BLASTX nr result

ID: Ephedra28_contig00029859 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00029859
         (420 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002866715.1| hypothetical protein ARALYDRAFT_496882 [Arab...    57   2e-06
dbj|BAJ53192.1| JHL03K20.1 [Jatropha curcas]                           55   7e-06
ref|XP_006280643.1| hypothetical protein CARUB_v10026604mg [Caps...    55   1e-05
ref|XP_002523634.1| OTU domain-containing protein, putative [Ric...    55   1e-05

>ref|XP_002866715.1| hypothetical protein ARALYDRAFT_496882 [Arabidopsis lyrata subsp.
           lyrata] gi|297312550|gb|EFH42974.1| hypothetical protein
           ARALYDRAFT_496882 [Arabidopsis lyrata subsp. lyrata]
          Length = 374

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 32/72 (44%), Positives = 41/72 (56%), Gaps = 4/72 (5%)
 Frame = -1

Query: 420 QESKSNTN---VESSLKNQVSNKKAARNKPCPCGSNKKNKACCENIAPKSNTK-TSSQID 253
           +ES S TN   V +  ++Q  +KK  RNK CPCGS KK K+CC   A +S+ K   SQ  
Sbjct: 286 KESASCTNNKTVHAKCRSQTDDKKIPRNKTCPCGSKKKYKSCCGTAAGRSSVKLLVSQTT 345

Query: 252 VSNNGKKQRHRG 217
            S  G+K   RG
Sbjct: 346 ESKKGRKNLRRG 357


>dbj|BAJ53192.1| JHL03K20.1 [Jatropha curcas]
          Length = 397

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 30/71 (42%), Positives = 42/71 (59%), Gaps = 3/71 (4%)
 Frame = -1

Query: 390 SSLKNQVSNKKAARNKPCPCGSNKKNKACC--ENIAPKSNTKTSSQIDVSNNGKKQRHRG 217
           +S  +Q  +KK  RNK CPCGS KK K+CC   N AP + +     +D S  G+K+R +G
Sbjct: 313 NSTSSQADDKKIPRNKSCPCGSKKKYKSCCGAVNRAPSAKSTVEQSLD-SRKGRKERKQG 371

Query: 216 NAPG-DDSKSL 187
              G  +S+SL
Sbjct: 372 KKGGRPESESL 382


>ref|XP_006280643.1| hypothetical protein CARUB_v10026604mg [Capsella rubella]
           gi|482549347|gb|EOA13541.1| hypothetical protein
           CARUB_v10026604mg [Capsella rubella]
          Length = 376

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 29/80 (36%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
 Frame = -1

Query: 396 VESSLKNQVSNKKAARNKPCPCGSNKKNKACCENIAPKSNTK-TSSQIDVSNNGKKQRHR 220
           V +   +Q+ +KK  RNK CPCGS +K K+CC     +S+ K   SQ   S  G+K   R
Sbjct: 299 VHAKCSSQIDDKKVPRNKSCPCGSKRKYKSCCGTATGRSSVKLLVSQTMESKKGRKNTRR 358

Query: 219 GNAPGDDSKSLNSSLGTLHI 160
           G +  D+ +++   +G L I
Sbjct: 359 GTS--DEVEAIAPDVGALCI 376


>ref|XP_002523634.1| OTU domain-containing protein, putative [Ricinus communis]
           gi|223537196|gb|EEF38829.1| OTU domain-containing
           protein, putative [Ricinus communis]
          Length = 371

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 30/73 (41%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
 Frame = -1

Query: 402 TNVESSLKNQVSNKKAARNKPCPCGSNKKNKACCENIAPKSNTK--TSSQIDVSNNGKKQ 229
           TN  SS   Q  +KK ARNK CPCGS KK KACC  +  K + K   +  +D     K++
Sbjct: 292 TNGNSSC--QAGDKKIARNKTCPCGSKKKYKACCGAVKAKPSAKFLINQTVDSRKVKKER 349

Query: 228 RHRGNAPGDDSKS 190
           + RG  P +   S
Sbjct: 350 KQRGKGPAESDGS 362


Top