BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00029598
         (530 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_001751645.1| predicted protein [Physcomitrella patens] gi...   137   2e-30
ref|XP_006827784.1| hypothetical protein AMTR_s00009p00265760 [A...   135   7e-30
gb|EMT30865.1| General transcription factor IIH subunit 4 [Aegil...   129   3e-28
gb|EMS59242.1| General transcription factor IIH subunit 4 [Triti...   129   3e-28
ref|XP_003542754.1| PREDICTED: general transcription factor IIH ...   129   5e-28
emb|CAN81292.1| hypothetical protein VITISV_005315 [Vitis vinifera]   128   9e-28
ref|XP_006285003.1| hypothetical protein CARUB_v10006310mg [Caps...   127   1e-27
ref|XP_002868091.1| hypothetical protein ARALYDRAFT_493174 [Arab...   127   2e-27
emb|CAJ86205.1| B0213E10.4 [Oryza sativa Indica Group]                127   2e-27
ref|XP_006653885.1| PREDICTED: general transcription factor IIH ...   126   3e-27
gb|ESW31311.1| hypothetical protein PHAVU_002G227900g [Phaseolus...   126   3e-27
ref|XP_002519045.1| tfiih, polypeptide, putative [Ricinus commun...   126   3e-27
gb|EEE61913.1| hypothetical protein OsJ_16644 [Oryza sativa Japo...   126   3e-27
gb|EEC78260.1| hypothetical protein OsI_17944 [Oryza sativa Indi...   126   3e-27
emb|CAE05735.1| OSJNBb0017I01.15 [Oryza sativa Japonica Group]        126   3e-27
ref|XP_006414285.1| hypothetical protein EUTSA_v10025179mg [Eutr...   125   5e-27
ref|XP_004232855.1| PREDICTED: general transcription factor IIH ...   125   5e-27
ref|NP_974564.1| transcription factor-related protein [Arabidops...   125   5e-27
ref|NP_193435.2| transcription factor-related protein [Arabidops...   125   5e-27
ref|XP_003637396.1| General transcription factor IIH subunit [Me...   125   5e-27

>ref|XP_001751645.1| predicted protein [Physcomitrella patens]
           gi|162697626|gb|EDQ83962.1| predicted protein
           [Physcomitrella patens]
          Length = 462

 Score =  137 bits (344), Expect = 2e-30
 Identities = 64/153 (41%), Positives = 103/153 (67%), Gaps = 4/153 (2%)
 Frame = -3

Query: 489 QGYIVVEINSKVYAYTPSPVQKCILNLFIRIEYELPNMIVGTLTREKMYEAFDLGINSKQ 310
           +G++VVE N KVYAYT S +Q  IL  F R+EY+LPN++V TLT+E + +A   GI+++Q
Sbjct: 299 EGFVVVETNFKVYAYTSSKLQTEILRCFTRLEYQLPNLVVATLTKESVNKALGSGISAEQ 358

Query: 309 VVQFFSKHSN----KTTDKVPYSVATQIKLWEADKQRVKFDDAYLYDDFPTEDLYTNTLK 142
           ++ F  KH++    +    VP +V+ Q++LWE D+ RV+F+ AY YDDFPT  +Y   + 
Sbjct: 359 IISFLRKHAHPHVAQKIPVVPETVSDQLRLWETDRNRVQFEPAYFYDDFPTMAIYEAVVA 418

Query: 141 HSMKIGAFLWKHQGRKQVIVDSEKDGEMRKYMK 43
           H+  +G  L++    K++IV S+   +MR+Y++
Sbjct: 419 HARDLGGLLFEDASAKRLIVRSDLHEDMRQYIR 451


>ref|XP_006827784.1| hypothetical protein AMTR_s00009p00265760 [Amborella trichopoda]
           gi|548832404|gb|ERM95200.1| hypothetical protein
           AMTR_s00009p00265760 [Amborella trichopoda]
          Length = 469

 Score =  135 bits (339), Expect = 7e-30
 Identities = 64/163 (39%), Positives = 107/163 (65%), Gaps = 4/163 (2%)
 Frame = -3

