTLNDYLHPTRTATPSCIMFPPNMPNLDFNPGMIQLLPTFHGLESENPYVHIREFEEV 675

Query: 41  ISTF 30
           ++TF
Sbjct: 676 VATF 679


>emb|CAN68787.1| hypothetical protein VITISV_039016 [Vitis vinifera]
          Length = 2029

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 25/49 (51%), Positives = 38/49 (77%)
 Frame = -2

Query: 173 PSCIVTH*LIHQLDIKPNMISMLNNFYGMDSEDPFNHI*EFESIISTFK 27
           PSCIV H  + QL I+P+++ +L NF+GM+SE+P+ HI EFE + +TF+
Sbjct: 202 PSCIVPH--LEQLIIRPHIVPLLPNFHGMESENPYAHIKEFEEVCNTFR 248


>emb|CAN62377.1| hypothetical protein VITISV_020017 [Vitis vinifera]
          Length = 1401

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 27/62 (43%), Positives = 41/62 (66%)
 Frame = -2

Query: 212 TLRQYLQSEVGGPPSCIVTH*LIHQLDIKPNMISMLNNFYGMDSEDPFNHI*EFESIIST 33
           +LR  +       PSCIV H  + QL I+P+++ +L NF+GM SE+P+ HI EFE + +T
Sbjct: 99  SLRDRMHPPRMSAPSCIVPH--LEQLIIRPHIVPLLPNFHGMKSENPYAHIKEFEEVCNT 156

Query: 32  FK 27
           F+
Sbjct: 157 FR 158


>emb|CAN78358.1| hypothetical protein VITISV_033648 [Vitis vinifera]
          Length = 687

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 24/49 (48%), Positives = 37/49 (75%)
 Frame = -2

Query: 173 PSCIVTH*LIHQLDIKPNMISMLNNFYGMDSEDPFNHI*EFESIISTFK 27
           PSCI  H  + QL I+P+++ +L NF+GM+SE+P+ HI EFE + +TF+
Sbjct: 36  PSCIAPH--LEQLIIRPHIVPLLPNFHGMESENPYAHIKEFEEVCNTFR 82


>emb|CAN66902.1| hypothetical protein VITISV_005876 [Vitis vinifera]
          Length = 2051

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 28/67 (41%), Positives = 43/67 (64%)
 Frame = -2

Query: 227 LGERQTLRQYLQSEVGGPPSCIVTH*LIHQLDIKPNMISMLNNFYGMDSEDPFNHI*EFE 48
           L E +++R  +       PSCIV   LI QL I+P ++ +L  F+GM+SE+P+ HI EFE
Sbjct: 297 LNEFRSMRDRMHPPRMSAPSCIVP--LIEQLVIRPYLVPLLPTFHGMESENPYAHIKEFE 354

Query: 47  SIISTFK 27
            + +TF+
Sbjct: 355 DVCNTFQ 361


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