BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00029410
         (475 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EOY22621.1| Pentatricopeptide repeat superfamily protein, put...    70   2e-10
ref|XP_006447818.1| hypothetical protein CICLE_v10014235mg [Citr...    67   2e-09
ref|XP_003573680.1| PREDICTED: pentatricopeptide repeat-containi...    67   3e-09
ref|XP_002461038.1| hypothetical protein SORBIDRAFT_02g039560 [S...    67   3e-09
ref|XP_004244115.1| PREDICTED: pentatricopeptide repeat-containi...    66   4e-09
ref|XP_002316516.1| hypothetical protein POPTR_0010s24080g [Popu...    66   4e-09
ref|XP_004979666.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...    66   5e-09
ref|XP_002985098.1| hypothetical protein SELMODRAFT_121399 [Sela...    66   5e-09
ref|XP_004299932.1| PREDICTED: putative pentatricopeptide repeat...    65   9e-09
ref|XP_004163108.1| PREDICTED: pentatricopeptide repeat-containi...    65   9e-09
ref|XP_004143696.1| PREDICTED: pentatricopeptide repeat-containi...    65   9e-09
ref|XP_006469440.1| PREDICTED: pentatricopeptide repeat-containi...    65   1e-08
ref|XP_002309701.2| hypothetical protein POPTR_0006s28610g [Popu...    64   2e-08
ref|NP_188293.2| pentatricopeptide repeat-containing protein [Ar...    64   3e-08
tpg|DAA41488.1| TPA: hypothetical protein ZEAMMB73_494908 [Zea m...    64   3e-08
ref|XP_003575878.1| PREDICTED: pentatricopeptide repeat-containi...    64   3e-08
ref|XP_002436496.1| hypothetical protein SORBIDRAFT_10g003720 [S...    64   3e-08
ref|XP_002320961.2| hypothetical protein POPTR_0014s11290g [Popu...    63   3e-08
ref|XP_004305082.1| PREDICTED: pentatricopeptide repeat-containi...    63   3e-08
gb|AAF75798.1|AC011000_1 Contains multiple PPR Repeats PF|01535 ...    63   3e-08

>gb|EOY22621.1| Pentatricopeptide repeat superfamily protein, putative isoform 1
           [Theobroma cacao] gi|508775366|gb|EOY22622.1|
           Pentatricopeptide repeat superfamily protein, putative
           isoform 1 [Theobroma cacao]
          Length = 1021

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 41/157 (26%), Positives = 69/157 (43%)
 Frame = -3

Query: 473 VLESLEDKSVVPLSTNWCEVFVRGLCLMEEGSRAYSVLSSILKTCSRDNVASLTIVVGAF 294
           +L+ + +K V+P     C   + GLC  ++   A S L  ++    + N  +    +  +
Sbjct: 487 ILDRMMEKGVLP-DVICCNTLISGLCKAQKMDEARSCLVEMVDRGLKPNAHTYGAFIHGY 545

Query: 293 CKCGEVLMAERVVTDSVSWGLVPDGRIFSHLISGYCKVNMVVEAQSTFKRMKKSGFIPEK 114
            K GE+   ER   +  ++G+ P+  I+S LI+ +CK   V EA ST + M + G +P+ 
Sbjct: 546 AKAGEIEAVERCFKEMQNYGIAPNNVIYSELINSHCKAGNVTEALSTLRCMSEQGVVPDV 605

Query: 113 SDYDKLLKXXXXXXXXXXXXXXXXXXXLHGITPDVGT 3
             Y  L+                      GI PDV T
Sbjct: 606 KTYTVLIHGLATNGRINDARDVFSQLHGKGIVPDVFT 642


>ref|XP_006447818.1| hypothetical protein CICLE_v10014235mg [Citrus clementina]
           gi|557550429|gb|ESR61058.1| hypothetical protein
           CICLE_v10014235mg [Citrus clementina]
          Length = 864

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 38/134 (28%), Positives = 59/134 (44%)
 Frame = -3