Query: 519 MSLPLNNLQYQGYIVVEINSKVYAYTPSPVQKCILNLFIRIEYELPNMIVGTLTREKMYE 340
           +SL  ++ + +G++VVE N ++YAY+ S +   IL LF RIEY+LPN+IVG +T+E +Y 
Sbjct: 304 VSLSDSSSRKEGFVVVETNFRLYAYSTSKLHCEILRLFCRIEYQLPNLIVGAITKESLYT 363

Query: 339 AFDLGINSKQVVQFFSKHSN----KTTDKVPYSVATQIKLWEADKQRVKFDDAYLYDDFP 172
           AFD GI S+Q++ F  +H++    +    VP +V  QI+LWE D  RV+ + A+ Y+DFP
Sbjct: 364 AFDNGITSEQIILFLQQHAHPRVAQKAPAVPENVTDQIRLWETDLNRVEMNLAHFYEDFP 423

Query: 171 TEDLYTNTLKHSMKIGAFLWKHQGRKQVIVDSEKDGEMRKYMK 43
           + D+Y     ++ ++G FLW+   + ++IV  E   EM+ +++
Sbjct: 424 SMDIYEAACDYARELGGFLWEDSKKMRLIVRGEMHEEMKDFLR 466


>gb|EMT30865.1| General transcription factor IIH subunit 4 [Aegilops tauschii]
          Length = 383

 Score =  129 bits (325), Expect = 3e-28
 Identities = 66/163 (40%), Positives = 109/163 (66%), Gaps = 4/163 (2%)
 Frame = -3

Query: 519 MSLPLNNLQYQGYIVVEINSKVYAYTPSPVQKCILNLFIRIEYELPNMIVGTLTREKMYE 340
           M L L  LQ QG +VVE N ++YAY+ S +   IL LF R+EY+LPN+IVG +T+E +Y 
Sbjct: 219 MELGLVKLQ-QGIVVVETNFRLYAYSASKLHCEILRLFSRVEYQLPNLIVGAITKESLYG 277

Query: 339 AFDLGINSKQVVQFFSKHSN-KTTDK---VPYSVATQIKLWEADKQRVKFDDAYLYDDFP 172
           AFD GI ++Q++ F  ++++ +  DK   VP +V  QI+LWE D+ RV+   +++Y+DFP
Sbjct: 278 AFDNGITAEQIISFLQQNAHPRVIDKIPIVPENVTDQIRLWENDRNRVEMVLSHVYEDFP 337

Query: 171 TEDLYTNTLKHSMKIGAFLWKHQGRKQVIVDSEKDGEMRKYMK 43
           ++D++     H+   G  LW+   + ++IV++E   EMR++++
Sbjct: 338 SKDMFEQCCDHARDNGYLLWEDAKKMRLIVNAEFHQEMREFLR 380


>gb|EMS59242.1| General transcription factor IIH subunit 4 [Triticum urartu]
          Length = 354

 Score =  129 bits (325), Expect = 3e-28
 Identities = 66/163 (40%), Positives = 109/163 (66%), Gaps = 4/163 (2%)
 Frame = -3

Query: 519 MSLPLNNLQYQGYIVVEINSKVYAYTPSPVQKCILNLFIRIEYELPNMIVGTLTREKMYE 340
           M L L  LQ QG +VVE N ++YAY+ S +   IL LF R+EY+LPN+IVG +T+E +Y 
Sbjct: 190 MELGLVKLQ-QGIVVVETNFRLYAYSASKLHCEILRLFSRVEYQLPNLIVGAITKESLYG 248

Query: 339 AFDLGINSKQVVQFFSKHSN-KTTDK---VPYSVATQIKLWEADKQRVKFDDAYLYDDFP 172
           AFD GI ++Q++ F  ++++ +  DK   VP +V  QI+LWE D+ RV+   +++Y+DFP
Sbjct: 249 AFDNGITAEQIISFLQQNAHPRVIDKIPIVPENVTDQIRLWENDRNRVEMVLSHVYEDFP 308

Query: 171 TEDLYTNTLKHSMKIGAFLWKHQGRKQVIVDSEKDGEMRKYMK 43
           ++D++     H+   G  LW+   + ++IV++E   EMR++++
Sbjct: 309 SKDMFEQCCDHARDNGYLLWEDAKKMRLIVNAEFHQEMREFLR 351


