BLASTX nr result

ID: Ephedra28_contig00029703 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00029703
         (487 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001057661.2| Os06g0484800 [Oryza sativa Japonica Group] g...    72   6e-11
gb|AAD08951.1| putative reverse transcriptase [Arabidopsis thali...    72   6e-11
gb|EOY08785.1| BZIP-like protein [Theobroma cacao]                     72   8e-11
emb|CAA12932.1| reverse transcriptase [Pinus elliottii]                71   2e-10
gb|AAD32866.1|AC005489_4 F14N23.4 [Arabidopsis thaliana]               70   4e-10
dbj|BAF00918.1| putative reverse transcriptase [Arabidopsis thal...    70   4e-10
gb|EOY25449.1| Uncharacterized protein TCM_016755 [Theobroma cacao]    69   5e-10
emb|CAD40735.2| OSJNBa0072D21.13 [Oryza sativa Japonica Group]         69   5e-10
gb|EEE60876.1| hypothetical protein OsJ_14536 [Oryza sativa Japo...    69   5e-10
gb|EAY93853.1| hypothetical protein OsI_15629 [Oryza sativa Indi...    69   5e-10
gb|AAF79812.1|AC020646_35 T32E20.6 [Arabidopsis thaliana]              68   1e-09
gb|AAC95175.1| putative non-LTR retroelement reverse transcripta...    68   1e-09
gb|EOY17514.1| Uncharacterized protein TCM_042330 [Theobroma cacao]    68   1e-09
gb|EOY02239.1| Uncharacterized protein TCM_016763 [Theobroma cacao]    68   1e-09
gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]                67   2e-09
gb|EOY02238.1| Uncharacterized protein TCM_016762 [Theobroma cacao]    67   2e-09
ref|XP_002457223.1| hypothetical protein SORBIDRAFT_03g003583 [S...    67   3e-09
ref|XP_002436460.1| hypothetical protein SORBIDRAFT_10g003020 [S...    67   3e-09
gb|EOY25454.1| Uncharacterized protein TCM_026877 [Theobroma cacao]    66   4e-09
gb|EOX99837.1| Uncharacterized protein TCM_008802 [Theobroma cacao]    66   4e-09

>ref|NP_001057661.2| Os06g0484800 [Oryza sativa Japonica Group]
           gi|125597263|gb|EAZ37043.1| hypothetical protein
           OsJ_21387 [Oryza sativa Japonica Group]
           gi|255677053|dbj|BAF19575.2| Os06g0484800 [Oryza sativa
           Japonica Group]
          Length = 935

 Score = 72.4 bits (176), Expect = 6e-11
 Identities = 41/106 (38%), Positives = 58/106 (54%)
 Frame = +1

Query: 118 GMVKNKSLVLDSWSIDFFQDSWGFVKKDLLIAMYDSLRYQSLPKE*KSITISLLPKKNIV 297
           GM KN S   D  +  F++ +W ++K DL+  + D  +  ++P E     I L+PKKN  
Sbjct: 260 GMRKNASPGPDGLNAAFYRSAWSWIKDDLMTLVQDFYQTGNIPPELNKTNIVLIPKKNRS 319

Query: 298 DSPADCRPIGLCNSLYEILSKLIEEHVKLFLLGLIFPNQIGFVLGR 435
            SP D RPI LCN  Y+IL+K I   +K  L   I  +Q  F+ GR
Sbjct: 320 ISPKDFRPISLCNVPYKILAKSIANRIKGKLPDFICDSQHAFIPGR 365


>gb|AAD08951.1| putative reverse transcriptase [Arabidopsis thaliana]
            gi|20197043|gb|AAM14892.1| putative reverse transcriptase
            [Arabidopsis thaliana]
          Length = 1412

 Score = 72.4 bits (176), Expect = 6e-11
 Identities = 35/102 (34%), Positives = 57/102 (55%)
 Frame = +1

Query: 130  NKSLVLDSWSIDFFQDSWGFVKKDLLIAMYDSLRYQSLPKE*KSITISLLPKKNIVDSPA 309
            NKS   D ++++FF+++W  + +++ +A+     Y  LPK   S  ++L+PK+       
Sbjct: 734  NKSPGPDGYTVEFFRETWSVIGQEVTMAIKSFFTYGFLPKGLNSTILALIPKRTYAKEMK 793

