BLASTX nr result
ID: Ephedra28_contig00029896
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra28_contig00029896
(388 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006658718.1| PREDICTED: pentatricopeptide repeat-containi... 139 3e-31
dbj|BAC83258.1| pentatricopeptide (PPR) repeat-containing protei... 139 4e-31
gb|EEE67500.1| hypothetical protein OsJ_24934 [Oryza sativa Japo... 139 4e-31
ref|XP_003560023.1| PREDICTED: pentatricopeptide repeat-containi... 136 3e-30
gb|EMT12987.1| hypothetical protein F775_06874 [Aegilops tauschii] 135 4e-30
tpg|DAA63384.1| TPA: hypothetical protein ZEAMMB73_689576 [Zea m... 134 1e-29
ref|XP_004959800.1| PREDICTED: pentatricopeptide repeat-containi... 133 2e-29
ref|XP_002463110.1| hypothetical protein SORBIDRAFT_02g037960 [S... 133 3e-29
ref|XP_006473595.1| PREDICTED: pentatricopeptide repeat-containi... 132 5e-29
ref|XP_006435103.1| hypothetical protein CICLE_v10000322mg [Citr... 129 3e-28
ref|XP_002521664.1| pentatricopeptide repeat-containing protein,... 129 5e-28
gb|EOY05619.1| Pentatricopeptide repeat (PPR) superfamily protei... 128 7e-28
ref|XP_002302000.2| pentatricopeptide repeat-containing family p... 127 1e-27
ref|XP_004167110.1| PREDICTED: pentatricopeptide repeat-containi... 127 2e-27
ref|XP_004152765.1| PREDICTED: pentatricopeptide repeat-containi... 127 2e-27
ref|XP_002893429.1| pentatricopeptide repeat-containing protein ... 126 3e-27
gb|EMJ17324.1| hypothetical protein PRUPE_ppa018932mg [Prunus pe... 125 4e-27
ref|XP_006306802.1| hypothetical protein CARUB_v10008344mg [Caps... 125 8e-27
ref|XP_002280360.1| PREDICTED: pentatricopeptide repeat-containi... 125 8e-27
ref|XP_006841418.1| hypothetical protein AMTR_s00003p00032470 [A... 124 2e-26
>ref|XP_006658718.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Oryza brachyantha]
Length = 749
Score = 139 bits (351), Expect = 3e-31
Identities = 66/102 (64%), Positives = 81/102 (79%)
Frame = -2
Query: 306 GRELHAHMIQSGCEFSVSASNALITMYGRCGMVDDAYQVFETMRNCDLISYNAMIAAFGQ 127
GR+LHAH+++ G E S SA NAL+TMY +CG V DA VF M N D +S+NAMI+A GQ
Sbjct: 396 GRQLHAHLVRCGFEASNSAGNALLTMYAKCGAVKDARVVFLVMPNVDSVSWNAMISALGQ 455
Query: 126 HGYGKKALELFDKMVVSGISPDRISFLSALSGCSHAGLLDEG 1
HGYG++ALELFDKMV GI PDRISFL+ L+ C+HAGL+DEG
Sbjct: 456 HGYGREALELFDKMVTEGIYPDRISFLTILTACNHAGLVDEG 497
>dbj|BAC83258.1| pentatricopeptide (PPR) repeat-containing protein-like protein
[Oryza sativa Japonica Group]
gi|50509373|dbj|BAD30928.1| pentatricopeptide (PPR)
repeat-containing protein-like protein [Oryza sativa
Japonica Group]
Length = 808
Score = 139 bits (350), Expect = 4e-31
Identities = 65/102 (63%), Positives = 82/102 (80%)
Frame = -2
Query: 306 GRELHAHMIQSGCEFSVSASNALITMYGRCGMVDDAYQVFETMRNCDLISYNAMIAAFGQ 127
GR+LHAH++Q G E S SA NAL+TMY +CG V+DA VF M N D +S+NAMI+A GQ
Sbjct: 455 GRQLHAHLVQCGFEASNSAGNALLTMYAKCGAVNDARLVFLVMPNLDSVSWNAMISALGQ 514
Query: 126 HGYGKKALELFDKMVVSGISPDRISFLSALSGCSHAGLLDEG 1
HG+G++ALELFD+MV GI PDRISFL+ L+ C+HAGL+DEG
