BLASTX nr result

ID: Ephedra28_contig00029889 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00029889
         (485 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EMJ25793.1| hypothetical protein PRUPE_ppa027169mg [Prunus pe...    59   9e-07
ref|XP_002519626.1| conserved hypothetical protein [Ricinus comm...    55   7e-06

>gb|EMJ25793.1| hypothetical protein PRUPE_ppa027169mg [Prunus persica]
          Length = 360

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 36/118 (30%), Positives = 56/118 (47%), Gaps = 3/118 (2%)
 Frame = -1

Query: 398 AVHENDSPKPGKKQRFVKLKSYKTFKRSSYEPDPEALRVEDEERKKRRHAQAEEEIG--- 228
           A  +N+ P+P  K++     S +T   SS++ + +   +    + + +H Q     G   
Sbjct: 113 ANQDNEDPQPPAKRQ-----SQQTLPPSSHDHEDQLHPLPHGTQGQPQHGQRPHPHGLLR 167

Query: 227 PPETDTPVLAWCFAILCMVLAVLVIMGGLAVLIGYLAFSPHIPTFTVDNGALQSLELD 54
           P    T +  W  AI C +  V++I+GGL VLI YL F P  P F V    L +  LD
Sbjct: 168 PHTQQTNLFQWSLAIFCAIFWVIIIIGGLVVLIVYLIFRPRTPKFDVSTATLNAAYLD 225


>ref|XP_002519626.1| conserved hypothetical protein [Ricinus communis]
           gi|223541216|gb|EEF42771.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 254

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 34/110 (30%), Positives = 53/110 (48%), Gaps = 2/110 (1%)
 Frame = -1

Query: 377 PKPGKKQRFVKLKSYKTF--KRSSYEPDPEALRVEDEERKKRRHAQAEEEIGPPETDTPV 204
           P P KK R V +   +    K+   +P   A+ +   ERK+ R   + +   P  T+  V
Sbjct: 13  PPPEKKLRDVPVPPNRIVISKQPGIQPSSTAVDIPSSERKRSRKQPSLQHPRPRRTNPVV 72

Query: 203 LAWCFAILCMVLAVLVIMGGLAVLIGYLAFSPHIPTFTVDNGALQSLELD 54
             W  A+LC++ ++ +I  G+A LI YLA  P  P F   N  L ++  D
Sbjct: 73  --WFGAVLCLIFSLTLIFFGIATLIIYLAIKPRSPVFDTPNANLNNIYFD 120


Top