>ref|XP_003542754.1| PREDICTED: general transcription factor IIH subunit 4-like isoform
           X1 [Glycine max]
          Length = 451

 Score =  129 bits (323), Expect = 5e-28
 Identities = 62/163 (38%), Positives = 103/163 (63%), Gaps = 4/163 (2%)
 Frame = -3

Query: 519 MSLPLNNLQYQGYIVVEINSKVYAYTPSPVQKCILNLFIRIEYELPNMIVGTLTREKMYE 340
           MSL  ++ + QG++VVE N +VYAY+ S +   IL LF R+EY+LPN+IVG +T+E +Y 
Sbjct: 286 MSLADSSSRKQGFVVVETNFRVYAYSTSKLHCEILRLFSRVEYQLPNLIVGAITKESLYS 345

Query: 339 AFDLGINSKQVVQFFSKHSN----KTTDKVPYSVATQIKLWEADKQRVKFDDAYLYDDFP 172
           AF+ GI ++Q++ F  ++++    +    VP +V  QI+LWEAD  RV+  DAY YD+FP
Sbjct: 346 AFENGITAEQIITFLQQNAHPRVAERIPSVPENVTEQIRLWEADLNRVEMTDAYYYDEFP 405

Query: 171 TEDLYTNTLKHSMKIGAFLWKHQGRKQVIVDSEKDGEMRKYMK 43
           + D++      + +    LW+   +  ++V +E    +R Y++
Sbjct: 406 SRDVFEGACDCAREWNGLLWEDSKKMHMVVKTEVHQYVRDYLR 448


>emb|CAN81292.1| hypothetical protein VITISV_005315 [Vitis vinifera]
          Length = 451

 Score =  128 bits (321), Expect = 9e-28
 Identities = 61/163 (37%), Positives = 105/163 (64%), Gaps = 4/163 (2%)
 Frame = -3

Query: 519 MSLPLNNLQYQGYIVVEINSKVYAYTPSPVQKCILNLFIRIEYELPNMIVGTLTREKMYE 340
           MSL   + + QG++VVE N ++YAY+ S +   IL LF R+EY+LPN+IVG +T+E +Y 
Sbjct: 286 MSLSDTSSRKQGFVVVETNFRLYAYSSSKLHCEILRLFSRVEYQLPNLIVGAITKESLYN 345

Query: 339 AFDLGINSKQVVQFFSKHSN----KTTDKVPYSVATQIKLWEADKQRVKFDDAYLYDDFP 172
           AF+ GI ++Q++ F  ++++    + T  VP +V  QI+LWE D  RV+   ++LYD+FP
Sbjct: 346 AFENGITAEQIISFLQQNAHPRVAERTPAVPENVTDQIRLWETDLNRVETMPSHLYDEFP 405

Query: 171 TEDLYTNTLKHSMKIGAFLWKHQGRKQVIVDSEKDGEMRKYMK 43
           + D++      + + G  LW+   + +++V +E    MR+Y++
Sbjct: 406 SRDVFEAACDFAREYGGLLWEDSKKMRLVVKAEIHLHMREYLR 448


>ref|XP_006285003.1| hypothetical protein CARUB_v10006310mg [Capsella rubella]
           gi|482553708|gb|EOA17901.1| hypothetical protein
           CARUB_v10006310mg [Capsella rubella]
          Length = 452

 Score =  127 bits (320), Expect = 1e-27
 Identities = 61/162 (37%), Positives = 107/162 (66%), Gaps = 4/162 (2%)
 Frame = -3

Query: 519 MSLPLNNLQYQGYIVVEINSKVYAYTPSPVQKCILNLFIRIEYELPNMIVGTLTREKMYE 340
           +SL  ++ + +G++V+E N ++YAY+ S +Q  IL LF RIEY+LPN+I   +T+E +Y 
Sbjct: 286 VSLSDSSARKEGFVVMETNFRMYAYSTSKLQCEILRLFARIEYQLPNLIACAITKESLYN 345

Query: 339 AFDLGINSKQVVQFFSKHSN-KTTDKV---PYSVATQIKLWEADKQRVKFDDAYLYDDFP 172
           AFD GI S Q++ F  ++S+ +  D+V   P +V  QI+LWE+D +R++   A+ YD+FP
Sbjct: 346 AFDNGITSDQIITFLQQNSHPRCADRVPAIPENVTDQIRLWESDLKRIEMTQAHFYDEFP 405