Query: 310  DCRPIGLCNSLYEILSKLIEEHVKLFLLGLIFPNQIGFVLGR 435
            D RPI  CN LY+ +SKL+   +K  L   I PNQ  F+  R
Sbjct: 794  DYRPISCCNVLYKAISKLLANRLKCLLPEFIAPNQSAFISDR 835


>gb|EOY08785.1| BZIP-like protein [Theobroma cacao]
          Length = 539

 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 39/96 (40%), Positives = 57/96 (59%)
 Frame = +1

Query: 148 DSWSIDFFQDSWGFVKKDLLIAMYDSLRYQSLPKE*KSITISLLPKKNIVDSPADCRPIG 327
           D++S  F+Q  W  +  DLLIA+ DS    ++P+   S ++ LL KK+I +S +D RPI 
Sbjct: 288 DAFSSLFYQQCWHIIADDLLIAVRDSFTSSTMPRGVTSTSLVLLAKKSIAESWSDFRPIS 347

Query: 328 LCNSLYEILSKLIEEHVKLFLLGLIFPNQIGFVLGR 435
           LC    +I++KL+   +   L  LI  NQ GFV GR
Sbjct: 348 LCTVFNKIITKLLVNQLAKVLSSLISDNQSGFVSGR 383


>emb|CAA12932.1| reverse transcriptase [Pinus elliottii]
          Length = 194

 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 37/96 (38%), Positives = 57/96 (59%)
 Frame = +1

Query: 148 DSWSIDFFQDSWGFVKKDLLIAMYDSLRYQSLPKE*KSITISLLPKKNIVDSPADCRPIG 327
           D  +I+F++  W  VK D+   + DS R +++ K   S  I+L+PK     +P   RPI 
Sbjct: 5   DGITINFYKVCWEIVKNDIWEIVEDSRRSKTILKSLNSTFIALVPKVEEAHTPEKFRPIA 64

Query: 328 LCNSLYEILSKLIEEHVKLFLLGLIFPNQIGFVLGR 435
           LCN +Y+I+SK+I   +K+ L G+I   Q G+V GR
Sbjct: 65  LCNVIYKIISKVIANRLKIILPGIISQEQSGYVEGR 100


>gb|AAD32866.1|AC005489_4 F14N23.4 [Arabidopsis thaliana]
          Length = 1161

 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 31/105 (29%), Positives = 61/105 (58%)
 Frame = +1

Query: 121 MVKNKSLVLDSWSIDFFQDSWGFVKKDLLIAMYDSLRYQSLPKE*KSITISLLPKKNIVD 300
           M +NK+   D + ++FF ++W  VK  ++ A+ +     +LP+   +  I+L+PK    D
Sbjct: 502 MPRNKAPGPDGFPVEFFIEAWAIVKSSVVAAIREFFISGNLPRGFNATAITLIPKVTGAD 561

Query: 301 SPADCRPIGLCNSLYEILSKLIEEHVKLFLLGLIFPNQIGFVLGR 435
                RP+  C ++Y++++++I   +KLF+   +  NQ+GF+ GR
Sbjct: 562 RLTQFRPVACCTTIYKVITRIISRRLKLFIDQAVQANQVGFIKGR 606


>dbj|BAF00918.1| putative reverse transcriptase [Arabidopsis thaliana]
          Length = 910

 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 31/105 (29%), Positives = 61/105 (58%)
 Frame = +1

Query: 121 MVKNKSLVLDSWSIDFFQDSWGFVKKDLLIAMYDSLRYQSLPKE*KSITISLLPKKNIVD 300
           M +NK+   D + ++FF ++W  VK  ++ A+ +     +LP+   +  I+L+PK    D
Sbjct: 459 MPRNKAPGPDGFPVEFFIEAWAIVKSSVVAAIREFFISGNLPRGFNATAITLIPKVTGAD 518

Query: 301 SPADCRPIGLCNSLYEILSKLIEEHVKLFLLGLIFPNQIGFVLGR 435
                RP+  C ++Y++++++I   +KLF+   +  NQ+GF+ GR
Sbjct: 519 RLTQFRPVACCTTIYKVITRIISRRLKLFIDQAVQANQVGFIKGR 563


>gb|EOY25449.1| Uncharacterized protein TCM_016755 [Theobroma cacao]
          Length = 1245

 Score = 69.3 bits (168), Expect = 5e-10
 Identities = 39/96 (40%), Positives = 55/96 (57%)
 Frame = +1

