BLASTX nr result
ID: Ephedra28_contig00029676
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra28_contig00029676
(440 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006296899.1| hypothetical protein CARUB_v10012891mg [Caps... 62 8e-08
ref|XP_006418595.1| hypothetical protein EUTSA_v10002385mg [Eutr... 62 1e-07
ref|NP_850988.1| RNAse E/G-like protein [Arabidopsis thaliana] g... 62 1e-07
ref|NP_850987.1| RNAse E/G-like protein [Arabidopsis thaliana] g... 62 1e-07
emb|CAD48421.1| putative endoribonuclease E [Arabidopsis thaliana] 62 1e-07
ref|NP_001189510.1| RNAse E/G-like protein [Arabidopsis thaliana... 62 1e-07
ref|XP_002883633.1| glycoside hydrolase starch-binding domain-co... 62 1e-07
ref|NP_178508.2| RNAse E/G-like protein [Arabidopsis thaliana] g... 62 1e-07
ref|XP_004155141.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri... 57 3e-06
ref|XP_004152808.1| PREDICTED: uncharacterized protein LOC101204... 57 3e-06
ref|XP_002321206.2| glycoside hydrolase starch-binding domain-co... 55 7e-06
>ref|XP_006296899.1| hypothetical protein CARUB_v10012891mg [Capsella rubella]
gi|482565608|gb|EOA29797.1| hypothetical protein
CARUB_v10012891mg [Capsella rubella]
Length = 994
Score = 62.0 bits (149), Expect = 8e-08
Identities = 37/104 (35%), Positives = 51/104 (49%)
Frame = +2
Query: 5 ICHVLAKLAENSSANNVKNKPRVLLQVDHKMHSFLANDNNKRMRQLSEALNVLIVLKERV 184
IC LAK+ + N K+ PR +L+VD M SFL R+ LS +L V I+LK
Sbjct: 874 ICRQLAKMDKRGDLENPKSWPRFILRVDSHMSSFLTTGKRTRLAVLSSSLKVWILLKVAR 933
Query: 185 TFTRGQFEVTMSDEKNSFNYNTHNVVDNKIAKGQKKRHMKAKAK 316
FTRG FEV ++ + N H V + + K +K K
Sbjct: 934 HFTRGTFEVKPYMDEKTVNERQHQVAISLLRKADAITDSSSKKK 977
>ref|XP_006418595.1| hypothetical protein EUTSA_v10002385mg [Eutrema salsugineum]
gi|557096523|gb|ESQ37031.1| hypothetical protein
EUTSA_v10002385mg [Eutrema salsugineum]
Length = 1009
Score = 61.6 bits (148), Expect = 1e-07
Identities = 37/104 (35%), Positives = 50/104 (48%)
Frame = +2
Query: 5 ICHVLAKLAENSSANNVKNKPRVLLQVDHKMHSFLANDNNKRMRQLSEALNVLIVLKERV 184
IC LAK+ + N K+ PR +L+VD M SFL R+ LS +L V I+LK
Sbjct: 889 ICRQLAKMEKRGDLENPKSWPRFILRVDSHMSSFLTTGKRTRLAILSSSLKVWILLKVAR 948
Query: 185 TFTRGQFEVTMSDEKNSFNYNTHNVVDNKIAKGQKKRHMKAKAK 316
FTRG FEV ++ + N H V + + K K K
Sbjct: 949 HFTRGTFEVKPFMDEKTVNERQHQVAISLLKKADAIADSSGKKK 992
>ref|NP_850988.1| RNAse E/G-like protein [Arabidopsis thaliana]
gi|330250722|gb|AEC05816.1| RNAse E/G-like protein
[Arabidopsis thaliana]
Length = 871
Score = 61.6 bits (148), Expect = 1e-07
Identities = 37/104 (35%), Positives = 50/104 (48%)
Frame = +2
Query: 5 ICHVLAKLAENSSANNVKNKPRVLLQVDHKMHSFLANDNNKRMRQLSEALNVLIVLKERV 184
IC LAK+ + N K+ PR +L+VD M SFL R+ LS +L V I+LK
