BLASTX nr result
ID: Ephedra28_contig00030079
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra28_contig00030079
(596 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004147964.1| PREDICTED: uncharacterized protein LOC101207... 94 3e-17
ref|XP_006859071.1| hypothetical protein AMTR_s00068p00201090 [A... 92 1e-16
gb|EMJ13178.1| hypothetical protein PRUPE_ppa010895mg [Prunus pe... 92 1e-16
ref|XP_002277017.1| PREDICTED: transcription initiation factor T... 92 1e-16
ref|XP_006468617.1| PREDICTED: transcription initiation factor T... 91 2e-16
ref|XP_006468615.1| PREDICTED: transcription initiation factor T... 91 2e-16
ref|XP_006468616.1| PREDICTED: transcription initiation factor T... 91 2e-16
ref|XP_002532706.1| Transcription initiation factor TFIID subuni... 90 5e-16
ref|XP_002299376.1| transcription initiation factor IID 28 kDa s... 90 5e-16
ref|XP_006448556.1| hypothetical protein CICLE_v10016661mg [Citr... 89 9e-16
ref|XP_006448555.1| hypothetical protein CICLE_v10016661mg [Citr... 89 1e-15
gb|EXB56450.1| Transcription initiation factor TFIID subunit 11 ... 88 2e-15
ref|XP_001779985.1| predicted protein [Physcomitrella patens] gi... 88 2e-15
ref|XP_006348624.1| PREDICTED: transcription initiation factor T... 88 2e-15
ref|XP_004239262.1| PREDICTED: uncharacterized protein LOC101263... 88 2e-15
ref|XP_004239004.1| PREDICTED: uncharacterized protein LOC101252... 88 2e-15
ref|NP_001043872.2| Os01g0680400 [Oryza sativa Japonica Group] g... 88 2e-15
gb|EEC71272.1| hypothetical protein OsI_03273 [Oryza sativa Indi... 88 2e-15
ref|XP_006644523.1| PREDICTED: transcription initiation factor T... 87 3e-15
ref|XP_006576141.1| PREDICTED: uncharacterized protein LOC100305... 87 3e-15
>ref|XP_004147964.1| PREDICTED: uncharacterized protein LOC101207528 [Cucumis sativus]
gi|449494264|ref|XP_004159496.1| PREDICTED:
uncharacterized protein LOC101229675 [Cucumis sativus]
Length = 220
Score = 94.0 bits (232), Expect = 3e-17
Identities = 45/62 (72%), Positives = 51/62 (82%)
Frame = -2
Query: 595 PMTIVMSGVAKMFVGELVEACRVVMTERNETGPIRPCHIREAYRRLKMDGXXXXXXXXXL 416
PMTIV+SG+AKMFVGELVE RVVMTERN+TGPIRPCH+REAYRRLK++G L
Sbjct: 159 PMTIVVSGIAKMFVGELVETARVVMTERNDTGPIRPCHLREAYRRLKLEGKIPRKSVPRL 218
Query: 415 FR 410
FR
Sbjct: 219 FR 220
>ref|XP_006859071.1| hypothetical protein AMTR_s00068p00201090 [Amborella trichopoda]
gi|548863183|gb|ERN20538.1| hypothetical protein
