BLASTX nr result
ID: Ephedra28_contig00029353
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra28_contig00029353
(505 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN65377.1| hypothetical protein VITISV_014188 [Vitis vinifera] 70 1e-12
gb|ABR16307.1| unknown [Picea sitchensis] 65 6e-12
gb|ACN78973.1| copia-type polyprotein [Glycine max] gi|225016157... 62 1e-11
emb|CAN64779.1| hypothetical protein VITISV_043230 [Vitis vinifera] 67 5e-11
ref|XP_006590177.1| PREDICTED: uncharacterized protein LOC102669... 56 7e-11
dbj|BAB11200.1| copia-type polyprotein [Arabidopsis thaliana] gi... 62 1e-10
gb|AAG51247.1|AC055769_6 copia-type polyprotein, putative; 28768... 62 1e-10
gb|AAF25964.2|AC017118_1 F6N18.1 [Arabidopsis thaliana] 62 1e-10
emb|CAN59755.1| hypothetical protein VITISV_034567 [Vitis vinifera] 63 1e-10
emb|CAN74029.1| hypothetical protein VITISV_013540 [Vitis vinifera] 57 1e-10
emb|CAN63433.1| hypothetical protein VITISV_033829 [Vitis vinifera] 61 2e-10
gb|ABW74566.1| integrase [Boechera divaricarpa] 54 4e-10
emb|CAN79061.1| hypothetical protein VITISV_024577 [Vitis vinifera] 58 7e-10
emb|CAB75469.1| copia-type reverse transcriptase-like protein [A... 55 9e-10
emb|CAA69272.1| lectin receptor kinase [Arabidopsis thaliana] 55 9e-10
gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabi... 54 1e-09
gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabi... 53 3e-09
emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana] 53 3e-09
gb|AAD50001.1|AC007259_14 Hypothetical protein [Arabidopsis thal... 53 3e-09
emb|CAN67797.1| hypothetical protein VITISV_038915 [Vitis vinifera] 67 3e-09
>emb|CAN65377.1| hypothetical protein VITISV_014188 [Vitis vinifera]
Length = 738
Score = 70.1 bits (170), Expect(3) = 1e-12
Identities = 42/115 (36%), Positives = 61/115 (53%), Gaps = 8/115 (6%)
Frame = +1
Query: 85 QNVKEVKIQILRIDGGQEYQYLEFNEFCKYKDIRRRVAV-------SNAERKNRVIMKTT 243
+N + K+Q++R D G EY +FN+FC+ I ++ ERKNR +M+ T
Sbjct: 25 ENQSKCKMQVIRSDNGTEYTSEKFNKFCEDAGIEHQLTTPCTPQQNGVVERKNRTLMEMT 84
Query: 244 RWLLHEFGFHRQWWAEATFIASYLSNYWPHKILNMK*P*RHGRTKKPQ-SPLKSF 405
R LLHE G +++WAEA + +L N P K L K P KP+ LK+F
Sbjct: 85 RCLLHEKGLPKKFWAEAAHTSVFLLNRLPTKALQQKTPFEAWYDYKPRLQNLKTF 139
Score = 25.4 bits (54), Expect(3) = 1e-12
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +2
Query: 392 HLKVFGKEYFYLVPRELRKKLDKKKQS 472
+LK FG F +P R KLDKK ++