Query: 171 TEDLYTNTLKHSMKIGAFLWKHQGRKQVIVDSEKDGEMRKYM 46
           ++D++      + + G  LW+   R +++V SE   +MR+++
Sbjct: 406 SKDVFEAACDFAREWGGLLWEDSKRMRLVVKSEVHNQMREFL 447


>ref|XP_002868091.1| hypothetical protein ARALYDRAFT_493174 [Arabidopsis lyrata subsp.
           lyrata] gi|297313927|gb|EFH44350.1| hypothetical protein
           ARALYDRAFT_493174 [Arabidopsis lyrata subsp. lyrata]
          Length = 452

 Score =  127 bits (319), Expect = 2e-27
 Identities = 61/162 (37%), Positives = 106/162 (65%), Gaps = 4/162 (2%)
 Frame = -3

Query: 519 MSLPLNNLQYQGYIVVEINSKVYAYTPSPVQKCILNLFIRIEYELPNMIVGTLTREKMYE 340
           +SL  ++ + +G++V+E N ++YAY+ S +Q  IL LF RIEY+LPN+I   +T+E +Y 
Sbjct: 286 VSLADSSARKEGFVVMETNFRMYAYSTSKLQCEILRLFARIEYQLPNLIACAITKESLYN 345

Query: 339 AFDLGINSKQVVQFFSKHSN-KTTDKV---PYSVATQIKLWEADKQRVKFDDAYLYDDFP 172
           AFD GI S Q++ F  ++S+ +  D+V   P +V  QI+LWE D +R++   A+ YD+FP
Sbjct: 346 AFDNGITSDQIITFLQQNSHPRCADRVPSIPENVTDQIRLWETDLKRIEMTQAHFYDEFP 405

Query: 171 TEDLYTNTLKHSMKIGAFLWKHQGRKQVIVDSEKDGEMRKYM 46
           ++D++      + + G  LW+   R +++V SE   +MR+++
Sbjct: 406 SKDVFEAACDFAREWGGLLWEDSKRMRLVVKSEVHNQMREFL 447


>emb|CAJ86205.1| B0213E10.4 [Oryza sativa Indica Group]
          Length = 470

 Score =  127 bits (318), Expect = 2e-27
 Identities = 60/153 (39%), Positives = 103/153 (67%), Gaps = 4/153 (2%)
 Frame = -3

Query: 489 QGYIVVEINSKVYAYTPSPVQKCILNLFIRIEYELPNMIVGTLTREKMYEAFDLGINSKQ 310
           QG++VVE N ++YAY+ S +   IL LF R+EY+LPN+IVG++T+E +Y AF+ GI ++Q
Sbjct: 315 QGFVVVETNFRMYAYSTSRLHCEILRLFSRVEYQLPNLIVGSITKESLYGAFENGITAEQ 374

Query: 309 VVQFFSKHSN-KTTDK---VPYSVATQIKLWEADKQRVKFDDAYLYDDFPTEDLYTNTLK 142
           ++ F  ++++ +  DK   VP +V  QI+LWE D+ RV    ++LY+DFP++D++     
Sbjct: 375 IISFLQQNAHPRVADKIPAVPENVTDQIRLWETDRNRVDMTLSHLYEDFPSKDMFDQCCD 434

Query: 141 HSMKIGAFLWKHQGRKQVIVDSEKDGEMRKYMK 43
           ++   G  LW+   + ++IV  E   EMR++++
Sbjct: 435 YARDHGCLLWEDAKKMRLIVRVEFHSEMREFLR 467


>ref|XP_006653885.1| PREDICTED: general transcription factor IIH subunit 4-like [Oryza
           brachyantha]
          Length = 451

 Score =  126 bits (317), Expect = 3e-27
 Identities = 61/162 (37%), Positives = 108/162 (66%), Gaps = 4/162 (2%)
 Frame = -3

Query: 516 SLPLNNLQYQGYIVVEINSKVYAYTPSPVQKCILNLFIRIEYELPNMIVGTLTREKMYEA 337
           SL  ++   +G++VVE N ++YAY+ S +   IL LF R+EY+LPN+IVG++T+E +Y A
Sbjct: 287 SLSDSSSSKEGFVVVETNFRMYAYSTSKLHCEILRLFSRVEYQLPNLIVGSITKESLYGA 346

