BLASTX nr result
ID: Ephedra28_contig00029960
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Ephedra28_contig00029960 (623 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|EPS67278.1| hypothetical protein M569_07494 [Genlisea aurea] 83 7e-14 gb|EMJ09267.1| hypothetical protein PRUPE_ppa001736mg [Prunus pe... 82 1e-13 ref|NP_001059290.1| Os07g0249100 [Oryza sativa Japonica Group] g... 81 2e-13 gb|EEE66889.1| hypothetical protein OsJ_23712 [Oryza sativa Japo... 81 2e-13 gb|EAZ03379.1| hypothetical protein OsI_25524 [Oryza sativa Indi... 81 2e-13 ref|XP_004508428.1| PREDICTED: pentatricopeptide repeat-containi... 80 4e-13 ref|NP_001031033.1| pentatricopeptide repeat-containing protein ... 80 4e-13 gb|ADE76539.1| unknown [Picea sitchensis] 80 5e-13 ref|XP_003617308.1| Auxin response factor [Medicago truncatula] ... 80 6e-13 ref|XP_004955898.1| PREDICTED: pentatricopeptide repeat-containi... 79 8e-13 gb|EOY22621.1| Pentatricopeptide repeat superfamily protein, put... 79 8e-13 ref|XP_004305215.1| PREDICTED: pentatricopeptide repeat-containi... 79 8e-13 ref|XP_006658440.1| PREDICTED: pentatricopeptide repeat-containi... 79 1e-12 ref|XP_004978355.1| PREDICTED: pentatricopeptide repeat-containi... 78 2e-12 ref|XP_004249774.1| PREDICTED: pentatricopeptide repeat-containi... 78 2e-12 ref|XP_002461759.1| hypothetical protein SORBIDRAFT_02g007610 [S... 78 2e-12 ref|XP_006382761.1| hypothetical protein POPTR_0005s05170g [Popu... 78 2e-12 ref|XP_006857565.1| hypothetical protein AMTR_s00061p00066220 [A... 78 2e-12 ref|XP_002869525.1| pentatricopeptide repeat-containing protein ... 77 3e-12 ref|XP_003518493.2| PREDICTED: pentatricopeptide repeat-containi... 77 4e-12 >gb|EPS67278.1| hypothetical protein M569_07494 [Genlisea aurea] Length = 771 Score = 82.8 bits (203), Expect = 7e-14 Identities = 44/148 (29%), Positives = 81/148 (54%), Gaps = 1/148 (0%) Frame = -3 Query: 621 FDILIEGFCNEGKVHKGLELLDSAIERREPAKAKSYEALVDAFCNEGRFREAASVMERML 442 ++ILI+ CN+GK+ + + +L P Y L+D FC + EA + +R+ Sbjct: 457 YNILIDSLCNKGKLSEAMVILKDMESSGCPRGVTCYNILIDGFCKRKKIEEAEEIFDRIE 516 Query: 441 RRPLTINSNSIYNRLIDGLCKQGQVFESCIILDDMVKDSLTPDPYVWNTLVSCVCRKRLL 262 L+ N+ + YN LIDGLCK +V ++ +++ MV + L PD + +N+L+S +C+ + Sbjct: 517 LEGLSRNT-ATYNTLIDGLCKCNRVEDASLLMHQMVMEGLKPDEFTYNSLLSYLCKVGDI 575 Query: 261 RNRVVELSKIVA*AFE-DLILHWESIEG 181 +N L + + E D + + + I+G Sbjct: 576 KNAADVLQTMASNGCEPDAVTYGKLIQG 603 Score = 64.7 bits (156), Expect = 2e-08 Identities = 36/127 (28%), Positives = 60/127 (47%) Frame = -3 Query: 621 FDILIEGFCNEGKVHKGLELLDSAIERREPAKAKSYEALVDAFCNEGRFREAASVMERML 442 ++ I GFC +G+V K +++LD + R A +Y+ L+ F E R EA + R+L Sbjct: 352 YNAAICGFCEKGEVGKAVQVLDRMMSRNCYPNAATYDVLISGFIKENRIEEATE-LSRVL 410 Query: 441 RRPLTINSNSIYNRLIDGLCKQGQVFESCIILDDMVKDSLTPDPYVWNTLVSCVCRKRLL 262 + S +N L+ G C G + + +M PD + +N L+ +C K L Sbjct: 411 TSKGILPDVSTFNTLLRGQCLSGSHTSAMELFSEMKSKGCKPDEFTYNILIDSLCNKGKL 470 Query: 261 RNRVVEL 241 +V L Sbjct: 471 SEAMVIL 477 Score = 60.5 bits (145), Expect = 4e-07 Identities = 31/116 (26%), Positives = 55/116 (47%) Frame = -3 Query: 621 FDILIEGFCNEGKVHKGLELLDSAIERREPAKAKSYEALVDAFCNEGRFREAASVMERML 442 ++ILI+GFC K+ + E+ D +Y L+D C R +A+ +M +M+ Sbjct: 492 YNILIDGFCKRKKIEEAEEIFDRIELEGLSRNTATYNTLIDGLCKCNRVEDASLLMHQMV 551 Query: 441 RRPLTINSNSIYNRLIDGLCKQGQVFESCIILDDMVKDSLTPDPYVWNTLVSCVCR 274 L + + YN L+ LCK G + + +L M + PD + L+ +C+ Sbjct: 552 MEGLKPDEFT-YNSLLSYLCKVGDIKNAADVLQTMASNGCEPDAVTYGKLIQGLCK 606 Score = 58.2 bits (139), Expect = 2e-06 Identities = 34/132 (25%), Positives = 60/132 (45%) Frame = -3 Query: 621 FDILIEGFCNEGKVHKGLELLDSAIERREPAKAKSYEALVDAFCNEGRFREAASVMERML 442 + ++EG+ EG + L + + I + + + LVD FC G EA ++ M+ Sbjct: 249 YTTIMEGYIEEGNLEGALRVREQMIASQCFSSEVTVNVLVDGFCKHGMIEEALVFLQEMV 308 Query: 441 RRPLTINSNSIYNRLIDGLCKQGQVFESCIILDDMVKDSLTPDPYVWNTLVSCVCRKRLL 262 +N LI GLCK+G V + L+ M+ + PD Y +N + C K + Sbjct: 309 ANEGFYPDRFTFNTLIGGLCKEGHVDHA---LELMLHEGFDPDVYSYNAAICGFCEKGEV 365 Query: 261 RNRVVELSKIVA 226 V L ++++ Sbjct: 366 GKAVQVLDRMMS 377 Score = 56.6 bits (135), Expect = 6e-06 Identities = 35/115 (30%), Positives = 56/115 (48%) Frame = -3 Query: 621 FDILIEGFCNEGKVHKGLELLDSAIERREPAKAKSYEALVDAFCNEGRFREAASVMERML 442 F+ LI G C EG V LEL+ + SY A + FC +G +A V++RM+ Sbjct: 320 FNTLIGGLCKEGHVDHALELM---LHEGFDPDVYSYNAAICGFCEKGEVGKAVQVLDRMM 376 Query: 441 RRPLTINSNSIYNRLIDGLCKQGQVFESCIILDDMVKDSLTPDPYVWNTLVSCVC 277 R N+ + Y+ LI G K+ ++ E+ + + + PD +NTL+ C Sbjct: 377 SRNCYPNA-ATYDVLISGFIKENRIEEATELSRVLTSKGILPDVSTFNTLLRGQC 430 >gb|EMJ09267.1| hypothetical protein PRUPE_ppa001736mg [Prunus persica] Length = 772 Score = 82.0 bits (201), Expect = 1e-13 Identities = 42/129 (32%), Positives = 71/129 (55%) Frame = -3 Query: 618 DILIEGFCNEGKVHKGLELLDSAIERREPAKAKSYEALVDAFCNEGRFREAASVMERMLR 439 ++L+ GFC EGKV + L ++ ++ LV C G + A +M+ ML+ Sbjct: 283 NVLVNGFCKEGKVEEALSFIEKMSNEGFSPDQFTFNTLVKGLCRVGHVKHALEIMDVMLQ 342 Query: 438 RPLTINSNSIYNRLIDGLCKQGQVFESCIILDDMVKDSLTPDPYVWNTLVSCVCRKRLLR 259 + ++ + YN L+ GLCK G++ E+ ILD MV +P+ +NTL+S +C++ Sbjct: 343 QGFDLDIYT-YNSLVSGLCKLGEIEEAVEILDQMVSRDCSPNTVTYNTLISTLCKE---- 397 Query: 258 NRVVELSKI 232 NRV E +K+ Sbjct: 398 NRVEEATKL 406 Score = 73.2 bits (178), Expect = 6e-11 Identities = 36/116 (31%), Positives = 65/116 (56%) Frame = -3 Query: 621 FDILIEGFCNEGKVHKGLELLDSAIERREPAKAKSYEALVDAFCNEGRFREAASVMERML 442 + +LI+ +C+ G++ + L LL R Y L+D C R +A + ++M Sbjct: 457 YSMLIDSYCSRGRLKEALNLLKEMELRGCARNVVIYNTLIDGLCKNKRIEDAEEIFDQME 516 Query: 441 RRPLTINSNSIYNRLIDGLCKQGQVFESCIILDDMVKDSLTPDPYVWNTLVSCVCR 274 + ++ NS + YN LIDGLC+ +V E+ ++D M+ + L PD + +N+L++ CR Sbjct: 517 LQGISRNSVT-YNILIDGLCQSRRVEEASQLMDQMIIEGLKPDKFTYNSLLTYFCR 571 Score = 69.7 bits (169), Expect = 6e-10 Identities = 40/132 (30%), Positives = 69/132 (52%) Frame = -3 Query: 621 FDILIEGFCNEGKVHKGLELLDSAIERREPAKAKSYEALVDAFCNEGRFREAASVMERML 442 F L++G+ EG + L + D +E P + LV+ FC EG+ EA S +E+M Sbjct: 247 FTTLMQGYIEEGDMKGALRMRDQMVEYGCPWTNVTINVLVNGFCKEGKVEEALSFIEKMS 306 Query: 441 RRPLTINSNSIYNRLIDGLCKQGQVFESCIILDDMVKDSLTPDPYVWNTLVSCVCRKRLL 262 + + + +N L+ GLC+ G V + I+D M++ D Y +N+LVS +C+ + Sbjct: 307 NEGFSPDQFT-FNTLVKGLCRVGHVKHALEIMDVMLQQGFDLDIYTYNSLVSGLCKLGEI 365 Query: 261 RNRVVELSKIVA 226 V L ++V+ Sbjct: 366 EEAVEILDQMVS 377 Score = 60.1 bits (144), Expect = 5e-07 Identities = 33/118 (27%), Positives = 60/118 (50%), Gaps = 2/118 (1%) Frame = -3 Query: 621 FDILIEGFCNEGKVHKGLELLDSAIERREPAKAKSYEALVDAFCNEGRFREAASVMERML 442 F+ILI+ C ++ L L++ K++ L+ + EG + A + ++M+ Sbjct: 212 FNILIKALCRAHQIRPALLLMEEMSNHGLSPDEKTFTTLMQGYIEEGDMKGALRMRDQMV 271 Query: 441 RR--PLTINSNSIYNRLIDGLCKQGQVFESCIILDDMVKDSLTPDPYVWNTLVSCVCR 274 P T N N L++G CK+G+V E+ ++ M + +PD + +NTLV +CR Sbjct: 272 EYGCPWT---NVTINVLVNGFCKEGKVEEALSFIEKMSNEGFSPDQFTFNTLVKGLCR 326 Score = 58.5 bits (140), Expect = 1e-06 Identities = 32/97 (32%), Positives = 56/97 (57%) Frame = -3 Query: 519 SYEALVDAFCNEGRFREAASVMERMLRRPLTINSNSIYNRLIDGLCKQGQVFESCIILDD 340 +Y L+D++C+ GR +EA ++++ M R N IYN LIDGLCK ++ ++ I D Sbjct: 456 TYSMLIDSYCSRGRLKEALNLLKEMELRGCARNV-VIYNTLIDGLCKNKRIEDAEEIFDQ 514 Query: 339 MVKDSLTPDPYVWNTLVSCVCRKRLLRNRVVELSKIV 229 M ++ + +N L+ +C+ R RV E S+++ Sbjct: 515 MELQGISRNSVTYNILIDGLCQSR----RVEEASQLM 547 Score = 57.4 bits (137), Expect = 3e-06 Identities = 35/125 (28%), Positives = 64/125 (51%), Gaps = 7/125 (5%) Frame = -3 Query: 621 FDILIEGFCNEGKVHKGLELLDS-AIERREPAKAKSYEALVDAFCNEGRFREAASVMERM 445 ++ILI+G C +V + +L+D IE +P K +Y +L+ FC G ++AA +++ Sbjct: 527 YNILIDGLCQSRRVEEASQLMDQMIIEGLKPDKF-TYNSLLTYFCRAGDIKKAADIVQ-- 583 Query: 444 LRRPLTINSNS------IYNRLIDGLCKQGQVFESCIILDDMVKDSLTPDPYVWNTLVSC 283 T+ SN Y LI GLCK G++ + +L + L P P +N ++ Sbjct: 584 -----TMTSNGCEPDIVTYGTLIGGLCKAGRIQVASRLLRSLQMKGLVPSPQAYNPVIQS 638 Query: 282 VCRKR 268 + +++ Sbjct: 639 LFKRK 643 >ref|NP_001059290.1| Os07g0249100 [Oryza sativa Japonica Group] gi|33146978|dbj|BAC80051.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza sativa Japonica Group] gi|50508482|dbj|BAD30659.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza sativa Japonica Group] gi|113610826|dbj|BAF21204.1| Os07g0249100 [Oryza sativa Japonica Group] gi|215767773|dbj|BAH00002.1| unnamed protein product [Oryza sativa Japonica Group] Length = 882 Score = 81.3 bits (199), Expect = 2e-13 Identities = 40/125 (32%), Positives = 70/125 (56%) Frame = -3 Query: 621 FDILIEGFCNEGKVHKGLELLDSAIERREPAKAKSYEALVDAFCNEGRFREAASVMERML 442 ++ +++GFC GKVHK E+L+ E+ +Y A+VD R EA + E Sbjct: 601 YNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAK 660 Query: 441 RRPLTINSNSIYNRLIDGLCKQGQVFESCIILDDMVKDSLTPDPYVWNTLVSCVCRKRLL 262 + + +N +Y+ LIDG K G++ E+ +IL++M+K LTP+ Y WN+L+ + + + Sbjct: 661 SKGIELNV-VLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEI 719 Query: 261 RNRVV 247 +V Sbjct: 720 NEALV 724 >gb|EEE66889.1| hypothetical protein OsJ_23712 [Oryza sativa Japonica Group] Length = 579 Score = 81.3 bits (199), Expect = 2e-13 Identities = 40/125 (32%), Positives = 70/125 (56%) Frame = -3 Query: 621 FDILIEGFCNEGKVHKGLELLDSAIERREPAKAKSYEALVDAFCNEGRFREAASVMERML 442 ++ +++GFC GKVHK E+L+ E+ +Y A+VD R EA + E Sbjct: 335 YNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAK 394 Query: 441 RRPLTINSNSIYNRLIDGLCKQGQVFESCIILDDMVKDSLTPDPYVWNTLVSCVCRKRLL 262 + + +N +Y+ LIDG K G++ E+ +IL++M+K LTP+ Y WN+L+ + + + Sbjct: 395 SKGIELNV-VLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEI 453 Query: 261 RNRVV 247 +V Sbjct: 454 NEALV 458 >gb|EAZ03379.1| hypothetical protein OsI_25524 [Oryza sativa Indica Group] Length = 716 Score = 81.3 bits (199), Expect = 2e-13 Identities = 40/125 (32%), Positives = 70/125 (56%) Frame = -3 Query: 621 FDILIEGFCNEGKVHKGLELLDSAIERREPAKAKSYEALVDAFCNEGRFREAASVMERML 442 ++ +++GFC GKVHK E+L+ E+ +Y A+VD R EA + E Sbjct: 467 YNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAK 526 Query: 441 RRPLTINSNSIYNRLIDGLCKQGQVFESCIILDDMVKDSLTPDPYVWNTLVSCVCRKRLL 262 + + +N +Y+ LIDG K G++ E+ +IL++M+K LTP+ Y WN+L+ + + + Sbjct: 527 SKGIELNV-VLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEI 585 Query: 261 RNRVV 247 +V Sbjct: 586 NEALV 590 >ref|XP_004508428.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320, mitochondrial-like isoform X1 [Cicer arietinum] gi|502151414|ref|XP_004508429.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320, mitochondrial-like isoform X2 [Cicer arietinum] gi|502151416|ref|XP_004508430.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320, mitochondrial-like isoform X3 [Cicer arietinum] gi|502151418|ref|XP_004508431.