Sbjct: 135 NLKTFGCLCFSYIPHVKRDKLDKKAEA 161
Score = 22.3 bits (46), Expect(3) = 1e-12
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = +2
Query: 20 WIYFLKKKSE 49
WIYF+K KSE
Sbjct: 3 WIYFMKFKSE 12
>gb|ABR16307.1| unknown [Picea sitchensis]
Length = 407
Score = 64.7 bits (156), Expect(2) = 6e-12
Identities = 38/100 (38%), Positives = 52/100 (52%), Gaps = 7/100 (7%)
Frame = +1
Query: 106 IQILRIDGGQEYQYLEFNEFCKYKDIRRRVAV-------SNAERKNRVIMKTTRWLLHEF 264
I+ILR D G+EY EF+ +CKY I+R V AERKNR +M+ R +LH
Sbjct: 197 IKILRTDNGKEYVNKEFDHYCKYNGIKREHTVPYTPQQNGVAERKNRTLMEMARCMLHAR 256
Query: 265 GFHRQWWAEATFIASYLSNYWPHKILNMK*P*RHGRTKKP 384
++WAEA A+Y+ N P + K P +KP
Sbjct: 257 NMDPKFWAEAINTATYIVNRTPTIAVKHKTPEEAWSRRKP 296
Score = 31.2 bits (69), Expect(2) = 6e-12
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = +2
Query: 392 HLKVFGKEYFYLVPRELRKKLDKK 463
H KVFG + + +P E RKKLD+K
Sbjct: 300 HFKVFGCDVYVHIPDEKRKKLDRK 323
>gb|ACN78973.1| copia-type polyprotein [Glycine max] gi|225016157|gb|ACN78980.1|
copia-type polyprotein [Glycine max]
Length = 1042
Score = 62.0 bits (149), Expect(3) = 1e-11
Identities = 37/84 (44%), Positives = 46/84 (54%), Gaps = 7/84 (8%)
Frame = +1
Query: 106 IQILRIDGGQEYQYLEFNEFCKYKDIRRRVAVSN-------AERKNRVIMKTTRWLLHEF 264
I+ LR D G E+ EFNEFC+ IRR + V AERKNR I+ TR +L
Sbjct: 281 IKALRSDRGGEFTSKEFNEFCEKYGIRRPLTVPRSPQQNGVAERKNRTILNMTRCMLKAK 340
Query: 265 GFHRQWWAEATFIASYLSNYWPHK 336
+++WAEA A YLSN P K
Sbjct: 341 NMPKEFWAEAVACAVYLSNRSPTK 364
Score = 28.1 bits (61), Expect(3) = 1e-11
Identities = 10/18 (55%), Positives = 15/18 (83%)
Frame = +2
Query: 17 SWIYFLKKKSEYF*SLRN 70
+W+YFLK+KSE F + +N
Sbjct: 251 TWVYFLKQKSEAFVAFKN 268
Score = 23.9 bits (50), Expect(3) = 1e-11
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +2
Query: 392 HLKVFGKEYFYLVPRELRKKLDKKKQ 469
HL+VFG + VP + R KLD + +
Sbjct: 384 HLRVFGSIAYAHVPDQGRFKLDDRSE 409
>emb|CAN64779.1| hypothetical protein VITISV_043230 [Vitis vinifera]
Length = 1102
Score = 67.4 bits (163), Expect(2) = 5e-11
Identities = 41/115 (35%), Positives = 60/115 (52%), Gaps = 8/115 (6%)
Frame = +1
Query: 85 QNVKEVKIQILRIDGGQEYQYLEFNEFCKYKDIRRRVAVSNA-------ERKNRVIMKTT 243
+N + K+Q++R D G EY +FN+FC+ I ++ ERKNR +M+ T
Sbjct: 389 ENQSKCKMQVIRSDNGXEYTSEKFNKFCEDAGIEHQLTTPYTPQQNGVVERKNRTLMEMT 448
Query: 244 RWLLHEFGFHRQWWAEATFIASYLSNYWPHKILNMK*P*RHGRTKKPQ-SPLKSF 405
R LLHE G +++WAEA + +L N P K L P KP+ LK+F