AMTR_s00068p00201090 [Amborella trichopoda]
Length = 185
Score = 91.7 bits (226), Expect = 1e-16
Identities = 46/62 (74%), Positives = 50/62 (80%)
Frame = -2
Query: 595 PMTIVMSGVAKMFVGELVEACRVVMTERNETGPIRPCHIREAYRRLKMDGXXXXXXXXXL 416
PMTIVMSG+AKMFVGELVE RVVMTERNE+G IRPCHIREAYRRLK++G L
Sbjct: 124 PMTIVMSGIAKMFVGELVETGRVVMTERNESGAIRPCHIREAYRRLKLEGKVPRRSRPRL 183
Query: 415 FR 410
FR
Sbjct: 184 FR 185
>gb|EMJ13178.1| hypothetical protein PRUPE_ppa010895mg [Prunus persica]
Length = 231
Score = 91.7 bits (226), Expect = 1e-16
Identities = 44/62 (70%), Positives = 50/62 (80%)
Frame = -2
Query: 595 PMTIVMSGVAKMFVGELVEACRVVMTERNETGPIRPCHIREAYRRLKMDGXXXXXXXXXL 416
PMTIV+SG+AKMFVGELVE R+VMTER E+GPIRPCHIREAYRRLK++G L
Sbjct: 170 PMTIVVSGIAKMFVGELVETARIVMTERKESGPIRPCHIREAYRRLKLEGKVPKRSMSRL 229
Query: 415 FR 410
FR
Sbjct: 230 FR 231
>ref|XP_002277017.1| PREDICTED: transcription initiation factor TFIID subunit 11 [Vitis
vinifera] gi|296086768|emb|CBI32917.3| unnamed protein
product [Vitis vinifera]
Length = 198
Score = 91.7 bits (226), Expect = 1e-16
Identities = 45/62 (72%), Positives = 49/62 (79%)
Frame = -2
Query: 595 PMTIVMSGVAKMFVGELVEACRVVMTERNETGPIRPCHIREAYRRLKMDGXXXXXXXXXL 416
PMTIV SG+AKMFVGELVE R+VMTER ETGPIRPCHIREAYRRLK++G L
Sbjct: 137 PMTIVASGIAKMFVGELVETARMVMTERKETGPIRPCHIREAYRRLKLEGKVPRRSVSRL 196
Query: 415 FR 410
FR
Sbjct: 197 FR 198
>ref|XP_006468617.1| PREDICTED: transcription initiation factor TFIID subunit 11-like
isoform X3 [Citrus sinensis]
Length = 210
Score = 91.3 bits (225), Expect = 2e-16
Identities = 44/62 (70%), Positives = 50/62 (80%)
Frame = -2
Query: 595 PMTIVMSGVAKMFVGELVEACRVVMTERNETGPIRPCHIREAYRRLKMDGXXXXXXXXXL 416
PMTIV+ G+AKMFVGELVE R+VMTERNE+GPIRPCHIREAYRRLK++G L
Sbjct: 149 PMTIVVCGIAKMFVGELVETARMVMTERNESGPIRPCHIREAYRRLKLEGKVPKRSVPRL 208
Query: 415 FR 410
FR
Sbjct: 209 FR 210
>ref|XP_006468615.1| PREDICTED: transcription initiation factor TFIID subunit 11-like
isoform X1 [Citrus sinensis]
Length = 216
Score = 91.3 bits (225), Expect = 2e-16
Identities = 44/62 (70%), Positives = 50/62 (80%)
Frame = -2
Query: 595 PMTIVMSGVAKMFVGELVEACRVVMTERNETGPIRPCHIREAYRRLKMDGXXXXXXXXXL 416
PMTIV+ G+AKMFVGELVE R+VMTERNE+GPIRPCHIREAYRRLK++G L
Sbjct: 155 PMTIVVCGIAKMFVGELVETARMVMTERNESGPIRPCHIREAYRRLKLEGKVPKRSVPRL 214
Query: 415 FR 410
FR
Sbjct: 215 FR 216
>ref|XP_006468616.1| PREDICTED: transcription initiation factor TFIID subunit 11-like
isoform X2 [Citrus sinensis]
