BLASTX nr result
ID: Ephedra28_contig00030601
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra28_contig00030601
(476 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003286510.1| DNA-dependent protein kinase subunit [Dictyo... 80 3e-13
ref|XP_001765725.1| predicted protein [Physcomitrella patens] gi... 79 5e-13
ref|XP_640856.2| DNA-dependent protein kinase subunit [Dictyost... 79 5e-13
ref|XP_004350354.1| DNA-dependent protein kinase subunit [Dictyo... 77 3e-12
gb|EFA79656.1| DNA-dependent protein kinase subunit [Polysphondy... 76 4e-12
ref|XP_002110143.1| hypothetical protein TRIADDRAFT_20924 [Trich... 76 4e-12
ref|XP_004342763.1| DNA-dependent protein kinase [Capsaspora owc... 75 9e-12
ref|XP_005152802.1| PREDICTED: DNA-dependent protein kinase cata... 75 1e-11
emb|CBN81785.1| DNA-dependent protein kinase catalytic subunit [... 75 1e-11
emb|CBN81784.1| DNA-dependent protein kinase catalytic subunit [... 75 1e-11
ref|XP_001626380.1| predicted protein [Nematostella vectensis] g... 74 2e-11
ref|XP_004615434.1| PREDICTED: DNA-dependent protein kinase cata... 74 2e-11
ref|XP_004431207.1| PREDICTED: DNA-dependent protein kinase cata... 74 2e-11
ref|XP_004431206.1| PREDICTED: DNA-dependent protein kinase cata... 74 2e-11
ref|NP_989989.1| DNA-dependent protein kinase catalytic subunit ... 74 2e-11
sp|Q8QGX4.1|PRKDC_CHICK RecName: Full=DNA-dependent protein kina... 74 2e-11
gb|AAL40980.1| DNA-dependent protein kinase catalytic subunit [E... 74 3e-11
ref|XP_003466052.2| PREDICTED: DNA-dependent protein kinase cata... 73 3e-11
ref|XP_004047035.1| PREDICTED: DNA-dependent protein kinase cata... 73 3e-11
gb|AAC50210.3| DNA dependent protein kinase catalytic subunit [H... 73 3e-11
>ref|XP_003286510.1| DNA-dependent protein kinase subunit [Dictyostelium purpureum]
gi|325083491|gb|EGC36942.1| DNA-dependent protein kinase
subunit [Dictyostelium purpureum]
Length = 4168
Score = 80.1 bits (196), Expect = 3e-13
Identities = 50/130 (38%), Positives = 68/130 (52%), Gaps = 3/130 (2%)
Frame = +2
Query: 8 VRKNLQFFWHSQ---LSENVMQRFLEIIHYIYDPEIEGCWPQITNVLLLKLCEDSVDFER 178
+ K L FW + LS N QR + +Y PE E W LLL+LC S DF +
Sbjct: 2598 INKKLLEFWDNNTKTLSSNSNQRLQQFFTIMYSPETESKWVGNNCCLLLQLCNRSSDFCK 2657
Query: 179 PIFDAPLSECEFHEYTINTSWLGGTLPMTPLFSETQGSNLEFQGTLDNQKSSDNKGSMNS 358
+FD PLSEC F E +++SW TL M PLFS +Q +D +++S N+ ++
Sbjct: 2658 VLFDKPLSECSFKEVQLDSSWQHRTLNMNPLFSSSQYG-------VDGEEASSNQMDIDE 2710
Query: 359 RHMIRATIAP 388
IRAT AP
Sbjct: 2711 ---IRATQAP 2717