Sbjct: 449 RCLLHEKGLPKKFWAEAAHTSVFLLNRLPTKALQQXTPFEAWYGYKPRLQNLKTF 503
Score = 25.4 bits (54), Expect(2) = 5e-11
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +2
Query: 392 HLKVFGKEYFYLVPRELRKKLDKKKQS 472
+LK FG F +P R KLDKK ++
Sbjct: 499 NLKTFGCLCFSYIPHVKRDKLDKKAEA 525
>ref|XP_006590177.1| PREDICTED: uncharacterized protein LOC102669657 [Glycine max]
Length = 711
Score = 55.8 bits (133), Expect(3) = 7e-11
Identities = 38/110 (34%), Positives = 57/110 (51%), Gaps = 8/110 (7%)
Frame = +1
Query: 100 VKIQILRIDGGQEYQYLEFNEFCKYKDIRRRVAVSN-------AERKNRVIMKTTRWLLH 258
+ I+ +R D G E+ +FN++C+ IRR + V AERKNR I+ R +L
Sbjct: 461 LSIKAMRSDRGGEFTSNKFNKYCEDHGIRRPLTVPRSPQQNGVAERKNRTILNMVRSMLK 520
Query: 259 EFGFHRQWWAEATFIASYLSNYWPHKILNMK*P*RHGRTKKPQ-SPLKSF 405
+++WAEA A YL+N P + ++ K P +KP S LK F
Sbjct: 521 SKKMPKEFWAEAVACAVYLTNRSPTRSVHEKTPQEAWSGRKPGISHLKVF 570
Score = 28.9 bits (63), Expect(3) = 7e-11
Identities = 14/26 (53%), Positives = 16/26 (61%)
Frame = +2
Query: 392 HLKVFGKEYFYLVPRELRKKLDKKKQ 469
HLKVFG + VP E R KLD K +
Sbjct: 566 HLKVFGSIAYTHVPDEKRTKLDDKSE 591
Score = 26.9 bits (58), Expect(3) = 7e-11
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +2
Query: 17 SWIYFLKKKSEYF*SLRNSANLCKMLRKLKSKSL 118
+W+YFLK+KSE F + + L + L K++
Sbjct: 433 TWVYFLKEKSEVFENFKKFKALVEKESGLSIKAM 466
>dbj|BAB11200.1| copia-type polyprotein [Arabidopsis thaliana]
gi|13872710|emb|CAC37622.1| polyprotein [Arabidopsis
thaliana]
Length = 1334
Score = 62.4 bits (150), Expect(2) = 1e-10
Identities = 36/88 (40%), Positives = 48/88 (54%), Gaps = 7/88 (7%)
Frame = +1
Query: 103 KIQILRIDGGQEYQYLEFNEFCKYKDIRRRVAVSN-------AERKNRVIMKTTRWLLHE 261
K+ LR D G EY EF+E+CK I+R++ + AERKNR +M TR +L E
Sbjct: 558 KLVCLRSDRGGEYNSREFDEYCKEFGIKRQLTAAYTPQQNGVAERKNRSVMNMTRCMLME 617
Query: 262 FGFHRQWWAEATFIASYLSNYWPHKILN 345
R++W EA A Y+ N P K LN
Sbjct: 618 MSVPRKFWPEAVQYAVYILNRSPSKALN 645
Score = 28.9 bits (63), Expect(2) = 1e-10
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = +2
Query: 392 HLKVFGKEYFYLVPRELRKKLDKKKQSREIYRVS 493
HL++FG + LVP + R KLD+K ++ VS
Sbjct: 662 HLRIFGSLAYALVPYQKRIKLDEKSIKCVMFGVS 695
>gb|AAG51247.1|AC055769_6 copia-type polyprotein, putative; 28768-32772 [Arabidopsis
thaliana]
Length = 1334
Score = 62.4 bits (150), Expect(2) = 1e-10
Identities = 36/88 (40%), Positives = 48/88 (54%), Gaps = 7/88 (7%)
Frame = +1
Query: 103 KIQILRIDGGQEYQYLEFNEFCKYKDIRRRVAVSN-------AERKNRVIMKTTRWLLHE 261