Length = 213
Score = 90.9 bits (224), Expect = 2e-16
Identities = 41/50 (82%), Positives = 47/50 (94%)
Frame = -2
Query: 595 PMTIVMSGVAKMFVGELVEACRVVMTERNETGPIRPCHIREAYRRLKMDG 446
PMTIV+ G+AKMFVGELVE R+VMTERNE+GPIRPCHIREAYRRLK++G
Sbjct: 155 PMTIVVCGIAKMFVGELVETARMVMTERNESGPIRPCHIREAYRRLKLEG 204
>ref|XP_002532706.1| Transcription initiation factor TFIID subunit, putative [Ricinus
communis] gi|223527552|gb|EEF29673.1| Transcription
initiation factor TFIID subunit, putative [Ricinus
communis]
Length = 205
Score = 89.7 bits (221), Expect = 5e-16
Identities = 43/62 (69%), Positives = 49/62 (79%)
Frame = -2
Query: 595 PMTIVMSGVAKMFVGELVEACRVVMTERNETGPIRPCHIREAYRRLKMDGXXXXXXXXXL 416
PMTIV+ G+AKMFVGELVE R+VMTER E+GPIRPCHIREAYRRLK++G L
Sbjct: 144 PMTIVVCGIAKMFVGELVETARIVMTERKESGPIRPCHIREAYRRLKLEGKVPKRSVPRL 203
Query: 415 FR 410
FR
Sbjct: 204 FR 205
>ref|XP_002299376.1| transcription initiation factor IID 28 kDa subunit family protein
[Populus trichocarpa] gi|222846634|gb|EEE84181.1|
transcription initiation factor IID 28 kDa subunit
family protein [Populus trichocarpa]
Length = 222
Score = 89.7 bits (221), Expect = 5e-16
Identities = 43/62 (69%), Positives = 49/62 (79%)
Frame = -2
Query: 595 PMTIVMSGVAKMFVGELVEACRVVMTERNETGPIRPCHIREAYRRLKMDGXXXXXXXXXL 416
PMTIV+ G+AKMFVGELVE R+VMTER E+GPIRPCHIREAYRRLK++G L
Sbjct: 161 PMTIVVCGIAKMFVGELVETARIVMTERKESGPIRPCHIREAYRRLKLEGKVPKRSVPRL 220
Query: 415 FR 410
FR
Sbjct: 221 FR 222
>ref|XP_006448556.1| hypothetical protein CICLE_v10016661mg [Citrus clementina]
gi|557551167|gb|ESR61796.1| hypothetical protein
CICLE_v10016661mg [Citrus clementina]
Length = 216
Score = 89.0 bits (219), Expect = 9e-16
Identities = 43/62 (69%), Positives = 49/62 (79%)
Frame = -2
Query: 595 PMTIVMSGVAKMFVGELVEACRVVMTERNETGPIRPCHIREAYRRLKMDGXXXXXXXXXL 416
PMTIV+ G+AKMFVGELVE R+VM ERNE+GPIRPCHIREAYRRLK++G L
Sbjct: 155 PMTIVVCGIAKMFVGELVETARMVMMERNESGPIRPCHIREAYRRLKLEGKVPKRSVPRL 214
Query: 415 FR 410
FR
Sbjct: 215 FR 216
>ref|XP_006448555.1| hypothetical protein CICLE_v10016661mg [Citrus clementina]
gi|557551166|gb|ESR61795.1| hypothetical protein
CICLE_v10016661mg [Citrus clementina]
Length = 213
Score = 88.6 bits (218), Expect = 1e-15
Identities = 40/50 (80%), Positives = 46/50 (92%)
Frame = -2
Query: 595 PMTIVMSGVAKMFVGELVEACRVVMTERNETGPIRPCHIREAYRRLKMDG 446
PMTIV+ G+AKMFVGELVE R+VM ERNE+GPIRPCHIREAYRRLK++G
Sbjct: 155 PMTIVVCGIAKMFVGELVETARMVMMERNESGPIRPCHIREAYRRLKLEG 204
