BLASTX nr result

ID: Ephedra28_contig00030288 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00030288
         (527 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEX12470.1| hypothetical protein 2_10074_01 [Pinus taeda]           60   4e-07
gb|ABK23036.1| unknown [Picea sitchensis]                              57   2e-06
gb|ADE76852.1| unknown [Picea sitchensis]                              57   3e-06

>gb|AEX12470.1| hypothetical protein 2_10074_01 [Pinus taeda]
          Length = 141

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 32/92 (34%), Positives = 48/92 (52%)
 Frame = -1

Query: 380 HYSVGDVVEAREKGCWWRGVVVWNMKNHIQNRKHAQVKQLNPQQFVVYFPANLSLKSFPS 201
           H SVGD VEA +  CWWRGV+V               +      +VVYFP   +LK++P 
Sbjct: 47  HCSVGDAVEAYDTDCWWRGVIV------------KPCEGAEEDLWVVYFPDTCTLKAYPH 94

Query: 200 FLLRPGLDWSDHNRWMLLPRLKGTPTLAEILE 105
             LRP  +W     W+L P+ + +P + E+++
Sbjct: 95  SELRPAQEWL-RGEWILAPQDR-SPVIEEVIQ 124


>gb|ABK23036.1| unknown [Picea sitchensis]
          Length = 218

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 33/117 (28%), Positives = 56/117 (47%)
 Frame = -1

Query: 380 HYSVGDVVEAREKGCWWRGVVVWNMKNHIQNRKHAQVKQLNPQQFVVYFPANLSLKSFPS 201
           H SVGD VEA +  CWWRG +V              +     + +VVYFP   +L+++P 
Sbjct: 74  HCSVGDAVEAYDTDCWWRGFIV------------KLLTGAEEELWVVYFPDTRTLEAYPR 121

Query: 200 FLLRPGLDWSDHNRWMLLPRLKGTPTLAEILEDAKAVNRIAFGTRDGADGARRVKRR 30
             LRP   W   N W+++P+ + +P + + +      N +    + G  G  + +R+
Sbjct: 122 SSLRPAQQWIRGN-WIMVPQ-ERSPIIEQEILSFTVDNSMEMPLKSGGQGVGKKRRQ 176


>gb|ADE76852.1| unknown [Picea sitchensis]
          Length = 206

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 35/115 (30%), Positives = 54/115 (46%)
 Frame = -1

Query: 374 SVGDVVEAREKGCWWRGVVVWNMKNHIQNRKHAQVKQLNPQQFVVYFPANLSLKSFPSFL 195
           SVGD VEA +  CWWRG +V              +     + +VVYFP   +LK++P   
Sbjct: 76  SVGDAVEAYDTDCWWRGFIV------------KLLTGAEEELWVVYFPDTCTLKAYPHSD 123

Query: 194 LRPGLDWSDHNRWMLLPRLKGTPTLAEILEDAKAVNRIAFGTRDGADGARRVKRR 30
           LRP  +W   N W+L P+ + T  +  +++     N        G +G  + +RR
Sbjct: 124 LRPAQEWLRGN-WILAPQERST-AIERVIQYFALENSEETHLTSGGEGDLKKRRR 176


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