K+ LR D G EY EF+E+CK I+R++ + AERKNR +M TR +L E
Sbjct: 558 KLVCLRSDRGGEYNSREFDEYCKEFGIKRQLTAAYTPQQNGVAERKNRSVMNMTRCMLME 617
Query: 262 FGFHRQWWAEATFIASYLSNYWPHKILN 345
R++W EA A Y+ N P K LN
Sbjct: 618 MSVPRKFWPEAVQYAVYILNRSPSKALN 645
Score = 28.9 bits (63), Expect(2) = 1e-10
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = +2
Query: 392 HLKVFGKEYFYLVPRELRKKLDKKKQSREIYRVS 493
HL++FG + LVP + R KLD+K ++ VS
Sbjct: 662 HLRIFGSLAYALVPYQKRIKLDEKSIKCVMFGVS 695
>gb|AAF25964.2|AC017118_1 F6N18.1 [Arabidopsis thaliana]
Length = 1207
Score = 62.4 bits (150), Expect(2) = 1e-10
Identities = 36/88 (40%), Positives = 48/88 (54%), Gaps = 7/88 (7%)
Frame = +1
Query: 103 KIQILRIDGGQEYQYLEFNEFCKYKDIRRRVAVSN-------AERKNRVIMKTTRWLLHE 261
K+ LR D G EY EF+E+CK I+R++ + AERKNR +M TR +L E
Sbjct: 463 KLVCLRSDRGGEYNSREFDEYCKEFGIKRQLTAAYTPQQNGVAERKNRSVMNMTRCMLME 522
Query: 262 FGFHRQWWAEATFIASYLSNYWPHKILN 345
R++W EA A Y+ N P K LN
Sbjct: 523 MSVPRKFWPEAVQYAVYILNRSPSKALN 550
Score = 28.9 bits (63), Expect(2) = 1e-10
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = +2
Query: 392 HLKVFGKEYFYLVPRELRKKLDKKKQSREIYRVS 493
HL++FG + LVP + R KLD+K ++ VS
Sbjct: 567 HLRIFGSLAYALVPYQKRIKLDEKSIKCVMFGVS 600
>emb|CAN59755.1| hypothetical protein VITISV_034567 [Vitis vinifera]
Length = 1333
Score = 62.8 bits (151), Expect(3) = 1e-10
Identities = 36/98 (36%), Positives = 51/98 (52%), Gaps = 7/98 (7%)
Frame = +1
Query: 85 QNVKEVKIQILRIDGGQEYQYLEFNEFCKYKDIRRRVAVSNA-------ERKNRVIMKTT 243
+N E +I+++R D G EY +FN+FC+ I ++ ERKNR IM+ T
Sbjct: 493 ENQSEYRIKVIRSDNGTEYTSEKFNKFCEDAGIDHQLTAPYTPQQNGVVERKNRTIMEMT 552
Query: 244 RWLLHEFGFHRQWWAEATFIASYLSNYWPHKILNMK*P 357
R LLHE + +W EA I +L N P K L + P
Sbjct: 553 RCLLHEKELPKSFWVEAANIXVFLLNRLPTKALQKQTP 590
Score = 26.6 bits (57), Expect(3) = 1e-10
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +2
Query: 377 KNLNLHLKVFGKEYFYLVPRELRKKLDKKKQ 469
K + ++LK FG F VP+ + KLDKK +
Sbjct: 598 KPMLMNLKTFGCLCFSYVPQVKKDKLDKKSE 628
Score = 21.2 bits (43), Expect(3) = 1e-10
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +2
Query: 20 WIYFLKKKSE 49
WIYFL KSE
Sbjct: 471 WIYFLTYKSE 480
>emb|CAN74029.1| hypothetical protein VITISV_013540 [Vitis vinifera]
Length = 894
Score = 56.6 bits (135), Expect(3) = 1e-10
Identities = 36/98 (36%), Positives = 47/98 (47%), Gaps = 7/98 (7%)
Frame = +1
Query: 85 QNVKEVKIQILRIDGGQEYQYLEFNEFCKYKDIRRRVAVSN-------AERKNRVIMKTT 243