>ref|XP_001765725.1| predicted protein [Physcomitrella patens] gi|162683151|gb|EDQ69564.1|
predicted protein [Physcomitrella patens]
Length = 4165
Score = 79.3 bits (194), Expect = 5e-13
Identities = 35/53 (66%), Positives = 45/53 (84%)
Frame = +2
Query: 50 ENVMQRFLEIIHYIYDPEIEGCWPQITNVLLLKLCEDSVDFERPIFDAPLSEC 208
++V RFLE+++ IYDP +E W QI+NVL+LKLCEDSVD++RPIF APLSEC
Sbjct: 2619 QDVRHRFLELVNRIYDPCLEENWAQISNVLILKLCEDSVDYKRPIFSAPLSEC 2671
>ref|XP_640856.2| DNA-dependent protein kinase subunit [Dictyostelium discoideum AX4]
gi|122086252|sp|Q54UC0.2|PRKDC_DICDI RecName:
Full=DNA-dependent protein kinase catalytic subunit;
Short=DNA-PK catalytic subunit; Short=DNA-PKcs
gi|90970659|gb|EAL66880.2| DNA-dependent protein kinase
subunit [Dictyostelium discoideum AX4]
Length = 4299
Score = 79.3 bits (194), Expect = 5e-13
Identities = 47/131 (35%), Positives = 66/131 (50%), Gaps = 3/131 (2%)
Frame = +2
Query: 8 VRKNLQFFWHSQ---LSENVMQRFLEIIHYIYDPEIEGCWPQITNVLLLKLCEDSVDFER 178
+ K L FW + LS + QR + +Y PE E W + LL +LC S DF +
Sbjct: 2695 INKKLLQFWDNNSKTLSASSNQRLQQFFDIMYSPETESKWVANSCCLLFQLCNRSSDFTK 2754
Query: 179 PIFDAPLSECEFHEYTINTSWLGGTLPMTPLFSETQGSNLEFQGTLDNQKSSDNKGSMNS 358
+FD PLSEC F E +++SW TL M PLFS +Q +D+ + ++ G
Sbjct: 2755 LLFDKPLSECTFKEVQVDSSWQHRTLNMNPLFSSSQYG-------IDDATTDESNGDSMQ 2807
Query: 359 RHMIRATIAPS 391
IRAT AP+
Sbjct: 2808 LDEIRATQAPN 2818
>ref|XP_004350354.1| DNA-dependent protein kinase subunit [Dictyostelium fasciculatum]
gi|328865264|gb|EGG13650.1| DNA-dependent protein kinase
subunit [Dictyostelium fasciculatum]
Length = 3111
Score = 76.6 bits (187), Expect = 3e-12
Identities = 39/109 (35%), Positives = 58/109 (53%), Gaps = 2/109 (1%)
Frame = +2
Query: 8 VRKNLQFFW--HSQLSENVMQRFLEIIHYIYDPEIEGCWPQITNVLLLKLCEDSVDFERP 181
++K + FW + QLS + R L+I +Y E E W + LL +LC S DF +
Sbjct: 1477 IKKKIMEFWDTNQQLSLSTSSRLLQIFEKMYSVETENQWLGYSCCLLFQLCSRSSDFSKL 1536
Query: 182 IFDAPLSECEFHEYTINTSWLGGTLPMTPLFSETQGSNLEFQGTLDNQK 328
+F+ PLSEC F EY +++SW T M PLFS +Q + +D +
Sbjct: 1537 VFEKPLSECTFKEYQLDSSWQSRTSNMNPLFSSSQDDSASQMMMMDTDQ 1585
>gb|EFA79656.1| DNA-dependent protein kinase subunit [Polysphondylium pallidum PN500]
Length = 4074
Score = 76.3 bits (186), Expect = 4e-12
Identities = 39/95 (41%), Positives = 55/95 (57%), Gaps = 2/95 (2%)
Frame = +2
Query: 8 VRKNLQFFWHS--QLSENVMQRFLEIIHYIYDPEIEGCWPQITNVLLLKLCEDSVDFERP 181
V++ L FW + +LS + +QR +++ +Y E E W LLL+LC S DF +
Sbjct: 2508 VKRKLLEFWDTSKELSLSTVQRLMQLFEKMYTKETESQWLGYCCSLLLQLCTRSSDFTKL 2567
Query: 182 IFDAPLSECEFHEYTINTSWLGGTLPMTPLFSETQ 286
+FD PLSEC F EY ++ SW T M PLFS +Q