Sbjct: 515 HGHGREALELFDQMVAEGIDPDRISFLTILTACNHAGLVDEG 556
>gb|EEE67500.1| hypothetical protein OsJ_24934 [Oryza sativa Japonica Group]
Length = 830
Score = 139 bits (350), Expect = 4e-31
Identities = 65/102 (63%), Positives = 82/102 (80%)
Frame = -2
Query: 306 GRELHAHMIQSGCEFSVSASNALITMYGRCGMVDDAYQVFETMRNCDLISYNAMIAAFGQ 127
GR+LHAH++Q G E S SA NAL+TMY +CG V+DA VF M N D +S+NAMI+A GQ
Sbjct: 453 GRQLHAHLVQCGFEASNSAGNALLTMYAKCGAVNDARLVFLVMPNLDSVSWNAMISALGQ 512
Query: 126 HGYGKKALELFDKMVVSGISPDRISFLSALSGCSHAGLLDEG 1
HG+G++ALELFD+MV GI PDRISFL+ L+ C+HAGL+DEG
Sbjct: 513 HGHGREALELFDQMVAEGIDPDRISFLTILTACNHAGLVDEG 554
>ref|XP_003560023.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Brachypodium distachyon]
Length = 804
Score = 136 bits (343), Expect = 3e-30
Identities = 64/102 (62%), Positives = 81/102 (79%)
Frame = -2
Query: 306 GRELHAHMIQSGCEFSVSASNALITMYGRCGMVDDAYQVFETMRNCDLISYNAMIAAFGQ 127
G++LHAH++Q G E S SA NAL+TMY RCG V DA VF M N D +S+NAMI+A GQ
Sbjct: 451 GKQLHAHLVQCGFEASNSAGNALLTMYARCGAVKDARLVFLVMPNVDSVSWNAMISALGQ 510
Query: 126 HGYGKKALELFDKMVVSGISPDRISFLSALSGCSHAGLLDEG 1
HG+G++ALELFD+MV GI PDRISFL+ L+ C+HAGL+D+G
Sbjct: 511 HGHGREALELFDQMVAQGIYPDRISFLTILTACNHAGLVDDG 552
>gb|EMT12987.1| hypothetical protein F775_06874 [Aegilops tauschii]
Length = 680
Score = 135 bits (341), Expect = 4e-30
Identities = 64/102 (62%), Positives = 81/102 (79%)
Frame = -2
Query: 306 GRELHAHMIQSGCEFSVSASNALITMYGRCGMVDDAYQVFETMRNCDLISYNAMIAAFGQ 127
G +LHAH+++ G E S SA NAL+TMYG+CG V DA VF M N D +S+NAMIAA GQ
Sbjct: 323 GMQLHAHIVRCGFEASNSAGNALLTMYGKCGAVKDARLVFLVMPNVDSVSWNAMIAALGQ 382
Query: 126 HGYGKKALELFDKMVVSGISPDRISFLSALSGCSHAGLLDEG 1
HG+G++AL+LFD+MV GI PDRISFL+ L+ C+HAGL+DEG
Sbjct: 383 HGHGREALDLFDQMVAKGIYPDRISFLTILTACNHAGLVDEG 424
>tpg|DAA63384.1| TPA: hypothetical protein ZEAMMB73_689576 [Zea mays]
Length = 802
Score = 134 bits (337), Expect = 1e-29
Identities = 62/102 (60%), Positives = 81/102 (79%)
Frame = -2
Query: 306 GRELHAHMIQSGCEFSVSASNALITMYGRCGMVDDAYQVFETMRNCDLISYNAMIAAFGQ 127
G++LH H++Q G E S SA NALITMY RCG V +A+ +F M N D +S+NAMI+A GQ
Sbjct: 449 GKQLHGHIVQLGFEGSNSAGNALITMYARCGAVKEAHLMFLVMPNIDSVSWNAMISALGQ 508
Query: 126 HGYGKKALELFDKMVVSGISPDRISFLSALSGCSHAGLLDEG 1
HG+G++ALELFD+MV GI PDRISFL+ L+ C+H+GL+DEG
Sbjct: 509 HGHGREALELFDRMVAEGIYPDRISFLTVLTACNHSGLVDEG 550
>ref|XP_004959800.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Setaria italica]
Length = 943
Score = 133 bits (335), Expect = 2e-29
Identities = 62/102 (60%), Positives = 81/102 (79%)
Frame = -2
Query: 306 GRELHAHMIQSGCEFSVSASNALITMYGRCGMVDDAYQVFETMRNCDLISYNAMIAAFGQ 127
G++LH H++Q G E S SA NALITMY +CG V +A+ VF M N D +S+NAMI+A GQ
Sbjct: 590 GKQLHGHLVQLGFEGSNSAGNALITMYAKCGAVKEAHLVFLVMPNVDSVSWNAMISALGQ 649
Query: 126 HGYGKKALELFDKMVVSGISPDRISFLSALSGCSHAGLLDEG 1
HG+G++AL+LFD+MV GI PDRISFL+ L+ C+HAGL+DEG
Sbjct: 650 HGHGREALDLFDQMVSEGIYPDRISFLTVLTACNHAGLVDEG 691
>ref|XP_002463110.1| hypothetical protein SORBIDRAFT_02g037960 [Sorghum bicolor]
