BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00029772
         (403 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABR17871.1| unknown [Picea sitchensis]                              79   6e-13
emb|CBI29620.3| unnamed protein product [Vitis vinifera]               76   5e-12
ref|XP_002269047.1| PREDICTED: uncharacterized mitochondrial pro...    76   5e-12
ref|XP_006485360.1| PREDICTED: uncharacterized mitochondrial pro...    74   2e-11
ref|XP_004231081.1| PREDICTED: uncharacterized mitochondrial pro...    73   4e-11
ref|XP_004300288.1| PREDICTED: uncharacterized mitochondrial pro...    72   6e-11
ref|XP_002329588.1| predicted protein [Populus trichocarpa]            71   1e-10
gb|EMJ10121.1| hypothetical protein PRUPE_ppb001514mg [Prunus pe...    70   2e-10
ref|XP_006364540.1| PREDICTED: uncharacterized mitochondrial pro...    70   3e-10
gb|EOY24103.1| Intron maturase isoform 4 [Theobroma cacao]             70   3e-10
gb|EOY24100.1| Intron maturase isoform 1 [Theobroma cacao] gi|50...    70   3e-10
gb|EPS73440.1| hypothetical protein M569_01312, partial [Genlise...    70   4e-10
ref|XP_004163762.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...    70   4e-10
ref|XP_004148504.1| PREDICTED: uncharacterized mitochondrial pro...    70   4e-10
gb|EXB57734.1| putative mitochondrial protein ymf11 [Morus notab...    69   5e-10
ref|NP_174294.1| protein NUCLEAR MATURASE 1 [Arabidopsis thalian...    69   5e-10
ref|XP_002528785.1| RNA binding protein, putative [Ricinus commu...    69   6e-10
ref|NP_199503.1| Intron maturase, type II family protein [Arabid...    68   1e-09
ref|XP_006837140.1| hypothetical protein AMTR_s00110p00142760 [A...    68   1e-09
ref|XP_002326494.1| predicted protein [Populus trichocarpa]            67   2e-09

>gb|ABR17871.1| unknown [Picea sitchensis]
          Length = 696

 Score = 79.0 bits (193), Expect = 6e-13
 Identities = 31/60 (51%), Positives = 46/60 (76%)
 Frame = +3

Query: 219 KEDPQNLMKEDGVDILTNLWIRSFKSPRAPVTDLNTFLERYELWVLAYQNIYADVAGELP 398
           KEDP  LMKEDG+ + +N+W++ FK+P   +T++  FL+R+ELWV+AYQ + AD  GE+P
Sbjct: 33  KEDPYTLMKEDGIQVCSNMWVQGFKNPMKMMTNVTGFLKRFELWVIAYQKVCADETGEIP 92


>emb|CBI29620.3| unnamed protein product [Vitis vinifera]
          Length = 730

 Score = 75.9 bits (185), Expect = 5e-12
 Identities = 36/75 (48%), Positives = 48/75 (64%)
 Frame = +3

Query: 165 FHFPVRFLFAVPGKQKNTKEDPQNLMKEDGVDILTNLWIRSFKSPRAPVTDLNTFLERYE 344
           F F   F FA   ++    +DP  LMKEDGV + + +WI +F+ P A VT+L +FL R+E
Sbjct: 53  FSFFRAFSFAAANRRTPDPDDPSTLMKEDGVALCSQMWIDNFRVPDATVTNLTSFLRRFE 112

Query: 345 LWVLAYQNIYADVAG 389
           LWVLAYQ + AD  G
Sbjct: 113 LWVLAYQKVCADEMG 127


>ref|XP_002269047.1| PREDICTED: uncharacterized mitochondrial protein ymf11-like [Vitis
           vinifera]
          Length = 749

 Score = 75.9 bits (185), Expect = 5e-12
 Identities = 36/75 (48%), Positives = 48/75 (64%)
 Frame = +3

Query: 165 FHFPVRFLFAVPGKQKNTKEDPQNLMKEDGVDILTNLWIRSFKSPRAPVTDLNTFLERYE 344
           F F   F FA   ++    +DP  LMKEDGV + + +WI +F+ P A VT+L +FL R+E
Sbjct: 56  FSFFRAFSFAAANRRTPDPDDPSTLMKEDGVALCSQMWIDNFRVPDATVTNLTSFLRRFE 115

Query: 345 LWVLAYQNIYADVAG 389
           LWVLAYQ + AD  G
Sbjct: 116 LWVLAYQKVCADEMG 130


>ref|XP_006485360.1| PREDICTED: uncharacterized mitochondrial protein ymf11-like isoform
           X1 [Citrus sinensis]
          Length = 730

