BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00030319
         (602 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EXB59779.1| hypothetical protein L484_010890 [Morus notabilis]     109   7e-22
ref|XP_002269533.2| PREDICTED: pentatricopeptide repeat-containi...   107   2e-21
gb|EMJ15619.1| hypothetical protein PRUPE_ppa026010mg, partial [...   105   7e-21
ref|XP_006474838.1| PREDICTED: pentatricopeptide repeat-containi...   102   8e-20
gb|EMJ27978.1| hypothetical protein PRUPE_ppa018015mg [Prunus pe...   101   1e-19
gb|EOY09977.1| Pentatricopeptide repeat superfamily protein, put...   101   2e-19
ref|XP_006352817.1| PREDICTED: pentatricopeptide repeat-containi...   100   2e-19
gb|EOX92237.1| Pentatricopeptide (PPR) repeat-containing protein...   100   2e-19
ref|XP_004242310.1| PREDICTED: pentatricopeptide repeat-containi...   100   2e-19
ref|XP_006452639.1| hypothetical protein CICLE_v10010822mg [Citr...   100   4e-19
ref|XP_006342693.1| PREDICTED: pentatricopeptide repeat-containi...    99   7e-19
emb|CBI30729.3| unnamed protein product [Vitis vinifera]               99   1e-18
ref|XP_006354721.1| PREDICTED: pentatricopeptide repeat-containi...    97   3e-18
ref|XP_004306202.1| PREDICTED: pentatricopeptide repeat-containi...    97   3e-18
gb|AAK55452.1|AC069300_7 putative PPR repeat protein [Oryza sati...    97   3e-18
ref|XP_004250888.1| PREDICTED: pentatricopeptide repeat-containi...    97   4e-18
ref|XP_006351154.1| PREDICTED: pentatricopeptide repeat-containi...    96   6e-18
ref|XP_004961943.1| PREDICTED: pentatricopeptide repeat-containi...    96   6e-18
ref|XP_004308755.1| PREDICTED: pentatricopeptide repeat-containi...    96   6e-18
ref|XP_004305376.1| PREDICTED: pentatricopeptide repeat-containi...    96   6e-18

>gb|EXB59779.1| hypothetical protein L484_010890 [Morus notabilis]
          Length = 775

 Score =  109 bits (272), Expect = 7e-22
 Identities = 52/136 (38%), Positives = 79/136 (58%)
 Frame = -2

Query: 418 LQKCIDTNAILPGQCVHGYLLKSGTSYPTLIFNRLIHMYAECQKISCARHVFDEMTGYDT 239
           LQ CID  A L G+ +H Y+ ++G  + T + NRLI +Y++C  I+ A H FD++   D 
Sbjct: 12  LQFCIDKKAHLAGKLIHAYIFRNGLIFNTFLSNRLIELYSKCSNIAYAHHTFDKIPKKDV 71

Query: 238 FSWSTMVSAYTKTGYMVDAHELFKQTPCKISAISNAMISGYVKLGQFEEAMGIFMGMVRE 59
           FSW+ ++ A+ K G + DAHELF + P +     N +IS  V+ G    A+ ++  M+ E
Sbjct: 72  FSWNAILGAHCKAGNLQDAHELFVKMPDRNIVSWNNVISALVRNGLERNALDVYDSMILE 131

Query: 58  GIERTRFTFVSILIGC 11
           G   TRFT  S+   C
Sbjct: 132 GFMPTRFTLASVFSAC 147


>ref|XP_002269533.2| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20770-like [Vitis vinifera]
          Length = 847

 Score =  107 bits (267), Expect = 2e-21
 Identities = 52/137 (37%), Positives = 79/137 (57%)
 Frame = -2

Query: 421 ILQKCIDTNAILPGQCVHGYLLKSGTSYPTLIFNRLIHMYAECQKISCARHVFDEMTGYD 242
           +LQ CID  A L G+ +H ++L+S  S  T + NRLI  YA+C  I  +R +FD+M   D
Sbjct: 11  LLQTCIDKKAHLAGKLIHAHMLRSRLSDDTFLSNRLIEFYAKCNAIDASRRLFDQMPKRD 70

Query: 241 TFSWSTMVSAYTKTGYMVDAHELFKQTPCKISAISNAMISGYVKLGQFEEAMGIFMGMVR 62
            ++W+ ++ AY K   + DAH LF + P +     N +IS   + G  ++A+G++  M R
Sbjct: 71  IYTWNAILGAYCKASELEDAHVLFAEMPERNIVSWNTLISALTRNGFEQKALGVYYRMSR 130

Query: 61  EGIERTRFTFVSILIGC 11
           EG   T FT  S+L  C
Sbjct: 131 EGFVPTHFTLASVLSAC 147


>gb|EMJ15619.1| hypothetical protein PRUPE_ppa026010mg, partial [Prunus persica]
          Length = 679