gi|241926487|gb|EER99631.1| hypothetical protein
SORBIDRAFT_02g037960 [Sorghum bicolor]
Length = 802
Score = 133 bits (334), Expect = 3e-29
Identities = 62/102 (60%), Positives = 80/102 (78%)
Frame = -2
Query: 306 GRELHAHMIQSGCEFSVSASNALITMYGRCGMVDDAYQVFETMRNCDLISYNAMIAAFGQ 127
G++LH H++Q G E S SA NALITMY RCG V +A +F M N D +S+NAMI+A GQ
Sbjct: 449 GKQLHGHLVQLGFEGSNSAGNALITMYARCGAVKEANLMFLVMPNIDSVSWNAMISALGQ 508
Query: 126 HGYGKKALELFDKMVVSGISPDRISFLSALSGCSHAGLLDEG 1
HG+G++ALELFD+MV GI PDRISFL+ L+ C+H+GL+DEG
Sbjct: 509 HGHGREALELFDRMVAEGIYPDRISFLTVLTACNHSGLVDEG 550
>ref|XP_006473595.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like isoform X1 [Citrus sinensis]
gi|568839239|ref|XP_006473596.1| PREDICTED:
pentatricopeptide repeat-containing protein
At1g25360-like isoform X2 [Citrus sinensis]
Length = 799
Score = 132 bits (332), Expect = 5e-29
Identities = 66/127 (51%), Positives = 88/127 (69%)
Frame = -2
Query: 381 ENFETEEYIXXXXXXXXXXXXXLDLGRELHAHMIQSGCEFSVSASNALITMYGRCGMVDD 202
E FE +Y L+ GR+LHA ++ SG + S+SA NALITMY RCG+V+
Sbjct: 421 EGFEPCDYAFAGAITSCAGLGALENGRQLHAQLVHSGYDSSLSAGNALITMYARCGVVEA 480
Query: 201 AYQVFETMRNCDLISYNAMIAAFGQHGYGKKALELFDKMVVSGISPDRISFLSALSGCSH 22
A +VF TM N D +S+NAMIAA GQHG G +A+EL+++M+ GI PDRI+FL+ LS C+H
Sbjct: 481 ANRVFHTMPNVDSVSWNAMIAALGQHGNGAQAIELYEQMLKEGILPDRITFLTVLSACNH 540
Query: 21 AGLLDEG 1
AGL+ EG
Sbjct: 541 AGLVKEG 547
Score = 75.5 bits (184), Expect = 7e-12
Identities = 40/138 (28%), Positives = 73/138 (52%), Gaps = 35/138 (25%)
Frame = -2
Query: 309 LGRELHAHMIQSGC----EFSVSASNALITMYGRCGMVDDAYQVFETMRNCDLISYNAMI 142
LG+++HA+++++ EFS+ +NAL+T+Y +CG V++A +F M DL+S+NA++
Sbjct: 309 LGKQVHAYLLRTEAKPTPEFSLPVNNALVTLYWKCGKVNEARDIFNQMPERDLVSWNAIL 368
Query: 141 AAF-------------------------------GQHGYGKKALELFDKMVVSGISPDRI 55
+A+ Q+GYG++ L+LF +M + G P
Sbjct: 369 SAYVSAGLIDEAKSLFGTMRERNLLTWTVMISGLAQNGYGEEGLKLFSQMRLEGFEPCDY 428
Query: 54 SFLSALSGCSHAGLLDEG 1
+F A++ C+ G L+ G
Sbjct: 429 AFAGAITSCAGLGALENG 446
>ref|XP_006435103.1| hypothetical protein CICLE_v10000322mg [Citrus clementina]
gi|557537225|gb|ESR48343.1| hypothetical protein
CICLE_v10000322mg [Citrus clementina]
Length = 799
Score = 129 bits (325), Expect = 3e-28
Identities = 61/102 (59%), Positives = 80/102 (78%)
Frame = -2
Query: 306 GRELHAHMIQSGCEFSVSASNALITMYGRCGMVDDAYQVFETMRNCDLISYNAMIAAFGQ 127
GR+LHA ++ SG + S+SA NALITMY RCG+V+ A VF TM N D +S+NAMIAA GQ
Sbjct: 446 GRQLHAQLVHSGYDSSLSAGNALITMYARCGVVEAANCVFNTMPNVDSVSWNAMIAALGQ 505
Query: 126 HGYGKKALELFDKMVVSGISPDRISFLSALSGCSHAGLLDEG 1
HG G +A+EL+++M+ GI PDRI+FL+ LS C+HAGL+ EG
Sbjct: 506 HGNGARAIELYEQMLKEGILPDRITFLTVLSACNHAGLVKEG 547
Score = 75.9 bits (185), Expect = 5e-12
Identities = 40/138 (28%), Positives = 72/138 (52%), Gaps = 35/138 (25%)
Frame = -2
Query: 309 LGRELHAHMIQSGC----EFSVSASNALITMYGRCG------------------------ 214
LG+++HA+++++ EFS+ +NAL+T+Y +CG
Sbjct: 309 LGKQVHAYLLRTEAKRTPEFSLPVNNALVTLYWKCGKVNEARDIFNQMPERDLVSWNAIL 368