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320, mitochondrial-like isoform X4 [Cicer arietinum] Length = 712 Score = 80.5 bits (197), Expect = 4e-13 Identities = 39/116 (33%), Positives = 67/116 (57%) Frame = -3 Query: 621 FDILIEGFCNEGKVHKGLELLDSAIERREPAKAKSYEALVDAFCNEGRFREAASVMERML 442 F+I+I+G C +G + LE L+ +E+ +Y L++ FC +GR EAA V+ M Sbjct: 383 FNIMIDGLCKKGYLVSALEFLNEMVEKGFEPNVITYTILINGFCKQGRLEEAAEVVNNMS 442 Query: 441 RRPLTINSNSIYNRLIDGLCKQGQVFESCIILDDMVKDSLTPDPYVWNTLVSCVCR 274 + L++N+ YN LI LCK G++ ++ + D+M PD Y +N+L+ +C+ Sbjct: 443 AKGLSLNTVG-YNCLICALCKDGKIQDALQMYDEMSSKGCKPDIYTFNSLIYGLCK 497 Score = 72.8 bits (177), Expect = 7e-11 Identities = 45/146 (30%), Positives = 72/146 (49%) Frame = -3 Query: 612 LIEGFCNEGKVHKGLELLDSAIERREPAKAKSYEALVDAFCNEGRFREAASVMERMLRRP 433 LI+ C G + KGL LL+ + + S L+++FC G+ EA + M+ R Sbjct: 561 LIKALCKTGAIEKGLGLLEEMLGKGIFPSINSCNILINSFCRIGKVNEALQFLRDMIHRG 620 Query: 432 LTINSNSIYNRLIDGLCKQGQVFESCIILDDMVKDSLTPDPYVWNTLVSCVCRKRLLRNR 253 LT + + YN LI+GLCK G+V E+ + + + + PD +NTL+S C + L Sbjct: 621 LTPDIVT-YNCLINGLCKTGRVQEALNLFNRLQAEGTRPDAVTYNTLISRYCYEGLFNEA 679 Query: 252 VVELSKIVA*AFEDLILHWESIEGHF 175 + L K V F + W + +F Sbjct: 680 CLLLYKGVNNGFIPNEITWSILISYF 705 Score = 64.7 bits (156), Expect = 2e-08 Identities = 37/116 (31%), Positives = 57/116 (49%) Frame = -3 Query: 618 DILIEGFCNEGKVHKGLELLDSAIERREPAKAKSYEALVDAFCNEGRFREAASVMERMLR 439 +ILI FC GKV++ L+ L I R +Y L++ C GR +EA ++ R L+ Sbjct: 594 NILINSFCRIGKVNEALQFLRDMIHRGLTPDIVTYNCLINGLCKTGRVQEALNLFNR-LQ 652 Query: 438 RPLTINSNSIYNRLIDGLCKQGQVFESCIILDDMVKDSLTPDPYVWNTLVSCVCRK 271 T YN LI C +G E+C++L V + P+ W+ L+S +K Sbjct: 653 AEGTRPDAVTYNTLISRYCYEGLFNEACLLLYKGVNNGFIPNEITWSILISYFVKK 708 Score = 62.8 bits (151), Expect = 8e-08 Identities = 39/141 (27%), Positives = 75/141 (53%), Gaps = 1/141 (0%) Frame = -3 Query: 621 FDILIEGFCNEGKVHKGLELLDSAIERREPAKAKSYEALVDAFCNEGRFREAASVMERML 442 F+ +I G C G++H+ +LLD + R A A Y L+ C G+ EA +++ + + Sbjct: 281 FNDVIHGLCRAGRIHEAAKLLDRMLLRGFAADALIYGYLMHGLCRMGQVDEARALLNK-I 339 Query: 441 RRPLTINSNSIYNRLIDGLCKQGQVFES-CIILDDMVKDSLTPDPYVWNTLVSCVCRKRL 265 P T+ +YN LI+G G+ E+ ++ ++MV PD + +N ++ +C+K Sbjct: 340 PNPNTV----LYNTLINGYVVSGRFEEAKDLLYNNMVIAGYEPDAFTFNIMIDGLCKKGY 395 Query: 264 LRNRVVELSKIVA*AFEDLIL 202 L + + L+++V FE ++ Sbjct: 396 LVSALEFLNEMVEKGFEPNVI 416 >ref|NP_001031033.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana] gi|75178969|sp|Q9LPX2.1|PPR39_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g12775, mitochondrial; Flags: Precursor gi|8698724|gb|AAF78482.1|AC012187_2 Contains similarity to an unknown protein F16M19.7 gi|6598837 from Arabidopsis thaliana BAC F16M19 gb|AC010795 and contains multiple PPR PF|01535 repeats. EST gb|AI999079 comes from this gene [Arabidopsis thaliana] gi|332190806|gb|AEE28927.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana] Length = 644 Score = 80.5 bits (197), Expect = 4e-13 Identities = 39/116 (33%), Positives = 69/116 (59%) Frame = -3 Query: 621 FDILIEGFCNEGKVHKGLELLDSAIERREPAKAKSYEALVDAFCNEGRFREAASVMERML 442 ++ LI GFCN G+ G +LL I+R+ ++ L+D+F EG+ REA +++ M+ Sbjct: 301 YNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMM 360 Query: 441 RRPLTINSNSIYNRLIDGLCKQGQVFESCIILDDMVKDSLTPDPYVWNTLVSCVCR 274 +R + N+ + YN LIDG CK+ ++ E+ ++D M+ PD +N L++ C+ Sbjct: 361 QRGIAPNTIT-YNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCK 415 Score = 65.9 bits (159), Expect = 9e-09 Identities = 31/124 (25%), Positives = 67/124 (54%) Frame = -3 Query: 621 FDILIEGFCNEGKVHKGLELLDSAIERREPAKAKSYEALVDAFCNEGRFREAASVMERML 442 + I+I+G C +G + L + + A +Y L+ FCN GR+ + A ++ M+ Sbjct: 266 YSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMI 325 Query: 441 RRPLTINSNSIYNRLIDGLCKQGQVFESCIILDDMVKDSLTPDPYVWNTLVSCVCRKRLL 262 +R ++ N + ++ LID K+G++ E+ +L +M++ + P+ +N+L+ C++ L Sbjct: 326 KRKISPNVVT-FSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRL 384 Query: 261 RNRV 250 + Sbjct: 385 EEAI 388 Score = 58.9 bits (141), Expect = 1e-06 Identities = 33/115 (28%), Positives = 56/115 (48%) Frame = -3 Query: 621 FDILIEGFCNEGKVHKGLELLDSAIERREPAKAKSYEALVDAFCNEGRFREAASVMERML 442 F+ILI G+C ++ GLEL R A +Y LV FC G+ A + + M+ Sbjct: 406 FNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMV 465 Query: 441 RRPLTINSNSIYNRLIDGLCKQGQVFESCIILDDMVKDSLTPDPYVWNTLVSCVC 277 R + + S Y L+DGLC G++ ++ I + K + D ++ ++ +C Sbjct: 466 SRRVRPDIVS-YKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMC 519 Score = 57.4 bits (137), Expect = 3e-06 Identities = 28/117 (23%), Positives = 58/117 (49%) Frame = -3 Query: 621 FDILIEGFCNEGKVHKGLELLDSAIERREPAKAKSYEALVDAFCNEGRFREAASVMERML 442 ++ L++GFC GK+ +L + RR SY+ L+D C+ G +A + ++ Sbjct: 441 YNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIE 500 Query: 441 RRPLTINSNSIYNRLIDGLCKQGQVFESCIILDDMVKDSLTPDPYVWNTLVSCVCRK 271 + + ++ IY +I G+C +V ++ + + + D +N ++S +CRK Sbjct: 501 KSKMELDIG-IYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRK 556 Score = 56.2 bits (134), Expect = 7e-06 Identities = 29/130 (22%), Positives = 62/130 (47%) Frame = -3 Query: 621 FDILIEGFCNEGKVHKGLELLDSAIERREPAKAKSYEALVDAFCNEGRFREAASVMERML 442 ++ LI+GFC E ++ + ++++D I + ++ L++ +C R + + M Sbjct: 371 YNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMS 