BLASTX nr result

ID: Ephedra28_contig00030121 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00030121
         (445 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003598432.1| hypothetical protein MTR_3g013650 [Medicago ...    57   2e-06
ref|XP_001785880.1| predicted protein [Physcomitrella patens] gi...    57   3e-06
ref|XP_001785877.1| predicted protein [Physcomitrella patens] gi...    57   3e-06

>ref|XP_003598432.1| hypothetical protein MTR_3g013650 [Medicago truncatula]
           gi|355487480|gb|AES68683.1| hypothetical protein
           MTR_3g013650 [Medicago truncatula]
          Length = 288

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 26/66 (39%), Positives = 35/66 (53%)
 Frame = -3

Query: 200 YVFNFEFPKFERIESPIFRLLPRFPDAFK*SSQTALKGHNCQQHEWSSGRIVPCHGADPG 21
           Y+F   +  +   +   F  L      +  +  T +K     +H+WSSGRIVPCHG DPG
Sbjct: 124 YMFYTNWLSYIYFDFAWFARLVNLSQGWSSNIDTKIKARTTTKHQWSSGRIVPCHGTDPG 183

Query: 20  SIPGCC 3
           SIPG C
Sbjct: 184 SIPGWC 189


>ref|XP_001785880.1| predicted protein [Physcomitrella patens]
           gi|162662454|gb|EDQ49308.1| predicted protein
           [Physcomitrella patens]
          Length = 162

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 23/34 (67%), Positives = 26/34 (76%)
 Frame = -3

Query: 104 QTALKGHNCQQHEWSSGRIVPCHGADPGSIPGCC 3
           +T +K  N  +H WSSGRIVPCHG DPGSIPG C
Sbjct: 115 RTVVKLRNVSKHRWSSGRIVPCHGTDPGSIPGRC 148


>ref|XP_001785877.1| predicted protein [Physcomitrella patens]
           gi|162662451|gb|EDQ49305.1| predicted protein
           [Physcomitrella patens]
          Length = 263

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 23/34 (67%), Positives = 26/34 (76%)
 Frame = -3

Query: 104 QTALKGHNCQQHEWSSGRIVPCHGADPGSIPGCC 3
           +T +K  N  +H WSSGRIVPCHG DPGSIPG C
Sbjct: 216 RTVVKLRNVSKHRWSSGRIVPCHGTDPGSIPGRC 249


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