 Score = 74.3 bits (181), Expect = 2e-11
 Identities = 30/56 (53%), Positives = 42/56 (75%)
 Frame = +3

Query: 222 EDPQNLMKEDGVDILTNLWIRSFKSPRAPVTDLNTFLERYELWVLAYQNIYADVAG 389
           +DP NLMKEDGV + + +WI +F+ P   VT+L +++ R+ELWVLAYQ +YAD  G
Sbjct: 57  DDPTNLMKEDGVSVCSQMWIENFREPDRIVTNLTSYIRRFELWVLAYQKVYADETG 112


>ref|XP_004231081.1| PREDICTED: uncharacterized mitochondrial protein ymf11-like
           [Solanum lycopersicum]
          Length = 673

 Score = 72.8 bits (177), Expect = 4e-11
 Identities = 31/64 (48%), Positives = 44/64 (68%)
 Frame = +3

Query: 207 QKNTKEDPQNLMKEDGVDILTNLWIRSFKSPRAPVTDLNTFLERYELWVLAYQNIYADVA 386
           Q   K+D  +L+K+D ++IL+NLWI+SF  P+ P T+L  FL + +LWVLAYQ  YA + 
Sbjct: 19  QPRRKDDTDSLVKDDPLEILSNLWIKSFSQPQKPFTNLTGFLSKLDLWVLAYQRTYAHLT 78

Query: 387 GELP 398
           G  P
Sbjct: 79  GSFP 82


>ref|XP_004300288.1| PREDICTED: uncharacterized mitochondrial protein ymf11-like
           [Fragaria vesca subsp. vesca]
          Length = 732

 Score = 72.4 bits (176), Expect = 6e-11
 Identities = 31/56 (55%), Positives = 42/56 (75%)
 Frame = +3

Query: 222 EDPQNLMKEDGVDILTNLWIRSFKSPRAPVTDLNTFLERYELWVLAYQNIYADVAG 389
           EDP NL+KEDGV IL+ +WI +F+ P   VT+L +++ R+ELWVLAYQ + AD  G
Sbjct: 59  EDPSNLIKEDGVSILSQMWIENFREPDRIVTNLTSYIRRFELWVLAYQKVCADDMG 114


>ref|XP_002329588.1| predicted protein [Populus trichocarpa]
          Length = 675

 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 30/56 (53%), Positives = 41/56 (73%)
 Frame = +3

Query: 222 EDPQNLMKEDGVDILTNLWIRSFKSPRAPVTDLNTFLERYELWVLAYQNIYADVAG 389
           +DP NLMKEDGV + + +WI +F+ P   V++L T+L R+ELWVLAYQ + AD  G
Sbjct: 3   DDPSNLMKEDGVSVCSQMWIENFREPDRIVSNLTTYLRRFELWVLAYQKVCADDMG 58


>gb|EMJ10121.1| hypothetical protein PRUPE_ppb001514mg [Prunus persica]
          Length = 739

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 33/71 (46%), Positives = 47/71 (66%), Gaps = 1/71 (1%)
 Frame = +3

Query: 180 RFLFAVP-GKQKNTKEDPQNLMKEDGVDILTNLWIRSFKSPRAPVTDLNTFLERYELWVL 356
           RFL   P  ++    EDP NL+KEDGV +++ +WI +F+ P    T+L+++L R ELWVL
Sbjct: 50  RFLSYSPVSRRPPDPEDPSNLIKEDGVSVISQMWIENFREPDRIATNLSSYLRRLELWVL 109

Query: 357 AYQNIYADVAG 389
           AYQ + AD  G
Sbjct: 110 AYQKVCADEMG 120


>ref|XP_006364540.1| PREDICTED: uncharacterized mitochondrial protein ymf11-like
           [Solanum tuberosum]
          Length = 681

 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 29/60 (48%), Positives = 42/60 (70%)
 Frame = +3

Query: 219 KEDPQNLMKEDGVDILTNLWIRSFKSPRAPVTDLNTFLERYELWVLAYQNIYADVAGELP 398
           KE   +L+KED ++IL+NLWI++F  P+ P T+L  FL + +LW+LAYQ  YA + G  P
Sbjct: 29  KEGTHSLLKEDPLEILSNLWIKTFSQPQKPFTNLTGFLSKLDLWILAYQRTYAHLTGSFP 88


>gb|EOY24103.1| Intron maturase isoform 4 [Theobroma cacao]
          Length = 733

 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 29/56 (51%), Positives = 41/56 (73%)
 Frame = +3