430 Query: 441 RRPLTINSNSIYNRLIDGLCKQGQVFESCIILDDMVKDSLTPDPYVWNTLVSCVCRKRLL 262 R + N+ + YN L+ G C+ G++ + + +MV + PD + L+ +C L Sbjct: 431 LRGVIANTVT-YNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGEL 489 Query: 261 RNRVVELSKI 232 + KI Sbjct: 490 EKALEIFGKI 499 >gb|ADE76539.1| unknown [Picea sitchensis] Length = 486 Score = 80.1 bits (196), Expect = 5e-13 Identities = 43/115 (37%), Positives = 62/115 (53%) Frame = -3 Query: 621 FDILIEGFCNEGKVHKGLELLDSAIERREPAKAKSYEALVDAFCNEGRFREAASVMERML 442 ++ +I GFC EG+ ++L E A SY LV+ CNEG+F EA +E M+ Sbjct: 346 YNTVITGFCREGRALDACQILRDMPENGCLPNALSYRTLVNGLCNEGKFDEAKDFVEEMI 405 Query: 441 RRPLTINSNSIYNRLIDGLCKQGQVFESCIILDDMVKDSLTPDPYVWNTLVSCVC 277 I SIY+ LI GLC +G+V E+C +L M K +L P W+ L+ +C Sbjct: 406 SNGF-IPHISIYHLLITGLCNEGKVGEACEVLVMMTKQTLAPHESTWSVLLMRIC 459 Score = 67.0 bits (162), Expect = 4e-09 Identities = 34/118 (28%), Positives = 66/118 (55%), Gaps = 1/118 (0%) Frame = -3 Query: 621 FDILIEGFCNEGKVHKGLELLDSAIERREPAKAKSYEALVDAFCNEGRFREAASVMERML 442 + IL++G C + +V L +LD + + A +Y L+++ C + REA ++ +M Sbjct: 276 YSILMQGLCRKSQVKTALGVLDEMLNKGYVPDALTYNTLLNSLCRKMNLREAYRLLSKM- 334 Query: 441 RRPLTINSNSI-YNRLIDGLCKQGQVFESCIILDDMVKDSLTPDPYVWNTLVSCVCRK 271 + + N + I YN +I G C++G+ ++C IL DM ++ P+ + TLV+ +C + Sbjct: 335 -KVMGCNPDVINYNTVITGFCREGRALDACQILRDMPENGCLPNALSYRTLVNGLCNE 391 Score = 56.2 bits (134), Expect = 7e-06 Identities = 38/128 (29%), Positives = 61/128 (47%) Frame = -3 Query: 615 ILIEGFCNEGKVHKGLELLDSAIERREPAKAKSYEALVDAFCNEGRFREAASVMERMLRR 436 +LIE C E L L E ++Y L+ A C+ + A + +M ++ Sbjct: 212 VLIEHKCLE----TALSLFKKLHEFGISPNTRTYNILIRAHCHSDKLSHAYFLFNKMHKQ 267 Query: 435 PLTINSNSIYNRLIDGLCKQGQVFESCIILDDMVKDSLTPDPYVWNTLVSCVCRKRLLRN 256 I Y+ L+ GLC++ QV + +LD+M+ PD +NTL++ +CRK LR Sbjct: 268 GC-IPDVETYSILMQGLCRKSQVKTALGVLDEMLNKGYVPDALTYNTLLNSLCRKMNLRE 326 Query: 255 RVVELSKI 232 LSK+ Sbjct: 327 AYRLLSKM 334 >ref|XP_003617308.1| Auxin response factor [Medicago truncatula] gi|355518643|gb|AET00267.1| Auxin response factor [Medicago truncatula] Length = 948 Score = 79.7 bits (195), Expect = 6e-13 Identities = 38/116 (32%), Positives = 66/116 (56%) Frame = -3 Query: 621 FDILIEGFCNEGKVHKGLELLDSAIERREPAKAKSYEALVDAFCNEGRFREAASVMERML 442 F+I+I+G C +G + LE LD +++ +Y L+D FC +G F EA+ V+ M Sbjct: 375 FNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMS 434 Query: 441 RRPLTINSNSIYNRLIDGLCKQGQVFESCIILDDMVKDSLTPDPYVWNTLVSCVCR 274 + L++N+ YN LI LCK G++ ++ + +M PD Y +N+L+ +C+ Sbjct: 435 AKGLSLNTVG-YNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCK 489 Score = 66.2 bits (160), Expect = 7e-09 Identities = 41/146 (28%), Positives = 69/146 (47%) Frame = -3 Query: 612 LIEGFCNEGKVHKGLELLDSAIERREPAKAKSYEALVDAFCNEGRFREAASVMERMLRRP 433 LI+ C G K L L++ S L+++FC G+ +A + M++R Sbjct: 553 LIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMIQRG 612 Query: 432 LTINSNSIYNRLIDGLCKQGQVFESCIILDDMVKDSLTPDPYVWNTLVSCVCRKRLLRNR 253 LT + + YN LI+GLCK G+ E+ + + + + PD +NTL+S C + L + Sbjct: 613 LTPDIVT-YNSLINGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLISRYCYEGLFNDA 671 Query: 252 VVELSKIVA*AFEDLILHWESIEGHF 175 L K V+ F + W + +F Sbjct: 672 CQLLFKGVSNGFIPNEITWSILINYF 697 Score = 60.8 bits (146), Expect = 3e-07 Identities = 32/111 (28%), Positives = 58/111 (52%) Frame = -3 Query: 618 DILIEGFCNEGKVHKGLELLDSAIERREPAKAKSYEALVDAFCNEGRFREAASVMERMLR 439 +ILI FC GKV+ L+ L I+R +Y +L++ C GRF+EA ++ + Sbjct: 586 NILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEALNLFNGLQA 645 Query: 438 RPLTINSNSIYNRLIDGLCKQGQVFESCIILDDMVKDSLTPDPYVWNTLVS 286 + + ++ + YN LI C +G ++C +L V + P+ W+ L++ Sbjct: 646 KGIHPDAVT-YNTLISRYCYEGLFNDACQLLFKGVSNGFIPNEITWSILIN 695 Score = 58.2 bits (139), Expect = 2e-06 Identities = 41/156 (26%), Positives = 77/156 (49%), Gaps = 7/156 (4%) Frame = -3 Query: 621 FDILIEGFCNEGKVHKGLELLDSAIERREPAKAKSYEALVDAFCNEGRFREAASVMERML 442 F+ +I G C G++H+ +L D + R A A L+ C G+ EA +++ + + Sbjct: 273 FNDVIHGLCKAGRIHEAAKLHDRMLLRDFTADALIQGYLMHGLCRMGKVDEARAMLSK-I 331 Query: 441 RRPLTINSNSIYNRLIDGLCKQGQVFESCIIL-DDMVKDSLTPDPYVWNTLVSCVCRKRL 265 P T+ +YN LI+G G+ E+ +L +MV PD + +N ++ +C+K Sbjct: 332 PNPNTV----LYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGY 387 Query: 264 LRNRVVELSKIVA*AFEDLILHWESI------EGHF 175 L + + L ++V FE ++ + + +GHF Sbjct: 388 LVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHF 423 >ref|XP_004955898.1| PREDICTED: pentatricopeptide repeat-containing protein At3g06920-like isoform X1 [Setaria italica] gi|514726112|ref|XP_004955899.1| PREDICTED: pentatricopeptide repeat-containing protein At3g06920-like isoform X2 [Setaria italica] Length = 881 Score = 79.3 bits (194), Expect = 8e-13 Identities = 37/125 (29%), Positives = 70/125 (56%) Frame = -3 Query: 621 FDILIEGFCNEGKVHKGLELLDSAIERREPAKAKSYEALVDAFCNEGRFREAASVMERML 442 ++ +++GFC GKV K E+L+ +R P +Y +++D R EA + E Sbjct: 600 YNAVVDGFCKSGKVDKAYEVLEEMKVKRVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAK 659 Query: 441 RRPLTINSNSIYNRLIDGLCKQGQVFESCIILDDMVKDSLTPDPYVWNTLVSCVCRKRLL 262 + + +N +Y+ LIDG K G++ E+ +IL++M+K LTP+ Y WN+L+ + + + Sbjct: 660 SKGIELNV-IVYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEI 718 Query: 261 RNRVV 247 ++ Sbjct: 719 NEALI 723 >gb|EOY22621.1| Pentatricopeptide repeat