Sbjct: 2568 LFDKPLSECTFREYNLDASWQNRTSNMNPLFSSSQ 2602
>ref|XP_002110143.1| hypothetical protein TRIADDRAFT_20924 [Trichoplax adhaerens]
gi|190588267|gb|EDV28309.1| hypothetical protein
TRIADDRAFT_20924, partial [Trichoplax adhaerens]
Length = 4042
Score = 76.3 bits (186), Expect = 4e-12
Identities = 49/143 (34%), Positives = 75/143 (52%), Gaps = 2/143 (1%)
Frame = +2
Query: 11 RKNLQFFW--HSQLSENVMQRFLEIIHYIYDPEIEGCWPQITNVLLLKLCEDSVDFERPI 184
R L FW +++L ++R +++ +Y P E + + L+L+L S D++ I
Sbjct: 2439 RLQLINFWSNNNRLPSGTLERLSSVLYALYSPNAESEFLSYSTNLILELTSRSPDYKLSI 2498
Query: 185 FDAPLSECEFHEYTINTSWLGGTLPMTPLFSETQGSNLEFQGTLDNQKSSDNKGSMNSRH 364
FD PLSEC+FH+Y +N SW MTPLF+ TQ L QG++ + S + S H
Sbjct: 2499 FDRPLSECKFHDYNVNYSWQYRHAMMTPLFAATQ---LGSQGSMASFSLSGS--SSTDEH 2553
Query: 365 MIRATIAPSPSPSMIDYQSSNLQ 433
++RAT QS+NLQ
Sbjct: 2554 LLRAT------------QSTNLQ 2564
>ref|XP_004342763.1| DNA-dependent protein kinase [Capsaspora owczarzaki ATCC 30864]
gi|320166131|gb|EFW43030.1| DNA-dependent protein kinase
[Capsaspora owczarzaki ATCC 30864]
Length = 4925
Score = 75.1 bits (183), Expect = 9e-12
Identities = 43/126 (34%), Positives = 65/126 (51%), Gaps = 2/126 (1%)
Frame = +2
Query: 8 VRKNLQFFWHS--QLSENVMQRFLEIIHYIYDPEIEGCWPQITNVLLLKLCEDSVDFERP 181
+R LQ FWH+ +LS N +QR I ++Y PE E + L+L+L + D++ P
Sbjct: 3053 IRVLLQGFWHNPNRLSHNTLQRLRGIFDFMYTPEAEARFINNGANLMLELARLARDYDEP 3112
Query: 182 IFDAPLSECEFHEYTINTSWLGGTLPMTPLFSETQGSNLEFQGTLDNQKSSDNKGSMNSR 361
+FD PL+EC F EY I+ +W +PM+ + TQ F L + S + G
Sbjct: 3113 LFDLPLAECPFEEYPIDAAWHRRHIPMSMAYGMTQ-----FASQLQQSQQSGSDGDARPV 3167
Query: 362 HMIRAT 379
+RAT
Sbjct: 3168 GFLRAT 3173
>ref|XP_005152802.1| PREDICTED: DNA-dependent protein kinase catalytic subunit
[Melopsittacus undulatus]
Length = 4105
Score = 74.7 bits (182), Expect = 1e-11
Identities = 39/119 (32%), Positives = 70/119 (58%), Gaps = 2/119 (1%)
Frame = +2
Query: 29 FWHSQ--LSENVMQRFLEIIHYIYDPEIEGCWPQITNVLLLKLCEDSVDFERPIFDAPLS 202
FW ++ L N++ R L +++ +Y +IE + + LL++ S D+ R IF+ PLS
Sbjct: 2495 FWSNETRLPTNILDRMLSLLNSLYSAKIETQYLSLITNFLLEMTTKSPDYSRKIFEHPLS 2554
Query: 203 ECEFHEYTINTSWLGGTLPMTPLFSETQGSNLEFQGTLDNQKSSDNKGSMNSRHMIRAT 379
EC+F ++ I++SW + +TP+F +TQ S+ L ++S + GS++ R +RAT
Sbjct: 2555 ECKFQDFVIDSSWRYRSTVLTPMFVDTQASH-SIHRNLSQERSLSSSGSVSGR--VRAT 2610
>emb|CBN81785.1| DNA-dependent protein kinase catalytic subunit [Dicentrarchus labrax]
Length = 4087
Score = 74.7 bits (182), Expect = 1e-11
Identities = 35/90 (38%), Positives = 55/90 (61%), Gaps = 2/90 (2%)
Frame = +2
