BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00030540
         (424 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EOY26248.1| Uncharacterized protein TCM_046829 [Theobroma cacao]    62   8e-08
gb|EOY26101.1| Uncharacterized protein TCM_027503 [Theobroma cacao]    62   8e-08
gb|EOY01158.1| DNA/RNA polymerases superfamily protein [Theobrom...    62   8e-08
gb|EOX95569.1| DNA/RNA polymerases superfamily protein [Theobrom...    62   8e-08
gb|EOX94045.1| DNA/RNA polymerases superfamily protein, partial ...    62   8e-08
gb|EOY08378.1| DNA/RNA polymerases superfamily protein, partial ...    61   2e-07
gb|ACZ80693.1| putative retrotransposon nucleocapsid protein [Fi...    61   2e-07
gb|EOY16836.1| Uncharacterized protein TCM_035724 [Theobroma cacao]    60   4e-07
ref|XP_004309164.1| PREDICTED: uncharacterized protein LOC101300...    56   6e-06
gb|AAF79348.1|AC007887_7 F15O4.13 [Arabidopsis thaliana]               55   7e-06
emb|CAN77045.1| hypothetical protein VITISV_035256 [Vitis vinifera]    55   7e-06
gb|EMJ00478.1| hypothetical protein PRUPE_ppa022873mg [Prunus pe...    55   1e-05

>gb|EOY26248.1| Uncharacterized protein TCM_046829 [Theobroma cacao]
          Length = 672

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 27/56 (48%), Positives = 42/56 (75%)
 Frame = +3

Query: 234 EENMQHFKLVLRKLEEKQLYINAKKYPWIQEELVFSGFVISKEGMKMDPNKVNIIS 401
           E++++H + VL  L+++QLYIN KK  ++Q E+VF GF++S EG+K DP K+  IS
Sbjct: 167 EKHLKHLRQVLEVLQKEQLYINLKKCSFMQPEVVFLGFIVSAEGLKPDPEKIRAIS 222


>gb|EOY26101.1| Uncharacterized protein TCM_027503 [Theobroma cacao]
          Length = 338

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 27/56 (48%), Positives = 42/56 (75%)
 Frame = +3

Query: 234 EENMQHFKLVLRKLEEKQLYINAKKYPWIQEELVFSGFVISKEGMKMDPNKVNIIS 401
           E++++H + VL  L+++QLYIN KK  ++Q E+VF GF++S EG+K DP K+  IS
Sbjct: 278 EKHLKHLRQVLEVLQKEQLYINLKKCSFMQPEVVFLGFIVSAEGLKPDPEKIRAIS 333


>gb|EOY01158.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
          Length = 786

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 27/56 (48%), Positives = 42/56 (75%)
 Frame = +3

Query: 234 EENMQHFKLVLRKLEEKQLYINAKKYPWIQEELVFSGFVISKEGMKMDPNKVNIIS 401
           E++++H + VL  L+++QLYIN KK  ++Q E+VF GF++S EG+K DP K+  IS
Sbjct: 157 EKHLKHLRQVLEVLQKEQLYINLKKCSFMQPEVVFLGFIVSAEGLKPDPEKIRAIS 212


>gb|EOX95569.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
          Length = 1452

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 27/56 (48%), Positives = 42/56 (75%)
 Frame = +3

Query: 234 EENMQHFKLVLRKLEEKQLYINAKKYPWIQEELVFSGFVISKEGMKMDPNKVNIIS 401
           E++++H + VL  L+++QLYIN KK  ++Q E+VF GF++S EG+K DP K+  IS
Sbjct: 705 EKHLKHLRQVLEVLQKEQLYINLKKCSFMQPEVVFLGFIVSAEGLKPDPEKIRAIS 760


>gb|EOX94045.1| DNA/RNA polymerases superfamily protein, partial [Theobroma cacao]
          Length = 624

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 27/56 (48%), Positives = 42/56 (75%)
 Frame = +3

Query: 234 EENMQHFKLVLRKLEEKQLYINAKKYPWIQEELVFSGFVISKEGMKMDPNKVNIIS 401
           E++++H + VL  L+++QLYIN KK  ++Q E+VF GF++S EG+K DP K+  IS
Sbjct: 157 EKHLKHLRQVLEVLQKEQLYINLKKCSFMQPEVVFLGFIVSAEGLKPDPEKIRAIS 212