superfamily protein, putative isoform 1 [Theobroma cacao] gi|508775366|gb|EOY22622.1| Pentatricopeptide repeat superfamily protein, putative isoform 1 [Theobroma cacao] Length = 1021 Score = 79.3 bits (194), Expect = 8e-13 Identities = 44/116 (37%), Positives = 63/116 (54%) Frame = -3 Query: 621 FDILIEGFCNEGKVHKGLELLDSAIERREPAKAKSYEALVDAFCNEGRFREAASVMERML 442 ++++I G C G V + L+L S E+ A +Y L+D FC E RF EA +M M Sbjct: 258 YNVMIGGLCRAGVVDEALKLKKSMAEKGFAPDAYTYNTLIDGFCREKRFSEAKLMMTEMR 317 Query: 441 RRPLTINSNSIYNRLIDGLCKQGQVFESCIILDDMVKDSLTPDPYVWNTLVSCVCR 274 R L N + Y LIDGL KQG V E + D+MV + + + +N L+S VC+ Sbjct: 318 RAGLNPN-HFAYTALIDGLMKQGNVVEGFRVKDEMVARGIKLNVFTYNALISGVCK 372 Score = 78.2 bits (191), Expect = 2e-12 Identities = 39/116 (33%), Positives = 66/116 (56%) Frame = -3 Query: 621 FDILIEGFCNEGKVHKGLELLDSAIERREPAKAKSYEALVDAFCNEGRFREAASVMERML 442 + ++I+G+C G + + +LLD R P + +Y ALVD C EG+ +A S+ M+ Sbjct: 713 YTMIIDGYCKSGNLTQAFQLLDEMPSRGVPPDSFAYCALVDGCCKEGKLEKALSLFYEMV 772 Query: 441 RRPLTINSNSIYNRLIDGLCKQGQVFESCIILDDMVKDSLTPDPYVWNTLVSCVCR 274 R+ S + +N LIDGLCK G+ ++ +L+DMV +TP+ + L+ C+ Sbjct: 773 RKGFA--STTAFNALIDGLCKSGKPNDANGLLEDMVDKCITPNHITYTILIDHHCK 826 Score = 62.8 bits (151), Expect = 8e-08 Identities = 32/114 (28%), Positives = 53/114 (46%) Frame = -3 Query: 612 LIEGFCNEGKVHKGLELLDSAIERREPAKAKSYEALVDAFCNEGRFREAASVMERMLRRP 433 LI GFC G + L L ++ +Y L+ C G +A V + ++ Sbjct: 646 LISGFCKLGDMKAALNLYKEMCQKSIAPNIVTYNTLIGGLCKAGNIEKARKVFNEISQKA 705 Query: 432 LTINSNSIYNRLIDGLCKQGQVFESCIILDDMVKDSLTPDPYVWNTLVSCVCRK 271 L N+ S Y +IDG CK G + ++ +LD+M + PD + + LV C++ Sbjct: 706 LAPNTKS-YTMIIDGYCKSGNLTQAFQLLDEMPSRGVPPDSFAYCALVDGCCKE 758 Score = 55.8 bits (133), Expect = 9e-06 Identities = 38/130 (29%), Positives = 64/130 (49%), Gaps = 3/130 (2%) Frame = -3 Query: 621 FDILIEGFCNEGKVHKGLELLDSAIERREPAKAKSYEALVDAFCNEGRFREAASVMERML 442 F ILIE + K+ K ELL+ +Y +++ C+ G A V++ M+ Sbjct: 398 FSILIESYSRAKKIDKAYELLNEMKRSNLTPTLYTYSGIINGLCHCGDLERANHVLDAMV 457 Query: 441 RRPLTINSNSIYNRLIDGLCKQGQVFESCIILDDMVKDSLTPDPYVWNTLVSCVCRKRLL 262 L N IY LI G ++ + E+ ILD M++ + PD NTL+S +C+ + + Sbjct: 458 EGGLKPNL-VIYTNLIKGHIQKSRFEEARRILDRMMEKGVLPDVICCNTLISGLCKAQKM 516 Query: 261 ---RNRVVEL 241 R+ +VE+ Sbjct: 517 DEARSCLVEM 526 >ref|XP_004305215.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700, chloroplastic-like [Fragaria vesca subsp. vesca] Length = 761 Score = 79.3 bits (194), Expect = 8e-13 Identities = 38/116 (32%), Positives = 66/116 (56%) Frame = -3 Query: 621 FDILIEGFCNEGKVHKGLELLDSAIERREPAKAKSYEALVDAFCNEGRFREAASVMERML 442 + +LI+ +C+ GK+ + L LL A Y L+D FC R +A + ++M Sbjct: 445 YSLLIDSYCSRGKLEEALSLLKDMESSGCARNAVIYNTLIDGFCKNKRIEDAEEIFDQME 504 Query: 441 RRPLTINSNSIYNRLIDGLCKQGQVFESCIILDDMVKDSLTPDPYVWNTLVSCVCR 274 + ++ NS + YN LIDGLC+ +V E+ ++D M+ + L PD + +N+L++ CR Sbjct: 505 LQGISRNSVT-YNTLIDGLCQNRRVEEASQLMDQMIMEGLKPDKFTYNSLLTYFCR 559 Score = 79.0 bits (193), Expect = 1e-12 Identities = 40/129 (31%), Positives = 70/129 (54%) Frame = -3 Query: 618 DILIEGFCNEGKVHKGLELLDSAIERREPAKAKSYEALVDAFCNEGRFREAASVMERMLR 439 ++L+ GFC EG+V + ++ + ++ LV C G + A +M+ ML+ Sbjct: 271 NVLVNGFCKEGRVDEAFGFIEKMAKEGFSPDQYTFNTLVKGLCRVGHVKHALEIMDVMLQ 330 Query: 438 RPLTINSNSIYNRLIDGLCKQGQVFESCIILDDMVKDSLTPDPYVWNTLVSCVCRKRLLR 259 ++ + YN L+ GLCK G++ E+ ILD MV +P+ +NTL+S +C++ Sbjct: 331 EGFDLDIYT-YNALVSGLCKLGEIEEAVDILDQMVSRDCSPNTVTYNTLISTLCKE---- 385 Query: 258 NRVVELSKI 232 NRV E +K+ Sbjct: 386 NRVEEATKL 394 Score = 66.2 bits (160), Expect = 7e-09 Identities = 37/132 (28%), Positives = 69/132 (52%) Frame = -3 Query: 621 FDILIEGFCNEGKVHKGLELLDSAIERREPAKAKSYEALVDAFCNEGRFREAASVMERML 442 F +++G+ EG++ L + + +E + LV+ FC EGR EA +E+M Sbjct: 235 FTTIMQGYIEEGEMKGALRIREQMVEYGCHCSNVTVNVLVNGFCKEGRVDEAFGFIEKMA 294 Query: 441 RRPLTINSNSIYNRLIDGLCKQGQVFESCIILDDMVKDSLTPDPYVWNTLVSCVCRKRLL 262 + + + + +N L+ GLC+ G V + I+D M+++ D Y +N LVS +C+ + Sbjct: 295 KEGFSPDQYT-FNTLVKGLCRVGHVKHALEIMDVMLQEGFDLDIYTYNALVSGLCKLGEI 353 Query: 261 RNRVVELSKIVA 226 V L ++V+ Sbjct: 354 EEAVDILDQMVS 365 Score = 65.5 bits (158), Expect = 1e-08 Identities = 34/115 (29%), Positives = 59/115 (51%) Frame = -3 Query: 621 FDILIEGFCNEGKVHKGLELLDSAIERREPAKAKSYEALVDAFCNEGRFREAASVMERML 442 F+ L++G C G V LE++D ++ +Y ALV C G EA ++++M+ Sbjct: 305 FNTLVKGLCRVGHVKHALEIMDVMLQEGFDLDIYTYNALVSGLCKLGEIEEAVDILDQMV 364 Query: 441 RRPLTINSNSIYNRLIDGLCKQGQVFESCIILDDMVKDSLTPDPYVWNTLVSCVC 277 R + N+ + YN LI LCK+ +V E+ + + + PD N+L+ +C Sbjct: 365 SRDCSPNTVT-YNTLISTLCKENRVEEATKLARVLTSKGIIPDVCTVNSLIQGLC 418 Score = 64.7 bits (156), Expect = 2e-08 Identities = 34/116 (29%), Positives = 60/116 (51%) Frame = -3 Query: 621 FDILIEGFCNEGKVHKGLELLDSAIERREPAKAKSYEALVDAFCNEGRFREAASVMERML 442 F+ILI+ C ++ L L++ K++ ++ + EG + A + E+M+ Sbjct: 200 FNILIKALCRAHQIRPALLLMEEMGSYGLKPDEKTFTTIMQGYIEEGEMKGALRIREQMV 259 Query: 441 RRPLTINSNSIYNRLIDGLCKQGQVFESCIILDDMVKDSLTPDPYVWNTLVSCVCR 274 SN N L++G CK+G+V E+ ++ M K+ +PD Y +NTLV +CR Sbjct: 260 EYGCHC-SNVTVNVLVNGFCKEGRVDEAFGFIEKMAKEGFSPDQYTFNTLVKGLCR 314 Score = 62.0 bits (149), Expect = 1e-07 Identities = 37/128 (28%), Positives = 65/128 (50%) Frame = -3 Query: 612 LIEGFCNEGKVHKGLELLDSAIERREPAKAKSYEALVDAFCNEGRFREAASVMERMLRRP 433 LI+G C +EL + + +Y L+D++C+ G+ EA S+++ M Sbjct: 413 