Query: 213 -------MVDDAYQVFETMRNCDLISYNAMIAAFGQHGYGKKALELFDKMVVSGISPDRI 55
++D+A +FE MR +L+S+ MI+ Q+GYG++ L+LF +M + G P
Sbjct: 369 SAYVSAGLIDEAKSLFEAMRERNLLSWTVMISGLAQNGYGEEGLKLFSQMRLEGFKPCDY 428
Query: 54 SFLSALSGCSHAGLLDEG 1
+F A++ C+ G L+ G
Sbjct: 429 AFAGAITSCAGLGALENG 446
>ref|XP_002521664.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223539055|gb|EEF40651.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 574
Score = 129 bits (323), Expect = 5e-28
Identities = 65/129 (50%), Positives = 88/129 (68%)
Frame = -2
Query: 387 KKENFETEEYIXXXXXXXXXXXXXLDLGRELHAHMIQSGCEFSVSASNALITMYGRCGMV 208
K FE +Y L+ GR+LHA +++ G + S+SA NALITMY RCG+V
Sbjct: 421 KLRGFEPCDYAFAGAITSCSMLGLLEHGRQLHAQLVRFGFDSSLSAGNALITMYARCGVV 480
Query: 207 DDAYQVFETMRNCDLISYNAMIAAFGQHGYGKKALELFDKMVVSGISPDRISFLSALSGC 28
+ A +F +M D +S+NAMIAA GQHGYG +A+ELF++M++ GI PDRI+FL+ LS C
Sbjct: 481 EAARTLFLSMPCVDSVSWNAMIAALGQHGYGVQAIELFEEMLIEGILPDRITFLTVLSAC 540
Query: 27 SHAGLLDEG 1
SHAGL+ EG
Sbjct: 541 SHAGLVKEG 549
Score = 75.1 bits (183), Expect = 9e-12
Identities = 41/137 (29%), Positives = 72/137 (52%), Gaps = 35/137 (25%)
Frame = -2
Query: 306 GRELHAHMIQSGC----EFSVSASNALITMYGRCGMVDDAYQVFETMRNCDLISYN---- 151
G+++HA+++++ +FS+ +NAL+T+Y +CG VD+A +VF M DL+S+N
Sbjct: 312 GKQVHAYILKTEAMPSPDFSLPVNNALVTLYWKCGKVDEAQEVFNNMPVRDLVSWNTILS 371
Query: 150 ---------------------------AMIAAFGQHGYGKKALELFDKMVVSGISPDRIS 52
MI+ Q+G+G++ L+LF++M + G P +
Sbjct: 372 GYLNAGRMDEAKTFFEEMPEKNILSWVVMISGLAQNGFGEEGLKLFNQMKLRGFEPCDYA 431
Query: 51 FLSALSGCSHAGLLDEG 1
F A++ CS GLL+ G
Sbjct: 432 FAGAITSCSMLGLLEHG 448
Score = 61.2 bits (147), Expect = 1e-07
Identities = 38/141 (26%), Positives = 65/141 (46%), Gaps = 40/141 (28%)
Frame = -2
Query: 303 RELHAHMIQSGCEFSVSASNALITMYGRCGM----------------------------- 211
++LH +++SG F S NALI++Y +C
Sbjct: 172 QQLHCTVVKSGTWFVTSVLNALISVYVKCASSPSVISSSLMGAARRLFDEMPVRDELSWT 231
Query: 210 -----------VDDAYQVFETMRNCDLISYNAMIAAFGQHGYGKKALELFDKMVVSGISP 64
+D A +VF+ MR ++ +NAMI+ + G ++ALE+F KM ++G+
Sbjct: 232 TIITGYVKNDDLDAAREVFDGMREKLVVVWNAMISGYMHRGLYQEALEMFRKMYLAGLKL 291
Query: 63 DRISFLSALSGCSHAGLLDEG 1
D ++ S +S C++AG L G
Sbjct: 292 DEFTYTSIISACANAGFLQHG 312
>gb|EOY05619.1| Pentatricopeptide repeat (PPR) superfamily protein [Theobroma
cacao]
Length = 788
Score = 128 bits (322), Expect = 7e-28
Identities = 67/129 (51%), Positives = 86/129 (66%)
Frame = -2
Query: 387 KKENFETEEYIXXXXXXXXXXXXXLDLGRELHAHMIQSGCEFSVSASNALITMYGRCGMV 208
K E FE +Y L GR+LHA +++ G + S+SA NALITMY RCG V
Sbjct: 408 KSEGFEPCDYSFAGAITSCAMLGALKHGRQLHAQLVRLGFDSSLSAGNALITMYARCGAV 467
Query: 207 DDAYQVFETMRNCDLISYNAMIAAFGQHGYGKKALELFDKMVVSGISPDRISFLSALSGC 28
+ A +F TM D +S+NAMIAA GQHG+G +ALELF++M+ GI PDRI+FL+ LS C
Sbjct: 468 EAASVLFHTMPCVDSVSWNAMIAALGQHGHGVQALELFEQMLKEGILPDRITFLTVLSAC 527
Query: 27 SHAGLLDEG 1
SHAGL+ EG
Sbjct: 528 SHAGLVKEG 536
Score = 67.4 bits (163), Expect = 2e-09
Identities = 41/138 (29%), Positives = 69/138 (50%), Gaps = 35/138 (25%)
Frame = -2