>gb|EXB56450.1| Transcription initiation factor TFIID subunit 11 [Morus notabilis]
Length = 253
Score = 88.2 bits (217), Expect = 2e-15
Identities = 41/62 (66%), Positives = 50/62 (80%)
Frame = -2
Query: 595 PMTIVMSGVAKMFVGELVEACRVVMTERNETGPIRPCHIREAYRRLKMDGXXXXXXXXXL 416
PMTIV+SG+AK+FVGELVE R+VM+ER E+GP+RPCHIREAYRRLK++G L
Sbjct: 192 PMTIVVSGIAKIFVGELVETARIVMSERKESGPVRPCHIREAYRRLKLEGKVPKRSVPRL 251
Query: 415 FR 410
FR
Sbjct: 252 FR 253
>ref|XP_001779985.1| predicted protein [Physcomitrella patens]
gi|162668590|gb|EDQ55194.1| predicted protein
[Physcomitrella patens]
Length = 102
Score = 88.2 bits (217), Expect = 2e-15
Identities = 43/62 (69%), Positives = 50/62 (80%)
Frame = -2
Query: 595 PMTIVMSGVAKMFVGELVEACRVVMTERNETGPIRPCHIREAYRRLKMDGXXXXXXXXXL 416
PMTIV+SG+AKMFVGELVE R+VMTERN+TGPIRP H+REAYRRLK++G L
Sbjct: 41 PMTIVISGIAKMFVGELVEMGRIVMTERNDTGPIRPTHLREAYRRLKLEGKVPQRNRPRL 100
Query: 415 FR 410
FR
Sbjct: 101 FR 102
>ref|XP_006348624.1| PREDICTED: transcription initiation factor TFIID subunit 11-like
isoform X1 [Solanum tuberosum]
gi|565363815|ref|XP_006348625.1| PREDICTED:
transcription initiation factor TFIID subunit 11-like
isoform X2 [Solanum tuberosum]
gi|565363817|ref|XP_006348626.1| PREDICTED:
transcription initiation factor TFIID subunit 11-like
isoform X3 [Solanum tuberosum]
Length = 210
Score = 87.8 bits (216), Expect = 2e-15
Identities = 41/62 (66%), Positives = 49/62 (79%)
Frame = -2
Query: 595 PMTIVMSGVAKMFVGELVEACRVVMTERNETGPIRPCHIREAYRRLKMDGXXXXXXXXXL 416
PMTIV+SG+AKMFVGEL+E ++VM ER +TGPIRPCHIREAYRRLK++G L
Sbjct: 149 PMTIVVSGIAKMFVGELIETAKMVMAERKDTGPIRPCHIREAYRRLKLEGKIPKKSVPRL 208
Query: 415 FR 410
FR
Sbjct: 209 FR 210
>ref|XP_004239262.1| PREDICTED: uncharacterized protein LOC101263908 [Solanum
lycopersicum]
Length = 210
Score = 87.8 bits (216), Expect = 2e-15
Identities = 41/62 (66%), Positives = 49/62 (79%)
Frame = -2
Query: 595 PMTIVMSGVAKMFVGELVEACRVVMTERNETGPIRPCHIREAYRRLKMDGXXXXXXXXXL 416
PMTIV+SG+AKMFVGEL+E ++VM ER +TGPIRPCHIREAYRRLK++G L
Sbjct: 149 PMTIVVSGIAKMFVGELIETAKMVMAERKDTGPIRPCHIREAYRRLKLEGKIPKKSVPRL 208
Query: 415 FR 410
FR
Sbjct: 209 FR 210
>ref|XP_004239004.1| PREDICTED: uncharacterized protein LOC101252686 [Solanum
lycopersicum]
Length = 210
Score = 87.8 bits (216), Expect = 2e-15
Identities = 41/62 (66%), Positives = 49/62 (79%)
Frame = -2
Query: 595 PMTIVMSGVAKMFVGELVEACRVVMTERNETGPIRPCHIREAYRRLKMDGXXXXXXXXXL 416