Query: 222 EDPQNLMKEDGVDILTNLWIRSFKSPRAPVTDLNTFLERYELWVLAYQNIYADVAG 389
           +DP NLMKEDGV + + +WI +F+ P   +T+L ++L R+ELWVLAYQ + AD  G
Sbjct: 59  DDPANLMKEDGVSVCSQMWIENFREPDRIITNLASYLRRFELWVLAYQKVCADEIG 114


>gb|EOY24100.1| Intron maturase isoform 1 [Theobroma cacao]
           gi|508776845|gb|EOY24101.1| Intron maturase isoform 1
           [Theobroma cacao] gi|508776846|gb|EOY24102.1| Intron
           maturase isoform 1 [Theobroma cacao]
          Length = 733

 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 29/56 (51%), Positives = 41/56 (73%)
 Frame = +3

Query: 222 EDPQNLMKEDGVDILTNLWIRSFKSPRAPVTDLNTFLERYELWVLAYQNIYADVAG 389
           +DP NLMKEDGV + + +WI +F+ P   +T+L ++L R+ELWVLAYQ + AD  G
Sbjct: 59  DDPANLMKEDGVSVCSQMWIENFREPDRIITNLASYLRRFELWVLAYQKVCADEIG 114


>gb|EPS73440.1| hypothetical protein M569_01312, partial [Genlisea aurea]
          Length = 675

 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 29/62 (46%), Positives = 40/62 (64%)
 Frame = +3

Query: 204 KQKNTKEDPQNLMKEDGVDILTNLWIRSFKSPRAPVTDLNTFLERYELWVLAYQNIYADV 383
           +Q +   DP  LMKEDGV + + +WI +F+ P   V +L  +L R+ELWVLAYQ + AD 
Sbjct: 9   RQAHDPNDPATLMKEDGVSVCSQMWIENFRDPNRTVNNLTNYLRRFELWVLAYQKVSADE 68

Query: 384 AG 389
            G
Sbjct: 69  TG 70


>ref|XP_004163762.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized mitochondrial
           protein ymf11-like [Cucumis sativus]
          Length = 722

 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 30/69 (43%), Positives = 44/69 (63%)
 Frame = +3

Query: 183 FLFAVPGKQKNTKEDPQNLMKEDGVDILTNLWIRSFKSPRAPVTDLNTFLERYELWVLAY 362
           F F    ++     DP NLMKEDG+   + +WI +F+ P   V++L T+L+++ELWVLAY
Sbjct: 46  FSFVPAHRRAPDPNDPSNLMKEDGISACSQMWIENFREPDRIVSNLTTYLQKFELWVLAY 105

Query: 363 QNIYADVAG 389
           Q + AD  G
Sbjct: 106 QKVCADEMG 114


>ref|XP_004148504.1| PREDICTED: uncharacterized mitochondrial protein ymf11-like
           [Cucumis sativus]
          Length = 722

 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 30/69 (43%), Positives = 44/69 (63%)
 Frame = +3

Query: 183 FLFAVPGKQKNTKEDPQNLMKEDGVDILTNLWIRSFKSPRAPVTDLNTFLERYELWVLAY 362
           F F    ++     DP NLMKEDG+   + +WI +F+ P   V++L T+L+++ELWVLAY
Sbjct: 46  FSFVPAHRRAPDPNDPSNLMKEDGISACSQMWIENFREPDRIVSNLTTYLQKFELWVLAY 105

Query: 363 QNIYADVAG 389
           Q + AD  G
Sbjct: 106 QKVCADEMG 114


>gb|EXB57734.1| putative mitochondrial protein ymf11 [Morus notabilis]
          Length = 722

 Score = 69.3 bits (168), Expect = 5e-10
 Identities = 43/110 (39%), Positives = 66/110 (60%), Gaps = 3/110 (2%)
 Frame = +3

Query: 69  HCRSVKKLCTL-KRFLPSSKTVLGLEHHNQETIFHFPVRFL-FAVPGKQKNTKED-PQNL 239
           H + +++L  L +R LP+S     L +  Q  I H  +R L FA   +++    D P  L
Sbjct: 5   HSQMLRRLPILSRRILPNSIFPSPLPNP-QNRISHGFLRLLSFAQAAQRRPPDPDHPSTL 63

Query: 240 MKEDGVDILTNLWIRSFKSPRAPVTDLNTFLERYELWVLAYQNIYADVAG 389
           MKEDGV + + +WI +F+ P   V++L+++L R+ELWVLAYQ + AD  G
Sbjct: 64  MKEDGVSVCSRMWIENFREPDRIVSNLSSYLRRFELWVLAYQKVCADNTG 113


