BLASTX nr result

ID: Ephedra28_contig00029556 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00029556
         (622 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004965616.1| PREDICTED: poly(A) polymerase-like isoform X...    68   2e-09
ref|XP_004965615.1| PREDICTED: poly(A) polymerase-like isoform X...    68   2e-09
ref|XP_003620365.1| Poly(A) polymerase [Medicago truncatula] gi|...    68   2e-09
ref|XP_003631046.1| Poly(A) polymerase [Medicago truncatula] gi|...    67   3e-09
ref|XP_006853732.1| hypothetical protein AMTR_s00056p00170310 [A...    67   5e-09
ref|XP_002524874.1| Poly(A) polymerase alpha, putative [Ricinus ...    67   5e-09
gb|ABR18412.1| unknown [Picea sitchensis]                              67   5e-09
ref|XP_002308592.2| hypothetical protein POPTR_0006s25200g [Popu...    66   7e-09
gb|EXC25192.1| Poly(A) polymerase [Morus notabilis]                    65   1e-08
ref|XP_006855783.1| hypothetical protein AMTR_s00044p00207970 [A...    65   1e-08
gb|EOY04559.1| Poly(A) polymerase 1 [Theobroma cacao]                  65   1e-08
gb|EMJ11541.1| hypothetical protein PRUPE_ppa001856mg [Prunus pe...    65   1e-08
gb|AFW76503.1| hypothetical protein ZEAMMB73_102594 [Zea mays] g...    65   1e-08
gb|AFW76502.1| hypothetical protein ZEAMMB73_102594 [Zea mays]         65   1e-08
gb|AFW76500.1| hypothetical protein ZEAMMB73_102594 [Zea mays] g...    65   1e-08
ref|XP_002892977.1| nucleotidyltransferase family protein [Arabi...    65   1e-08
gb|ACR37948.1| unknown [Zea mays]                                      65   1e-08
ref|NP_001168358.1| hypothetical protein [Zea mays] gi|223947741...    65   1e-08
ref|XP_006493032.1| PREDICTED: poly(A) polymerase-like isoform X...    65   2e-08
ref|XP_006493030.1| PREDICTED: poly(A) polymerase-like isoform X...    65   2e-08

>ref|XP_004965616.1| PREDICTED: poly(A) polymerase-like isoform X2 [Setaria italica]
          Length = 689

 Score = 67.8 bits (164), Expect = 2e-09
 Identities = 32/89 (35%), Positives = 56/89 (62%), Gaps = 1/89 (1%)
 Frame = -1

Query: 610 VQVENGTQGLLQYQPYPNPFTTPSKHY-HCIYYIWLKKKKGFIRKEAQ*FDIIETLKKFK 434
           +++E  T G+LQ  PYP+ +  PS+   HC +++ L +K+G   +E Q FDI  T+++F+
Sbjct: 395 LKIERDTYGMLQCHPYPHEYADPSRQSAHCAFFMGLSRKEGVKIQEGQQFDIRGTVEEFR 454

Query: 433 SIVNGYVSKKYGKKISVEYLARKDISEYV 347
             +N Y+  K G +++V ++ RK I  YV
Sbjct: 455 HEINSYMFWKPGMELAVSHVRRKQIPAYV 483


>ref|XP_004965615.1| PREDICTED: poly(A) polymerase-like isoform X1 [Setaria italica]
          Length = 705

 Score = 67.8 bits (164), Expect = 2e-09
 Identities = 32/89 (35%), Positives = 56/89 (62%), Gaps = 1/89 (1%)
 Frame = -1

Query: 610 VQVENGTQGLLQYQPYPNPFTTPSKHY-HCIYYIWLKKKKGFIRKEAQ*FDIIETLKKFK 434
           +++E  T G+LQ  PYP+ +  PS+   HC +++ L +K+G   +E Q FDI  T+++F+
Sbjct: 395 LKIERDTYGMLQCHPYPHEYADPSRQSAHCAFFMGLSRKEGVKIQEGQQFDIRGTVEEFR 454

Query: 433 SIVNGYVSKKYGKKISVEYLARKDISEYV 347
             +N Y+  K G +++V ++ RK I  YV
Sbjct: 455 HEINSYMFWKPGMELAVSHVRRKQIPAYV 483


>ref|XP_003620365.1| Poly(A) polymerase [Medicago truncatula]
           gi|355495380|gb|AES76583.1| Poly(A) polymerase [Medicago
           truncatula]
          Length = 752

 Score = 67.8 bits (164), Expect = 2e-09
 Identities = 31/88 (35%), Positives = 55/88 (62%)
 Frame = -1