Query: 404 GLCLMEEGSRAYSVLSSILKTCSRDNVASLTIVVGAFCKCGEVLMAERVVTDSVSWGLVP 225
           GLC  +    A   L  +L+   + N+ S    +  +C  GE+  A R   + ++ GLVP
Sbjct: 425 GLCKAKRMDEARIYLVEMLRRGLKPNIHSFRAFILGYCMAGEMQTAGRFFNEMLNSGLVP 484

Query: 224 DGRIFSHLISGYCKVNMVVEAQSTFKRMKKSGFIPEKSDYDKLLKXXXXXXXXXXXXXXX 45
           +  I++ ++ GYCK   + EA STF+ M   G +PE   Y  L+                
Sbjct: 485 NDVIYTSIVDGYCKEGNIAEAISTFRCMLARGILPEVQTYSVLINGLSKKLELREALGIF 544

Query: 44  XXXXLHGITPDVGT 3
                 G+ PDV T
Sbjct: 545 LELLEKGLVPDVDT 558



 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 31/127 (24%), Positives = 66/127 (51%)
 Frame = -3

Query: 473 VLESLEDKSVVPLSTNWCEVFVRGLCLMEEGSRAYSVLSSILKTCSRDNVASLTIVVGAF 294
           VL  +    + P S  +  + ++G C M +   A+ +L  + K     +V +  +++   
Sbjct: 298 VLNEIIRMGIEPNSRTYTSL-IQGYCRMRKMVSAFELLDEMKKKNLVPSVFTYGVIIDGL 356

Query: 293 CKCGEVLMAERVVTDSVSWGLVPDGRIFSHLISGYCKVNMVVEAQSTFKRMKKSGFIPEK 114
           C CG++     ++ + ++ GL P+  I+++L+S Y K N + EA    +RM++ G  P+ 
Sbjct: 357 CHCGDLRQINAILGEMITRGLKPNAIIYTNLVSTYFKKNKLQEAGKLVERMRREGITPDV 416

Query: 113 SDYDKLL 93
           S ++ L+
Sbjct: 417 SCFNSLI 423


>ref|XP_003573680.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Brachypodium distachyon]
          Length = 739

 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 44/158 (27%), Positives = 66/158 (41%), Gaps = 1/158 (0%)
 Frame = -3

Query: 473 VLESLEDKSVVPLSTNW-CEVFVRGLCLMEEGSRAYSVLSSILKTCSRDNVASLTIVVGA 297
           +L+S+E+  +VP    W C V +  LC  E    A  +L S+++   + N    T ++  
Sbjct: 304 LLQSMENSGLVP--NEWTCSVLIDALCKHERVGEAQLLLGSLIQKGIKVNEIVYTSLIDG 361

Query: 296 FCKCGEVLMAERVVTDSVSWGLVPDGRIFSHLISGYCKVNMVVEAQSTFKRMKKSGFIPE 117
            CK G    A+R++   VS G VPD   +S LI G C+   + EA      M + G  P 
Sbjct: 362 LCKAGRFAAADRLMQTLVSQGFVPDAHTYSSLIDGLCRQKELSEAMLVLDDMMEKGVQPS 421

Query: 116 KSDYDKLLKXXXXXXXXXXXXXXXXXXXLHGITPDVGT 3
              Y  ++                      GI PDV T
Sbjct: 422 PVTYTIIIDELVREVGADGSKKILDKMIAAGIKPDVFT 459


>ref|XP_002461038.1| hypothetical protein SORBIDRAFT_02g039560 [Sorghum bicolor]
           gi|241924415|gb|EER97559.1| hypothetical protein
           SORBIDRAFT_02g039560 [Sorghum bicolor]
          Length = 595

 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 34/104 (32%), Positives = 59/104 (56%)
 Frame = -3

Query: 401 LCLMEEGSRAYSVLSSILKTCSRDNVASLTIVVGAFCKCGEVLMAERVVTDSVSWGLVPD 222
           +C      RA  + + + K C  D +A  T++ GA CK G++   ++++ D +  GL PD
Sbjct: 450 MCQQGMMERAMGLFNEMDKNCGLDAIAYSTMIHGA-CKSGDMKTVKQLIQDMLDEGLAPD 508

