BLASTX nr result

ID: Ephedra28_contig00029629 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00029629
         (472 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006369631.1| hypothetical protein POPTR_0001s27420g [Popu...    62   6e-08
ref|XP_002299943.2| hypothetical protein POPTR_0001s27420g [Popu...    62   6e-08
gb|ABK92537.1| unknown [Populus trichocarpa]                           62   6e-08
ref|XP_002313304.2| hypothetical protein POPTR_0009s06610g [Popu...    59   5e-07

>ref|XP_006369631.1| hypothetical protein POPTR_0001s27420g [Populus trichocarpa]
           gi|550348312|gb|ERP66200.1| hypothetical protein
           POPTR_0001s27420g [Populus trichocarpa]
          Length = 342

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 33/98 (33%), Positives = 55/98 (56%), Gaps = 1/98 (1%)
 Frame = -1

Query: 469 KMYVDSERRADWGVNIETRRKAVYGAGPSMTHSLLNNNKAAVDGLRGLVLLLHIGVKSSI 290
           K+Y  S     + + + TR K +YGAG +M   L + N        GL +++ + ++S+ 
Sbjct: 250 KLYAQSHSSTLFQLFVGTRNKPMYGAGTNMQDMLESEN--------GLPIVIRVSLRSNF 301

Query: 289 RVVGDLVRPSFHHHAICNLYVDGTLG-PHYIILSNTTC 179
           RVV +L++P+FHH A+C L +DG     H   + N+TC
Sbjct: 302 RVVWNLIKPAFHHRAVCLLVLDGAYDKKHRTQVYNSTC 339


>ref|XP_002299943.2| hypothetical protein POPTR_0001s27420g [Populus trichocarpa]
           gi|550348311|gb|EEE84748.2| hypothetical protein
           POPTR_0001s27420g [Populus trichocarpa]
          Length = 301

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 33/98 (33%), Positives = 55/98 (56%), Gaps = 1/98 (1%)
 Frame = -1

Query: 469 KMYVDSERRADWGVNIETRRKAVYGAGPSMTHSLLNNNKAAVDGLRGLVLLLHIGVKSSI 290
           K+Y  S     + + + TR K +YGAG +M   L + N        GL +++ + ++S+ 
Sbjct: 209 KLYAQSHSSTLFQLFVGTRNKPMYGAGTNMQDMLESEN--------GLPIVIRVSLRSNF 260

Query: 289 RVVGDLVRPSFHHHAICNLYVDGTLG-PHYIILSNTTC 179
           RVV +L++P+FHH A+C L +DG     H   + N+TC
Sbjct: 261 RVVWNLIKPAFHHRAVCLLVLDGAYDKKHRTQVYNSTC 298


>gb|ABK92537.1| unknown [Populus trichocarpa]
          Length = 342

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 33/98 (33%), Positives = 55/98 (56%), Gaps = 1/98 (1%)
 Frame = -1

Query: 469 KMYVDSERRADWGVNIETRRKAVYGAGPSMTHSLLNNNKAAVDGLRGLVLLLHIGVKSSI 290
           K+Y  S     + + + TR K +YGAG +M   L + N        GL +++ + ++S+ 
Sbjct: 250 KLYAQSHSSTLFQLFVGTRNKPMYGAGTNMQDMLESEN--------GLPIVIRVSLRSNF 301

Query: 289 RVVGDLVRPSFHHHAICNLYVDGTLG-PHYIILSNTTC 179
           RVV +L++P+FHH A+C L +DG     H   + N+TC
Sbjct: 302 RVVWNLIKPAFHHRAVCLLVLDGAYDKKHRTQVYNSTC 339


>ref|XP_002313304.2| hypothetical protein POPTR_0009s06610g [Populus trichocarpa]
           gi|550331181|gb|EEE87259.2| hypothetical protein
           POPTR_0009s06610g [Populus trichocarpa]
          Length = 303

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 32/98 (32%), Positives = 53/98 (54%), Gaps = 1/98 (1%)
 Frame = -1

Query: 469 KMYVDSERRADWGVNIETRRKAVYGAGPSMTHSLLNNNKAAVDGLRGLVLLLHIGVKSSI 290
           K+Y  S     + +++ TR K +YGAG +M   L + N        GL +++ + ++S+ 
Sbjct: 211 KLYAQSHTSTLFQLSVGTRNKPMYGAGRNMQDMLESGN--------GLPIVIQLSLRSNF 262

Query: 289 RVVGDLVRPSFHHHAICNLYVDGTLG-PHYIILSNTTC 179
           RVV +L++P FHH A+C L +D      H     N+TC
Sbjct: 263 RVVWNLIKPKFHHQALCLLVLDSAYDKKHRTQAYNSTC 300


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