LIQGLCLNSNHKVAMELFEEMKMKGCQPDGFTYSLLIDSYCSRGKLEEALSLLKDMESSG 472 Query: 432 LTINSNSIYNRLIDGLCKQGQVFESCIILDDMVKDSLTPDPYVWNTLVSCVCRKRLLRNR 253 N+ IYN LIDG CK ++ ++ I D M ++ + +NTL+ +C+ R R Sbjct: 473 CARNA-VIYNTLIDGFCKNKRIEDAEEIFDQMELQGISRNSVTYNTLIDGLCQNR----R 527 Query: 252 VVELSKIV 229 V E S+++ Sbjct: 528 VEEASQLM 535 Score = 57.4 bits (137), Expect = 3e-06 Identities = 33/131 (25%), Positives = 62/131 (47%) Frame = -3 Query: 621 FDILIEGFCNEGKVHKGLELLDSAIERREPAKAKSYEALVDAFCNEGRFREAASVMERML 442 ++ LI+G C +V + +L+D I +Y +L+ FC G ++AA +++ M Sbjct: 515 YNTLIDGLCQNRRVEEASQLMDQMIMEGLKPDKFTYNSLLTYFCRSGDIKKAADIVQNMT 574 Query: 441 RRPLTINSNSIYNRLIDGLCKQGQVFESCIILDDMVKDSLTPDPYVWNTLVSCVCRKRLL 262 + + Y LI GLCK G+ + +L + L P P+ +N ++ + + Sbjct: 575 SNGCEPDIVT-YGTLIQGLCKAGRTEVASRLLRSLPMKGLVPTPHAYNPVIQALFK---- 629 Query: 261 RNRVVELSKIV 229 R R E ++V Sbjct: 630 RKRTTEAMRLV 640 >ref|XP_006658440.1| PREDICTED: pentatricopeptide repeat-containing protein At3g06920-like [Oryza brachyantha] Length = 881 Score = 79.0 bits (193), Expect = 1e-12 Identities = 39/125 (31%), Positives = 69/125 (55%) Frame = -3 Query: 621 FDILIEGFCNEGKVHKGLELLDSAIERREPAKAKSYEALVDAFCNEGRFREAASVMERML 442 ++ +++GFC GKV K E+L+ E+ +Y A+VD R EA + E Sbjct: 600 YNAVVDGFCKSGKVDKAYEVLEEMKEKHVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAK 659 Query: 441 RRPLTINSNSIYNRLIDGLCKQGQVFESCIILDDMVKDSLTPDPYVWNTLVSCVCRKRLL 262 + + +N +Y+ LIDG K G++ E+ +IL++M+K LTP+ Y WN+L+ + + + Sbjct: 660 SKGIEVNV-VLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKAEEI 718 Query: 261 RNRVV 247 +V Sbjct: 719 NEALV 723 >ref|XP_004978355.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52620-like [Setaria italica] Length = 857 Score = 78.2 bits (191), Expect = 2e-12 Identities = 44/120 (36%), Positives = 66/120 (55%) Frame = -3 Query: 621 FDILIEGFCNEGKVHKGLELLDSAIERREPAKAKSYEALVDAFCNEGRFREAASVMERML 442 F+ LI FC EG V + L+LL AI R SY L+ AFC G A+ ++ M+ Sbjct: 394 FNTLISAFCREGDVQQALQLLREAIRRELEPNQVSYTPLIHAFCIRGEVMVASDLLVEMM 453 Query: 441 RRPLTINSNSIYNRLIDGLCKQGQVFESCIILDDMVKDSLTPDPYVWNTLVSCVCRKRLL 262 R T + + + LI GL GQV E+ I+ + M + + PD ++N L+S +C+KR+L Sbjct: 454 GRGHTPDVVT-FGSLIHGLVVAGQVSEALIVREKMAERRVMPDANIYNVLISGLCKKRML 512 Score = 60.1 bits (144), Expect = 5e-07 Identities = 34/117 (29%), Positives = 58/117 (49%) Frame = -3 Query: 621 FDILIEGFCNEGKVHKGLELLDSAIERREPAKAKSYEALVDAFCNEGRFREAASVMERML 442 +++LI+G+C G + K L LL + A +Y ++V+ +G + S++ M Sbjct: 289 YNVLIDGYCQRGDIGKALLLLGDMDTKGFLPTAVTYGSIVNWLGRKGDLEKIGSLLGEMR 348 Query: 441 RRPLTINSNSIYNRLIDGLCKQGQVFESCIILDDMVKDSLTPDPYVWNTLVSCVCRK 271 R L N IYN ++D LCK ++ +L + PD +NTL+S CR+ Sbjct: 349 VRGLPPNVQ-IYNTVVDALCKCQSATQAMAVLKQLFASGCDPDIVTFNTLISAFCRE 404 >ref|XP_004249774.1| PREDICTED: pentatricopeptide repeat-containing protein At5g65560-like [Solanum lycopersicum] Length = 913 Score = 78.2 bits (191), Expect = 2e-12 Identities = 46/153 (30%), Positives = 82/153 (53%), Gaps = 5/153 (3%) Frame = -3 Query: 621 FDILIEGFCNEGKVHKGLELLDSAIERREPAKAKSYEALVDAFCNEGRFREAASVMERML 442 ++ LI+G+C +G VH L +LD+ + ++Y L+ FC + +A S++++ML Sbjct: 391 YNALIDGYCKKGLVHVALSILDTMESKSCLPNVRTYNELISGFCRAKKVHKAMSLLDKML 450 Query: 441 RRPLTINSNSIYNRLIDGLCKQGQVFESCIILDDMVKDSLTPDPYVWNTLVSCVCRKRLL 262 R L+ SN +N L+ G CK G++ + +L M ++ L PD + + TLV +C Sbjct: 451 ERKLS-PSNVTFNLLVHGQCKDGEIDSAFRLLRLMEENGLAPDEWSYGTLVDGLCE---- 505 Query: 261 RNRVVELSKIVA*AFE-----DLILHWESIEGH 178 R RV E + I + E ++ ++ I+GH Sbjct: 506 RGRVEEANTIFSSLKEKGIKVNVAMYTALIDGH 538 Score = 70.1 bits (170), Expect = 5e-10 Identities = 36/116 (31%), Positives = 63/116 (54%) Frame = -3 Query: 621 FDILIEGFCNEGKVHKGLELLDSAIERREPAKAKSYEALVDAFCNEGRFREAASVMERML 442 + +LI+G C + K+ + ELL+ E+ A +Y AL+D +C +G A S+++ M Sbjct: 356 YTVLIDGLCKDSKLDEARELLNVMSEKGLVPSAVTYNALIDGYCKKGLVHVALSILDTME 415 Query: 441 RRPLTINSNSIYNRLIDGLCKQGQVFESCIILDDMVKDSLTPDPYVWNTLVSCVCR 274 + N + YN LI G C+ +V ++ +LD M++ L+P +N LV C+ Sbjct: 416 SKSCLPNVRT-YNELISGFCRAKKVHKAMSLLDKMLERKLSPSNVTFNLLVHGQCK 470 Score = 65.1 bits (157), Expect = 2e-08 Identities = 41/157 (26%), Positives = 71/157 (45%) Frame = -3 Query: 621 FDILIEGFCNEGKVHKGLELLDSAIERREPAKAKSYEALVDAFCNEGRFREAASVMERML 442 + L++G C G+V + + S E+ Y AL+D CN +F A ++ ++M+ Sbjct: 496 YGTLVDGLCERGRVEEANTIFSSLKEKGIKVNVAMYTALIDGHCNAEKFDFAFTLFKKMI 555 Query: 441 RRPLTINSNSIYNRLIDGLCKQGQVFESCIILDDMVKDSLTPDPYVWNTLVSCVCRKRLL 262 + + N+ YN LI+GLCKQG+ E+ +L+ M + + P ++ L+ Sbjct: 556 KEGCSPNA-CTYNVLINGLCKQGKQLEAAQLLESMAESGVEPTIESYSILIE-------- 606 Query: 261 RNRVVELSKIVA*AFEDLILHWESIEGHFSTLCFITS 151 +L K A D + GH +C TS Sbjct: 607 -----QLLKECAFDHADKVFSLMMSRGHKPDVCIYTS 638 Score = 60.1 bits (144), Expect = 5e-07 Identities = 34/120 (28%), Positives = 61/120 (50%) Frame = -3 Query: 621 FDILIEGFCNEGKVHKGLELLDSAIERREPAKAKSYEALVDAFCNEGRFREAASVMERML 442 ++ LI G C ++++ ++L + ++Y L+DA C R EA S+ + M Sbjct: 286 YNNLIHGLCETRRINEAMKLFLEMADDGCSPNVRTYTILIDALCRLDRRVEALSLFDEMR 345 Query: 441 RRPLTINSNSIYNRLIDGLCKQGQVFESCIILDDMVKDSLTPDPYVWNTLVSCVCRKRLL 262 + N ++ Y LIDGLCK ++ E+ +L+ M + L P +N L+ C+K L+ Sbjct: 346 EKGCEPNVHT-YTVLIDGLCKDSKLDEARELLNVMSEKGLVPSAVTYNALIDGYCKKGLV 404 >ref|XP_002461759.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor] gi|241925136|gb|EER98280.