Query: 221 GRIFSHLISGYCKVNMVVEAQSTFKRMKKSGFIPEKSDYDKLLK 90
              +S LI+ Y K+  + EA+   K+M  SGF+P+ + +D L+K
Sbjct: 509 AVTYSMLINMYAKLGDLEEAERVLKQMTASGFVPDVAVFDSLIK 552


>ref|XP_004244115.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g28010-like [Solanum lycopersicum]
          Length = 737

 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 35/125 (28%), Positives = 69/125 (55%), Gaps = 2/125 (1%)
 Frame = -3

Query: 461 LEDKSVVPLSTNWCEVFVRGLCLMEEGS--RAYSVLSSILKTCSRDNVASLTIVVGAFCK 288
           L+D++ V        V +RGLC  +EGS  +A  + + +++  S  ++ + ++++GA+ K
Sbjct: 424 LDDETYVQPDVITMNVLIRGLC--QEGSLDKAGEIHNKMVENKSLVDIGTFSVLIGAYIK 481

Query: 287 CGEVLMAERVVTDSVSWGLVPDGRIFSHLISGYCKVNMVVEAQSTFKRMKKSGFIPEKSD 108
            G+++ A  +        L+PD   +S +I G+CK+  +  A+  F R +K G+ P   D
Sbjct: 482 AGDIVKAFELWKQLTQLNLIPDSMTYSTIIDGFCKLCALNIAKGLFLRFRKKGYHPTAFD 541

Query: 107 YDKLL 93
           Y+ L+
Sbjct: 542 YNSLM 546


>ref|XP_002316516.1| hypothetical protein POPTR_0010s24080g [Populus trichocarpa]
           gi|566192485|ref|XP_006378798.1| pentatricopeptide
           repeat-containing family protein [Populus trichocarpa]
           gi|222865556|gb|EEF02687.1| hypothetical protein
           POPTR_0010s24080g [Populus trichocarpa]
           gi|550330488|gb|ERP56595.1| pentatricopeptide
           repeat-containing family protein [Populus trichocarpa]
          Length = 761

 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 34/108 (31%), Positives = 59/108 (54%)
 Frame = -3

Query: 416 VFVRGLCLMEEGSRAYSVLSSILKTCSRDNVASLTIVVGAFCKCGEVLMAERVVTDSVSW 237
           +F++GLC     S A S+L S+++     +V +   ++   CK   V+ AE+ +   V+ 
Sbjct: 256 IFIQGLCRKGMLSGAMSMLDSVIREGLTPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNG 315

Query: 236 GLVPDGRIFSHLISGYCKVNMVVEAQSTFKRMKKSGFIPEKSDYDKLL 93
           GL PDG  ++ LI GYCK+ M+  A+   +     GF+P++  Y  L+
Sbjct: 316 GLEPDGFTYNTLIDGYCKMGMLQNAEKILQGAICKGFVPDEFTYCSLI 363


>ref|XP_004979666.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g19890-like [Setaria italica]
          Length = 679

 Score = 65.9 bits (159), Expect = 5e-09
 Identities = 38/128 (29%), Positives = 68/128 (53%), Gaps = 1/128 (0%)
 Frame = -3

Query: 473 VLESLEDKSVVPLSTNWCEVFVRGLCLMEEGSRAYSVLSSILKTCS-RDNVASLTIVVGA 297
           VLE +  K + P       + + GLC +    RA+ +   ++K+ S + NV + T+++G 
Sbjct: 276 VLEEMVRKGLKPNVYTHTSL-IHGLCKIGWTERAFRLFLKLVKSSSYKPNVHTYTVMIGG 334