Sbjct: 751 ICRQLAKMEKRGDLENPKSWPRFILRVDSHMSSFLTTGKRTRLAILSSSLKVWILLKVAR 810
Query: 185 TFTRGQFEVTMSDEKNSFNYNTHNVVDNKIAKGQKKRHMKAKAK 316
FTRG FEV ++ + N H V + + K K K
Sbjct: 811 HFTRGTFEVKPFMDEKTVNERQHQVAISLLKKADAIADSSGKKK 854
>ref|NP_850987.1| RNAse E/G-like protein [Arabidopsis thaliana]
gi|25991183|gb|AAN76770.1|AF450479_1 endoribonuclease
[Arabidopsis thaliana] gi|330250719|gb|AEC05813.1| RNAse
E/G-like protein [Arabidopsis thaliana]
Length = 996
Score = 61.6 bits (148), Expect = 1e-07
Identities = 37/104 (35%), Positives = 50/104 (48%)
Frame = +2
Query: 5 ICHVLAKLAENSSANNVKNKPRVLLQVDHKMHSFLANDNNKRMRQLSEALNVLIVLKERV 184
IC LAK+ + N K+ PR +L+VD M SFL R+ LS +L V I+LK
Sbjct: 876 ICRQLAKMEKRGDLENPKSWPRFILRVDSHMSSFLTTGKRTRLAILSSSLKVWILLKVAR 935
Query: 185 TFTRGQFEVTMSDEKNSFNYNTHNVVDNKIAKGQKKRHMKAKAK 316
FTRG FEV ++ + N H V + + K K K
Sbjct: 936 HFTRGTFEVKPFMDEKTVNERQHQVAISLLKKADAIADSSGKKK 979
>emb|CAD48421.1| putative endoribonuclease E [Arabidopsis thaliana]
Length = 818
Score = 61.6 bits (148), Expect = 1e-07
Identities = 37/104 (35%), Positives = 50/104 (48%)
Frame = +2
Query: 5 ICHVLAKLAENSSANNVKNKPRVLLQVDHKMHSFLANDNNKRMRQLSEALNVLIVLKERV 184
IC LAK+ + N K+ PR +L+VD M SFL R+ LS +L V I+LK
Sbjct: 698 ICRQLAKMEKRGDLENPKSWPRFILRVDSHMSSFLTTGKRTRLAILSSSLKVWILLKVAR 757
Query: 185 TFTRGQFEVTMSDEKNSFNYNTHNVVDNKIAKGQKKRHMKAKAK 316
FTRG FEV ++ + N H V + + K K K
Sbjct: 758 HFTRGTFEVKPFMDEKTVNERQHQVAISLLKKADAIADSSGKKK 801
>ref|NP_001189510.1| RNAse E/G-like protein [Arabidopsis thaliana]
gi|460425419|sp|F4IV66.1|RNE_ARATH RecName:
Full=Ribonuclease E/G-like protein, chloroplastic;
Short=RNase E/G-like protein; AltName: Full=RNase E;
Flags: Precursor gi|330250723|gb|AEC05817.1| RNAse
E/G-like protein [Arabidopsis thaliana]
Length = 1001
Score = 61.6 bits (148), Expect = 1e-07
Identities = 37/104 (35%), Positives = 50/104 (48%)
Frame = +2
Query: 5 ICHVLAKLAENSSANNVKNKPRVLLQVDHKMHSFLANDNNKRMRQLSEALNVLIVLKERV 184
IC LAK+ + N K+ PR +L+VD M SFL R+ LS +L V I+LK
Sbjct: 881 ICRQLAKMEKRGDLENPKSWPRFILRVDSHMSSFLTTGKRTRLAILSSSLKVWILLKVAR 940
Query: 185 TFTRGQFEVTMSDEKNSFNYNTHNVVDNKIAKGQKKRHMKAKAK 316
FTRG FEV ++ + N H V + + K K K
Sbjct: 941 HFTRGTFEVKPFMDEKTVNERQHQVAISLLKKADAIADSSGKKK 984
>ref|XP_002883633.1| glycoside hydrolase starch-binding domain-containing protein
[Arabidopsis lyrata subsp. lyrata]
gi|297329473|gb|EFH59892.1| glycoside hydrolase
starch-binding domain-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 991
Score = 61.6 bits (148), Expect = 1e-07
Identities = 37/104 (35%), Positives = 50/104 (48%)
Frame = +2
Query: 5 ICHVLAKLAENSSANNVKNKPRVLLQVDHKMHSFLANDNNKRMRQLSEALNVLIVLKERV 184
IC LAK+ + N K+ PR +L+VD M SFL R+ LS +L V I+LK