Query: 309 LGRELHAHMIQSGC----EFSVSASNALITMYGRCGMVDDAYQVFETMRNCDLISYNA-- 148
LG+++HA+++++ +FS+ +NAL+T+Y +C VD A +VF M DL+S+NA
Sbjct: 298 LGQQVHAYVLRTEGKPTPDFSLPVNNALVTLYWKCDKVDWAREVFNNMPVRDLVSWNAIL 357
Query: 147 -----------------------------MIAAFGQHGYGKKALELFDKMVVSGISPDRI 55
MI+ Q+G+G++ L+LF++M G P
Sbjct: 358 SGYVNAGRIDEGMSFFREMPERNLLTWIVMISGLAQNGFGEEGLKLFNQMKSEGFEPCDY 417
Query: 54 SFLSALSGCSHAGLLDEG 1
SF A++ C+ G L G
Sbjct: 418 SFAGAITSCAMLGALKHG 435
Score = 66.6 bits (161), Expect = 3e-09
Identities = 38/132 (28%), Positives = 64/132 (48%), Gaps = 31/132 (23%)
Frame = -2
Query: 303 RELHAHMIQSGCEFSVSASNALITMYGRCGMVDDAYQVFETMRNCDLISY---------- 154
+++H + +SG F S NAL+++Y C ++ +A ++F+ M D +S+
Sbjct: 168 KQMHCTVFKSGTVFVTSVLNALVSVYVNCTLMFEARKLFDEMSEKDELSWTTMVTGYVKN 227
Query: 153 ---------------------NAMIAAFGQHGYGKKALELFDKMVVSGISPDRISFLSAL 37
NAMI+ + HG ++AL++F KM GI D ++ S +
Sbjct: 228 DELDAARELVDGMNEKLAVAWNAMISGYVHHGRYEEALDMFRKMYFMGIKMDEFTYTSII 287
Query: 36 SGCSHAGLLDEG 1
SGC+HAGL G
Sbjct: 288 SGCAHAGLFQLG 299
>ref|XP_002302000.2| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|550344162|gb|EEE81273.2|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 797
Score = 127 bits (320), Expect = 1e-27
Identities = 67/129 (51%), Positives = 86/129 (66%)
Frame = -2
Query: 387 KKENFETEEYIXXXXXXXXXXXXXLDLGRELHAHMIQSGCEFSVSASNALITMYGRCGMV 208
K + FE +Y L GR+LHA +++ G E S+SA NALITMY RCG+V
Sbjct: 417 KLQGFEPCDYAFAGAIISCSVLGSLKHGRQLHAQVVRYGYESSLSAGNALITMYARCGVV 476
Query: 207 DDAYQVFETMRNCDLISYNAMIAAFGQHGYGKKALELFDKMVVSGISPDRISFLSALSGC 28
D A+ +F M D IS+NAMIAA GQHG G +A+ELF++M+ GI PDRISFL+ +S C
Sbjct: 477 DAAHCLFINMPCVDAISWNAMIAALGQHGQGTQAIELFEEMLKEGILPDRISFLTVISAC 536
Query: 27 SHAGLLDEG 1
SHAGL+ EG
Sbjct: 537 SHAGLVKEG 545
Score = 63.2 bits (152), Expect = 4e-08
Identities = 39/138 (28%), Positives = 64/138 (46%), Gaps = 35/138 (25%)
Frame = -2
Query: 309 LGRELHAHMIQSGC----EFSVSASNALITMYGRCGMVDDAYQVFETMRNCDLISYN--- 151
LG+E+HA+ +++ + ++ +NALIT Y +CG VD A ++F M DL+S+N
Sbjct: 307 LGKEMHAYFLKTVANPAPDVAMPVNNALITFYWKCGKVDIAQEIFNKMPERDLVSWNIIL 366
Query: 150 ----------------------------AMIAAFGQHGYGKKALELFDKMVVSGISPDRI 55
MI+ Q G+ ++AL+ F++M + G P
Sbjct: 367 SGYVNVRCMDEAKSFFNEMPEKNILSWIIMISGLAQIGFAEEALKFFNRMKLQGFEPCDY 426
Query: 54 SFLSALSGCSHAGLLDEG 1
+F A+ CS G L G
Sbjct: 427 AFAGAIISCSVLGSLKHG 444
>ref|XP_004167110.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
Length = 797
Score = 127 bits (319), Expect = 2e-27
Identities = 57/102 (55%), Positives = 81/102 (79%)
Frame = -2
Query: 306 GRELHAHMIQSGCEFSVSASNALITMYGRCGMVDDAYQVFETMRNCDLISYNAMIAAFGQ 127
GR+LHA ++ G E S+S NA+I+MY +CG+V+ A VF TM + DL+S+N+MIAA GQ
Sbjct: 444 GRQLHAQLVHLGYESSLSVGNAMISMYAKCGVVEAAESVFVTMPSVDLVSWNSMIAALGQ 503
Query: 126 HGYGKKALELFDKMVVSGISPDRISFLSALSGCSHAGLLDEG 1
HG+G KA+ELFD+M+ G+ PDRI+FL+ L+ CSHAGL+++G
Sbjct: 504 HGHGVKAIELFDQMLKEGVFPDRITFLTVLTACSHAGLVEKG 545
Score = 62.4 bits (150), Expect = 6e-08
Identities = 39/138 (28%), Positives = 68/138 (49%), Gaps = 35/138 (25%)