>ref|NP_174294.1| protein NUCLEAR MATURASE 1 [Arabidopsis thaliana]
           gi|12324175|gb|AAG52062.1|AC022455_16 unknown protein;
           35070-37205 [Arabidopsis thaliana]
           gi|332193046|gb|AEE31167.1| protein NUCLEAR MATURASE 1
           [Arabidopsis thaliana]
          Length = 711

 Score = 69.3 bits (168), Expect = 5e-10
 Identities = 37/106 (34%), Positives = 58/106 (54%), Gaps = 6/106 (5%)
 Frame = +3

Query: 99  LKRFLPSSKTVLGLEHHNQETIFHFPVRFLFAVP-----GKQKNTKEDPQNLMKEDGVDI 263
           +KR      ++  +  H     FH P+  L   P      ++ ++ +DP +L+K+D VDI
Sbjct: 1   MKRLTYPLSSLRNIVEHFHCNTFHKPISSLSISPTLKSESREPSSTQDPYSLLKQDPVDI 60

Query: 264 LTNLWIRSFKS-PRAPVTDLNTFLERYELWVLAYQNIYADVAGELP 398
             +LW++SF S P A  ++L  FL +++LWVLAYQ   A V G  P
Sbjct: 61  CLSLWVKSFSSPPSATFSNLTGFLSKFDLWVLAYQRTCAHVTGTFP 106


>ref|XP_002528785.1| RNA binding protein, putative [Ricinus communis]
           gi|223531788|gb|EEF33607.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 732

 Score = 68.9 bits (167), Expect = 6e-10
 Identities = 32/71 (45%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
 Frame = +3

Query: 180 RFLFAVPGKQKNTK-EDPQNLMKEDGVDILTNLWIRSFKSPRAPVTDLNTFLERYELWVL 356
           R L   P  ++N   +DP  LMKEDGV + + +WI +F+ P   V +L ++L R+ELWVL
Sbjct: 45  RLLSFTPMHRRNPDPDDPATLMKEDGVSVCSQMWIENFREPDRTVNNLTSYLRRFELWVL 104

Query: 357 AYQNIYADVAG 389
           AYQ + AD  G
Sbjct: 105 AYQKVSADEMG 115


>ref|NP_199503.1| Intron maturase, type II family protein [Arabidopsis thaliana]
           gi|9759434|dbj|BAB10231.1| unnamed protein product
           [Arabidopsis thaliana] gi|332008065|gb|AED95448.1|
           Intron maturase, type II family protein [Arabidopsis
           thaliana]
          Length = 735

 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 28/62 (45%), Positives = 41/62 (66%)
 Frame = +3

Query: 204 KQKNTKEDPQNLMKEDGVDILTNLWIRSFKSPRAPVTDLNTFLERYELWVLAYQNIYADV 383
           +Q    +DP NL+KEDGV + + +W+ +FK P    T+L ++L R+ELWVLAYQ +  D 
Sbjct: 58  QQAPDPDDPANLLKEDGVSLCSQMWLENFKEPDKTATNLTSYLRRFELWVLAYQKVCCDE 117

Query: 384 AG 389
            G
Sbjct: 118 LG 119


>ref|XP_006837140.1| hypothetical protein AMTR_s00110p00142760 [Amborella trichopoda]
           gi|548839733|gb|ERM99993.1| hypothetical protein
           AMTR_s00110p00142760 [Amborella trichopoda]
          Length = 706

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 28/71 (39%), Positives = 46/71 (64%)
 Frame = +3

Query: 186 LFAVPGKQKNTKEDPQNLMKEDGVDILTNLWIRSFKSPRAPVTDLNTFLERYELWVLAYQ 365
           LF    K+++  EDP +LMK D +++ + LW+ SF +P   +++L  FL +++LW+LAYQ
Sbjct: 25  LFIENTKKEDQHEDPFSLMKADPIELCSQLWVSSFSNPNKTLSNLTGFLRKFDLWILAYQ 84

Query: 366 NIYADVAGELP 398
             +AD  G  P
Sbjct: 85  RAHADEVGSFP 95


>ref|XP_002326494.1| predicted protein [Populus trichocarpa]
          Length = 619

 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 28/55 (50%), Positives = 39/55 (70%)
 Frame = +3

Query: 225 DPQNLMKEDGVDILTNLWIRSFKSPRAPVTDLNTFLERYELWVLAYQNIYADVAG 389
           DP NLMKEDGV + + +WI +F+ P   +++L  +L R+ELWVLAYQ + AD  G
Sbjct: 1   DPSNLMKEDGVSVCSQMWIENFREPDRILSNLTAYLRRFELWVLAYQKVCADDMG 55