Sbjct: 872 ICRQLAKMEKRGDLENPKSWPRFILRVDSHMSSFLTTGKRTRLAILSSSLKVWILLKVAR 931
Query: 185 TFTRGQFEVTMSDEKNSFNYNTHNVVDNKIAKGQKKRHMKAKAK 316
FTRG FEV ++ + N H V + + K K K
Sbjct: 932 HFTRGTFEVKPFMDEKTVNERQHQVAISLLKKADAIADSSGKKK 975
>ref|NP_178508.2| RNAse E/G-like protein [Arabidopsis thaliana]
gi|20260628|gb|AAM13212.1| putative ribonuclease E
[Arabidopsis thaliana] gi|31711752|gb|AAP68232.1|
At2g04270 [Arabidopsis thaliana]
gi|330250720|gb|AEC05814.1| RNAse E/G-like protein
[Arabidopsis thaliana]
Length = 713
Score = 61.6 bits (148), Expect = 1e-07
Identities = 37/104 (35%), Positives = 50/104 (48%)
Frame = +2
Query: 5 ICHVLAKLAENSSANNVKNKPRVLLQVDHKMHSFLANDNNKRMRQLSEALNVLIVLKERV 184
IC LAK+ + N K+ PR +L+VD M SFL R+ LS +L V I+LK
Sbjct: 593 ICRQLAKMEKRGDLENPKSWPRFILRVDSHMSSFLTTGKRTRLAILSSSLKVWILLKVAR 652
Query: 185 TFTRGQFEVTMSDEKNSFNYNTHNVVDNKIAKGQKKRHMKAKAK 316
FTRG FEV ++ + N H V + + K K K
Sbjct: 653 HFTRGTFEVKPFMDEKTVNERQHQVAISLLKKADAIADSSGKKK 696
>ref|XP_004155141.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC101228180,
partial [Cucumis sativus]
Length = 926
Score = 57.0 bits (136), Expect = 3e-06
Identities = 33/82 (40%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
Frame = +2
Query: 5 ICHVLAKLAENSSANNVKNKPRVLLQVDHKMHSFLANDNNKRMRQLSEALNVLIVLKERV 184
IC LA L + +N K+ P+ +L+VDH M +L + R+ LS +L V I+LK
Sbjct: 811 ICRQLATLKQKPDPDNPKSWPKFVLRVDHHMCEYLTSGKRTRLAVLSSSLKVWIILKVAR 870
Query: 185 TFTRGQFEVT-MSDEKNSFNYN 247
FTRG FEV +D+K S + N
Sbjct: 871 GFTRGSFEVKYFADDKLSRSEN 892
>ref|XP_004152808.1| PREDICTED: uncharacterized protein LOC101204095 [Cucumis sativus]
Length = 992
Score = 57.0 bits (136), Expect = 3e-06
Identities = 33/82 (40%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
Frame = +2
Query: 5 ICHVLAKLAENSSANNVKNKPRVLLQVDHKMHSFLANDNNKRMRQLSEALNVLIVLKERV 184
IC LA L + +N K+ P+ +L+VDH M +L + R+ LS +L V I+LK
Sbjct: 877 ICRQLATLKQKPDPDNPKSWPKFVLRVDHHMCEYLTSGKRTRLAVLSSSLKVWIILKVAR 936
Query: 185 TFTRGQFEVT-MSDEKNSFNYN 247
FTRG FEV +D+K S + N
Sbjct: 937 GFTRGSFEVKYFADDKLSRSEN 958
>ref|XP_002321206.2| glycoside hydrolase starch-binding domain-containing family protein
[Populus trichocarpa] gi|550324362|gb|EEE99521.2|
glycoside hydrolase starch-binding domain-containing
family protein [Populus trichocarpa]
Length = 995
Score = 55.5 bits (132), Expect = 7e-06
Identities = 31/78 (39%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Frame = +2
Query: 5 ICHVLAKLAENSSANNVKNKPRVLLQVDHKMHSFLANDNNKRMRQLSEALNVLIVLKERV 184
IC LA + + + N K PR +L+VDH M ++L + R+ LS +L V I+LK
Sbjct: 880 ICRSLATMDQKADHENPKTWPRFILRVDHHMCNYLTSGKRTRLAVLSSSLKVWILLKVAR 939
Query: 185 TFTRGQFEV-TMSDEKNS 235
FTRG FEV +D+K +
Sbjct: 940 GFTRGAFEVKQFTDDKTN 957