BLASTX nr result

ID: Ephedra28_contig00030296 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00030296
         (599 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK25048.1| unknown [Picea sitchensis]                              67   5e-09
gb|AFG67414.1| hypothetical protein CL4360Contig1_02, partial [P...    57   3e-06
gb|AEW09155.1| hypothetical protein CL4360Contig1_02, partial [P...    57   3e-06
gb|AFG67415.1| hypothetical protein CL4360Contig1_02, partial [P...    56   8e-06

>gb|ABK25048.1| unknown [Picea sitchensis]
          Length = 510

 Score = 66.6 bits (161), Expect = 5e-09
 Identities = 46/137 (33%), Positives = 66/137 (48%), Gaps = 3/137 (2%)
 Frame = +2

Query: 41  MSPGGCMEEAAMGLTAQLVGMLDEDEMXXXXXXXXXXXXXXXXXXXSEF---QPQSEEEA 211
           M   G  +EAA+GL AQ+   + E +                     E     P+  +E 
Sbjct: 376 MEKRGAHQEAAIGLAAQIFKFMTELKFNRVFKEWRAVTKRLLISELVEVFRRHPRPSKEV 435

Query: 212 PCLRRFSVELAKGVLEKMKGTESVLGCGRRERLRSWLKEILATTSEMERYVTFSGSVGVT 391
             +RRFS+EL   V+EK    +       R  L + L+ ++ TTSEME Y TFSGSVG++
Sbjct: 436 ASIRRFSIELLIAVMEK----DDKAALEERTDLVNALEGVMETTSEMESYSTFSGSVGLS 491

Query: 392 PHSLSMHDLVLSAIHTL 442
            H + +H LV SA+  L
Sbjct: 492 RHRIPIHSLVQSAMELL 508


>gb|AFG67414.1| hypothetical protein CL4360Contig1_02, partial [Pinus taeda]
          Length = 83

 Score = 57.4 bits (137), Expect = 3e-06
 Identities = 30/77 (38%), Positives = 46/77 (59%)
 Frame = +2

Query: 191 PQSEEEAPCLRRFSVELAKGVLEKMKGTESVLGCGRRERLRSWLKEILATTSEMERYVTF 370
           P+   E P +RRFS+EL   V++  +    ++    R  L   L+ ++ TTSEME Y TF
Sbjct: 11  PRPSREVPSIRRFSIELLFAVMKMDRSAIEMM----RSELEEALEAVMETTSEMESYSTF 66

Query: 371 SGSVGVTPHSLSMHDLV 421
           SGSVG++ H +++  LV
Sbjct: 67  SGSVGLSRHRVTISSLV 83


>gb|AEW09155.1| hypothetical protein CL4360Contig1_02, partial [Pinus radiata]
           gi|383168640|gb|AFG67416.1| hypothetical protein
           CL4360Contig1_02, partial [Pinus taeda]
           gi|383168642|gb|AFG67417.1| hypothetical protein
           CL4360Contig1_02, partial [Pinus taeda]
           gi|383168644|gb|AFG67418.1| hypothetical protein
           CL4360Contig1_02, partial [Pinus taeda]
           gi|383168646|gb|AFG67419.1| hypothetical protein
           CL4360Contig1_02, partial [Pinus taeda]
           gi|383168648|gb|AFG67420.1| hypothetical protein
           CL4360Contig1_02, partial [Pinus taeda]
           gi|383168650|gb|AFG67421.1| hypothetical protein
           CL4360Contig1_02, partial [Pinus taeda]
           gi|383168652|gb|AFG67422.1| hypothetical protein
           CL4360Contig1_02, partial [Pinus taeda]
           gi|383168654|gb|AFG67423.1| hypothetical protein
           CL4360Contig1_02, partial [Pinus taeda]
           gi|383168656|gb|AFG67424.1| hypothetical protein
           CL4360Contig1_02, partial [Pinus taeda]
           gi|383168658|gb|AFG67425.1| hypothetical protein
           CL4360Contig1_02, partial [Pinus taeda]
           gi|383168660|gb|AFG67426.1| hypothetical protein
           CL4360Contig1_02, partial [Pinus taeda]
          Length = 83

 Score = 57.4 bits (137), Expect = 3e-06
 Identities = 30/77 (38%), Positives = 46/77 (59%)
 Frame = +2

Query: 191 PQSEEEAPCLRRFSVELAKGVLEKMKGTESVLGCGRRERLRSWLKEILATTSEMERYVTF 370
           P+   E P +RRFS+EL   V++  +    ++    R  L   L+ ++ TTSEME Y TF
Sbjct: 11  PRPSREVPSIRRFSIELLIAVMKMDRSAIEMM----RSELEEALEAVMETTSEMESYSTF 66

Query: 371 SGSVGVTPHSLSMHDLV 421
           SGSVG++ H +++  LV
Sbjct: 67  SGSVGLSRHRVTISSLV 83


>gb|AFG67415.1| hypothetical protein CL4360Contig1_02, partial [Pinus taeda]
          Length = 83

 Score = 55.8 bits (133), Expect = 8e-06
 Identities = 30/77 (38%), Positives = 45/77 (58%)
 Frame = +2

Query: 191 PQSEEEAPCLRRFSVELAKGVLEKMKGTESVLGCGRRERLRSWLKEILATTSEMERYVTF 370
           P+   E P +RRFS+EL   V +  +    ++    R  L   L+ ++ TTSEME Y TF
Sbjct: 11  PRPSREVPSIRRFSIELLIAVTKIDRSAIEMM----RSELEETLEAVMETTSEMESYSTF 66

Query: 371 SGSVGVTPHSLSMHDLV 421
           SGSVG++ H +++  LV
Sbjct: 67  SGSVGLSRHRVTISSLV 83


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