Frame = -2
Query: 309 LGRELHAHMIQSGCE----FSVSASNALITMYGRCGMVDDAYQVFETMRNCDLISYNA-- 148
+G+++HA+++++ F +S SNALIT+Y + VD+A ++F M ++I++NA
Sbjct: 307 MGKQVHAYILKNELNPNHSFCLSVSNALITLYCKNNKVDEARKIFYAMPVRNIITWNAIL 366
Query: 147 -----------------------------MIAAFGQHGYGKKALELFDKMVVSGISPDRI 55
MI+ Q+G+G + L+LF +M + G P
Sbjct: 367 SGYVNAGRMEEAKSFFEEMPVKNLLTLTVMISGLAQNGFGDEGLKLFKQMRLDGFEPCDF 426
Query: 54 SFLSALSGCSHAGLLDEG 1
+F AL+ CS G L+ G
Sbjct: 427 AFAGALTACSVLGALENG 444
>ref|XP_004152765.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
Length = 797
Score = 127 bits (319), Expect = 2e-27
Identities = 57/102 (55%), Positives = 81/102 (79%)
Frame = -2
Query: 306 GRELHAHMIQSGCEFSVSASNALITMYGRCGMVDDAYQVFETMRNCDLISYNAMIAAFGQ 127
GR+LHA ++ G E S+S NA+I+MY +CG+V+ A VF TM + DL+S+N+MIAA GQ
Sbjct: 444 GRQLHAQLVHLGYESSLSVGNAMISMYAKCGVVEAAESVFVTMPSVDLVSWNSMIAALGQ 503
Query: 126 HGYGKKALELFDKMVVSGISPDRISFLSALSGCSHAGLLDEG 1
HG+G KA+ELFD+M+ G+ PDRI+FL+ L+ CSHAGL+++G
Sbjct: 504 HGHGVKAIELFDQMLKEGVFPDRITFLTVLTACSHAGLVEKG 545
Score = 62.8 bits (151), Expect = 5e-08
Identities = 39/138 (28%), Positives = 68/138 (49%), Gaps = 35/138 (25%)
Frame = -2
Query: 309 LGRELHAHMIQSGCE----FSVSASNALITMYGRCGMVDDAYQVFETMRNCDLISYNA-- 148
+G+++HA+++++ F +S SNALIT+Y + VD+A ++F M ++I++NA
Sbjct: 307 MGKQMHAYILKNELNPNHSFCLSVSNALITLYCKNNKVDEARKIFYAMPVRNIITWNAIL 366
Query: 147 -----------------------------MIAAFGQHGYGKKALELFDKMVVSGISPDRI 55
MI+ Q+G+G + L+LF +M + G P
Sbjct: 367 SGYVNAGRMEEAKSFFEEMPVKNLLTLTVMISGLAQNGFGDEGLKLFKQMRLDGFEPCDF 426
Query: 54 SFLSALSGCSHAGLLDEG 1
+F AL+ CS G L+ G
Sbjct: 427 AFAGALTACSVLGALENG 444
>ref|XP_002893429.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297339271|gb|EFH69688.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 790
Score = 126 bits (316), Expect = 3e-27
Identities = 59/129 (45%), Positives = 89/129 (68%)
Frame = -2
Query: 387 KKENFETEEYIXXXXXXXXXXXXXLDLGRELHAHMIQSGCEFSVSASNALITMYGRCGMV 208
K+E FE +Y G++ HA +++ G + S+SA NALITMY +CG+V
Sbjct: 409 KREGFEPCDYAFSGAIKSCAVLGAYCNGQQFHAQLVKIGFDSSLSAGNALITMYAKCGVV 468
Query: 207 DDAYQVFETMRNCDLISYNAMIAAFGQHGYGKKALELFDKMVVSGISPDRISFLSALSGC 28
++A QVF TM D +S+NA+IAA GQHG+G +A++++++M+ GI PDRI+FL+ L+ C
Sbjct: 469 EEAQQVFRTMPCLDSVSWNALIAALGQHGHGVEAVDVYEEMLKKGIRPDRITFLTVLTAC 528
Query: 27 SHAGLLDEG 1
SHAGL+D+G
Sbjct: 529 SHAGLVDQG 537
Score = 60.5 bits (145), Expect = 2e-07
Identities = 32/103 (31%), Positives = 63/103 (61%)
Frame = -2
Query: 309 LGRELHAHMIQSGCEFSVSASNALITMYGRCGMVDDAYQVFETMRNCDLISYNAMIAAFG 130
LG+++HA++++ +FS N+L+T+Y +CG ++A +FE M DL+S+NA+++ +
Sbjct: 304 LGKQVHAYVLRRE-DFSFHFDNSLVTLYYKCGKFNEARAIFEKMPAKDLVSWNALLSGYV 362
Query: 129 QHGYGKKALELFDKMVVSGISPDRISFLSALSGCSHAGLLDEG 1
G+ +A +F +M I +S++ +SG + G +EG
Sbjct: 363 SSGHIGEAKLIFKEMKEKNI----LSWMIMISGLAENGFGEEG 401
>gb|EMJ17324.1| hypothetical protein PRUPE_ppa018932mg [Prunus persica]
Length = 689
Score = 125 bits (315), Expect = 4e-27
Identities = 65/129 (50%), Positives = 86/129 (66%)