Query: 610 VQVENGTQGLLQYQPYPNPFTTPSKHYHCIYYIWLKKKKGFIRKEAQ*FDIIETLKKFKS 431
           +++E  T G+LQ  PYP  F+  S+ +H  Y++ L++K+G    E + FDI +T+++FK 
Sbjct: 400 LKIEKYTYGMLQCHPYPGEFSDKSRSFHQCYFMGLQRKQGVPVSEGEQFDIRQTVEEFKH 459

Query: 430 IVNGYVSKKYGKKISVEYLARKDISEYV 347
            VN Y + K G  I V ++ R++I  ++
Sbjct: 460 NVNAYTAWKPGMDIRVSHVKRRNIPNFI 487


>ref|XP_003631046.1| Poly(A) polymerase [Medicago truncatula]
           gi|355525068|gb|AET05522.1| Poly(A) polymerase [Medicago
           truncatula]
          Length = 822

 Score = 67.4 bits (163), Expect = 3e-09
 Identities = 31/88 (35%), Positives = 53/88 (60%)
 Frame = -1

Query: 610 VQVENGTQGLLQYQPYPNPFTTPSKHYHCIYYIWLKKKKGFIRKEAQ*FDIIETLKKFKS 431
           +++E  T G+LQ  P+P  F+  S+  HC Y++ L++K+G    E   FD+  T+++FK 
Sbjct: 430 LKIERNTYGMLQCHPHPGDFSDKSRPLHCSYFMGLQRKQGVPANEGGQFDMRLTVEEFKH 489

Query: 430 IVNGYVSKKYGKKISVEYLARKDISEYV 347
            VN Y   K G  IS+ ++ R++I  +V
Sbjct: 490 SVNAYTQWKPGMNISISHVKRRNIPAFV 517


>ref|XP_006853732.1| hypothetical protein AMTR_s00056p00170310 [Amborella trichopoda]
           gi|548857393|gb|ERN15199.1| hypothetical protein
           AMTR_s00056p00170310 [Amborella trichopoda]
          Length = 683

 Score = 66.6 bits (161), Expect = 5e-09
 Identities = 34/89 (38%), Positives = 53/89 (59%), Gaps = 1/89 (1%)
 Frame = -1

Query: 610 VQVENGTQGLLQYQPYPNPFTTPSKHY-HCIYYIWLKKKKGFIRKEAQ*FDIIETLKKFK 434
           +++E  T G LQ  PYPN +   SK   HC +++ L++K+G   +E Q FDI  T+ +F+
Sbjct: 388 LKIERDTLGKLQCHPYPNEYVDKSKQCAHCAFFMGLQRKQGVHVQEGQQFDIRATVDEFR 447

Query: 433 SIVNGYVSKKYGKKISVEYLARKDISEYV 347
             VN Y+ ++ G  I V ++ RK I  YV
Sbjct: 448 QSVNMYMFRRRGMDIRVSHVRRKQIPSYV 476


>ref|XP_002524874.1| Poly(A) polymerase alpha, putative [Ricinus communis]
           gi|223535837|gb|EEF37498.1| Poly(A) polymerase alpha,
           putative [Ricinus communis]
          Length = 770

 Score = 66.6 bits (161), Expect = 5e-09
 Identities = 33/88 (37%), Positives = 54/88 (61%)
 Frame = -1

Query: 610 VQVENGTQGLLQYQPYPNPFTTPSKHYHCIYYIWLKKKKGFIRKEAQ*FDIIETLKKFKS 431
           +++E  T  +LQ  P+P  FT  S+  HC Y++ L++K+G    E + FDI  T+++FK 
Sbjct: 402 LKIERHTFNMLQCHPHPGEFTDKSRPLHCSYFMGLQRKQGVPANEGEQFDIRITVEEFKI 461

Query: 430 IVNGYVSKKYGKKISVEYLARKDISEYV 347
            VN Y S K G +I V ++ R++I  +V
Sbjct: 462 SVNMYTSWKPGMEIHVTHVKRRNIPSFV 489


>gb|ABR18412.1| unknown [Picea sitchensis]
          Length = 712

 Score = 66.6 bits (161), Expect = 5e-09
 Identities = 30/88 (34%), Positives = 56/88 (63%)
 Frame = -1

Query: 610 VQVENGTQGLLQYQPYPNPFTTPSKHYHCIYYIWLKKKKGFIRKEAQ*FDIIETLKKFKS 431
           +++E  T G+LQ  P+P+ F+ P + YHC +++ L++K+G   +E + FDI  T+ +F+ 
Sbjct: 400 LKIERQTFGMLQCHPHPDDFSDPQRPYHCCFFMGLQRKQGMPIQEGEQFDIRVTVDEFRH 459