Query: 336 FDLGINSKQVVQFFSKHSN-KTTDK---VPYSVATQIKLWEADKQRVKFDDAYLYDDFPT 169
           F+ GI ++Q++ F  ++++ +  DK   VP +V  QI+LWE D+ RV+   ++LY+DFP+
Sbjct: 347 FENGITAEQIISFLQQNAHPRVADKIPAVPENVTDQIRLWETDRNRVEMTLSHLYEDFPS 406

Query: 168 EDLYTNTLKHSMKIGAFLWKHQGRKQVIVDSEKDGEMRKYMK 43
           +D++     ++   G  LW+   + ++IV  E   EMR++++
Sbjct: 407 KDMFEQCCDYARDHGCLLWEDAKKMRLIVRVEFHPEMREFLR 448


>gb|ESW31311.1| hypothetical protein PHAVU_002G227900g [Phaseolus vulgaris]
          Length = 451

 Score =  126 bits (317), Expect = 3e-27
 Identities = 62/163 (38%), Positives = 102/163 (62%), Gaps = 4/163 (2%)
 Frame = -3

Query: 519 MSLPLNNLQYQGYIVVEINSKVYAYTPSPVQKCILNLFIRIEYELPNMIVGTLTREKMYE 340
           MSL  ++ + QG++VVE N +VYAY+ S +   IL LF R+EY+LPN+IVG +T+E +Y 
Sbjct: 286 MSLADSSSRKQGFVVVETNFRVYAYSTSKLHCEILRLFSRVEYQLPNLIVGAITKESLYN 345

Query: 339 AFDLGINSKQVVQFFSKHSNKTTDK----VPYSVATQIKLWEADKQRVKFDDAYLYDDFP 172
           AF+ GI + Q+V F  ++++    +    VP +V  QI+LWEAD  RV+  DAY YD+FP
Sbjct: 346 AFENGITADQIVTFIQQNAHPRVAERIPCVPENVTDQIRLWEADLNRVEMTDAYYYDEFP 405

Query: 171 TEDLYTNTLKHSMKIGAFLWKHQGRKQVIVDSEKDGEMRKYMK 43
           + D++      + +    LW+   +  ++V +E    +R +++
Sbjct: 406 SRDVFEGACDCAREWNGLLWEDSKKMHMVVKTEVHPYVRDFLR 448


>ref|XP_002519045.1| tfiih, polypeptide, putative [Ricinus communis]
           gi|223541708|gb|EEF43256.1| tfiih, polypeptide, putative
           [Ricinus communis]
          Length = 451

 Score =  126 bits (317), Expect = 3e-27
 Identities = 59/163 (36%), Positives = 104/163 (63%), Gaps = 4/163 (2%)
 Frame = -3

Query: 519 MSLPLNNLQYQGYIVVEINSKVYAYTPSPVQKCILNLFIRIEYELPNMIVGTLTREKMYE 340
           MSL  ++ + QG++VVE N ++YAY+ S +   I+ LF R+EY+LPN++VG +T+E +Y 
Sbjct: 286 MSLTDSSSRKQGFVVVETNFRMYAYSTSKLHCEIMRLFSRVEYQLPNLVVGAMTKESLYS 345

Query: 339 AFDLGINSKQVVQFFSKHSN----KTTDKVPYSVATQIKLWEADKQRVKFDDAYLYDDFP 172
           AF+ GI ++Q++ F  ++++    +    VP +V  QI+LWE+D  RV+   A+LYD+FP
Sbjct: 346 AFENGITAEQIISFLQQNAHPRVAERIPSVPENVTDQIRLWESDMNRVEMTPAHLYDEFP 405

Query: 171 TEDLYTNTLKHSMKIGAFLWKHQGRKQVIVDSEKDGEMRKYMK 43
           + D++      +      LW+   R +++V +E    MR+Y++
Sbjct: 406 SRDVFEAACNFARDWNGLLWEDSKRMRMVVKAEIHLNMREYLR 448


>gb|EEE61913.1| hypothetical protein OsJ_16644 [Oryza sativa Japonica Group]
          Length = 427