Frame = -2
Query: 387 KKENFETEEYIXXXXXXXXXXXXXLDLGRELHAHMIQSGCEFSVSASNALITMYGRCGMV 208
+ E FE +Y L+ GR+LHA +I G + S+SA+NALITMY RCG+
Sbjct: 309 RSEGFEPCDYAFSGAITSCAALGALEHGRQLHAQLISLGFDSSLSAANALITMYARCGVF 368
Query: 207 DDAYQVFETMRNCDLISYNAMIAAFGQHGYGKKALELFDKMVVSGISPDRISFLSALSGC 28
+DA VF TM D +S+NAMIAA QHG+G +A++LF+KM+ + I PDRI+FL LS C
Sbjct: 369 EDANSVFLTMPYIDSVSWNAMIAALAQHGHGVQAIDLFEKMLKADILPDRITFLIILSAC 428
Query: 27 SHAGLLDEG 1
SHAGL+ EG
Sbjct: 429 SHAGLVKEG 437
Score = 69.3 bits (168), Expect = 5e-10
Identities = 39/138 (28%), Positives = 71/138 (51%), Gaps = 35/138 (25%)
Frame = -2
Query: 309 LGRELHAHMIQSGC----EFSVSASNALITMYGRCGMVDDAYQVFETMRNCDLISYNA-- 148
LG+++HA+++++ +FS+S +N L+T+Y +CG +D+A +F M DL+S+NA
Sbjct: 199 LGKQVHAYILRTEAKPTVDFSLSVNNTLLTLYYKCGKLDEARYIFNNMPVKDLVSWNAIL 258
Query: 147 -----------------------------MIAAFGQHGYGKKALELFDKMVVSGISPDRI 55
MI+ Q+G G++A++LF++M G P
Sbjct: 259 SGYVSAGRIQEAKSFFKEMPERSILTWTVMISGLAQNGLGEEAMKLFNQMRSEGFEPCDY 318
Query: 54 SFLSALSGCSHAGLLDEG 1
+F A++ C+ G L+ G
Sbjct: 319 AFSGAITSCAALGALEHG 336
>ref|XP_006306802.1| hypothetical protein CARUB_v10008344mg [Capsella rubella]
gi|482575513|gb|EOA39700.1| hypothetical protein
CARUB_v10008344mg [Capsella rubella]
Length = 790
Score = 125 bits (313), Expect = 8e-27
Identities = 59/129 (45%), Positives = 88/129 (68%)
Frame = -2
Query: 387 KKENFETEEYIXXXXXXXXXXXXXLDLGRELHAHMIQSGCEFSVSASNALITMYGRCGMV 208
KKE FE +Y G++ HA +++ G + S+SA NALITMY +CG+V
Sbjct: 409 KKEGFEPCDYAFSGAIKSCAVLGAYCNGQQFHAQLVKIGFDSSLSAGNALITMYAKCGVV 468
Query: 207 DDAYQVFETMRNCDLISYNAMIAAFGQHGYGKKALELFDKMVVSGISPDRISFLSALSGC 28
D+A QVF T+ D +S+NA+IAA GQHG+G +A++++++M+ GI PDRI+ L+ L+ C
Sbjct: 469 DEARQVFRTIPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKEGIRPDRITLLTVLTAC 528
Query: 27 SHAGLLDEG 1
SHAGL+D+G
Sbjct: 529 SHAGLVDQG 537
Score = 59.7 bits (143), Expect = 4e-07
Identities = 31/103 (30%), Positives = 63/103 (61%)
Frame = -2
Query: 309 LGRELHAHMIQSGCEFSVSASNALITMYGRCGMVDDAYQVFETMRNCDLISYNAMIAAFG 130
LG+++HA++++ +FS N+L+++Y +CG D+A +FE M DL+S+NA+++ +
Sbjct: 304 LGKQVHAYVLRRE-DFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYV 362
Query: 129 QHGYGKKALELFDKMVVSGISPDRISFLSALSGCSHAGLLDEG 1
G+ +A +F +M I ++++ +SG + G +EG
Sbjct: 363 SSGHIGEAKLIFKEMKEKNI----LTWMIMISGLAENGFGEEG 401
>ref|XP_002280360.1| PREDICTED: pentatricopeptide repeat-containing protein At1g25360
[Vitis vinifera]
Length = 799
Score = 125 bits (313), Expect = 8e-27
Identities = 65/129 (50%), Positives = 87/129 (67%)
Frame = -2
Query: 387 KKENFETEEYIXXXXXXXXXXXXXLDLGRELHAHMIQSGCEFSVSASNALITMYGRCGMV 208
K E FE +Y L GR+LHA +++ G + S+SA NALITMY +CG+V
Sbjct: 419 KSEGFEPCDYAFAGAIIACAWLAALMHGRQLHAQLVRLGFDSSLSAGNALITMYAKCGVV 478
Query: 207 DDAYQVFETMRNCDLISYNAMIAAFGQHGYGKKALELFDKMVVSGISPDRISFLSALSGC 28
+ A+ +F TM D +S+NAMIAA GQHG+G +ALELF+ M+ I PDRI+FL+ LS C
Sbjct: 479 EAAHCLFLTMPYLDSVSWNAMIAALGQHGHGAQALELFELMLKEDILPDRITFLTVLSTC 538
Query: 27 SHAGLLDEG 1
SHAGL++EG