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor] Length = 896 Score = 78.2 bits (191), Expect = 2e-12 Identities = 36/125 (28%), Positives = 70/125 (56%) Frame = -3 Query: 621 FDILIEGFCNEGKVHKGLELLDSAIERREPAKAKSYEALVDAFCNEGRFREAASVMERML 442 ++ +++GFC GK+ K E+L+ +R P +Y +++D R EA + E Sbjct: 604 YNAVVDGFCKSGKLDKAYEVLEEMKVKRVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAK 663 Query: 441 RRPLTINSNSIYNRLIDGLCKQGQVFESCIILDDMVKDSLTPDPYVWNTLVSCVCRKRLL 262 + + +N +Y+ LIDG K G++ E+ +IL++M+K LTP+ Y WN+L+ + + + Sbjct: 664 SKGIELNV-IVYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKAEEI 722 Query: 261 RNRVV 247 ++ Sbjct: 723 NEALI 727 >ref|XP_006382761.1| hypothetical protein POPTR_0005s05170g [Populus trichocarpa] gi|550338129|gb|ERP60558.1| hypothetical protein POPTR_0005s05170g [Populus trichocarpa] Length = 530 Score = 77.8 bits (190), Expect = 2e-12 Identities = 39/132 (29%), Positives = 73/132 (55%) Frame = -3 Query: 621 FDILIEGFCNEGKVHKGLELLDSAIERREPAKAKSYEALVDAFCNEGRFREAASVMERML 442 + +I+ C + V+ +E L +ER P +Y ++V FCN G+ EA + + M+ Sbjct: 153 YSTIIDSLCKDRLVNDAMEFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMV 212 Query: 441 RRPLTINSNSIYNRLIDGLCKQGQVFESCIILDDMVKDSLTPDPYVWNTLVSCVCRKRLL 262 R + N+ + + L+DGLCK+G V E+ + + M++ + P+ Y +N L+ C +R + Sbjct: 213 GRDVMPNTVT-FTILVDGLCKEGMVSEARCVFETMIEKGVEPNIYTYNALMDGYCLQRQM 271 Query: 261 RNRVVELSKIVA 226 N E+ +I+A Sbjct: 272 -NEAKEVFEIMA 282 Score = 70.1 bits (170), Expect = 5e-10 Identities = 38/116 (32%), Positives = 64/116 (55%) Frame = -3 Query: 621 FDILIEGFCNEGKVHKGLELLDSAIERREPAKAKSYEALVDAFCNEGRFREAASVMERML 442 F IL++G C EG V + + ++ IE+ +Y AL+D +C + + EA V E M Sbjct: 223 FTILVDGLCKEGMVSEARCVFETMIEKGVEPNIYTYNALMDGYCLQRQMNEAKEVFEIMA 282 Query: 441 RRPLTINSNSIYNRLIDGLCKQGQVFESCIILDDMVKDSLTPDPYVWNTLVSCVCR 274 R+ + S YN LI+G CK ++ E+ +L +M +L PD ++TL+ +C+ Sbjct: 283 RQGCAPDVRS-YNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQ 337 Score = 68.2 bits (165), Expect = 2e-09 Identities = 35/118 (29%), Positives = 60/118 (50%) Frame = -3 Query: 621 FDILIEGFCNEGKVHKGLELLDSAIERREPAKAKSYEALVDAFCNEGRFREAASVMERML 442 ++ ++ GFCN G++++ L + R ++ LVD C EG EA V E M+ Sbjct: 188 YNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGLCKEGMVSEARCVFETMI 247 Query: 441 RRPLTINSNSIYNRLIDGLCKQGQVFESCIILDDMVKDSLTPDPYVWNTLVSCVCRKR 268 + + N + YN L+DG C Q Q+ E+ + + M + PD +N L++ C+ R Sbjct: 248 EKGVEPNIYT-YNALMDGYCLQRQMNEAKEVFEIMARQGCAPDVRSYNILINGFCKSR 304 Score = 67.4 bits (163), Expect = 3e-09 Identities = 34/115 (29%), Positives = 60/115 (52%) Frame = -3 Query: 621 FDILIEGFCNEGKVHKGLELLDSAIERREPAKAKSYEALVDAFCNEGRFREAASVMERML 442 F+ LI G CNEGK+ + +EL + ++R SY +++ C G A V ++M Sbjct: 83 FNALINGLCNEGKIKEAVELFNEMVKRGHEPNVISYTTVINGLCKTGNTSMAVDVFKKME 142 Query: 441 RRPLTINSNSIYNRLIDGLCKQGQVFESCIILDDMVKDSLTPDPYVWNTLVSCVC 277 + N + Y+ +ID LCK V ++ L +MV+ + P+ + +N++V C Sbjct: 143 QNGCKPNVVT-YSTIIDSLCKDRLVNDAMEFLSEMVERGIPPNVFTYNSIVHGFC 196 Score = 63.5 bits (153), Expect = 5e-08 Identities = 39/151 (25%), Positives = 72/151 (47%) Frame = -3 Query: 618 DILIEGFCNEGKVHKGLELLDSAIERREPAKAKSYEALVDAFCNEGRFREAASVMERMLR 439 +ILI C V + +L + A ++ AL++ CNEG+ +EA + M++ Sbjct: 49 NILINCLCRLNHVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVK 108 Query: 438 RPLTINSNSIYNRLIDGLCKQGQVFESCIILDDMVKDSLTPDPYVWNTLVSCVCRKRLLR 259 R N S Y +I+GLCK G + + M ++ P+ ++T++ +C+ RL+ Sbjct: 109 RGHEPNVIS-YTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVN 167 Query: 258 NRVVELSKIVA*AFEDLILHWESIEGHFSTL 166 + + LS++V + + SI F L Sbjct: 168 DAMEFLSEMVERGIPPNVFTYNSIVHGFCNL 198 >ref|XP_006857565.1| hypothetical protein AMTR_s00061p00066220 [Amborella trichopoda] gi|548861661|gb|ERN19032.1| hypothetical protein AMTR_s00061p00066220 [Amborella trichopoda] Length = 732 Score = 77.8 bits (190), Expect = 2e-12 Identities = 43/120 (35%), Positives = 70/120 (58%) Frame = -3 Query: 621 FDILIEGFCNEGKVHKGLELLDSAIERREPAKAKSYEALVDAFCNEGRFREAASVMERML 442 + +LI G C +GKV + EL I+R +Y AL+D +C E + ++A S+ +M+ Sbjct: 377 YTVLICGLCRKGKVREAEELFKEMIDRGLNPDEITYTALIDGYCKEHKMKDAFSLHNQMV 436 Query: 441 RRPLTINSNSIYNRLIDGLCKQGQVFESCIILDDMVKDSLTPDPYVWNTLVSCVCRKRLL 262 R+ LT N + Y L DGLCK G+V + +L +MV L + Y +NTL++ +C+ +L Sbjct: 437 RQGLTPNIVT-YTALSDGLCKGGEVDAANELLHEMVGKGLVLNIYTYNTLINGLCKVGIL 495 Score = 64.7 bits (156), Expect = 2e-08 Identities = 34/121 (28%), Positives = 61/121 (50%) Frame = -3 Query: 621 FDILIEGFCNEGKVHKGLELLDSAIERREPAKAKSYEALVDAFCNEGRFREAASVMERML 442 + LI+G+C G++ K L+L+ + + +Y +++ CN + EA +M M+ Sbjct: 272 YSTLIDGYCRIGELQKALDLIREMEAKGLNPNSFTYSSVIVVLCNRSKVTEAEKLMREMV 331 Query: 441 RRPLTINSNSIYNRLIDGLCKQGQVFESCIILDDMVKDSLTPDPYVWNTLVSCVCRKRLL 262 + + N +Y LIDG CK G + ++ + DDM L D + L+ +CRK + Sbjct: 332 DSGV-VPDNVVYTTLIDGFCKIGSLKDAYRLADDMKIKGLVLDNVAYTVLICGLCRKGKV 390 Query: 261 R 259 R Sbjct: 391 R 391 Score = 56.6 bits (135), Expect = 6e-06 Identities = 31/122 (25%), Positives = 60/122 (49%) Frame = -3 Query: 621 FDILIEGFCNEGKVHKGLELLDSAIERREPAKAKSYEALVDAFCNEGRFREAASVMERML 442 + +I CN KV + +L+ ++ Y L+D FC G ++A + + M Sbjct: 307 YSSVIVVLCNRSKVTEAEKLMREMVDSGVVPDNVVYTTLIDGFCKIGSLKDAYRLADDMK 366 Query: 441 RRPLTINSNSIYNRLIDGLCKQGQVFESCIILDDMVKDSLTPDPYVWNTLVSCVCRKRLL 262 + L ++ N Y LI GLC++G+V E+ + +M+ L PD + L+ C++ + Sbjct: 367 IKGLVLD-NVAYTVLICGLCRKGKVREAEELFKEMIDRGLNPDEITYTALIDGYCKEHKM 425 Query: 261 RN 256 ++ Sbjct: 426 KD 427 >ref|XP_002869525.