 Score =  126 bits (316), Expect = 3e-27
 Identities = 61/162 (37%), Positives = 107/162 (66%), Gaps = 4/162 (2%)
 Frame = -3

Query: 516 SLPLNNLQYQGYIVVEINSKVYAYTPSPVQKCILNLFIRIEYELPNMIVGTLTREKMYEA 337
           SL  ++   +G++VVE N ++YAY+ S +   IL LF R+EY+LPN+IVG++T+E +Y A
Sbjct: 263 SLSDSSSNKEGFVVVETNFRMYAYSTSRLHCEILRLFSRVEYQLPNLIVGSITKESLYGA 322

Query: 336 FDLGINSKQVVQFFSKHSN-KTTDK---VPYSVATQIKLWEADKQRVKFDDAYLYDDFPT 169
           F+ GI ++Q++ F  ++++ +  DK   VP +V  QI+LWE D+ RV    ++LY+DFP+
Sbjct: 323 FENGITAEQIISFLQQNAHPRVADKIPAVPENVTDQIRLWETDRNRVDMTLSHLYEDFPS 382

Query: 168 EDLYTNTLKHSMKIGAFLWKHQGRKQVIVDSEKDGEMRKYMK 43
           +D++     ++   G  LW+   + ++IV  E   EMR++++
Sbjct: 383 KDMFDQCCDYARDHGCLLWEDAKKMRLIVRVEFHSEMREFLR 424


>gb|EEC78260.1| hypothetical protein OsI_17944 [Oryza sativa Indica Group]
          Length = 459

 Score =  126 bits (316), Expect = 3e-27
 Identities = 61/162 (37%), Positives = 107/162 (66%), Gaps = 4/162 (2%)
 Frame = -3

Query: 516 SLPLNNLQYQGYIVVEINSKVYAYTPSPVQKCILNLFIRIEYELPNMIVGTLTREKMYEA 337
           SL  ++   +G++VVE N ++YAY+ S +   IL LF R+EY+LPN+IVG++T+E +Y A
Sbjct: 295 SLSDSSSNKEGFVVVETNFRMYAYSTSRLHCEILRLFSRVEYQLPNLIVGSITKESLYGA 354

Query: 336 FDLGINSKQVVQFFSKHSN-KTTDK---VPYSVATQIKLWEADKQRVKFDDAYLYDDFPT 169
           F+ GI ++Q++ F  ++++ +  DK   VP +V  QI+LWE D+ RV    ++LY+DFP+
Sbjct: 355 FENGITAEQIISFLQQNAHPRVADKIPAVPENVTDQIRLWETDRNRVDMTLSHLYEDFPS 414

Query: 168 EDLYTNTLKHSMKIGAFLWKHQGRKQVIVDSEKDGEMRKYMK 43
           +D++     ++   G  LW+   + ++IV  E   EMR++++
Sbjct: 415 KDMFDQCCDYARDHGCLLWEDAKKMRLIVRVEFHSEMREFLR 456


>emb|CAE05735.1| OSJNBb0017I01.15 [Oryza sativa Japonica Group]
          Length = 451

 Score =  126 bits (316), Expect = 3e-27
 Identities = 61/162 (37%), Positives = 107/162 (66%), Gaps = 4/162 (2%)
 Frame = -3

Query: 516 SLPLNNLQYQGYIVVEINSKVYAYTPSPVQKCILNLFIRIEYELPNMIVGTLTREKMYEA 337
           SL  ++   +G++VVE N ++YAY+ S +   IL LF R+EY+LPN+IVG++T+E +Y A
Sbjct: 287 SLSDSSSNKEGFVVVETNFRMYAYSTSRLHCEILRLFSRVEYQLPNLIVGSITKESLYGA 346

Query: 336 FDLGINSKQVVQFFSKHSN-KTTDK---VPYSVATQIKLWEADKQRVKFDDAYLYDDFPT 169
           F+ GI ++Q++ F  ++++ +  DK   VP +V  QI+LWE D+ RV    ++LY+DFP+
Sbjct: 347 FENGITAEQIISFLQQNAHPRVADKIPAVPENVTDQIRLWETDRNRVDMTLSHLYEDFPS 406