Query: 148  DSWSIDFFQDSWGFVKKDLLIAMYDSLRYQSLPKE*KSITISLLPKKNIVDSPADCRPIG 327
            D +S  F+Q  W  +K+DLL A+ D  +   +P+   S T+ LLPKK      +D RPI 
Sbjct: 787  DGFSSLFYQHCWDIIKQDLLEAVLDFFKGTPMPRGVTSTTLVLLPKKPNSCQWSDFRPIS 846

Query: 328  LCNSLYEILSKLIEEHVKLFLLGLIFPNQIGFVLGR 435
            LC  L +I++KL+   +  FL  +I  NQ GFV GR
Sbjct: 847  LCTVLNKIVTKLLANRLSKFLPSIISENQSGFVNGR 882


>emb|CAD40735.2| OSJNBa0072D21.13 [Oryza sativa Japonica Group]
          Length = 412

 Score = 69.3 bits (168), Expect = 5e-10
 Identities = 36/91 (39%), Positives = 54/91 (59%)
 Frame = +1

Query: 121 MVKNKSLVLDSWSIDFFQDSWGFVKKDLLIAMYDSLRYQSLPKE*KSITISLLPKKNIVD 300
           M  N S   D  ++ FF+ +WG++K D++  + D     +LPKE     I L+PKKN   
Sbjct: 1   MKSNASPEPDGMNVAFFKAAWGWIKDDVMKLVEDFYNTGNLPKELNKTNIVLIPKKNRPA 60

Query: 301 SPADCRPIGLCNSLYEILSKLIEEHVKLFLL 393
           +PAD + I LCN +Y+I++K I   +K FLL
Sbjct: 61  NPADFKSISLCNVMYKIIAKSIANIIKGFLL 91


>gb|EEE60876.1| hypothetical protein OsJ_14536 [Oryza sativa Japonica Group]
          Length = 457

 Score = 69.3 bits (168), Expect = 5e-10
 Identities = 36/91 (39%), Positives = 54/91 (59%)
 Frame = +1

Query: 121 MVKNKSLVLDSWSIDFFQDSWGFVKKDLLIAMYDSLRYQSLPKE*KSITISLLPKKNIVD 300
           M  N S   D  ++ FF+ +WG++K D++  + D     +LPKE     I L+PKKN   
Sbjct: 1   MKSNASPEPDGMNVAFFKAAWGWIKDDVMKLVEDFYNTGNLPKELNKTNIVLIPKKNRPA 60

Query: 301 SPADCRPIGLCNSLYEILSKLIEEHVKLFLL 393
           +PAD + I LCN +Y+I++K I   +K FLL
Sbjct: 61  NPADFKSISLCNVMYKIIAKSIANIIKGFLL 91


>gb|EAY93853.1| hypothetical protein OsI_15629 [Oryza sativa Indica Group]
          Length = 526

 Score = 69.3 bits (168), Expect = 5e-10
 Identities = 36/91 (39%), Positives = 54/91 (59%)
 Frame = +1

Query: 121 MVKNKSLVLDSWSIDFFQDSWGFVKKDLLIAMYDSLRYQSLPKE*KSITISLLPKKNIVD 300
           M  N S   D  ++ FF+ +WG++K D++  + D     +LPKE     I L+PKKN   
Sbjct: 1   MKSNASPEPDGMNVAFFKAAWGWIKDDVMKLVEDFYNTGNLPKELNKTNIVLIPKKNRPA 60

Query: 301 SPADCRPIGLCNSLYEILSKLIEEHVKLFLL 393
           +PAD + I LCN +Y+I++K I   +K FLL
Sbjct: 61  NPADFKSISLCNVMYKIIAKSIANIIKGFLL 91


>gb|AAF79812.1|AC020646_35 T32E20.6 [Arabidopsis thaliana]
          Length = 458

 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 34/105 (32%), Positives = 59/105 (56%)
 Frame = +1

Query: 121 MVKNKSLVLDSWSIDFFQDSWGFVKKDLLIAMYDSLRYQSLPKE*KSITISLLPKKNIVD 300
           M K+KSL  DS++++F++ +W  + K+ ++A+        LPK   S  ++L+PKK   +
Sbjct: 206 MPKDKSLGPDSYTMEFYKSTWDIIGKEFILAIKSFFVKGFLPKAINSTILALIPKKATTN 265

Query: 301 SPADCRPIGLCNSLYEILSKLIEEHVKLFLLGLIFPNQIGFVLGR 435
              D RPI  CN +++++ K+I   +K  L   +  NQ  FV  R
Sbjct: 266 EMKDYRPISCCNVIFKVILKIIANPLKRVLPNFVVGNQSAFVQDR 310