Query: 430 IVNGYVSKKYGKKISVEYLARKDISEYV 347
            V  Y   K G +I+V ++ R++I  +V
Sbjct: 460 SVKMYTLWKQGMEINVSHIRRRNIPLFV 487


>ref|XP_002308592.2| hypothetical protein POPTR_0006s25200g [Populus trichocarpa]
           gi|550337050|gb|EEE92115.2| hypothetical protein
           POPTR_0006s25200g [Populus trichocarpa]
          Length = 652

 Score = 66.2 bits (160), Expect = 7e-09
 Identities = 32/89 (35%), Positives = 54/89 (60%), Gaps = 1/89 (1%)
 Frame = -1

Query: 610 VQVENGTQGLLQYQPYPNPFTTPSKHY-HCIYYIWLKKKKGFIRKEAQ*FDIIETLKKFK 434
           +++E  T G+LQ  PYPN +  PSK   HC +++ L++K+G   +E Q FDI  T+ +F+
Sbjct: 263 LKIERDTDGMLQCHPYPNEYIDPSKQCAHCAFFMGLQRKEGVTGQEGQQFDIRGTVDEFR 322

Query: 433 SIVNGYVSKKYGKKISVEYLARKDISEYV 347
             +N Y+  K G  I V ++ R+ +  +V
Sbjct: 323 QDINMYLPWKPGMDIYVSHVRRRQLPGFV 351


>gb|EXC25192.1| Poly(A) polymerase [Morus notabilis]
          Length = 838

 Score = 65.5 bits (158), Expect = 1e-08
 Identities = 33/88 (37%), Positives = 54/88 (61%)
 Frame = -1

Query: 610 VQVENGTQGLLQYQPYPNPFTTPSKHYHCIYYIWLKKKKGFIRKEAQ*FDIIETLKKFKS 431
           +++E  T   LQ  P+P  F+  SK +HC Y++ L++K+G    E+  FDI  T+++FK+
Sbjct: 425 LKIERHTYNKLQCHPHPGEFSDKSKPFHCSYFMGLQRKQGVPANESGHFDIRLTVEEFKN 484

Query: 430 IVNGYVSKKYGKKISVEYLARKDISEYV 347
            VN Y+  K G  I V ++ RK+I  +V
Sbjct: 485 SVNMYMLWKPGMLIHVSHVKRKNIPNFV 512


>ref|XP_006855783.1| hypothetical protein AMTR_s00044p00207970 [Amborella trichopoda]
           gi|548859570|gb|ERN17250.1| hypothetical protein
           AMTR_s00044p00207970 [Amborella trichopoda]
          Length = 649

 Score = 65.5 bits (158), Expect = 1e-08
 Identities = 31/88 (35%), Positives = 53/88 (60%)
 Frame = -1

Query: 610 VQVENGTQGLLQYQPYPNPFTTPSKHYHCIYYIWLKKKKGFIRKEAQ*FDIIETLKKFKS 431
           +++E  T  +LQ  P+PN F+  S+ +HC Y++ L++KKG    E + FDI  T+++FK 
Sbjct: 392 LKIERDTFRMLQCHPHPNDFSDKSRTFHCCYFMGLQRKKGVPILEGEQFDIRATVEEFKH 451

Query: 430 IVNGYVSKKYGKKISVEYLARKDISEYV 347
            V  Y   K G  I V ++ R+++  +V
Sbjct: 452 SVGMYTLWKPGMDIQVSHIRRRNVPHFV 479


>gb|EOY04559.1| Poly(A) polymerase 1 [Theobroma cacao]
          Length = 788

 Score = 65.5 bits (158), Expect = 1e-08
 Identities = 34/89 (38%), Positives = 54/89 (60%), Gaps = 1/89 (1%)
 Frame = -1

Query: 610 VQVENGTQGLLQYQPYPNPFTTPSK-HYHCIYYIWLKKKKGFIRKEAQ*FDIIETLKKFK 434
           + +E  T G LQ  PYP+ +   SK   HC +++ L++K+G I +E Q FDI  ++ +F+
Sbjct: 397 LMIERDTYGKLQCHPYPHEYVDTSKSRAHCAFFMGLQRKQGEIVQEGQPFDIRGSIDEFR 456

Query: 433 SIVNGYVSKKYGKKISVEYLARKDISEYV 347
             V+ Y+  K G +ISV Y+ RK +  YV
Sbjct: 457 HSVSKYMFWKPGMEISVSYVRRKQLPAYV 485


>gb|EMJ11541.1| hypothetical protein PRUPE_ppa001856mg [Prunus persica]
          Length = 755