Sbjct: 539 SHAGLVEEG 547
Score = 69.3 bits (168), Expect = 5e-10
Identities = 41/137 (29%), Positives = 69/137 (50%), Gaps = 35/137 (25%)
Frame = -2
Query: 306 GRELHAHMIQS----GCEFSVSASNALITMYGRCGMVDDAYQVFETMRNCDLISYNA--- 148
G+++HA+++++ +FS+S +NAL T+Y +CG VD+A QVF M DL+S+NA
Sbjct: 310 GKQVHAYILRTEPRPSLDFSLSVNNALATLYWKCGKVDEARQVFNQMPVKDLVSWNAILS 369
Query: 147 ----------------------------MIAAFGQHGYGKKALELFDKMVVSGISPDRIS 52
MI+ Q+G+G+++L+LF++M G P +
Sbjct: 370 GYVNAGRIDEAKSFFEEMPERNLLTWTVMISGLAQNGFGEESLKLFNRMKSEGFEPCDYA 429
Query: 51 FLSALSGCSHAGLLDEG 1
F A+ C+ L G
Sbjct: 430 FAGAIIACAWLAALMHG 446
Score = 57.8 bits (138), Expect = 1e-06
Identities = 30/80 (37%), Positives = 47/80 (58%)
Frame = -2
Query: 240 LITMYGRCGMVDDAYQVFETMRNCDLISYNAMIAAFGQHGYGKKALELFDKMVVSGISPD 61
+I Y R G +D A Q + M ++++NAMI+ + HG+ +ALE+F KM + GI D
Sbjct: 231 MIAGYVRNGELDAARQFLDGMTEKLVVAWNAMISGYVHHGFFLEALEMFRKMYLLGIQWD 290
Query: 60 RISFLSALSGCSHAGLLDEG 1
++ S LS C++AG G
Sbjct: 291 EFTYTSVLSACANAGFFLHG 310
>ref|XP_006841418.1| hypothetical protein AMTR_s00003p00032470 [Amborella trichopoda]
gi|548843439|gb|ERN03093.1| hypothetical protein
AMTR_s00003p00032470 [Amborella trichopoda]
Length = 791
Score = 124 bits (310), Expect = 2e-26
Identities = 57/102 (55%), Positives = 77/102 (75%)
Frame = -2
Query: 306 GRELHAHMIQSGCEFSVSASNALITMYGRCGMVDDAYQVFETMRNCDLISYNAMIAAFGQ 127
G +LHA +IQ G + SVSA NAL+TMY RCG V+ A + F M D +S+NAMIAA GQ
Sbjct: 438 GAQLHAQLIQLGLDASVSAGNALMTMYARCGAVESAERAFRVMPTPDAVSWNAMIAALGQ 497
Query: 126 HGYGKKALELFDKMVVSGISPDRISFLSALSGCSHAGLLDEG 1
HG G +A+ LF++M+V+G PDR++FL+ LS CSH+GL++EG
Sbjct: 498 HGRGSEAIMLFERMLVAGYKPDRVTFLTVLSSCSHSGLVNEG 539
Score = 68.9 bits (167), Expect = 6e-10
Identities = 34/102 (33%), Positives = 62/102 (60%)
Frame = -2
Query: 306 GRELHAHMIQSGCEFSVSASNALITMYGRCGMVDDAYQVFETMRNCDLISYNAMIAAFGQ 127
G E HA+++ E S+ NA+I++Y +CG ++ A +VF+ MR DL+S+NA+++ +
Sbjct: 306 GMEAHAYIVHREAEISLPVWNAIISLYAKCGRMEVAMRVFDAMREKDLVSWNAVVSGYAT 365
Query: 126 HGYGKKALELFDKMVVSGISPDRISFLSALSGCSHAGLLDEG 1
G +A E+F+KM I + +++ +SG + G +EG
Sbjct: 366 LGMITEAREIFEKM----IERNELTWTVMISGSAQHGQGEEG 403
Score = 63.9 bits (154), Expect = 2e-08
Identities = 37/96 (38%), Positives = 55/96 (57%), Gaps = 1/96 (1%)
Frame = -2
Query: 288 HMIQSGCEFSVSASNALITMYGRCGMVDDAYQVFETMRNCDLISYNAMIAAFGQHGYGKK 109
H+ + V A L+ + R G + A+Q+F+ M D ++YNAMI+A+G HG ++
Sbjct: 78 HVFDRMPQRDVVARTTLLAAHARSGALAVAHQIFDEMPTRDAVAYNAMISAYGHHGEFRE 137
Query: 108 ALELFDKMVVSG-ISPDRISFLSALSGCSHAGLLDE 4
AL LF M+ G PD +F +ALS C AGL D+
Sbjct: 138 ALSLFRAMLEQGKPRPDGFTFTAALSAC--AGLEDQ 171
Score = 60.1 bits (144), Expect = 3e-07
Identities = 32/80 (40%), Positives = 49/80 (61%)
Frame = -2
Query: 240 LITMYGRCGMVDDAYQVFETMRNCDLISYNAMIAAFGQHGYGKKALELFDKMVVSGISPD 61
+IT + R G ++ A +VFE MR+ +++NAMIA + QHG +AL+LF M I D
Sbjct: 227 MITGFVRIGDLEGARRVFEVMRDRFDVAWNAMIAGYAQHGLCMEALDLFRDMFGKDIMLD 286
Query: 60 RISFLSALSGCSHAGLLDEG 1
++ S LS C++ GL+ G
Sbjct: 287 EFTYTSLLSACANIGLVRTG 306