BLASTX nr result

ID: Ephedra28_contig00029375 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00029375
         (515 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331734.1| predicted protein [Populus trichocarpa]            56   6e-06
ref|XP_002333406.1| predicted protein [Populus trichocarpa]            56   6e-06
ref|XP_003590736.1| hypothetical protein MTR_1g073220 [Medicago ...    55   7e-06

>ref|XP_002331734.1| predicted protein [Populus trichocarpa]
          Length = 557

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 40/129 (31%), Positives = 61/129 (47%), Gaps = 4/129 (3%)
 Frame = -1

Query: 467 VWGPKGFSVSSVHNLTRGFFLFLQNWVPVKT-VMEKGPWFIQDILLFLSPWDKDFHVLDD 291
           +W   G  +S V +   GFF+F  ++V   T V+E+ PW + +  L L  W  +   L D
Sbjct: 152 IWSSYG--LSEVLSSDNGFFIFNFDFVDHATNVLERAPWHMANRPLVLKRWQPNMQFLKD 209

Query: 290 TVMRVPVWVEFPNLQTSLWQFG--HQIASSIGEFLLEDTEKEINIRPG-KRACIIVDITL 120
            + RVPVWV   N+    W       +AS+IG  L  D    +  R    R C+ +D + 
Sbjct: 210 DLARVPVWVRLYNVPLEYWTIKGLSCVASAIGVPLHADHTTLLRKRLSYARVCVEIDASK 269

Query: 119 SLRDSIDLK 93
           +L    DL+
Sbjct: 270 TLVKEYDLR 278


>ref|XP_002333406.1| predicted protein [Populus trichocarpa]
          Length = 1166

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 39/129 (30%), Positives = 61/129 (47%), Gaps = 4/129 (3%)
 Frame = -1

Query: 467 VWGPKGFSVSSVHNLTRGFFLFLQNWVPVKT-VMEKGPWFIQDILLFLSPWDKDFHVLDD 291
           +W   G  +S V +   GFF+F  ++V   T V+E+ PW + +  L L  W  +   L D
Sbjct: 178 IWSSYG--LSEVLSSDNGFFIFNFDYVDHATNVLERAPWHMANRPLVLKRWQPNMQFLKD 235

Query: 290 TVMRVPVWVEFPNLQTSLWQFG--HQIASSIGEFLLEDTEKEINIRPG-KRACIIVDITL 120
            + RVPVWV   N+    W       +AS++G  L  D    +  R    R C+ +D + 
Sbjct: 236 DLARVPVWVRLYNVPLEYWTIKGLSCVASAVGVPLHADHTTLLRKRLSYARVCVEIDASK 295

Query: 119 SLRDSIDLK 93
           +L    DL+
Sbjct: 296 TLVKEYDLR 304



 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 39/129 (30%), Positives = 61/129 (47%), Gaps = 4/129 (3%)
 Frame = -1

Query: 467  VWGPKGFSVSSVHNLTRGFFLFLQNWVPVKT-VMEKGPWFIQDILLFLSPWDKDFHVLDD 291
            +W   G  +S V +   GFF+F  ++V   T V+E+ PW + +  L L  W  +   L D
Sbjct: 971  IWSSYG--LSEVLSSDNGFFIFNFDYVDHATNVLERAPWHMANRPLVLKRWQPNMQFLKD 1028

Query: 290  TVMRVPVWVEFPNLQTSLWQFG--HQIASSIGEFLLEDTEKEINIRPG-KRACIIVDITL 120
             + RVPVWV   N+    W       +AS++G  L  D    +  R    R C+ +D + 
Sbjct: 1029 DLARVPVWVRLYNVPLEYWTIKGLSCVASAVGVPLHADHTTLLRKRLSYARVCVEIDASK 1088

Query: 119  SLRDSIDLK 93
            +L    DL+
Sbjct: 1089 TLVKEYDLR 1097


>ref|XP_003590736.1| hypothetical protein MTR_1g073220 [Medicago truncatula]
           gi|355479784|gb|AES60987.1| hypothetical protein
           MTR_1g073220 [Medicago truncatula]
          Length = 361

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 39/133 (29%), Positives = 61/133 (45%), Gaps = 3/133 (2%)
 Frame = -1

Query: 476 ISLVW-GPKGFSVSSVHNLTRGFFLFLQNWVPVKTVMEKGPWFIQDILLFLSPWDKDFHV 300
           +S +W  PKGF V  + +  + F  F+      K ++   PWF ++  L + PW +D   
Sbjct: 105 LSNIWCNPKGFRVEHIGD--KLFHFFMDEQEDTKRIIRGNPWFFRNSWLIVHPWRRDIDA 162

Query: 299 LDDTVMRVPVWVEFPNLQTS--LWQFGHQIASSIGEFLLEDTEKEINIRPGKRACIIVDI 126
                   P+WV+   L T     Q G +I SSIG  L      E+   P K+  +I+ I
Sbjct: 163 RSLEFRHAPIWVQLRGLPTQCRTKQMGIKIGSSIGTVL----ASELYEYPDKK--LIIKI 216

Query: 125 TLSLRDSIDLKIG 87
            ++L  S  +K G
Sbjct: 217 KVNLAVSTPIKAG 229


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