Query: 296 FCKCGEVLMAERVVTDSVSWGLVPDGRIFSHLISGYCKVNMVVEAQSTFKRMKKSGFIPE 117
           +CK G++  AE ++   V  GLVP+   ++ LI G+CK      A     +MK+ GF+P 
Sbjct: 335 YCKEGKLARAEMLLGRMVEQGLVPNTNTYTTLIDGHCKGGSFDRAFELMNKMKQEGFLPN 394

Query: 116 KSDYDKLL 93
              Y+ ++
Sbjct: 395 IYTYNAIV 402


>ref|XP_002985098.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
           gi|300147308|gb|EFJ13973.1| hypothetical protein
           SELMODRAFT_121399 [Selaginella moellendorffii]
          Length = 659

 Score = 65.9 bits (159), Expect = 5e-09
 Identities = 41/157 (26%), Positives = 70/157 (44%)
 Frame = -3

Query: 473 VLESLEDKSVVPLSTNWCEVFVRGLCLMEEGSRAYSVLSSILKTCSRDNVASLTIVVGAF 294
           V++ +  +   P S+++  + + GLC +E G  A  +L  + +     N+ + +I++   
Sbjct: 493 VMDLMTKQGCPPTSSHYA-LIIGGLCDVERGDEALKMLQVMSERGCEPNLYTYSILINGL 551

Query: 293 CKCGEVLMAERVVTDSVSWGLVPDGRIFSHLISGYCKVNMVVEAQSTFKRMKKSGFIPEK 114
           CK   V  A  V+   +  G VPD   ++ LI G+CK+N +  A   FK M+ SG  P+K
Sbjct: 552 CKTKRVEDAINVLDVMLEKGCVPDVATYTSLIDGFCKINKMDAAYQCFKTMRDSGCEPDK 611

Query: 113 SDYDKLLKXXXXXXXXXXXXXXXXXXXLHGITPDVGT 3
             Y+ L+                      G  PD  T
Sbjct: 612 LAYNILISGFCQSGNVEKAIEVMQLMLEKGCNPDAAT 648



 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 32/116 (27%), Positives = 58/116 (50%)
 Frame = -3

Query: 440 PLSTNWCEVFVRGLCLMEEGSRAYSVLSSILKTCSRDNVASLTIVVGAFCKCGEVLMAER 261
           P +  +C + + GLC  +    AY +L  +++     + A    ++   CK G++  A  
Sbjct: 90  PTAFTYC-ILIHGLCQCQRIDEAYQLLDEMIQKDCHPDAAVYNCLIAGLCKMGKIDAARN 148

Query: 260 VVTDSVSWGLVPDGRIFSHLISGYCKVNMVVEAQSTFKRMKKSGFIPEKSDYDKLL 93
           V+   +    VPD   ++ LI G C+ N + EA+   ++MK+SG  P+   Y+ LL
Sbjct: 149 VLKMMLERSCVPDVITYTSLIVGCCQTNALDEARKLMEKMKESGLTPDTVAYNALL 204


>ref|XP_004299932.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g16890, mitochondrial-like [Fragaria vesca subsp.
           vesca]
          Length = 674

 Score = 65.1 bits (157), Expect = 9e-09
 Identities = 33/107 (30%), Positives = 57/107 (53%)
 Frame = -3

Query: 410 VRGLCLMEEGSRAYSVLSSILKTCSRDNVASLTIVVGAFCKCGEVLMAERVVTDSVSWGL 231
           + GLC + +   A+   S +++     NV +  I++ + C  G++  AER++ +    G+
Sbjct: 510 IDGLCRVNQIDDAFDCFSEMVRWGITPNVITYNILLRSLCFIGDIARAERLMENMQVDGI 569

Query: 230 VPDGRIFSHLISGYCKVNMVVEAQSTFKRMKKSGFIPEKSDYDKLLK 90
            PD   FSHLI  +C++N V +A+  F  M KSG  P+   Y   +K
Sbjct: 570 KPDSYSFSHLIQSFCRMNKVEKAEEHFLVMLKSGLNPDNYTYSVFIK 616


>ref|XP_004163108.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Cucumis sativus]
          Length = 999

