BLASTX nr result

ID: Ephedra28_contig00029932 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00029932
         (426 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK24329.1| unknown [Picea sitchensis]                              69   8e-10

>gb|ABK24329.1| unknown [Picea sitchensis]
          Length = 417

 Score = 68.6 bits (166), Expect = 8e-10
 Identities = 38/81 (46%), Positives = 48/81 (59%)
 Frame = -3

Query: 244 MMKQGNLNHRRDEE*QTPGDGGGDRDLYSPKSQKSKSLIRSMRYXXXXXXXXXXIMGMLI 65
           M KQ +LNHRRDEE QTP D     D YSPK+ K KSL + + Y          ++GMLI
Sbjct: 1   MHKQSSLNHRRDEEVQTPADA----DPYSPKAVKPKSLPKPVHYLLKEQRWLFVLVGMLI 56

Query: 64  ATIIFVPQPTLVKNDISKKLG 2
           A+ +F+  P L K DI K +G
Sbjct: 57  ASTLFILGPNLAKRDIRKTIG 77


Top