BLASTX nr result

ID: Ephedra28_contig00029479 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00029479
         (757 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002969717.1| hypothetical protein SELMODRAFT_440912 [Sela...   146   6e-33
ref|XP_002981322.1| hypothetical protein SELMODRAFT_420896 [Sela...   146   8e-33

>ref|XP_002969717.1| hypothetical protein SELMODRAFT_440912 [Selaginella moellendorffii]
            gi|300162228|gb|EFJ28841.1| hypothetical protein
            SELMODRAFT_440912 [Selaginella moellendorffii]
          Length = 2355

 Score =  146 bits (369), Expect = 6e-33
 Identities = 79/224 (35%), Positives = 125/224 (55%), Gaps = 1/224 (0%)
 Frame = -3

Query: 755  VIWALQALPNLYTAWKTVCVSISGS-TNHIELKLMLWGNDDVGLKDLIALISHWNEQNRM 579
            VIWA  AL +LY  W+ + +   G+  +  E K  +WG  + G+K L+ L+ HW  QNR+
Sbjct: 1232 VIWACHALVSLYLTWENLHLFKPGTEVDREEYKAKIWGEGEAGVKQLVDLVVHWTSQNRL 1291

Query: 578  DIIILALHSLYCACISVATANEIECNFGFQKFGMQVLVAILQKSLCHNVGIKQRRKLLHL 399
            D+  LALH+LY AC+S AT  EIE  F     G + ++  +QK+L      + RRK++  
Sbjct: 1292 DVTSLALHALYGACVSAATVKEIEAVFDLGCPGAEAVLGAMQKALLSG-SAQHRRKVVQQ 1350

Query: 398  SFHVLRAVCSYSVNSQFSFATSGGADFVVAALVRFYDDEQVYASGLKALGIDYHLKSDFS 219
            +  VL  VC  SV +Q + +  GGAD ++  L R+ +D Q+  +GL ALGID H + DF 
Sbjct: 1351 ACCVLATVCGCSVRAQVAVSAHGGADLILTVLDRYNEDSQIQVNGLHALGIDSHGQPDFD 1410

Query: 218  TTLDTAIKRNMTSIGGXXXXXXXXXSNACNVMIGFTHVFKEFIS 87
               ++AI +   ++           + A   ++G TH+F+E ++
Sbjct: 1411 AIWNSAISK---TVPAGKSNRRRRNNQASASIVGLTHIFREGVN 1451


>ref|XP_002981322.1| hypothetical protein SELMODRAFT_420896 [Selaginella moellendorffii]
            gi|300150862|gb|EFJ17510.1| hypothetical protein
            SELMODRAFT_420896 [Selaginella moellendorffii]
          Length = 2359

 Score =  146 bits (368), Expect = 8e-33
 Identities = 79/224 (35%), Positives = 125/224 (55%), Gaps = 1/224 (0%)
 Frame = -3

Query: 755  VIWALQALPNLYTAWKTVCVSISGS-TNHIELKLMLWGNDDVGLKDLIALISHWNEQNRM 579
            VIWA  AL +LY  W+ + +   G+  +  E K  +WG  + G+K L+ L+ HW  QNR+
Sbjct: 1232 VIWACHALVSLYLTWENLHLFKPGTEVDREEYKAKIWGEGEAGVKQLVDLVVHWTSQNRL 1291

Query: 578  DIIILALHSLYCACISVATANEIECNFGFQKFGMQVLVAILQKSLCHNVGIKQRRKLLHL 399
            D+  LALH+LY AC+S AT  EIE  F     G + ++  +QK+L      + RRK++  
Sbjct: 1292 DVTSLALHALYGACVSAATVKEIETVFDLGCPGAEAVLGAMQKALLSG-SAQHRRKVVQQ 1350

Query: 398  SFHVLRAVCSYSVNSQFSFATSGGADFVVAALVRFYDDEQVYASGLKALGIDYHLKSDFS 219
            +  VL  VC  SV +Q + +  GGAD ++  L R+ +D Q+  +GL ALGID H + DF 
Sbjct: 1351 ACCVLATVCGCSVRAQVAVSAHGGADLILTVLDRYNEDSQIQVNGLHALGIDSHGQPDFD 1410

Query: 218  TTLDTAIKRNMTSIGGXXXXXXXXXSNACNVMIGFTHVFKEFIS 87
               ++AI +   ++           + A   ++G TH+F+E ++
Sbjct: 1411 AIWNSAISK---TVPAGKSNRRRRNNQASASIVGLTHIFREGVN 1451


Top