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata subsp. lyrata] gi|297315361|gb|EFH45784.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata subsp. lyrata] Length = 707 Score = 77.4 bits (189), Expect = 3e-12 Identities = 43/128 (33%), Positives = 73/128 (57%), Gaps = 2/128 (1%) Frame = -3 Query: 612 LIEGFCNEGKVHKGLELLDSAIERREPAKAKSYEALVDAFCNEGRFREAASVMERMLRRP 433 LI GFC+ G++ +G L D +ER + A +Y L+ FC GR +EA+ + E M+ R Sbjct: 253 LIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGRLKEASEIFEFMMERG 312 Query: 432 LTINSNSIYNRLIDGLCKQGQVFESCIILDDMVKDSLTPDPYVWNTLVSCVCRKRLLRN- 256 + N + Y LIDGLC G+ E+ +L+ M++ P+ +N +++ +C+ L+ + Sbjct: 313 VRPNVYT-YTGLIDGLCGVGKTKEALQLLNLMLQKDEEPNVVTYNIIINKLCKDSLVADA 371 Query: 255 -RVVELSK 235 +VEL K Sbjct: 372 LEIVELMK 379 Score = 66.6 bits (161), Expect = 5e-09 Identities = 37/115 (32%), Positives = 63/115 (54%), Gaps = 2/115 (1%) Frame = -3 Query: 612 LIEGFCNEGKVHKGLELLDSAIERREPAKAKSYEALVDAFCNEGRFREAASVMERMLRRP 433 LI+G C GK + L+LL+ +++ E +Y +++ C + +A ++E M +R Sbjct: 323 LIDGLCGVGKTKEALQLLNLMLQKDEEPNVVTYNIIINKLCKDSLVADALEIVELMKKRR 382 Query: 432 LTINSNSIYNRLIDGLCKQGQVFESCIILDDMVKDSLTPDPYV--WNTLVSCVCR 274 T N YN L+ GLC +G + E+ +L M+KDS DP V +N L+ +C+ Sbjct: 383 -TRPDNITYNSLLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISFNALIHGLCK 436 Score = 64.3 bits (155), Expect = 3e-08 Identities = 35/117 (29%), Positives = 62/117 (52%) Frame = -3 Query: 621 FDILIEGFCNEGKVHKGLELLDSAIERREPAKAKSYEALVDAFCNEGRFREAASVMERML 442 ++ LI GFC G++ + E+ + +ER +Y L+D C G+ +EA ++ ML Sbjct: 285 YNTLIRGFCKLGRLKEASEIFEFMMERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLML 344 Query: 441 RRPLTINSNSIYNRLIDGLCKQGQVFESCIILDDMVKDSLTPDPYVWNTLVSCVCRK 271 ++ N + YN +I+ LCK V ++ I++ M K PD +N+L+ +C K Sbjct: 345 QKDEEPNVVT-YNIIINKLCKDSLVADALEIVELMKKRRTRPDNITYNSLLGGLCAK 400 Score = 55.8 bits (133), Expect = 9e-06 Identities = 31/120 (25%), Positives = 60/120 (50%) Frame = -3 Query: 621 FDILIEGFCNEGKVHKGLELLDSAIERREPAKAKSYEALVDAFCNEGRFREAASVMERML 442 F+ LI G C ++H+ L++ D +E+ + L+++ G +A + +++ Sbjct: 427 FNALIHGLCKGNRLHQALDIYDLLVEKLGAGDIVTTNILLNSTLKSGDVNKAMELWKQIS 486 Query: 441 RRPLTINSNSIYNRLIDGLCKQGQVFESCIILDDMVKDSLTPDPYVWNTLVSCVCRKRLL 262 + NS++ Y +IDG CK G + + +L M L P + +N L+S +C+K L Sbjct: 487 NSKIVPNSDT-YTTMIDGFCKTGMLNVAKGLLCKMRLSELPPSVFDYNCLLSSLCKKGTL 545 >ref|XP_003518493.2| PREDICTED: pentatricopeptide repeat-containing protein At5g64320, mitochondrial-like [Glycine max] Length = 739 Score = 77.0 bits (188), Expect = 4e-12 Identities = 38/116 (32%), Positives = 66/116 (56%) Frame = -3 Query: 621 FDILIEGFCNEGKVHKGLELLDSAIERREPAKAKSYEALVDAFCNEGRFREAASVMERML 442 F+I+I+G +G + LELL+ + +R +Y L++ FC +GR EAA ++ M Sbjct: 394 FNIMIDGLVKKGYLVSALELLNEMVAKRFEPNVITYTILINGFCKQGRLEEAAEIVNSMS 453 Query: 441 RRPLTINSNSIYNRLIDGLCKQGQVFESCIILDDMVKDSLTPDPYVWNTLVSCVCR 274 + L++N+ YN LI LCK G + E+ + +M PD Y +N+L++ +C+ Sbjct: 454 AKGLSLNTVG-YNCLICALCKDGNIEEALQLFGEMSGKGCKPDIYTFNSLINGLCK 508 Score = 67.4 bits (163), Expect = 3e-09 Identities = 38/126 (30%), Positives = 63/126 (50%) Frame = -3 Query: 612 LIEGFCNEGKVHKGLELLDSAIERREPAKAKSYEALVDAFCNEGRFREAASVMERMLRRP 433 LI+ C G V KGL L + + + S L+ C G+ +A ++ M+ R Sbjct: 572 LIKALCKTGAVEKGLGLFEEMLGKGIFPTIISCNILISGLCRTGKVNDALKFLQDMIHRG 631 Query: 432 LTINSNSIYNRLIDGLCKQGQVFESCIILDDMVKDSLTPDPYVWNTLVSCVCRKRLLRNR 253 LT + + YN LI+GLCK G V E+ + + + + + PD +NTL+S C + + + Sbjct: 632 LTPDIVT-YNSLINGLCKMGHVQEASNLFNKLQSEGIRPDAITYNTLISRHCHEGMFNDA 690 Query: 252 VVELSK 235 + L K Sbjct: 691 CLLLYK 696 Score = 62.0 bits (149), Expect = 1e-07 Identities = 31/116 (26%), Positives = 59/116 (50%) Frame = -3 Query: 618 DILIEGFCNEGKVHKGLELLDSAIERREPAKAKSYEALVDAFCNEGRFREAASVMERMLR 439 +ILI G C GKV+ L+ L I R +Y +L++ C G +EA+++ ++ Sbjct: 605 NILISGLCRTGKVNDALKFLQDMIHRGLTPDIVTYNSLINGLCKMGHVQEASNLFNKLQS 664 Query: 438 RPLTINSNSIYNRLIDGLCKQGQVFESCIILDDMVKDSLTPDPYVWNTLVSCVCRK 271 + ++ + YN LI C +G ++C++L V P+ W+ L++ + +K Sbjct: 665 EGIRPDAIT-YNTLISRHCHEGMFNDACLLLYKGVDSGFIPNEVTWSILINYIVKK 719 Score = 61.6 bits (148), Expect = 2e-07 Identities = 39/141 (27%), Positives = 74/141 (52%), Gaps = 1/141 (0%) Frame = -3 Query: 621 FDILIEGFCNEGKVHKGLELLDSAIERREPAKAKSYEALVDAFCNEGRFREAASVMERML 442 F+ +I G C G++H+ +LLD + R A +Y L+ C G+ EA +++ + + Sbjct: 292 FNDVIHGLCRAGRIHEAAKLLDRMLLRGFSTDALTYGYLMHGLCRMGQVDEARALLNK-I 350 Query: 441 RRPLTINSNSIYNRLIDGLCKQGQVFES-CIILDDMVKDSLTPDPYVWNTLVSCVCRKRL 265 P T+ +YN LI G G+ E+ ++ ++MV PD Y +N ++ + +K Sbjct: 351 PNPNTV----LYNTLISGYVASGRFEEAKDLLYNNMVIAGYEPDAYTFNIMIDGLVKKGY 406 Query: 264 LRNRVVELSKIVA*AFEDLIL 202 L + + L+++VA FE ++ Sbjct: 407 LVSALELLNEMVAKRFEPNVI 427 Score = 57.4 bits (137), Expect = 3e-06 Identities = 32/112 (28%), Positives = 59/112 (52%) Frame = -3 Query: 621 FDILIEGFCNEGKVHKGLELLDSAIERREPAKAKSYEALVDAFCNEGRFREAASVMERML 442 + LI C +V + L+LL+ +++ ++ C GR EAA +++RML Sbjct: 257 YQTLIHALCENNRVSEALQLLEDMFLMCCEPDVQTFNDVIHGLCRAGRIHEAAKLLDRML 316 Query: 441 RRPLTINSNSIYNRLIDGLCKQGQVFESCIILDDMVKDSLTPDPYVWNTLVS 286 R + ++ + Y L+ GLC+ GQV E+ +L+ + P+ ++NTL+S Sbjct: 317 LRGFSTDALT-YGYLMHGLCRMGQVDEARALLNKIP----NPNTVLYNTLIS 363