BLASTX nr result

ID: Ephedra28_contig00029648 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00029648
         (530 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006850196.1| hypothetical protein AMTR_s00022p00248730 [A...    71   1e-10

>ref|XP_006850196.1| hypothetical protein AMTR_s00022p00248730 [Amborella trichopoda]
           gi|548853794|gb|ERN11777.1| hypothetical protein
           AMTR_s00022p00248730 [Amborella trichopoda]
          Length = 897

 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 48/175 (27%), Positives = 83/175 (47%), Gaps = 15/175 (8%)
 Frame = -3

Query: 489 QKSRIETLEKISTSFKQWFIRSNN----------LHQNLINNAKKISLILSKKPWNSETE 340
           Q   +  ++ +++SFK WF+              L   L ++ ++I  +LS+    SETE
Sbjct: 38  QALSLVNVKDVASSFKDWFLERRRRYPPSLTHETLTLTLNHDVQRICEVLSRGDCGSETE 97

Query: 339 NQLKNLNIKIDDTTTIYVLRCNFDTEMKIRFFEWYQQNSEQKPTIFVYRHFYKHLPRREL 160
             L +L++++ D   + VL+   D    ++FF+W  + +  + T   +   +K L R +L
Sbjct: 98  AALSDLHVRLTDECVVRVLKLQKDVLPSLKFFDWAGRQAGYRHTGAAFHAIFKMLSRAKL 157

Query: 159 KR----WLNDFLCNNGESDIKNLYPLVIGYVVAGKDDVAVKILNKIWSSG-TLDG 10
                 WL  F         +    LVIGY VAGK ++A++I  K+   G  LDG
Sbjct: 158 MTVMLDWLETFTKQRSVYTFRLHDTLVIGYAVAGKPEIALQIFGKMRFQGLDLDG 212


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