Query: 29 FWHSQ--LSENVMQRFLEIIHYIYDPEIEGCWPQITNVLLLKLCEDSVDFERPIFDAPLS 202
FW + L ++R L ++H +Y +IE C+ + LLL++ S DF+R +F+ PLS
Sbjct: 2526 FWSQEKRLPTATLERMLTVLHSLYSCQIERCFLSLATNLLLEMTSQSPDFKRNMFEYPLS 2585
Query: 203 ECEFHEYTINTSWLGGTLPMTPLFSETQGS 292
EC F +Y I+++W + MTP+F ETQ S
Sbjct: 2586 ECTFQDYVIDSNWRFRSTVMTPMFVETQSS 2615
>emb|CBN81784.1| DNA-dependent protein kinase catalytic subunit [Dicentrarchus labrax]
Length = 4109
Score = 74.7 bits (182), Expect = 1e-11
Identities = 35/90 (38%), Positives = 55/90 (61%), Gaps = 2/90 (2%)
Frame = +2
Query: 29 FWHSQ--LSENVMQRFLEIIHYIYDPEIEGCWPQITNVLLLKLCEDSVDFERPIFDAPLS 202
FW + L ++R L ++H +Y +IE C+ + LLL++ S DF+R +F+ PLS
Sbjct: 2517 FWSQEKRLPTATLERMLTVLHSLYSCQIERCFLSLATNLLLEMTSQSPDFKRNMFEYPLS 2576
Query: 203 ECEFHEYTINTSWLGGTLPMTPLFSETQGS 292
EC F +Y I+++W + MTP+F ETQ S
Sbjct: 2577 ECTFQDYVIDSNWRFRSTVMTPMFVETQSS 2606
>ref|XP_001626380.1| predicted protein [Nematostella vectensis]
gi|156213254|gb|EDO34280.1| predicted protein
[Nematostella vectensis]
Length = 1860
Score = 74.3 bits (181), Expect = 2e-11
Identities = 39/98 (39%), Positives = 58/98 (59%), Gaps = 2/98 (2%)
Frame = +2
Query: 5 IVRKNLQFFW--HSQLSENVMQRFLEIIHYIYDPEIEGCWPQITNVLLLKLCEDSVDFER 178
I++ LQ FW ++L ++R ++++ +Y E + T L+L L S DFER
Sbjct: 265 ILKLKLQNFWSDETRLPNTTLERLVDVLRAMYSTNTEQQYLSYTTNLVLHLTSFSPDFER 324
Query: 179 PIFDAPLSECEFHEYTINTSWLGGTLPMTPLFSETQGS 292
+F+ PLSEC+F EY I+ SW + MTPLF+ TQGS
Sbjct: 325 LMFEQPLSECKFEEYPIDYSWQQRHVVMTPLFAATQGS 362
>ref|XP_004615434.1| PREDICTED: DNA-dependent protein kinase catalytic subunit [Sorex
araneus]
Length = 4119
Score = 73.9 bits (180), Expect = 2e-11
Identities = 46/123 (37%), Positives = 70/123 (56%), Gaps = 6/123 (4%)
Frame = +2
Query: 29 FW--HSQLSENVMQRFLEIIHYIYDPEIEGCWPQITNVLLLKLCEDSVDFERPIFDAPLS 202
FW ++L N++ R L + + +Y P+IE + + LL++ S D+ PIF+ PLS
Sbjct: 2520 FWSHETRLPSNILDRLLAL-NSLYSPKIETHFLSLATDFLLEMTSRSPDYPNPIFEHPLS 2578
Query: 203 ECEFHEYTINTSWLGGTLPMTPLFSETQGSNLEFQGTLDNQKSSDNKGSMNSR----HMI 370
ECEF EYTI++ W + +TP+F ETQ S QG+L + +GS+ +R I
Sbjct: 2579 ECEFREYTIDSDWRFRSTVLTPMFVETQAS----QGSLQTRTP---EGSLPARGPAARQI 2631
Query: 371 RAT 379
RAT
Sbjct: 2632 RAT 2634
>ref|XP_004431207.1| PREDICTED: DNA-dependent protein kinase catalytic subunit isoform 2
[Ceratotherium simum simum]
Length = 4103
Score = 73.9 bits (180), Expect = 2e-11
Identities = 44/119 (36%), Positives = 66/119 (55%), Gaps = 2/119 (1%)
Frame = +2
Query: 29 FW--HSQLSENVMQRFLEIIHYIYDPEIEGCWPQITNVLLLKLCEDSVDFERPIFDAPLS 202
FW ++L N + R L + + +Y P+IE + + LL++ S D+ P+F+ PLS