 Score = 65.5 bits (158), Expect = 1e-08
 Identities = 33/98 (33%), Positives = 58/98 (59%)
 Frame = -1

Query: 610 VQVENGTQGLLQYQPYPNPFTTPSKHYHCIYYIWLKKKKGFIRKEAQ*FDIIETLKKFKS 431
           +++E  T G+LQ  P+P  F+  S+ +H  Y++ L++K+G    E + FDI  T+++FK 
Sbjct: 399 LKIERHTYGMLQCHPHPGDFSDKSRPFHSSYFMGLQRKQGVPVTEGEQFDIRATVEEFKQ 458

Query: 430 IVNGYVSKKYGKKISVEYLARKDISEYVLEAENVVLKL 317
            VN Y   + G +I V ++ R++I  +V   E   L+L
Sbjct: 459 SVNLYTLLERGMEIRVSHVKRRNIPNFVFPGEVRPLRL 496


>gb|AFW76503.1| hypothetical protein ZEAMMB73_102594 [Zea mays]
           gi|413943855|gb|AFW76504.1| hypothetical protein
           ZEAMMB73_102594 [Zea mays]
          Length = 686

 Score = 65.5 bits (158), Expect = 1e-08
 Identities = 31/89 (34%), Positives = 55/89 (61%), Gaps = 1/89 (1%)
 Frame = -1

Query: 610 VQVENGTQGLLQYQPYPNPFTTPSKHY-HCIYYIWLKKKKGFIRKEAQ*FDIIETLKKFK 434
           +++E  T G+LQ  PYP+ +  PS+   HC +++ L +K+G   +E Q FDI  T+ +F+
Sbjct: 395 LKIERDTYGMLQCHPYPHEYADPSRQCAHCAFFMGLSRKEGVKIQEGQQFDIRGTVDEFR 454

Query: 433 SIVNGYVSKKYGKKISVEYLARKDISEYV 347
             +N Y+  K G +++V ++ RK +  YV
Sbjct: 455 HEINMYMFWKPGMELAVSHVRRKQVPAYV 483


>gb|AFW76502.1| hypothetical protein ZEAMMB73_102594 [Zea mays]
          Length = 696

 Score = 65.5 bits (158), Expect = 1e-08
 Identities = 31/89 (34%), Positives = 55/89 (61%), Gaps = 1/89 (1%)
 Frame = -1

Query: 610 VQVENGTQGLLQYQPYPNPFTTPSKHY-HCIYYIWLKKKKGFIRKEAQ*FDIIETLKKFK 434
           +++E  T G+LQ  PYP+ +  PS+   HC +++ L +K+G   +E Q FDI  T+ +F+
Sbjct: 395 LKIERDTYGMLQCHPYPHEYADPSRQCAHCAFFMGLSRKEGVKIQEGQQFDIRGTVDEFR 454

Query: 433 SIVNGYVSKKYGKKISVEYLARKDISEYV 347
             +N Y+  K G +++V ++ RK +  YV
Sbjct: 455 HEINMYMFWKPGMELAVSHVRRKQVPAYV 483


>gb|AFW76500.1| hypothetical protein ZEAMMB73_102594 [Zea mays]
           gi|413943852|gb|AFW76501.1| hypothetical protein
           ZEAMMB73_102594 [Zea mays]
          Length = 702

 Score = 65.5 bits (158), Expect = 1e-08
 Identities = 31/89 (34%), Positives = 55/89 (61%), Gaps = 1/89 (1%)
 Frame = -1

Query: 610 VQVENGTQGLLQYQPYPNPFTTPSKHY-HCIYYIWLKKKKGFIRKEAQ*FDIIETLKKFK 434
           +++E  T G+LQ  PYP+ +  PS+   HC +++ L +K+G   +E Q FDI  T+ +F+
Sbjct: 395 LKIERDTYGMLQCHPYPHEYADPSRQCAHCAFFMGLSRKEGVKIQEGQQFDIRGTVDEFR 454

Query: 433 SIVNGYVSKKYGKKISVEYLARKDISEYV 347
             +N Y+  K G +++V ++ RK +  YV
Sbjct: 455 HEINMYMFWKPGMELAVSHVRRKQVPAYV 483


>ref|XP_002892977.1| nucleotidyltransferase family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297338819|gb|EFH69236.1|
           nucleotidyltransferase family protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 716

 Score = 65.5 bits (158), Expect = 1e-08
 Identities = 31/88 (35%), Positives = 52/88 (59%)
 Frame = -1