Query: 168 EDLYTNTLKHSMKIGAFLWKHQGRKQVIVDSEKDGEMRKYMK 43
           +D++     ++   G  LW+   + ++IV  E   EMR++++
Sbjct: 407 KDMFDQCCDYARDHGCLLWEDAKKMRLIVRVEFHSEMREFLR 448


>ref|XP_006414285.1| hypothetical protein EUTSA_v10025179mg [Eutrema salsugineum]
           gi|557115455|gb|ESQ55738.1| hypothetical protein
           EUTSA_v10025179mg [Eutrema salsugineum]
          Length = 452

 Score =  125 bits (315), Expect = 5e-27
 Identities = 60/162 (37%), Positives = 107/162 (66%), Gaps = 4/162 (2%)
 Frame = -3

Query: 519 MSLPLNNLQYQGYIVVEINSKVYAYTPSPVQKCILNLFIRIEYELPNMIVGTLTREKMYE 340
           +SL  ++++ +GY+++E N ++YAY+ S +Q  IL LF RIEY+LPN+I   +T+E +Y 
Sbjct: 286 VSLADSSIRKEGYVMMETNFRMYAYSTSKLQCEILRLFARIEYQLPNLIACAITKESLYN 345

Query: 339 AFDLGINSKQVVQFFSKHSN-KTTDKV---PYSVATQIKLWEADKQRVKFDDAYLYDDFP 172
           AFD GI S Q++ F  ++S+ +  D+V   P +V  QI+LWE+D +R++   A+ YD+FP
Sbjct: 346 AFDNGITSDQIITFLQQNSHPRCADRVPSIPENVTDQIRLWESDLKRIEMTQAHFYDEFP 405

Query: 171 TEDLYTNTLKHSMKIGAFLWKHQGRKQVIVDSEKDGEMRKYM 46
           ++D++      + +    LW+   R +++V SE   +MR+++
Sbjct: 406 SKDVFEAACDFAREWRGLLWEDSKRMRLVVKSEVHNKMREFL 447


>ref|XP_004232855.1| PREDICTED: general transcription factor IIH subunit 4-like [Solanum
           lycopersicum]
          Length = 453

 Score =  125 bits (315), Expect = 5e-27
 Identities = 59/163 (36%), Positives = 104/163 (63%), Gaps = 4/163 (2%)
 Frame = -3

Query: 519 MSLPLNNLQYQGYIVVEINSKVYAYTPSPVQKCILNLFIRIEYELPNMIVGTLTREKMYE 340
           +SL     + QG+IV+E N ++YAY+ S +   IL LF R+EY+LPN+IVG + +E +Y+
Sbjct: 287 ISLADTTTRKQGFIVIETNFRLYAYSTSKLHCEILRLFARVEYQLPNLIVGAINKESLYK 346

Query: 339 AFDLGINSKQVVQFFSKHSN----KTTDKVPYSVATQIKLWEADKQRVKFDDAYLYDDFP 172
           AF  GI S+Q+V F  ++++    +    VP +V  QI+LWE+D  RV+   A+ YD+FP
Sbjct: 347 AFQNGITSEQIVSFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVEMTPAHFYDEFP 406

Query: 171 TEDLYTNTLKHSMKIGAFLWKHQGRKQVIVDSEKDGEMRKYMK 43
           ++D++      + + G  LW+   R +++V ++   EM+++++
Sbjct: 407 SKDVFEAACDFAREYGGLLWEDSKRMRLVVKADILAEMKEFLR 449


>ref|NP_974564.1| transcription factor-related protein [Arabidopsis thaliana]
           gi|332658438|gb|AEE83838.1| transcription factor-related
           protein [Arabidopsis thaliana]
          Length = 462

 Score =  125 bits (315), Expect = 5e-27
 Identities = 61/162 (37%), Positives = 105/162 (64%), Gaps = 4/162 (2%)
 Frame = -3

Query: 519 MSLPLNNLQYQGYIVVEINSKVYAYTPSPVQKCILNLFIRIEYELPNMIVGTLTREKMYE 340
           +SL  ++ + +G++V+E N ++YAY+ S +Q  IL LF RIEY+LPN+I   +T+E +Y 
Sbjct: 286 VSLADSSARKEGFVVMETNFRMYAYSTSKLQCEILRLFARIEYQLPNLIACAITKESLYN 345