>gb|AAC95175.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1352

 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 37/102 (36%), Positives = 58/102 (56%)
 Frame = +1

Query: 130 NKSLVLDSWSIDFFQDSWGFVKKDLLIAMYDSLRYQSLPKE*KSITISLLPKKNIVDSPA 309
           +KS   D ++++FF+ +W  + +DL+IA+        LPK   +  ++L+ KK+ V    
Sbjct: 615 HKSPGPDGYTVEFFKTAWPVLGRDLVIAIQSFFLKGFLPKGINTTILALISKKHEVSGMK 674

Query: 310 DCRPIGLCNSLYEILSKLIEEHVKLFLLGLIFPNQIGFVLGR 435
           D RPI  CN LY+I+SKL+   +K  L   I PNQ  F+  R
Sbjct: 675 DYRPISCCNVLYKIVSKLMANRLKEILPASIAPNQSAFIKDR 716


>gb|EOY17514.1| Uncharacterized protein TCM_042330 [Theobroma cacao]
          Length = 2249

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 36/96 (37%), Positives = 54/96 (56%)
 Frame = +1

Query: 148  DSWSIDFFQDSWGFVKKDLLIAMYDSLRYQSLPKE*KSITISLLPKKNIVDSPADCRPIG 327
            D +S  F+Q  W  + +DLL A+ D     ++P+   S T+ LLPKK+     +D RPI 
Sbjct: 1333 DGFSSYFYQQCWNIIAQDLLDAVRDFFHGANIPRGVTSTTLILLPKKSSASKWSDFRPIS 1392

Query: 328  LCNSLYEILSKLIEEHVKLFLLGLIFPNQIGFVLGR 435
            LC  + +I++KL+   +   L  +I  NQ GFV GR
Sbjct: 1393 LCTVMNKIITKLLSNRLAKVLPSIITENQSGFVGGR 1428


>gb|EOY02239.1| Uncharacterized protein TCM_016763 [Theobroma cacao]
          Length = 2127

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 39/96 (40%), Positives = 53/96 (55%)
 Frame = +1

Query: 148  DSWSIDFFQDSWGFVKKDLLIAMYDSLRYQSLPKE*KSITISLLPKKNIVDSPADCRPIG 327
            D +S  F+Q  W  +K DLL A+ D  R   LP+   S T+ LLPKK      ++ RPI 
Sbjct: 1212 DGFSSLFYQHCWDIIKNDLLDAVLDFFRGSPLPRGVTSTTLVLLPKKPNACHWSEYRPIS 1271

Query: 328  LCNSLYEILSKLIEEHVKLFLLGLIFPNQIGFVLGR 435
            LC  L +I++KL+   +   L  +I  NQ GFV GR
Sbjct: 1272 LCTVLNKIVTKLLANRLSKILPSIISENQSGFVNGR 1307


>gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]
          Length = 872

 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 36/105 (34%), Positives = 57/105 (54%)
 Frame = +1

Query: 121 MVKNKSLVLDSWSIDFFQDSWGFVKKDLLIAMYDSLRYQSLPKE*KSITISLLPKKNIVD 300
           M K+KS   D ++ +F++ +W  + ++  + +    +   LPK   SI ++L+PKK    
Sbjct: 112 MPKDKSPGPDGYTSEFYKATWDIIGQEFTLPVQSFFQKGFLPKGINSIILALIPKKLAAK 171

Query: 301 SPADCRPIGLCNSLYEILSKLIEEHVKLFLLGLIFPNQIGFVLGR 435
              D RPI  CN LY+++SK+I   +KL L   I  NQ  FV  R
Sbjct: 172 EMRDYRPISCCNVLYKVISKIIANRLKLLLPRFIAENQSAFVKDR 216


>gb|EOY02238.1| Uncharacterized protein TCM_016762 [Theobroma cacao]
          Length = 2214

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 37/96 (38%), Positives = 53/96 (55%)
 Frame = +1

Query: 148  DSWSIDFFQDSWGFVKKDLLIAMYDSLRYQSLPKE*KSITISLLPKKNIVDSPADCRPIG 327
            D +S  F+Q  W  +K+DL  A+ D  +   LP+   S T+ LLPK   V   ++ RPI 
Sbjct: 1299 DGFSSLFYQHCWDIIKQDLFEAVLDFFKGSPLPRGITSTTLVLLPKTQNVSQWSEFRPIS 1358