 Score =  105 bits (263), Expect = 7e-21
 Identities = 54/138 (39%), Positives = 81/138 (58%), Gaps = 1/138 (0%)
 Frame = -2

Query: 421 ILQKCIDTNAILPGQCVHGYLLKS-GTSYPTLIFNRLIHMYAECQKISCARHVFDEMTGY 245
           +LQ CID  A L G+ +H ++L+S G    T + NRL+ +Y++C  I  A  VFD+M   
Sbjct: 11  LLQGCIDKKAHLAGKLIHAFILRSNGLLSNTFLSNRLVELYSKCGNIGYADRVFDKMPHR 70

Query: 244 DTFSWSTMVSAYTKTGYMVDAHELFKQTPCKISAISNAMISGYVKLGQFEEAMGIFMGMV 65
           D +SW+ ++  Y K G + DA ELF + P + +   N +IS  V+ GQ E A+G++  M+
Sbjct: 71  DVYSWNAILGGYCKFGSLGDAQELFLKLPERNTVSWNTLISALVRHGQEETALGVYDTMI 130

Query: 64  REGIERTRFTFVSILIGC 11
            EG   TRFT  S+   C
Sbjct: 131 LEGFMPTRFTLASVFSAC 148


>ref|XP_006474838.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Citrus sinensis]
          Length = 624

 Score =  102 bits (254), Expect = 8e-20
 Identities = 56/182 (30%), Positives = 100/182 (54%), Gaps = 2/182 (1%)
 Frame = -2

Query: 541 NQCIEFIRKWSLLPKSGPKDLKLSSQPQEHTQIYPQTHLQ--ILQKCIDTNAILPGQCVH 368
           N C++     S + +  P +  L      H  + P T     +L+ C +   +  G+ +H
Sbjct: 90  NYCLK-----SFVERDNPVNAILLFYRLRHFDVLPDTFTCSFVLKACTNELDLSNGKIIH 144

Query: 367 GYLLKSGTSYPTLIFNRLIHMYAECQKISCARHVFDEMTGYDTFSWSTMVSAYTKTGYMV 188
           GY++K G ++  ++ N ++++YAEC +I  AR +F++M+  D  +W+ M++   K G +V
Sbjct: 145 GYVVKLGFTFNLVLQNMIVNLYAECGEIWDARLLFEKMSQRDVVTWNIMITQLIKRGDIV 204

Query: 187 DAHELFKQTPCKISAISNAMISGYVKLGQFEEAMGIFMGMVREGIERTRFTFVSILIGCR 8
           +A ELF++ P +       MISGYV+ G+ +EA+ +FM M   G+     T V++L  C 
Sbjct: 205 EASELFRKMPERSVRSWTGMISGYVQYGKAKEAVELFMEMEEVGVRPNEVTVVAVLAACA 264

Query: 7   DL 2
           DL
Sbjct: 265 DL 266


>gb|EMJ27978.1| hypothetical protein PRUPE_ppa018015mg [Prunus persica]
          Length = 624

 Score =  101 bits (252), Expect = 1e-19
 Identities = 54/144 (37%), Positives = 82/144 (56%)
 Frame = -2

Query: 433 THLQILQKCIDTNAILPGQCVHGYLLKSGTSYPTLIFNRLIHMYAECQKISCARHVFDEM 254
           T   +++ C + +AI  G+ VH +++K G        N LIHMY + Q +  AR VFD+M
Sbjct: 122 TFPSVIRACCNDDAIGEGKQVHAHVVKLGYGADGFCQNNLIHMYVKFQSLEEARRVFDKM 181

Query: 253 TGYDTFSWSTMVSAYTKTGYMVDAHELFKQTPCKISAISNAMISGYVKLGQFEEAMGIFM 74
              D  SW+T+++ Y++ G++ +A ELF+  P K S   NAMIS YV+  +F EA  +F 
Sbjct: 182 LRMDAVSWTTLITGYSQCGFVDEAFELFELMPEKNSVSWNAMISSYVQSDRFHEAFALFQ 241

Query: 73  GMVREGIERTRFTFVSILIGCRDL 2
            M  E +E  +F   S+L  C  L
Sbjct: 242 KMRVEKVELDKFMAASMLSACTGL 265


>gb|EOY09977.1| Pentatricopeptide repeat superfamily protein, putative isoform 1
           [Theobroma cacao] gi|508718081|gb|EOY09978.1|
           Pentatricopeptide repeat superfamily protein, putative
           isoform 1 [Theobroma cacao] gi|508718082|gb|EOY09979.1|
           Pentatricopeptide repeat superfamily protein, putative
           isoform 1 [Theobroma cacao] gi|508718083|gb|EOY09980.1|
           Pentatricopeptide repeat superfamily protein, putative
           isoform 1 [Theobroma cacao]
          Length = 777