Sbjct: 2526 FWSHETRLPSNTLDRLLAL-NSLYSPKIEAHFLSLATNFLLEMTSMSPDYPNPVFEHPLS 2584
Query: 203 ECEFHEYTINTSWLGGTLPMTPLFSETQGSNLEFQGTLDNQKSSDNKGSMNSRHMIRAT 379
ECEF EYTI++ W + +TP+F ETQ S Q T + S +G M + IRAT
Sbjct: 2585 ECEFQEYTIDSDWRFRSTVLTPMFIETQASQSALQ-TRTQEGSFSARGVMTGQ--IRAT 2640
>ref|XP_004431206.1| PREDICTED: DNA-dependent protein kinase catalytic subunit isoform 1
[Ceratotherium simum simum]
Length = 4134
Score = 73.9 bits (180), Expect = 2e-11
Identities = 44/119 (36%), Positives = 66/119 (55%), Gaps = 2/119 (1%)
Frame = +2
Query: 29 FW--HSQLSENVMQRFLEIIHYIYDPEIEGCWPQITNVLLLKLCEDSVDFERPIFDAPLS 202
FW ++L N + R L + + +Y P+IE + + LL++ S D+ P+F+ PLS
Sbjct: 2526 FWSHETRLPSNTLDRLLAL-NSLYSPKIEAHFLSLATNFLLEMTSMSPDYPNPVFEHPLS 2584
Query: 203 ECEFHEYTINTSWLGGTLPMTPLFSETQGSNLEFQGTLDNQKSSDNKGSMNSRHMIRAT 379
ECEF EYTI++ W + +TP+F ETQ S Q T + S +G M + IRAT
Sbjct: 2585 ECEFQEYTIDSDWRFRSTVLTPMFIETQASQSALQ-TRTQEGSFSARGVMTGQ--IRAT 2640
>ref|NP_989989.1| DNA-dependent protein kinase catalytic subunit [Gallus gallus]
gi|11761137|dbj|BAA36956.1| DNA-dependent protein kinase
catalytic subunit [Gallus gallus]
Length = 4133
Score = 73.9 bits (180), Expect = 2e-11
Identities = 40/119 (33%), Positives = 69/119 (57%), Gaps = 2/119 (1%)
Frame = +2
Query: 29 FW--HSQLSENVMQRFLEIIHYIYDPEIEGCWPQITNVLLLKLCEDSVDFERPIFDAPLS 202
FW ++L N++ R L +++ +Y +IE + + LL++ S D+ R IF+ PLS
Sbjct: 2522 FWSDETRLPANILDRMLMLLNSLYSAKIETQYLSLITNFLLEMTSKSPDYSRKIFEHPLS 2581
Query: 203 ECEFHEYTINTSWLGGTLPMTPLFSETQGSNLEFQGTLDNQKSSDNKGSMNSRHMIRAT 379
EC+FH++ I++SW + +TP+F ETQ S + + ++S GS+ R +RAT
Sbjct: 2582 ECKFHDFVIDSSWRYRSTMLTPMFVETQASQSTNRNS-SQERSLSISGSVGGR--VRAT 2637
>sp|Q8QGX4.1|PRKDC_CHICK RecName: Full=DNA-dependent protein kinase catalytic subunit;
Short=DNA-PK catalytic subunit; Short=DNA-PKcs
gi|20334955|dbj|BAB91148.1| DNA-dependent protein kinase
catalytic subunit [Gallus gallus]
Length = 4134
Score = 73.9 bits (180), Expect = 2e-11
Identities = 40/119 (33%), Positives = 69/119 (57%), Gaps = 2/119 (1%)
Frame = +2
Query: 29 FW--HSQLSENVMQRFLEIIHYIYDPEIEGCWPQITNVLLLKLCEDSVDFERPIFDAPLS 202
FW ++L N++ R L +++ +Y +IE + + LL++ S D+ R IF+ PLS
Sbjct: 2523 FWSDETRLPANILDRMLMLLNSLYSAKIETQYLSLITNFLLEMTSKSPDYSRKIFEHPLS 2582
Query: 203 ECEFHEYTINTSWLGGTLPMTPLFSETQGSNLEFQGTLDNQKSSDNKGSMNSRHMIRAT 379
EC+FH++ I++SW + +TP+F ETQ S + + ++S GS+ R +RAT
Sbjct: 2583 ECKFHDFVIDSSWRYRSTMLTPMFVETQASQSTNRNS-SQERSLSISGSVGGR--VRAT 2638
>gb|AAL40980.1| DNA-dependent protein kinase catalytic subunit [Equus caballus]
Length = 4106