Query: 328  LCNSLYEILSKLIEEHVKLFLLGLIFPNQIGFVLGR 435
            LC  L +I++KL+   +   L  +I  NQ GFV GR
Sbjct: 1359 LCTVLNKIVTKLLANRLSKILPSIISENQSGFVNGR 1394


>ref|XP_002457223.1| hypothetical protein SORBIDRAFT_03g003583 [Sorghum bicolor]
           gi|241929198|gb|EES02343.1| hypothetical protein
           SORBIDRAFT_03g003583 [Sorghum bicolor]
          Length = 564

 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 33/97 (34%), Positives = 54/97 (55%)
 Frame = +1

Query: 148 DSWSIDFFQDSWGFVKKDLLIAMYDSLRYQSLPKE*KSITISLLPKKNIVDSPADCRPIG 327
           D  S  F++ SW +  KD+L  +    +  +LP +     I+L+PK N   +P D RPI 
Sbjct: 95  DGLSAGFYKSSWEWTGKDVLDLVTAFYQTGNLPSDINKTHITLIPKVNTPVTPKDYRPIS 154

Query: 328 LCNSLYEILSKLIEEHVKLFLLGLIFPNQIGFVLGRN 438
           LCN  Y++++K + + +K  L  +I P Q  F+ GR+
Sbjct: 155 LCNVSYKVIAKSLADRIKCHLPHIIHPTQAAFIQGRH 191


>ref|XP_002436460.1| hypothetical protein SORBIDRAFT_10g003020 [Sorghum bicolor]
           gi|241914683|gb|EER87827.1| hypothetical protein
           SORBIDRAFT_10g003020 [Sorghum bicolor]
          Length = 862

 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 33/97 (34%), Positives = 55/97 (56%)
 Frame = +1

Query: 148 DSWSIDFFQDSWGFVKKDLLIAMYDSLRYQSLPKE*KSITISLLPKKNIVDSPADCRPIG 327
           D  + +F++ SW +  KD++  + D      L  E     I+++PK N   +P D RPI 
Sbjct: 233 DGLNAEFYKSSWDWTGKDVIKLVSDFYNNAHLQPELNMTHIAMIPKINNPMTPKDYRPIS 292

Query: 328 LCNSLYEILSKLIEEHVKLFLLGLIFPNQIGFVLGRN 438
           LCN +Y+I++K + E +K  L  +I P+Q  F+ GR+
Sbjct: 293 LCNVVYKIIAKSLAERIKSHLPHIIHPSQTAFIKGRH 329


>gb|EOY25454.1| Uncharacterized protein TCM_026877 [Theobroma cacao]
          Length = 2367

 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 36/96 (37%), Positives = 52/96 (54%)
 Frame = +1

Query: 148  DSWSIDFFQDSWGFVKKDLLIAMYDSLRYQSLPKE*KSITISLLPKKNIVDSPADCRPIG 327
            D +S  F+Q  W  +  DLL A+ D     ++P+   S T+ LLPKK      +D RPI 
Sbjct: 1505 DGFSSYFYQQCWNIIAHDLLDAVRDFFHGANIPRGVTSTTLILLPKKPSASKWSDFRPIS 1564

Query: 328  LCNSLYEILSKLIEEHVKLFLLGLIFPNQIGFVLGR 435
            LC  + +I++KL+   +   L  +I  NQ GFV GR
Sbjct: 1565 LCTVMNKIITKLLSNRLAKILPSIITENQSGFVGGR 1600


>gb|EOX99837.1| Uncharacterized protein TCM_008802 [Theobroma cacao]
          Length = 372

 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 36/96 (37%), Positives = 51/96 (53%)
 Frame = +1

Query: 166 FFQDSWGFVKKDLLIAMYDSLRYQSLPKE*KSITISLLPKKNIVDSPADCRPIGLCNSLY 345
           F+Q  W  V  D L A+ D      LP+   S TI LLPK N     +D +PI LCN L 
Sbjct: 267 FYQQCWDIVANDFLDAVVDFFHGIDLPRGITSTTIMLLPKNNNAPKWSDFKPISLCNVLN 326

Query: 346 EILSKLIEEHVKLFLLGLIFPNQIGFVLGRNHRQDY 453
           +I++K++   +   L  +I  NQ GFV G+  ++ Y
Sbjct: 327 KIITKILANRLANVLPSMITDNQSGFVGGKTDQRQY 362


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