 Score =  101 bits (251), Expect = 2e-19
 Identities = 52/137 (37%), Positives = 81/137 (59%)
 Frame = -2

Query: 421 ILQKCIDTNAILPGQCVHGYLLKSGTSYPTLIFNRLIHMYAECQKISCARHVFDEMTGYD 242
           +LQ CID  +ILPG+ +H Y+ +S     T + NRLI +Y++C   + A H+FD+    +
Sbjct: 11  LLQTCIDKKSILPGKVLHAYIFRSNLLANTFLCNRLIELYSKCNDPTSAHHMFDQTPQKN 70

Query: 241 TFSWSTMVSAYTKTGYMVDAHELFKQTPCKISAISNAMISGYVKLGQFEEAMGIFMGMVR 62
            +SW+ ++SA  K G +  A ++F+Q P +  A  N +IS  VK G  E+A+ ++  MV 
Sbjct: 71  IYSWNAVLSALCKAGNLTFARKVFEQMPERNVASWNNLISLMVKNGFQEKALDVYKLMVF 130

Query: 61  EGIERTRFTFVSILIGC 11
           EG   T  TF S+L  C
Sbjct: 131 EGFLPTHVTFASVLSAC 147


>ref|XP_006352817.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20770-like [Solanum tuberosum]
          Length = 765

 Score =  100 bits (250), Expect = 2e-19
 Identities = 52/151 (34%), Positives = 83/151 (54%)
 Frame = -2

Query: 454 HTQIYPQTHLQILQKCIDTNAILPGQCVHGYLLKSGTSYPTLIFNRLIHMYAECQKISCA 275
           H +I     + +LQ  IDT A   G+ +H ++L+ G S  T + NRLI +Y++   I  A
Sbjct: 2   HARINTAYLVNLLQTSIDTKAYTAGKLLHAHILRIGLSADTFLLNRLIELYSKSGHIHTA 61

Query: 274 RHVFDEMTGYDTFSWSTMVSAYTKTGYMVDAHELFKQTPCKISAISNAMISGYVKLGQFE 95
           RH+FD+M   + +SW ++++AY K G + +AHELF   P + S   N +IS + +     
Sbjct: 62  RHLFDQMLQPNIYSWHSLLTAYCKQGQLDNAHELFSIMPERNSVSWNTLISAFARNRHET 121

Query: 94  EAMGIFMGMVREGIERTRFTFVSILIGCRDL 2
           +A+ ++  M   G   T  TF S+L  C  L
Sbjct: 122 KALEVYSQMNAHGFSPTHITFASVLSACGGL 152


>gb|EOX92237.1| Pentatricopeptide (PPR) repeat-containing protein [Theobroma cacao]
          Length = 782

 Score =  100 bits (250), Expect = 2e-19
 Identities = 46/137 (33%), Positives = 84/137 (61%)
 Frame = -2

Query: 421 ILQKCIDTNAILPGQCVHGYLLKSGTSYPTLIFNRLIHMYAECQKISCARHVFDEMTGYD 242
           +LQ+ + +  +L G+ +H  ++K+G  +   + N L+++Y++      A+ +FDEM    
Sbjct: 16  LLQESLRSKDLLAGKSIHARIIKAGLHFSVFLLNNLMNVYSKTGSFYDAQSLFDEMPVKT 75

Query: 241 TFSWSTMVSAYTKTGYMVDAHELFKQTPCKISAISNAMISGYVKLGQFEEAMGIFMGMVR 62
            FSW+T++SAY+K G M +A+E+F + P   S   + MI GY ++G FE A+ +F  M++
Sbjct: 76  IFSWNTLLSAYSKQGKMAEANEIFNKIPNPDSVSWSTMIVGYNQMGHFESAIKVFDEMIK 135

Query: 61  EGIERTRFTFVSILIGC 11
           E +  T++T  S+L  C
Sbjct: 136 ERVTPTQYTITSVLASC 152



 Score = 67.0 bits (162), Expect = 4e-09
 Identities = 45/145 (31%), Positives = 73/145 (50%), Gaps = 1/145 (0%)
 Frame = -2

Query: 433 THLQILQKCIDTNAILPGQCVHGYLLKSGTSYPTLIFNRLIHMYAECQKISCARHVFDEM 254
           T   +L  C     +  G+ VH  ++K G S    + N L++MYA+         +FD M
Sbjct: 144 TITSVLASCAAIETLDIGRKVHSCVVKFGLSSYVSVANSLLNMYAKSGDPMITGVIFDRM 203