>gb|EOY08378.1| DNA/RNA polymerases superfamily protein, partial [Theobroma cacao]
          Length = 277

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 26/56 (46%), Positives = 42/56 (75%)
 Frame = +3

Query: 234 EENMQHFKLVLRKLEEKQLYINAKKYPWIQEELVFSGFVISKEGMKMDPNKVNIIS 401
           E++++H + VL  L+++QLYIN KK  ++Q E+V+ GF++S EG+K DP K+  IS
Sbjct: 113 EKHLKHLRQVLEVLQKEQLYINLKKCSFMQPEVVYLGFIVSAEGLKPDPEKIRAIS 168


>gb|ACZ80693.1| putative retrotransposon nucleocapsid protein [Filobasidiella
           depauperata]
          Length = 1481

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 29/56 (51%), Positives = 39/56 (69%)
 Frame = +3

Query: 234 EENMQHFKLVLRKLEEKQLYINAKKYPWIQEELVFSGFVISKEGMKMDPNKVNIIS 401
           EE++ H   VL KL+E QL+ NA K  + Q E+VF GF+ SK+G+KMDP KV  I+
Sbjct: 663 EEHVVHVNQVLEKLKENQLWANAGKCQFFQSEVVFLGFIASKDGIKMDPKKVEAIT 718


>gb|EOY16836.1| Uncharacterized protein TCM_035724 [Theobroma cacao]
          Length = 475

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 26/56 (46%), Positives = 42/56 (75%)
 Frame = +3

Query: 234 EENMQHFKLVLRKLEEKQLYINAKKYPWIQEELVFSGFVISKEGMKMDPNKVNIIS 401
           E+++++ + VL  L+++QLYIN KK  ++Q E+VF GF++S EG+K DP K+  IS
Sbjct: 314 EKHLKYLRQVLEVLQKEQLYINLKKCSFMQPEVVFLGFIVSAEGLKPDPEKIRAIS 369


>ref|XP_004309164.1| PREDICTED: uncharacterized protein LOC101300012 [Fragaria vesca
           subsp. vesca]
          Length = 1034

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 24/55 (43%), Positives = 40/55 (72%)
 Frame = +3

Query: 234 EENMQHFKLVLRKLEEKQLYINAKKYPWIQEELVFSGFVISKEGMKMDPNKVNII 398
           EE++QH + VL  L+E +LY+N KK  ++ ++L+F G+V+S EG+ +D +KV  I
Sbjct: 827 EEHLQHLRKVLEVLQENKLYVNLKKCSFMTKKLLFLGYVVSSEGINVDQDKVKAI 881


>gb|AAF79348.1|AC007887_7 F15O4.13 [Arabidopsis thaliana]
          Length = 1887

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 26/56 (46%), Positives = 39/56 (69%)
 Frame = +3

Query: 231  LEENMQHFKLVLRKLEEKQLYINAKKYPWIQEELVFSGFVISKEGMKMDPNKVNII 398
            LEE+++H K+VL  L +++LY N KK  +  + LVF GFV+S +G+K+D  KV  I
Sbjct: 1073 LEEHVEHLKMVLEVLRKEKLYANLKKCTFGTDNLVFLGFVVSTDGVKVDEEKVKAI 1128


>emb|CAN77045.1| hypothetical protein VITISV_035256 [Vitis vinifera]
          Length = 665

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 23/55 (41%), Positives = 41/55 (74%)
 Frame = +3

Query: 234 EENMQHFKLVLRKLEEKQLYINAKKYPWIQEELVFSGFVISKEGMKMDPNKVNII 398
           E+++ H + V+R L +++LYIN KKY ++   ++F GFV+S +G+++DP+KV  I
Sbjct: 51  EDHVFHLRQVMRILRQEKLYINLKKYSFMTSAIMFLGFVVSAKGLEVDPDKVKAI 105


>gb|EMJ00478.1| hypothetical protein PRUPE_ppa022873mg [Prunus persica]
          Length = 777

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 25/56 (44%), Positives = 39/56 (69%)
 Frame = +3

Query: 234 EENMQHFKLVLRKLEEKQLYINAKKYPWIQEELVFSGFVISKEGMKMDPNKVNIIS 401
           EE++ HFK VLR L+E Q +IN KK  +   +L+F G+V+ ++G+++D  KV  IS
Sbjct: 196 EEHLVHFKQVLRVLKENQFFINLKKCNFCTNKLLFRGYVVGEDGIQVDDEKVRAIS 251