 Score = 65.1 bits (157), Expect = 9e-09
 Identities = 39/132 (29%), Positives = 61/132 (46%)
 Frame = -3

Query: 404 GLCLMEEGSRAYSVLSSILKTCSRDNVASLTIVVGAFCKCGEVLMAERVVTDSVSWGLVP 225
           GLC  ++   A  +L  + +   + N  +    +  + K GE+ +AER   D +S G+VP
Sbjct: 530 GLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVP 589

Query: 224 DGRIFSHLISGYCKVNMVVEAQSTFKRMKKSGFIPEKSDYDKLLKXXXXXXXXXXXXXXX 45
           +  I++ LI G+C V   VEA STFK M + G IP+   Y  ++                
Sbjct: 590 NNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVF 649

Query: 44  XXXXLHGITPDV 9
                 G+ PDV
Sbjct: 650 LKFLKTGVVPDV 661


>ref|XP_004143696.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Cucumis sativus]
          Length = 1032

 Score = 65.1 bits (157), Expect = 9e-09
 Identities = 39/132 (29%), Positives = 61/132 (46%)
 Frame = -3

Query: 404 GLCLMEEGSRAYSVLSSILKTCSRDNVASLTIVVGAFCKCGEVLMAERVVTDSVSWGLVP 225
           GLC  ++   A  +L  + +   + N  +    +  + K GE+ +AER   D +S G+VP
Sbjct: 530 GLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVP 589

Query: 224 DGRIFSHLISGYCKVNMVVEAQSTFKRMKKSGFIPEKSDYDKLLKXXXXXXXXXXXXXXX 45
           +  I++ LI G+C V   VEA STFK M + G IP+   Y  ++                
Sbjct: 590 NNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVF 649

Query: 44  XXXXLHGITPDV 9
                 G+ PDV
Sbjct: 650 LKFLKTGVVPDV 661


>ref|XP_006469440.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Citrus sinensis]
          Length = 989

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 37/134 (27%), Positives = 58/134 (43%)
 Frame = -3

Query: 404 GLCLMEEGSRAYSVLSSILKTCSRDNVASLTIVVGAFCKCGEVLMAERVVTDSVSWGLVP 225
           GLC  +    A   L  +L+   + N+ S    +  +C  GE+  A R   + ++ GLVP
Sbjct: 517 GLCKAKRMDEARIYLVEMLRRGLKPNIHSFRAFILGYCMAGEMQTAGRFFNEMLNSGLVP 576

Query: 224 DGRIFSHLISGYCKVNMVVEAQSTFKRMKKSGFIPEKSDYDKLLKXXXXXXXXXXXXXXX 45
           +  I++ ++ GYCK   + EA S F+ M   G +PE   Y  L+                
Sbjct: 577 NDVIYTSIVDGYCKEGNIAEAISKFRCMLARGILPEVQTYSVLINGLSKKLELREALGIF 636

Query: 44  XXXXLHGITPDVGT 3
                 G+ PDV T
Sbjct: 637 LELLEKGLVPDVDT 650



 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 31/127 (24%), Positives = 66/127 (51%)
 Frame = -3

Query: 473 VLESLEDKSVVPLSTNWCEVFVRGLCLMEEGSRAYSVLSSILKTCSRDNVASLTIVVGAF 294
           VL  +    + P S  +  + ++G C M +   A+ +L  + K     +V +  +++   
Sbjct: 390 VLNEIIRMGIEPNSRTYTSL-IQGYCRMRKMVSAFELLDEMKKKNLVPSVFTYGVIIDGL 448

Query: 293 CKCGEVLMAERVVTDSVSWGLVPDGRIFSHLISGYCKVNMVVEAQSTFKRMKKSGFIPEK 114
           C CG++     ++ + ++ GL P+  I+++L+S Y K N + EA    +RM++ G  P+ 
Sbjct: 449 CHCGDLRQINAILGEMITRGLKPNAIIYTNLVSTYFKKNKLQEAGKLVERMRREGITPDV 508