Query: 253 TGYDTFSWSTMVSAYTKTGYMVDAHELFKQTPCKISAISNAMISGYVKLGQFEEAMGIFM 74
              DT SW+ M+S + + G +  A E F +   +     N+MI+GY + G   +A+G F 
Sbjct: 204 GYRDTPSWNVMISLHMQYGQVDLAREQFCRMNERDIVTWNSMIAGYNQHGFDLDALGTFG 263

Query: 73  GMVREG-IERTRFTFVSILIGCRDL 2
            M+R+  +   +FTF+S L  C +L
Sbjct: 264 NMLRDSLLLPDKFTFISALSACANL 288


>ref|XP_004242310.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20770-like [Solanum lycopersicum]
          Length = 765

 Score =  100 bits (250), Expect = 2e-19
 Identities = 51/151 (33%), Positives = 83/151 (54%)
 Frame = -2

Query: 454 HTQIYPQTHLQILQKCIDTNAILPGQCVHGYLLKSGTSYPTLIFNRLIHMYAECQKISCA 275
           H +I     + +LQ  IDT A   G+ +H ++L+ G S  T + NRLI +Y++   I  A
Sbjct: 2   HARINTAYLVNLLQTSIDTKAYSAGKLLHAHILRIGLSADTFLLNRLIELYSKSGHIHTA 61

Query: 274 RHVFDEMTGYDTFSWSTMVSAYTKTGYMVDAHELFKQTPCKISAISNAMISGYVKLGQFE 95
           RH+FD+M   + +SW ++++AY K G + +AHELF   P + +   N +IS + +     
Sbjct: 62  RHLFDQMLEPNVYSWHSLLTAYCKQGQLDNAHELFSNMPERNTVSWNTLISAFARNHHET 121

Query: 94  EAMGIFMGMVREGIERTRFTFVSILIGCRDL 2
           +A+ ++  M   G   T  TF S+L  C  L
Sbjct: 122 KALKVYSQMNAHGFSPTHITFASVLSACGGL 152


>ref|XP_006452639.1| hypothetical protein CICLE_v10010822mg [Citrus clementina]
           gi|557555865|gb|ESR65879.1| hypothetical protein
           CICLE_v10010822mg [Citrus clementina]
          Length = 625

 Score =  100 bits (248), Expect = 4e-19
 Identities = 48/140 (34%), Positives = 87/140 (62%)
 Frame = -2

Query: 421 ILQKCIDTNAILPGQCVHGYLLKSGTSYPTLIFNRLIHMYAECQKISCARHVFDEMTGYD 242
           +L+ C +   +  G+ +HGY++K G ++  ++ N ++++YAEC +I  AR +F++M+  D
Sbjct: 127 VLKACTNELDLYNGKIIHGYVVKLGFTFNLVLQNMIVNLYAECGEIWDARLLFEKMSQRD 186

Query: 241 TFSWSTMVSAYTKTGYMVDAHELFKQTPCKISAISNAMISGYVKLGQFEEAMGIFMGMVR 62
             +W+ M++   K G +V+A ELF++ P +       MISGYV+ G+ +EA+ +FM M +
Sbjct: 187 VVTWNIMITQLIKRGDIVEASELFRKMPERSVRSWTGMISGYVQCGKPKEAVELFMEMEQ 246

Query: 61  EGIERTRFTFVSILIGCRDL 2
            G+     T V++L  C DL
Sbjct: 247 VGVRPNEVTVVAVLAACADL 266


>ref|XP_006342693.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Solanum tuberosum]
          Length = 628

 Score = 99.4 bits (246), Expect = 7e-19
 Identities = 53/136 (38%), Positives = 77/136 (56%)
 Frame = -2

Query: 409 CIDTNAILPGQCVHGYLLKSGTSYPTLIFNRLIHMYAECQKISCARHVFDEMTGYDTFSW 230
           CID NA+  G+ +HG+++K G  +     N LIHMY   + +  A+ VFD M   D  SW
Sbjct: 135 CID-NAVEEGKQIHGHVVKFGFGFDRFSQNNLIHMYVNFRCLEEAKRVFDNMCERDDVSW 193

Query: 229 STMVSAYTKTGYMVDAHELFKQTPCKISAISNAMISGYVKLGQFEEAMGIFMGMVREGIE 50
           +T++S Y + GY+ +A ++F     K S I NAMIS YV+  +F EA  +F  M  EG+ 
Sbjct: 194 TTLISGYAQLGYLDEAFQVFDSITEKSSVIWNAMISAYVQSNRFHEAFALFERMGSEGVV 253