Query: 339 AFDLGINSKQVVQFFSKHSN-KTTDKV---PYSVATQIKLWEADKQRVKFDDAYLYDDFP 172
           AFD GI S Q++ F  ++S+ +  D+V   P +V  QI+LWE D QR++   A+ YD+FP
Sbjct: 346 AFDNGITSDQIITFLQQNSHPRCADRVPSIPENVTDQIRLWETDLQRIEMTQAHFYDEFP 405

Query: 171 TEDLYTNTLKHSMKIGAFLWKHQGRKQVIVDSEKDGEMRKYM 46
           ++D++      + +    LW+   R +++V SE   +MR+++
Sbjct: 406 SKDVFEAACDFAREWRGLLWEDSKRMRLVVKSEVHNQMREFL 447


>ref|NP_193435.2| transcription factor-related protein [Arabidopsis thaliana]
           gi|51969678|dbj|BAD43531.1| unnamed protein product
           [Arabidopsis thaliana] gi|115646777|gb|ABJ17114.1|
           At4g17020 [Arabidopsis thaliana]
           gi|332658439|gb|AEE83839.1| transcription factor-related
           protein [Arabidopsis thaliana]
          Length = 452

 Score =  125 bits (315), Expect = 5e-27
 Identities = 61/162 (37%), Positives = 105/162 (64%), Gaps = 4/162 (2%)
 Frame = -3

Query: 519 MSLPLNNLQYQGYIVVEINSKVYAYTPSPVQKCILNLFIRIEYELPNMIVGTLTREKMYE 340
           +SL  ++ + +G++V+E N ++YAY+ S +Q  IL LF RIEY+LPN+I   +T+E +Y 
Sbjct: 286 VSLADSSARKEGFVVMETNFRMYAYSTSKLQCEILRLFARIEYQLPNLIACAITKESLYN 345

Query: 339 AFDLGINSKQVVQFFSKHSN-KTTDKV---PYSVATQIKLWEADKQRVKFDDAYLYDDFP 172
           AFD GI S Q++ F  ++S+ +  D+V   P +V  QI+LWE D QR++   A+ YD+FP
Sbjct: 346 AFDNGITSDQIITFLQQNSHPRCADRVPSIPENVTDQIRLWETDLQRIEMTQAHFYDEFP 405

Query: 171 TEDLYTNTLKHSMKIGAFLWKHQGRKQVIVDSEKDGEMRKYM 46
           ++D++      + +    LW+   R +++V SE   +MR+++
Sbjct: 406 SKDVFEAACDFAREWRGLLWEDSKRMRLVVKSEVHNQMREFL 447


>ref|XP_003637396.1| General transcription factor IIH subunit [Medicago truncatula]
           gi|355503331|gb|AES84534.1| General transcription factor
           IIH subunit [Medicago truncatula]
          Length = 451

 Score =  125 bits (315), Expect = 5e-27
 Identities = 60/163 (36%), Positives = 103/163 (63%), Gaps = 4/163 (2%)
 Frame = -3

Query: 519 MSLPLNNLQYQGYIVVEINSKVYAYTPSPVQKCILNLFIRIEYELPNMIVGTLTREKMYE 340
           +S+  ++ + +G++VVE N +VYAY+ S +   IL LF R+EY+LPN+IVG +T+E +Y 
Sbjct: 286 VSMTESSSRKEGFVVVETNFRVYAYSTSKLHCEILRLFSRVEYQLPNLIVGAITKESLYN 345

Query: 339 AFDLGINSKQVVQFFSKHSN----KTTDKVPYSVATQIKLWEADKQRVKFDDAYLYDDFP 172
           AFD GI + Q+V FF ++++    +    VP +V  QI+LWE+D  RV+  +AY YD+FP
Sbjct: 346 AFDNGITADQIVSFFRQNAHPRVAQRIPAVPENVTDQIRLWESDLNRVEMTEAYYYDEFP 405

Query: 171 TEDLYTNTLKHSMKIGAFLWKHQGRKQVIVDSEKDGEMRKYMK 43
           + D++      + +    LW+   +  ++V SE    +R +++
Sbjct: 406 SRDVFEGACDCAREWSGLLWEDSKKMHLVVKSEVHTYVRDFLR 448