Score = 73.6 bits (179), Expect = 3e-11
Identities = 44/119 (36%), Positives = 66/119 (55%), Gaps = 2/119 (1%)
Frame = +2
Query: 29 FW--HSQLSENVMQRFLEIIHYIYDPEIEGCWPQITNVLLLKLCEDSVDFERPIFDAPLS 202
FW ++L N + R L + + +Y P+IE + + LL++ S D+ P+FD PLS
Sbjct: 2498 FWSHETRLPSNTLDRLLAL-NSLYSPKIEAHFLSLATDFLLEMTSVSPDYSNPMFDHPLS 2556
Query: 203 ECEFHEYTINTSWLGGTLPMTPLFSETQGSNLEFQGTLDNQKSSDNKGSMNSRHMIRAT 379
EC+F EYTI++ W + +TP+F ETQ S Q T + S +G M + IRAT
Sbjct: 2557 ECKFQEYTIDSDWRFRSTVLTPMFIETQASQSALQ-TRTQEGSLSARGVMTGQ--IRAT 2612
>ref|XP_003466052.2| PREDICTED: DNA-dependent protein kinase catalytic subunit [Cavia
porcellus]
Length = 4259
Score = 73.2 bits (178), Expect = 3e-11
Identities = 42/120 (35%), Positives = 67/120 (55%), Gaps = 3/120 (2%)
Frame = +2
Query: 29 FW--HSQLSENVMQRFLEIIHYIYDPEIEGCWPQITNVLLLKLCEDSVDFERPIFDAPLS 202
FW ++L N++ R L + + +Y P+IEG + + LL++ S D+ P+F+ PLS
Sbjct: 2647 FWSHETRLPSNILDRLLAL-NSLYSPKIEGHFLSLATNFLLEMTSMSPDYPNPMFEHPLS 2705
Query: 203 ECEFHEYTINTSWLGGTLPMTPLFSETQGSNLEFQGTLDNQKSSDNKGSMNSR-HMIRAT 379
ECEF EYTI+ W + +TP+F ETQ S TL ++ D+ + + +RAT
Sbjct: 2706 ECEFREYTIDPDWRFRSTVLTPMFIETQAS----PSTLQSRTQEDSLPAQGPKAGQVRAT 2761
>ref|XP_004047035.1| PREDICTED: DNA-dependent protein kinase catalytic subunit [Gorilla
gorilla gorilla]
Length = 3653
Score = 73.2 bits (178), Expect = 3e-11
Identities = 46/123 (37%), Positives = 71/123 (57%), Gaps = 6/123 (4%)
Frame = +2
Query: 29 FW--HSQLSENVMQRFLEIIHYIYDPEIEGCWPQITNVLLLKLCEDSVDFERPIFDAPLS 202
FW ++L N + R L + + +Y P+IE + + LL++ S D+ P+F+ PLS
Sbjct: 2049 FWSHETRLPSNTLDRLLAL-NSLYSPKIEVHFLSLATNFLLEMTSMSPDYPNPMFEHPLS 2107
Query: 203 ECEFHEYTINTSWLGGTLPMTPLFSETQGSNLEFQGTLDNQKSSDNKGSMNSR----HMI 370
ECEF EYTI++ W + +TP+F ETQ S QGTL ++ +GS+++R I
Sbjct: 2108 ECEFQEYTIDSDWRFRSTVLTPMFVETQAS----QGTL---QTRTQEGSLSARWPVAGQI 2160
Query: 371 RAT 379
RAT
Sbjct: 2161 RAT 2163
>gb|AAC50210.3| DNA dependent protein kinase catalytic subunit [Homo sapiens]
Length = 4097
Score = 73.2 bits (178), Expect = 3e-11
Identities = 46/123 (37%), Positives = 71/123 (57%), Gaps = 6/123 (4%)
Frame = +2
Query: 29 FW--HSQLSENVMQRFLEIIHYIYDPEIEGCWPQITNVLLLKLCEDSVDFERPIFDAPLS 202
FW ++L N + R L + + +Y P+IE + + LL++ S D+ P+F+ PLS
Sbjct: 2524 FWSHETRLPSNTLDRLLAL-NSLYSPKIEVHFLSLATNFLLEMTSMSPDYPNPMFEHPLS 2582
Query: 203 ECEFHEYTINTSWLGGTLPMTPLFSETQGSNLEFQGTLDNQKSSDNKGSMNSR----HMI 370
ECEF EYTI++ W + +TP+F ETQ S QGTL ++ +GS+++R I
Sbjct: 2583 ECEFQEYTIDSDWRFRSTVLTPMFVETQAS----QGTL---QTRTQEGSLSARWPVAGQI 2635
Query: 371 RAT 379
RAT
Sbjct: 2636 RAT 2638