Query: 49  RTRFTFVSILIGCRDL 2
             +F   S+L  C  L
Sbjct: 254 VDKFLAASMLSACTRL 269


>emb|CBI30729.3| unnamed protein product [Vitis vinifera]
          Length = 506

 Score = 98.6 bits (244), Expect = 1e-18
 Identities = 54/151 (35%), Positives = 80/151 (52%), Gaps = 3/151 (1%)
 Frame = -2

Query: 454 HTQIYPQ--THLQILQKCIDTNAILPGQCVHGYLLKSGTSYPTLIFNRLIHMYAECQKIS 281
           H  + P   T    L+ C   + +  G+ +HG++LK+G      I N LIH+YA C  I 
Sbjct: 101 HASVLPDKYTFTFALKSCGSFSGVEEGRQIHGHVLKTGLGDDLFIQNTLIHLYASCGCIE 160

Query: 280 CARHVFDEMTGYDTFSWSTMVSAYTKTGYM-VDAHELFKQTPCKISAISNAMISGYVKLG 104
            ARH+ D M   D  SW+ ++SAY + G M + +  +F +TP K     NAMI+GY   G
Sbjct: 161 DARHLLDRMLERDVVSWNALLSAYAERGLMELASRRVFGETPVKNVVSWNAMITGYSHAG 220

Query: 103 QFEEAMGIFMGMVREGIERTRFTFVSILIGC 11
           +F E + +F  M   G++    T VS+L  C
Sbjct: 221 RFSEVLVLFEDMQHAGVKPDNCTLVSVLSAC 251


>ref|XP_006354721.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Solanum tuberosum]
          Length = 786

 Score = 97.4 bits (241), Expect = 3e-18
 Identities = 50/144 (34%), Positives = 85/144 (59%), Gaps = 1/144 (0%)
 Frame = -2

Query: 430 HLQILQKCIDTNAILPGQCVHGYLLKSGTSYPTLIFNRLIHMYAECQKISCARHVFDEMT 251
           ++ +LQ  + +    P + +HG ++KSG      + N LI+ YA+   +S AR VFD M 
Sbjct: 16  YVSLLQDSLKSKDPFPIKLIHGRIIKSGIHLSVFLMNNLINGYAKTGFLSYARKVFDVMP 75

Query: 250 GYDTFSWSTMVSAYTKTGYMVDAHELFKQTPCKISAISNAMISGYVKLGQFEEAMGIFMG 71
             DT SW+T++S Y+K G + +AH +FK+ P + S     MI+GY  +G+F+ A+ +F+ 
Sbjct: 76  VRDTSSWNTLLSGYSKGGLINEAHSIFKEMPYRDSVSWTTMIAGYNFVGRFQVAIQMFLE 135

Query: 70  MV-REGIERTRFTFVSILIGCRDL 2
           MV    +  T++TF S+   C ++
Sbjct: 136 MVSASDVLPTQYTFTSVFASCAEI 159



 Score = 73.6 bits (179), Expect = 4e-11
 Identities = 44/145 (30%), Positives = 77/145 (53%), Gaps = 1/145 (0%)
 Frame = -2

Query: 433 THLQILQKCIDTNAILPGQCVHGYLLKSGTSYPTLIFNRLIHMYAECQKISCARHVFDEM 254
           T   +   C +  A+  G+ VH +++K G S    + N +++MYA+    + A+ VFD +
Sbjct: 148 TFTSVFASCAEIRALNEGRRVHSFVVKFGLSSYVSVANSMLNMYAKSGDSNAAQMVFDGI 207

Query: 253 TGYDTFSWSTMVSAYTKTGYMVDAHELFKQTPCKISAISNAMISGYVKLGQFEEAMGIFM 74
              +T SW+T++S Y +TG +  A   F+Q         N+M++GY + G    A+ +F 
Sbjct: 208 VVKNTSSWNTLISLYMQTGQVDLALAQFEQMNEHDIISWNSMVTGYNQRGFDVLALNMFS 267

Query: 73  GMVRE-GIERTRFTFVSILIGCRDL 2
            M++E  +E  R+T  S L  C +L
Sbjct: 268 KMLKESSLEPDRYTLASALSACANL 292



 Score = 61.6 bits (148), Expect = 2e-07
 Identities = 39/161 (24%), Positives = 80/161 (49%), Gaps = 4/161 (2%)
 Frame = -2

Query: 481 LKLSSQPQEHTQIYPQ--THLQILQKCIDTNAILPGQCVHGYLLKSGTSYPTLIFNRLIH 308
           L + S+  + + + P   T    L  C +   +  G+ +H YL+++  +    + N LI 
Sbjct: 263 LNMFSKMLKESSLEPDRYTLASALSACANLGELNVGKQIHAYLVRTEFNTSGAVGNSLIC 322