Query: 113 SDYDKLL 93
           S ++ L+
Sbjct: 509 SCFNSLI 515


>ref|XP_002309701.2| hypothetical protein POPTR_0006s28610g [Populus trichocarpa]
           gi|550337278|gb|EEE93224.2| hypothetical protein
           POPTR_0006s28610g [Populus trichocarpa]
          Length = 596

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 38/159 (23%), Positives = 68/159 (42%), Gaps = 2/159 (1%)
 Frame = -3

Query: 473 VLESLEDKSVVPLSTN--WCEVFVRGLCLMEEGSRAYSVLSSILKTCSRDNVASLTIVVG 300
           V+   +   +V LS N     +F+   C ++     +SVL+ ++K   +  + + T ++ 
Sbjct: 88  VISLSKQMELVGLSPNIYTLSIFMNCFCQLQRVDLGFSVLAKVIKLGLQPTIVTFTTLIN 147

Query: 299 AFCKCGEVLMAERVVTDSVSWGLVPDGRIFSHLISGYCKVNMVVEAQSTFKRMKKSGFIP 120
             CK GE   A  +  D V+ G  PD   ++ +I+G CK+     A    K+M+++G  P
Sbjct: 148 GLCKVGEFAQAVELFDDMVAKGCQPDVYTYNTIINGLCKIGETAAAAGLLKKMEEAGCQP 207

Query: 119 EKSDYDKLLKXXXXXXXXXXXXXXXXXXXLHGITPDVGT 3
               Y  L+                      GI+PD+ T
Sbjct: 208 NMVTYSTLIDSLCRDRLVNEALDIFSYMKAKGISPDIFT 246



 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 27/109 (24%), Positives = 57/109 (52%)
 Frame = -3

Query: 416 VFVRGLCLMEEGSRAYSVLSSILKTCSRDNVASLTIVVGAFCKCGEVLMAERVVTDSVSW 237
           + + G C      +A+ +  ++  T  + N+   TI+V A CK G    A ++ ++    
Sbjct: 424 ILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYTILVHAMCKSGNHKDARKLFSELFVQ 483

Query: 236 GLVPDGRIFSHLISGYCKVNMVVEAQSTFKRMKKSGFIPEKSDYDKLLK 90
           GL P  ++++ +I+G CK  ++ EA   F+ M+  G  P++  Y+ +++
Sbjct: 484 GLQPHVQLYTTIINGLCKEGLLDEALEAFRNMEADGCPPDEISYNVIIR 532


>ref|NP_188293.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75274280|sp|Q9LUR2.1|PP238_ARATH RecName:
           Full=Putative pentatricopeptide repeat-containing
           protein At3g16710, mitochondrial; Flags: Precursor
           gi|11994626|dbj|BAB02763.1| unnamed protein product
           [Arabidopsis thaliana] gi|332642334|gb|AEE75855.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 507

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 33/104 (31%), Positives = 57/104 (54%)
 Frame = -3

Query: 416 VFVRGLCLMEEGSRAYSVLSSILKTCSRDNVASLTIVVGAFCKCGEVLMAERVVTDSVSW 237
           V + GLC   +  +A  +   + K     N+ + TI++   CK G+V  A  +     S 
Sbjct: 403 VLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSK 462

Query: 236 GLVPDGRIFSHLISGYCKVNMVVEAQSTFKRMKKSGFIPEKSDY 105
           G+ P+   ++ +ISG+C+  ++ EA S FK+MK+ GF+P +S Y
Sbjct: 463 GMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESVY 506


>tpg|DAA41488.1| TPA: hypothetical protein ZEAMMB73_494908 [Zea mays]
          Length = 601

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 34/104 (32%), Positives = 60/104 (57%)
 Frame = -3

Query: 401 LCLMEEGSRAYSVLSSILKTCSRDNVASLTIVVGAFCKCGEVLMAERVVTDSVSWGLVPD 222
           LC +    +A  + + +   C  D VA  T++ GA CK G++  A++++ D +  GL PD
Sbjct: 442 LCQLGMMEQAMVLFNEMDMNCGLDAVAYSTMMYGA-CKSGDIKAAKQLLQDMLDEGLAPD 500