PMTIV+SG+AKMFVGEL+E ++VM ER +TGPIRPCHIREAYRRLK++G L
Sbjct: 149 PMTIVVSGIAKMFVGELIETAKMVMAERKDTGPIRPCHIREAYRRLKLEGKIPKKSVPRL 208
Query: 415 FR 410
FR
Sbjct: 209 FR 210
>ref|NP_001043872.2| Os01g0680400 [Oryza sativa Japonica Group]
gi|56202157|dbj|BAD73490.1| transcription initiation
factor IID p30 beta chain-like [Oryza sativa Japonica
Group] gi|56202287|dbj|BAD73746.1| transcription
initiation factor IID p30 beta chain-like [Oryza sativa
Japonica Group] gi|215695424|dbj|BAG90663.1| unnamed
protein product [Oryza sativa Japonica Group]
gi|222619047|gb|EEE55179.1| hypothetical protein
OsJ_03014 [Oryza sativa Japonica Group]
gi|255673555|dbj|BAF05786.2| Os01g0680400 [Oryza sativa
Japonica Group]
Length = 211
Score = 87.8 bits (216), Expect = 2e-15
Identities = 41/62 (66%), Positives = 49/62 (79%)
Frame = -2
Query: 595 PMTIVMSGVAKMFVGELVEACRVVMTERNETGPIRPCHIREAYRRLKMDGXXXXXXXXXL 416
P TIV+SG+AKMFVGELVE R+VMTER ++GP+RPCHIREAYRRLK++G L
Sbjct: 150 PTTIVVSGIAKMFVGELVETARIVMTERKDSGPVRPCHIREAYRRLKLEGKIPRRTVPRL 209
Query: 415 FR 410
FR
Sbjct: 210 FR 211
>gb|EEC71272.1| hypothetical protein OsI_03273 [Oryza sativa Indica Group]
Length = 210
Score = 87.8 bits (216), Expect = 2e-15
Identities = 41/62 (66%), Positives = 49/62 (79%)
Frame = -2
Query: 595 PMTIVMSGVAKMFVGELVEACRVVMTERNETGPIRPCHIREAYRRLKMDGXXXXXXXXXL 416
P TIV+SG+AKMFVGELVE R+VMTER ++GP+RPCHIREAYRRLK++G L
Sbjct: 149 PTTIVVSGIAKMFVGELVETARIVMTERKDSGPVRPCHIREAYRRLKLEGKIPRRTVPRL 208
Query: 415 FR 410
FR
Sbjct: 209 FR 210
>ref|XP_006644523.1| PREDICTED: transcription initiation factor TFIID subunit 11-like
[Oryza brachyantha]
Length = 188
Score = 87.4 bits (215), Expect = 3e-15
Identities = 40/62 (64%), Positives = 49/62 (79%)
Frame = -2
Query: 595 PMTIVMSGVAKMFVGELVEACRVVMTERNETGPIRPCHIREAYRRLKMDGXXXXXXXXXL 416
P TIV+SG+AKMFVGEL+E R+VMTER ++GP+RPCHIREAYRRLK++G L
Sbjct: 127 PTTIVVSGIAKMFVGELIETARIVMTERKDSGPVRPCHIREAYRRLKLEGKIPRRTVPRL 186
Query: 415 FR 410
FR
Sbjct: 187 FR 188
>ref|XP_006576141.1| PREDICTED: uncharacterized protein LOC100305481 isoform X1 [Glycine
max]
Length = 202
Score = 87.4 bits (215), Expect = 3e-15
Identities = 41/62 (66%), Positives = 49/62 (79%)
Frame = -2
Query: 595 PMTIVMSGVAKMFVGELVEACRVVMTERNETGPIRPCHIREAYRRLKMDGXXXXXXXXXL 416
PMTIV+SG+AKMFVGE+VE R+VM ER E+GPIRPCH+REAYRRLK++G L
Sbjct: 141 PMTIVVSGIAKMFVGEVVETARIVMKERKESGPIRPCHLREAYRRLKLEGKVFKRSSSRL 200
Query: 415 FR 410
FR
Sbjct: 201 FR 202