Query: 307 MYAECQKISCARHVFDEM--TGYDTFSWSTMVSAYTKTGYMVDAHELFKQTPCKISAISN 134
           MY+    +  AR + ++   +  +  +++ +++ Y K G +  A ++F     +   +  
Sbjct: 323 MYSRSGGVDIARRILEKNRESNLNVIAFTALLNGYIKLGDINPARKIFDSLKDRDVVVWT 382

Query: 133 AMISGYVKLGQFEEAMGIFMGMVREGIERTRFTFVSILIGC 11
           AMI GYV+ G  ++AM +F  MV+EG +   +T  ++L  C
Sbjct: 383 AMIVGYVQNGFNDDAMELFRLMVKEGPDPNNYTLAAMLSVC 423



 Score = 55.8 bits (133), Expect = 9e-06
 Identities = 30/86 (34%), Positives = 48/86 (55%), Gaps = 1/86 (1%)
 Frame = -2

Query: 421 ILQKCIDTNAILPGQCVHGYLLKSGTSYPTLIFNRLIHMYAECQKISCARHVFDEM-TGY 245
           +L  C    ++  G+ +H   +K+G +    + N LI MYA+   ISCAR VFD +    
Sbjct: 419 MLSVCSSVASLNHGKQIHSAAIKAGEALSVSVSNALITMYAKAGNISCARRVFDLIHLNR 478

Query: 244 DTFSWSTMVSAYTKTGYMVDAHELFK 167
           DT SW++M+ A  + G   +A +LF+
Sbjct: 479 DTVSWTSMILALAQHGLGAEALQLFE 504


>ref|XP_004306202.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Fragaria vesca subsp. vesca]
          Length = 1013

 Score = 97.1 bits (240), Expect = 3e-18
 Identities = 49/137 (35%), Positives = 79/137 (57%)
 Frame = -2

Query: 421 ILQKCIDTNAILPGQCVHGYLLKSGTSYPTLIFNRLIHMYAECQKISCARHVFDEMTGYD 242
           +LQ C++      G+ +H  ++KSG      + N LI+ Y +      A HVFDEM   +
Sbjct: 247 LLQACLNKRHPFAGKTIHAQIIKSGLHLGVFLMNNLINYYIKTGSYVDAHHVFDEMPLRN 306

Query: 241 TFSWSTMVSAYTKTGYMVDAHELFKQTPCKISAISNAMISGYVKLGQFEEAMGIFMGMVR 62
            FSW+T++S YTK G +  A  +F   P + S    AMI G+ ++G++ +A+ +F+ MV 
Sbjct: 307 RFSWNTILSNYTKQGRLDAACRVFNAMPERDSVSWTAMIVGFNQMGRYGDAINMFLEMVL 366

Query: 61  EGIERTRFTFVSILIGC 11
           +G+  T+FTF +IL  C
Sbjct: 367 DGVPVTQFTFTNILSAC 383



 Score = 66.6 bits (161), Expect = 5e-09
 Identities = 44/145 (30%), Positives = 69/145 (47%), Gaps = 1/145 (0%)
 Frame = -2

Query: 433 THLQILQKCIDTNAILPGQCVHGYLLKSGTSYPTLIFNRLIHMYAECQKISCARHVFDEM 254
           T   IL  C     +  G+ VH +++K        + N L++MYA+C     A+ VF+ M
Sbjct: 375 TFTNILSACASVKGLDIGRKVHSFVVKLAVGSYVSVGNCLVNMYAKCGDPGTAKIVFERM 434

Query: 253 TGYDTFSWSTMVSAYTKTGYMVDAHELFKQTPCKISAISNAMISGYVKLGQFEEAMGIFM 74
              +  SW+ M+S + + G    A   F Q         N+MI+GY + G   EA+ IF 
Sbjct: 435 RLKNVSSWNHMISIHMQCGRADLALAQFNQMTEHDIVSWNSMIAGYNQHGLHTEAVSIFS 494

Query: 73  GMVREG-IERTRFTFVSILIGCRDL 2
            M ++  ++  +FT  SIL  C  L
Sbjct: 495 SMRKDSFLKPDKFTLASILSACASL 519



 Score = 56.2 bits (134), Expect = 7e-06
 Identities = 36/141 (25%), Positives = 68/141 (48%), Gaps = 3/141 (2%)
 Frame = -2

Query: 433 THLQILQKCIDTNAILPGQCVHGYLLKSGTSYPTLIFNRLIHMYAECQKISCARHVFDEM 254
           T   IL  C     +  G+ +H  ++++G     ++ N LI MYA+   +  A  V ++ 
Sbjct: 508 TLASILSACASLEKLELGKQIHALIVRAGLDTSEVVVNALISMYAKSGGLEIAEKVLEQC 567