Query: 610 VQVENGTQGLLQYQPYPNPFTTPSKHYHCIYYIWLKKKKGFIRKEAQ*FDIIETLKKFKS 431
           +++E  T  +LQ  P+P+ F   S+  HC Y++ L++K+G    E + FDI  T+++FK 
Sbjct: 395 LKIERHTYDMLQCHPHPHDFQDASRPLHCSYFMGLQRKQGVPAAEGEQFDIRRTVEEFKH 454

Query: 430 IVNGYVSKKYGKKISVEYLARKDISEYV 347
            VN Y     G +ISV ++ R+ +  YV
Sbjct: 455 TVNAYTLWIPGMEISVSHIKRRSLPNYV 482


>gb|ACR37948.1| unknown [Zea mays]
          Length = 428

 Score = 65.5 bits (158), Expect = 1e-08
 Identities = 31/89 (34%), Positives = 55/89 (61%), Gaps = 1/89 (1%)
 Frame = -1

Query: 610 VQVENGTQGLLQYQPYPNPFTTPSKHY-HCIYYIWLKKKKGFIRKEAQ*FDIIETLKKFK 434
           +++E  T G+LQ  PYP+ +  PS+   HC +++ L +K+G   +E Q FDI  T+ +F+
Sbjct: 137 LKIERDTYGMLQCHPYPHEYADPSRQCAHCAFFMGLSRKEGVKIQEGQQFDIRGTVDEFR 196

Query: 433 SIVNGYVSKKYGKKISVEYLARKDISEYV 347
             +N Y+  K G +++V ++ RK +  YV
Sbjct: 197 HEINMYMFWKPGMELAVSHVRRKQVPAYV 225


>ref|NP_001168358.1| hypothetical protein [Zea mays] gi|223947741|gb|ACN27954.1| unknown
           [Zea mays] gi|413943856|gb|AFW76505.1| hypothetical
           protein ZEAMMB73_102594 [Zea mays]
          Length = 694

 Score = 65.5 bits (158), Expect = 1e-08
 Identities = 31/89 (34%), Positives = 55/89 (61%), Gaps = 1/89 (1%)
 Frame = -1

Query: 610 VQVENGTQGLLQYQPYPNPFTTPSKHY-HCIYYIWLKKKKGFIRKEAQ*FDIIETLKKFK 434
           +++E  T G+LQ  PYP+ +  PS+   HC +++ L +K+G   +E Q FDI  T+ +F+
Sbjct: 395 LKIERDTYGMLQCHPYPHEYADPSRQCAHCAFFMGLSRKEGVKIQEGQQFDIRGTVDEFR 454

Query: 433 SIVNGYVSKKYGKKISVEYLARKDISEYV 347
             +N Y+  K G +++V ++ RK +  YV
Sbjct: 455 HEINMYMFWKPGMELAVSHVRRKQVPAYV 483


>ref|XP_006493032.1| PREDICTED: poly(A) polymerase-like isoform X3 [Citrus sinensis]
          Length = 712

 Score = 65.1 bits (157), Expect = 2e-08
 Identities = 31/88 (35%), Positives = 55/88 (62%)
 Frame = -1

Query: 610 VQVENGTQGLLQYQPYPNPFTTPSKHYHCIYYIWLKKKKGFIRKEAQ*FDIIETLKKFKS 431
           +++E  T  +LQ  P+P  F+  SK  +C Y++ L++K+G    E + FDI  T+K+FK 
Sbjct: 359 LKIERHTYNMLQCHPHPGDFSDKSKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQ 418

Query: 430 IVNGYVSKKYGKKISVEYLARKDISEYV 347
            V+ Y  +K G +ISV ++ R+++  +V
Sbjct: 419 AVSMYTLRKPGMQISVAHVTRRNLPNFV 446


>ref|XP_006493030.1| PREDICTED: poly(A) polymerase-like isoform X1 [Citrus sinensis]
          Length = 748

 Score = 65.1 bits (157), Expect = 2e-08
 Identities = 31/88 (35%), Positives = 55/88 (62%)
 Frame = -1

Query: 610 VQVENGTQGLLQYQPYPNPFTTPSKHYHCIYYIWLKKKKGFIRKEAQ*FDIIETLKKFKS 431
           +++E  T  +LQ  P+P  F+  SK  +C Y++ L++K+G    E + FDI  T+K+FK 
Sbjct: 395 LKIERHTYNMLQCHPHPGDFSDKSKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQ 454

Query: 430 IVNGYVSKKYGKKISVEYLARKDISEYV 347
            V+ Y  +K G +ISV ++ R+++  +V
Sbjct: 455 AVSMYTLRKPGMQISVAHVTRRNLPNFV 482


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