Query: 221 GRIFSHLISGYCKVNMVVEAQSTFKRMKKSGFIPEKSDYDKLLK 90
              +S LI+ + K+  + EA+   K+M  SGF+P+ + +D L+K
Sbjct: 501 AVTYSILINMFAKLGDLEEAERVLKQMAASGFVPDVAVFDSLIK 544


>ref|XP_003575878.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g19890-like [Brachypodium distachyon]
          Length = 676

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 38/128 (29%), Positives = 67/128 (52%), Gaps = 1/128 (0%)
 Frame = -3

Query: 473 VLESLEDKSVVPLSTNWCEVFVRGLCLMEEGSRAYSVLSSILKTCS-RDNVASLTIVVGA 297
           VLE +  K + P       + + GLC +    RA+ +   ++K+ S + NV + T+++G 
Sbjct: 277 VLEEMVAKGLKPNVYTHTSL-INGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGG 335

Query: 296 FCKCGEVLMAERVVTDSVSWGLVPDGRIFSHLISGYCKVNMVVEAQSTFKRMKKSGFIPE 117
           +CK G++  AE ++   V  GL P+   ++ LISG+CK      A     +M++ GF P 
Sbjct: 336 YCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLISGHCKEGSFNCAFELMNKMRREGFQPN 395

Query: 116 KSDYDKLL 93
              Y+ L+
Sbjct: 396 IYTYNALI 403


>ref|XP_002436496.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
           gi|241914719|gb|EER87863.1| hypothetical protein
           SORBIDRAFT_10g003720 [Sorghum bicolor]
          Length = 698

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 41/138 (29%), Positives = 58/138 (42%)
 Frame = -3

Query: 416 VFVRGLCLMEEGSRAYSVLSSILKTCSRDNVASLTIVVGAFCKCGEVLMAERVVTDSVSW 237
           + VR LC       A SVL  +       N  +   +V AFC+ GEV  AER+V      
Sbjct: 162 ILVRALCGRGHRKEALSVLRDMRGAGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMMREG 221

Query: 236 GLVPDGRIFSHLISGYCKVNMVVEAQSTFKRMKKSGFIPEKSDYDKLLKXXXXXXXXXXX 57
           GL P+   F+ +++G CK   + +A+  F  M K G  P+   Y+ L+            
Sbjct: 222 GLKPNLVTFNSVVNGICKAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEA 281

Query: 56  XXXXXXXXLHGITPDVGT 3
                     GI PDV T
Sbjct: 282 LSVFAEMTRKGIMPDVVT 299



 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 33/106 (31%), Positives = 51/106 (48%)
 Frame = -3

Query: 410 VRGLCLMEEGSRAYSVLSSILKTCSRDNVASLTIVVGAFCKCGEVLMAERVVTDSVSWGL 231
           V   C   E  RA  ++  + +   + N+ +   VV   CK G +  A +V  + V  GL
Sbjct: 199 VAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNGICKAGRMEDARKVFDEMVKEGL 258

Query: 230 VPDGRIFSHLISGYCKVNMVVEAQSTFKRMKKSGFIPEKSDYDKLL 93
            PDG  ++ L+ GYCKV    EA S F  M + G +P+   +  L+
Sbjct: 259 APDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDVVTFTSLI 304


>ref|XP_002320961.2| hypothetical protein POPTR_0014s11290g [Populus trichocarpa]
           gi|550323979|gb|EEE99276.2| hypothetical protein
           POPTR_0014s11290g [Populus trichocarpa]
          Length = 453

 Score = 63.2 bits (152), Expect = 3e-08
 Identities = 26/109 (23%), Positives = 60/109 (55%)
 Frame = -3