+N + I+ILR D G EY +F EFC I ++ +ERKNR +M+
Sbjct: 146 ENQSNLSIKILRSDNGTEYTSSQFVEFCSTAGIECQLTTPYTPQQNGVSERKNRTVMEMA 205
Query: 244 RWLLHEFGFHRQWWAEATFIASYLSNYWPHKILNMK*P 357
R LL E +WAEA + YL N P K L K P
Sbjct: 206 RCLLFEKKMPSNFWAEAVNTSVYLLNRLPTKSLKNKTP 243
Score = 30.8 bits (68), Expect(3) = 1e-10
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +2
Query: 392 HLKVFGKEYFYLVPRELRKKLDKKKQ 469
HLK+FG +Y VP R KLD + Q
Sbjct: 256 HLKIFGSICYYHVPEPKRSKLDSRAQ 281
Score = 23.1 bits (48), Expect(3) = 1e-10
Identities = 7/12 (58%), Positives = 10/12 (83%)
Frame = +2
Query: 20 WIYFLKKKSEYF 55
W+YF+K K+E F
Sbjct: 124 WVYFIKLKNEVF 135
>emb|CAN63433.1| hypothetical protein VITISV_033829 [Vitis vinifera]
Length = 1072
Score = 61.2 bits (147), Expect(3) = 2e-10
Identities = 35/98 (35%), Positives = 51/98 (52%), Gaps = 7/98 (7%)
Frame = +1
Query: 85 QNVKEVKIQILRIDGGQEYQYLEFNEFCKYKDIRRRVAVSNA-------ERKNRVIMKTT 243
+N E +I+++R + G EY +FN+FC+ I ++ ERKNR IM+ T
Sbjct: 465 ENQSEYRIKVIRSNNGTEYTSEKFNKFCEDAGIDHQLTAPYTPQQNGVVERKNRTIMEMT 524
Query: 244 RWLLHEFGFHRQWWAEATFIASYLSNYWPHKILNMK*P 357
R LLHE + +WAEA +L N P K L + P
Sbjct: 525 RCLLHEKELPKSFWAEAANTVVFLLNILPTKALQKQAP 562
Score = 27.7 bits (60), Expect(3) = 2e-10
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +2
Query: 377 KNLNLHLKVFGKEYFYLVPRELRKKLDKKKQ 469
K + ++LK FG F VP+ R KLDKK +
Sbjct: 570 KPMLMNLKTFGCLCFSYVPQVKRDKLDKKSE 600
Score = 20.8 bits (42), Expect(3) = 2e-10
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +2
Query: 20 WIYFLKKKSE 49
WIYFL KSE
Sbjct: 443 WIYFLTCKSE 452
>gb|ABW74566.1| integrase [Boechera divaricarpa]
Length = 1165
Score = 53.9 bits (128), Expect(3) = 4e-10
Identities = 31/91 (34%), Positives = 49/91 (53%), Gaps = 8/91 (8%)
Frame = +1
Query: 97 EVKIQILRIDGGQEYQYLEFNEFCKYKDIRRRVAVSN-------AERKNRVIMKTTRWLL 255
E ++++LR D G E+ +FN+FC+ + I + + AERKN +++ R +L
Sbjct: 399 EQQVKVLRTDRGGEFTSTKFNQFCEKEGIHHELTTAYTPEQNGVAERKNTTVVEMARSML 458
Query: 256 HEFGFHRQWWAEATFIASYLSNYWPHK-ILN 345
E Q+WAE+ A YL N P K +LN
Sbjct: 459 KERNLPNQFWAESVRTAVYLLNISPTKAVLN 489
Score = 28.5 bits (62), Expect(3) = 4e-10
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +2
Query: 392 HLKVFGKEYFYLVPRELRKKLDKKKQ 469
HL+VFG + L+ RKKLD+K +
Sbjct: 505 HLRVFGSVCYSLIDAHNRKKLDEKSE 530
Score = 26.6 bits (57), Expect(3) = 4e-10
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = +2
Query: 17 SWIYFLKKKSEYF*SLRN 70