Query: 253 TGYDT--FSWSTMVSAYTKTGYMVDAHELFKQT-PCKISAISNAMISGYVKLGQFEEAMG 83
              D    +++ ++  Y K G +  A ++F     C + A + AMI GY++ G   +A+ 
Sbjct: 568 GTSDLNLIAFTALLDGYIKVGDVNPARQIFDSLRDCDVVAWT-AMIVGYMQNGLNNDALE 626

Query: 82  IFMGMVREGIERTRFTFVSIL 20
           +F  M+ EG     +T  ++L
Sbjct: 627 LFRSMIAEGPRPNNYTLAAML 647


>gb|AAK55452.1|AC069300_7 putative PPR repeat protein [Oryza sativa Japonica Group]
           gi|31433484|gb|AAP54989.1| pentatricopeptide, putative,
           expressed [Oryza sativa Japonica Group]
          Length = 905

 Score = 97.1 bits (240), Expect = 3e-18
 Identities = 54/163 (33%), Positives = 84/163 (51%), Gaps = 4/163 (2%)
 Frame = -2

Query: 478 KLSSQPQEHTQIYPQ--THLQILQKCIDTN--AILPGQCVHGYLLKSGTSYPTLIFNRLI 311
           ++ ++ Q+   + P   T  ++ Q C      A+  G+  H  ++ SG      + N L+
Sbjct: 42  RMPAEQQQPPPVAPARVTFSRVFQSCAQAGREALAAGRAAHARMVVSGFVPTAFVSNCLL 101

Query: 310 HMYAECQKISCARHVFDEMTGYDTFSWSTMVSAYTKTGYMVDAHELFKQTPCKISAISNA 131
            MYA C   +CAR VFD M   DT SW+TM++AY+  G +  A  LF   P       NA
Sbjct: 102 QMYARCAGAACARRVFDAMPRRDTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNA 161

Query: 130 MISGYVKLGQFEEAMGIFMGMVREGIERTRFTFVSILIGCRDL 2
           ++SGY + G F+E++ +F+ M R G+   R TF  +L  C  L
Sbjct: 162 LVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCSAL 204


>ref|XP_004250888.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
           chloroplastic-like [Solanum lycopersicum]
          Length = 522

 Score = 96.7 bits (239), Expect = 4e-18
 Identities = 55/157 (35%), Positives = 84/157 (53%)
 Frame = -2

Query: 472 SSQPQEHTQIYPQTHLQILQKCIDTNAILPGQCVHGYLLKSGTSYPTLIFNRLIHMYAEC 293
           +SQ Q H   YP       +  I  N    G  +HG ++K G  + T I N L++MYA C
Sbjct: 113 NSQVQPHLLTYPSVFKAYARGGIAKN----GAQLHGRIMKLGLEFDTFIRNTLLYMYASC 168

Query: 292 QKISCARHVFDEMTGYDTFSWSTMVSAYTKTGYMVDAHELFKQTPCKISAISNAMISGYV 113
             +  AR +FDE    D  SW++M+    K+G + D+  LF + P +     N+MISG+V
Sbjct: 169 GFLVEARKLFDEDEIEDVVSWNSMIIGLAKSGEIDDSWRLFSKMPTRNDVSWNSMISGFV 228

Query: 112 KLGQFEEAMGIFMGMVREGIERTRFTFVSILIGCRDL 2
           + G++ EA+ +F  M  E ++ + FT VS+L  C  L
Sbjct: 229 RNGKWNEALELFSTMQEENVKPSEFTLVSLLNACGHL 265


>ref|XP_006351154.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g31430-like [Solanum tuberosum]
          Length = 604

 Score = 96.3 bits (238), Expect = 6e-18
 Identities = 45/144 (31%), Positives = 84/144 (58%)
 Frame = -2

Query: 433 THLQILQKCIDTNAILPGQCVHGYLLKSGTSYPTLIFNRLIHMYAECQKISCARHVFDEM 254
           T +  L  C    ++  G+ +HGY+++    +  +I N L+ MY +C  +  AR +FD+M
Sbjct: 216 TVVSTLSACAALKSLELGREIHGYVVEE-LEFSLIIGNALVDMYCKCGCLMVAREIFDDM 274

Query: 253 TGYDTFSWSTMVSAYTKTGYMVDAHELFKQTPCKISAISNAMISGYVKLGQFEEAMGIFM 74
              +   W++MVS Y  +G + +A +LF+++P +   +   MI+GYV+  + ++AM +F 
Sbjct: 275 PMKNVICWTSMVSGYVNSGQLDEARKLFERSPVRDLVLWTTMINGYVQFNRVDDAMDLFR 334

Query: 73  GMVREGIERTRFTFVSILIGCRDL 2
            M  +GI+  ++T V++L GC  L
Sbjct: 335 SMQMQGIKPDKYTLVALLTGCAQL 358


>ref|XP_004961943.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g20540-like [Setaria italica]
          Length = 549