Query: 416 VFVRGLCLMEEGSRAYSVLSSILKTCSRDNVASLTIVVGAFCKCGEVLMAERVVTDSVSW 237
           V + GLC       A+++   + ++  + N+   TI++ + CKCG++   + + +  +  
Sbjct: 291 VLLDGLCKHGNLEEAFALFQEMQRSTVKPNLVIYTILIDSLCKCGKIKDGKELFSRLIDE 350

Query: 236 GLVPDGRIFSHLISGYCKVNMVVEAQSTFKRMKKSGFIPEKSDYDKLLK 90
           GL P+   ++ L+   CK  +++EA   F++M++ G  P+K  Y+ +++
Sbjct: 351 GLKPNVYTYTALVGALCKEGLIIEAHKLFRKMEEDGCTPDKCAYNVIIQ 399



 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 35/126 (27%), Positives = 59/126 (46%)
 Frame = -3

Query: 470 LESLEDKSVVPLSTNWCEVFVRGLCLMEEGSRAYSVLSSILKTCSRDNVASLTIVVGAFC 291
           L+ +E    VP   N+    + G CL  +   A SV   ++      NV + T ++  +C
Sbjct: 169 LKQMEKVGCVPNVVNY-STLIDGYCLRGQMDEARSVFDLMVSKGCTPNVYTYTSLMNGYC 227

Query: 290 KCGEVLMAERVVTDSVSWGLVPDGRIFSHLISGYCKVNMVVEAQSTFKRMKKSGFIPEKS 111
           K   +  A +++ +++  GLVPD   F+ +ISG C+    + AQ  F+ +   G  P   
Sbjct: 228 KIERIEEAVQLLDETLRKGLVPDIVTFTTIISGLCRAGRPLAAQQLFRYICAHGHTPNIM 287

Query: 110 DYDKLL 93
            Y  LL
Sbjct: 288 TYGVLL 293


>ref|XP_004305082.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16640,
           mitochondrial-like [Fragaria vesca subsp. vesca]
          Length = 509

 Score = 63.2 bits (152), Expect = 3e-08
 Identities = 33/106 (31%), Positives = 54/106 (50%)
 Frame = -3

Query: 410 VRGLCLMEEGSRAYSVLSSILKTCSRDNVASLTIVVGAFCKCGEVLMAERVVTDSVSWGL 231
           ++GLC +     AY +L  I K   + ++ + T V+  FCK G    A  ++ D+V  GL
Sbjct: 227 LKGLCYVGRVEDAYDMLMKIKKGVIQPDIYTYTAVMDGFCKVGRTDEAMELLNDAVELGL 286

Query: 230 VPDGRIFSHLISGYCKVNMVVEAQSTFKRMKKSGFIPEKSDYDKLL 93
           + D   F+ L  GYC+    +E  +  K+MK+   IP+   Y  L+
Sbjct: 287 ILDVVAFNTLFDGYCREGRAMEGLNVLKQMKERNCIPDYITYSTLI 332


>gb|AAF75798.1|AC011000_1 Contains multiple PPR Repeats PF|01535 [Arabidopsis thaliana]
          Length = 514

 Score = 63.2 bits (152), Expect = 3e-08
 Identities = 31/121 (25%), Positives = 59/121 (48%)
 Frame = -3

Query: 452 KSVVPLSTNWCEVFVRGLCLMEEGSRAYSVLSSILKTCSRDNVASLTIVVGAFCKCGEVL 273
           KS + L T  C + + G+C   +   A+ + +S+       +V +  I++G F K G  L
Sbjct: 294 KSKMDLDTATCNIIINGMCKGNKVDEAWDLFNSLPVNGVETDVVTYNILIGVFVKEGNFL 353

Query: 272 MAERVVTDSVSWGLVPDGRIFSHLISGYCKVNMVVEAQSTFKRMKKSGFIPEKSDYDKLL 93
            AE +  + +  G++P    ++ ++ G+CK N + EA+     M   G  P+   +  L+
Sbjct: 354 RAEDIYLEMLCKGIIPSTVTYNSMVDGFCKQNRLEEARQMVDSMVSEGCSPDVVTFSTLI 413

Query: 92  K 90
           K
Sbjct: 414 K 414