SW+YFLK K E F +N
Sbjct: 372 SWVYFLKSKGEAFDMFKN 389
>emb|CAN79061.1| hypothetical protein VITISV_024577 [Vitis vinifera]
Length = 1424
Score = 58.2 bits (139), Expect(3) = 7e-10
Identities = 35/100 (35%), Positives = 52/100 (52%), Gaps = 7/100 (7%)
Frame = +1
Query: 106 IQILRIDGGQEYQYLEFNEFCKYKDIRRRVAVSNA-------ERKNRVIMKTTRWLLHEF 264
I+ LR D G EY +F FC+ + + R++ V+ ERKN+ +M+ + +L+E
Sbjct: 655 IKTLRSDRGMEYTSSQFGNFCEDEGVERQLTVAYTPQQNGVVERKNQTVMEMAKAMLYEK 714
Query: 265 GFHRQWWAEATFIASYLSNYWPHKILNMK*P*RHGRTKKP 384
G + +WAEA A YL N P K L K P +KP
Sbjct: 715 GLPKIFWAEAVNTAVYLLNRCPTKALLNKTPIEAWSGRKP 754
Score = 25.8 bits (55), Expect(3) = 7e-10
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +2
Query: 392 HLKVFGKEYFYLVPRELRKKLDKKKQ 469
H KVFG + VP++ R KLD+ +
Sbjct: 758 HFKVFGCLCYSQVPKQRRSKLDETSE 783
Score = 24.3 bits (51), Expect(3) = 7e-10
Identities = 7/13 (53%), Positives = 12/13 (92%)
Frame = +2
Query: 17 SWIYFLKKKSEYF 55
+W++F+K+KSE F
Sbjct: 625 TWVFFMKQKSEVF 637
>emb|CAB75469.1| copia-type reverse transcriptase-like protein [Arabidopsis
thaliana]
Length = 1272
Score = 54.7 bits (130), Expect(3) = 9e-10
Identities = 35/100 (35%), Positives = 51/100 (51%), Gaps = 7/100 (7%)
Frame = +1
Query: 106 IQILRIDGGQEYQYLEFNEFCKYKDIRRRVAVSN-------AERKNRVIMKTTRWLLHEF 264
I+ +R D G E+ EF ++C+ IRR++ V AERKNR I++ R +L
Sbjct: 590 IKTMRSDSGGEFTSKEFLKYCEDNGIRRQLTVPRSPQQNGVAERKNRTILEMARSMLKSK 649
Query: 265 GFHRQWWAEATFIASYLSNYWPHKILNMK*P*RHGRTKKP 384
++ WAEA A YL N P K ++ K P +KP
Sbjct: 650 RLPKELWAEAVACAVYLLNRSPTKSVSGKTPQEAWSGRKP 689
Score = 26.6 bits (57), Expect(3) = 9e-10
Identities = 9/13 (69%), Positives = 12/13 (92%)
Frame = +2
Query: 17 SWIYFLKKKSEYF 55
+W+YFLK+KSE F
Sbjct: 560 TWVYFLKEKSEVF 572
Score = 26.6 bits (57), Expect(3) = 9e-10
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +2
Query: 392 HLKVFGKEYFYLVPRELRKKLDKKKQ 469
HL+VFG VP E R KLD K +
Sbjct: 693 HLRVFGSIAHAHVPDEKRNKLDDKSE 718
>emb|CAA69272.1| lectin receptor kinase [Arabidopsis thaliana]
Length = 623
Score = 54.7 bits (130), Expect(3) = 9e-10
Identities = 35/100 (35%), Positives = 51/100 (51%), Gaps = 7/100 (7%)
Frame = +1
Query: 106 IQILRIDGGQEYQYLEFNEFCKYKDIRRRVAVSN-------AERKNRVIMKTTRWLLHEF 264
I+ +R D G E+ EF ++C+ IRR++ V AERKNR I++ R +L
Sbjct: 87 IKTMRSDSGGEFTSKEFLKYCEDNGIRRQLTVPRSPQQNGVAERKNRTILEMARSMLKSK 146
Query: 265 GFHRQWWAEATFIASYLSNYWPHKILNMK*P*RHGRTKKP 384