 Score = 96.3 bits (238), Expect = 6e-18
 Identities = 51/144 (35%), Positives = 77/144 (53%)
 Frame = -2

Query: 433 THLQILQKCIDTNAILPGQCVHGYLLKSGTSYPTLIFNRLIHMYAECQKISCARHVFDEM 254
           T+  +L+ C    A+  G+ VH ++++SG     ++ N +I MY  C  +S AR VFDEM
Sbjct: 120 TYPFLLKACGGLAAVELGRQVHAHVVRSGCEAHDIVRNSMIEMYTRCGDLSLARRVFDEM 179

Query: 253 TGYDTFSWSTMVSAYTKTGYMVDAHELFKQTPCKISAISNAMISGYVKLGQFEEAMGIFM 74
              D  SW+T++SA+ + G M  A  LF   P K      A++SGY  +G F  A+ +F 
Sbjct: 180 RNKDAVSWNTLISAHARLGQMRRARALFDSMPDKTVVSWTALVSGYTAVGDFAGAVEVFR 239

Query: 73  GMVREGIERTRFTFVSILIGCRDL 2
            M  EG E    + V++L  C  L
Sbjct: 240 LMQMEGFEPDDVSIVAVLPACAQL 263


>ref|XP_004308755.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g20230-like [Fragaria vesca subsp. vesca]
          Length = 631

 Score = 96.3 bits (238), Expect = 6e-18
 Identities = 52/143 (36%), Positives = 82/143 (57%), Gaps = 2/143 (1%)
 Frame = -2

Query: 433 THLQILQKCIDTNAILPGQCVHGYLLKSGTSYPTLIFNRLIHMYAECQKISCARHVFDEM 254
           T+  +L+ C + + +  G+CVHG  L++G      +   LI MY +C ++S AR VFDE+
Sbjct: 63  TYPFVLKCCAELSDVRIGKCVHGLSLRTGLESDVYVGTSLIDMYVKCCEMSNARMVFDEL 122

Query: 253 TGYDTFSWSTMVSAYTKTGYMVDAHELFKQTPCKISAISNAMISGYVKLGQFEEAMGIFM 74
           +     SW+ M++ Y + G +  A ELF +  CK      AMISGY + G  E+A+G+F 
Sbjct: 123 SVRGVSSWNAMIAGYMREGEICVAEELFGEMRCKNIVSWTAMISGYTQNGMAEQALGVFD 182

Query: 73  GMVREG--IERTRFTFVSILIGC 11
            M+RE   ++    T +S+L GC
Sbjct: 183 EMLREDSEVKPNWVTVMSVLPGC 205


>ref|XP_004305376.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g03800-like, partial [Fragaria vesca subsp. vesca]
          Length = 807

 Score = 96.3 bits (238), Expect = 6e-18
 Identities = 49/137 (35%), Positives = 76/137 (55%)
 Frame = -2

Query: 421 ILQKCIDTNAILPGQCVHGYLLKSGTSYPTLIFNRLIHMYAECQKISCARHVFDEMTGYD 242
           +L  C  +NA L GQ VH Y +K+G      + N LI +Y EC  +     +F+ M   D
Sbjct: 203 VLTACTGSNAYLEGQGVHAYAVKNGLEGDLSVGNALIGLYGECGSVGDVAALFERMPARD 262

Query: 241 TFSWSTMVSAYTKTGYMVDAHELFKQTPCKISAISNAMISGYVKLGQFEEAMGIFMGMVR 62
             +W+ M++AY   G +  A E+F Q P + S   NA+I+G+ + G+   A+ +FM M+ 
Sbjct: 263 AITWTEMITAYMGFGMVELAVEMFDQMPERNSYSYNALIAGFCRNGEGLRALDLFMKMME 322

Query: 61  EGIERTRFTFVSILIGC 11
           EG+E T FT  S++  C
Sbjct: 323 EGVELTEFTLSSVVGAC 339



 Score = 56.2 bits (134), Expect = 7e-06
 Identities = 28/78 (35%), Positives = 44/78 (56%)
 Frame = -2

Query: 244 DTFSWSTMVSAYTKTGYMVDAHELFKQTPCKISAISNAMISGYVKLGQFEEAMGIFMGMV 65
           DT   + +VSAY K G +  A+ +F+  P        AM+SG+ K G+ ++A  +F  M 
Sbjct: 27  DTHLGNALVSAYLKLGLVPQAYRVFQSLPSPNVVSFTAMVSGFAKSGREQQAAELFCRMR 86

Query: 64  REGIERTRFTFVSILIGC 11
           R GIE   ++FV++L  C
Sbjct: 87  RSGIEPNEYSFVAMLTAC 104