++ WAEA A YL N P K ++ K P +KP
Sbjct: 147 RLPKELWAEAVACAVYLLNRSPTKSVSGKTPQEAWSGRKP 186
Score = 26.6 bits (57), Expect(3) = 9e-10
Identities = 9/13 (69%), Positives = 12/13 (92%)
Frame = +2
Query: 17 SWIYFLKKKSEYF 55
+W+YFLK+KSE F
Sbjct: 57 TWVYFLKEKSEVF 69
Score = 26.6 bits (57), Expect(3) = 9e-10
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +2
Query: 392 HLKVFGKEYFYLVPRELRKKLDKKKQ 469
HL+VFG VP E R KLD K +
Sbjct: 190 HLRVFGSIAHAHVPDEKRNKLDDKSE 215
>gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabidopsis thaliana]
gi|12321387|gb|AAG50765.1|AC079131_10 copia-type
polyprotein, putative [Arabidopsis thaliana]
Length = 1320
Score = 53.9 bits (128), Expect(3) = 1e-09
Identities = 35/100 (35%), Positives = 51/100 (51%), Gaps = 7/100 (7%)
Frame = +1
Query: 106 IQILRIDGGQEYQYLEFNEFCKYKDIRRRVAVSN-------AERKNRVIMKTTRWLLHEF 264
I+ +R D G E+ EF ++C+ IRR++ V AERKNR I++ R +L
Sbjct: 590 IKTMRSDRGGEFTSKEFLKYCEDNGIRRQLTVPRSPQQNGVAERKNRTILEMARSMLKSK 649
Query: 265 GFHRQWWAEATFIASYLSNYWPHKILNMK*P*RHGRTKKP 384
++ WAEA A YL N P K ++ K P +KP
Sbjct: 650 RLPKELWAEAVACAVYLLNRSPTKSVSGKTPQEAWSGRKP 689
Score = 26.6 bits (57), Expect(3) = 1e-09
Identities = 9/13 (69%), Positives = 12/13 (92%)
Frame = +2
Query: 17 SWIYFLKKKSEYF 55
+W+YFLK+KSE F
Sbjct: 560 TWVYFLKEKSEVF 572
Score = 26.6 bits (57), Expect(3) = 1e-09
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +2
Query: 392 HLKVFGKEYFYLVPRELRKKLDKKKQ 469
HL+VFG VP E R KLD K +
Sbjct: 693 HLRVFGSIAHAHVPDEKRSKLDDKSE 718
>gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabidopsis thaliana]
Length = 1352
Score = 52.8 bits (125), Expect(3) = 3e-09
Identities = 33/91 (36%), Positives = 48/91 (52%), Gaps = 7/91 (7%)
Frame = +1
Query: 106 IQILRIDGGQEYQYLEFNEFCKYKDIRRRVAVSN-------AERKNRVIMKTTRWLLHEF 264
I+ +R D G E+ EF ++C+ IRR++ V AERKNR I++ R +L
Sbjct: 590 IKTMRSDRGGEFTSKEFLKYCEDNGIRRQLTVPRSPQQNGVAERKNRTILEMARSMLKSK 649
Query: 265 GFHRQWWAEATFIASYLSNYWPHKILNMK*P 357
++ WAEA A YL N P K ++ K P
Sbjct: 650 RLPKELWAEAVACAVYLLNRSPTKSVSGKTP 680
Score = 26.6 bits (57), Expect(3) = 3e-09
Identities = 9/13 (69%), Positives = 12/13 (92%)
Frame = +2
Query: 17 SWIYFLKKKSEYF 55
+W+YFLK+KSE F
Sbjct: 560 TWVYFLKEKSEVF 572
Score = 26.6 bits (57), Expect(3) = 3e-09
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +2
Query: 392 HLKVFGKEYFYLVPRELRKKLDKKKQ 469
HL+VFG VP E R KLD K +
Sbjct: 693 HLRVFGSIAHAHVPDEKRSKLDDKSE 718
>emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana]
Length = 1352
Score = 52.8 bits (125), Expect(3) = 3e-09
Identities = 34/100 (34%), Positives = 51/100 (51%), Gaps = 7/100 (7%)
Frame = +1
Query: 106 IQILRIDGGQEYQYLEFNEFCKYKDIRRRVAVSNA-------ERKNRVIMKTTRWLLHEF 264
I+ +R D G E+ EF ++C+ IRR++ V + ERKNR I++ R +L
Sbjct: 590 IKTMRSDRGGEFTSKEFLKYCEDNGIRRQLTVPRSPQQNGVVERKNRTILEMARSMLKSK 649
Query: 265 GFHRQWWAEATFIASYLSNYWPHKILNMK*P*RHGRTKKP 384
++ WAEA A YL N P K ++ K P +KP
Sbjct: 650 RLPKELWAEAVACAVYLLNRSPTKSVSGKTPQEAWSGRKP 689
Score = 26.6 bits (57), Expect(3) = 3e-09
Identities = 9/13 (69%), Positives = 12/13 (92%)
Frame = +2
Query: 17 SWIYFLKKKSEYF 55
+W+YFLK+KSE F
Sbjct: 560 TWVYFLKEKSEVF 572
Score = 26.6 bits (57), Expect(3) = 3e-09
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +2
Query: 392 HLKVFGKEYFYLVPRELRKKLDKKKQ 469
HL+VFG VP E R KLD K +
Sbjct: 693 HLRVFGSIAHAHVPDEKRSKLDDKSE 718
>gb|AAD50001.1|AC007259_14 Hypothetical protein [Arabidopsis thaliana]
Length = 1352
Score = 52.8 bits (125), Expect(3) = 3e-09
Identities = 34/100 (34%), Positives = 51/100 (51%), Gaps = 7/100 (7%)
Frame = +1
Query: 106 IQILRIDGGQEYQYLEFNEFCKYKDIRRRVAVSNA-------ERKNRVIMKTTRWLLHEF 264
I+ +R D G E+ EF ++C+ IRR++ V + ERKNR I++ R +L
Sbjct: 590 IKTMRSDRGGEFTSKEFLKYCEDNGIRRQLTVPRSPQQNGVVERKNRTILEMARSMLKSK 649
Query: 265 GFHRQWWAEATFIASYLSNYWPHKILNMK*P*RHGRTKKP 384
++ WAEA A YL N P K ++ K P +KP
Sbjct: 650 RLPKELWAEAVACAVYLLNRSPTKSVSGKTPQEAWSGRKP 689
Score = 26.6 bits (57), Expect(3) = 3e-09
Identities = 9/13 (69%), Positives = 12/13 (92%)
Frame = +2
Query: 17 SWIYFLKKKSEYF 55
+W+YFLK+KSE F
Sbjct: 560 TWVYFLKEKSEVF 572
Score = 26.6 bits (57), Expect(3) = 3e-09
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +2
Query: 392 HLKVFGKEYFYLVPRELRKKLDKKKQ 469
HL+VFG VP E R KLD K +
Sbjct: 693 HLRVFGSIAHAHVPDEKRSKLDDKSE 718
>emb|CAN67797.1| hypothetical protein VITISV_038915 [Vitis vinifera]
Length = 518
Score = 66.6 bits (161), Expect = 3e-09
Identities = 35/98 (35%), Positives = 54/98 (55%), Gaps = 7/98 (7%)
Frame = +1
Query: 85 QNVKEVKIQILRIDGGQEYQYLEFNEFCKYKDIRRRVAVSNA-------ERKNRVIMKTT 243
+N + K+Q++R D G EY +FN+FC+ DI ++ ERKNR +M+ T
Sbjct: 350 KNKSKCKMQVIRSDNGIEYTSEKFNKFCEDVDIEHQLTTPYTPDQNGVVERKNRTLMEMT 409
Query: 244 RWLLHEFGFHRQWWAEATFIASYLSNYWPHKILNMK*P 357
+ LLH+ G +++W EA + +L N P K L K P
Sbjct: 410 KCLLHDKGLPKKFWTEAAHTSVFLLNRLPTKALQQKTP 447