BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra28_contig00029311
         (613 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004144813.1| PREDICTED: pentatricopeptide repeat-containi...    65   1e-08
tpg|DAA44148.1| TPA: hypothetical protein ZEAMMB73_616668 [Zea m...    65   1e-08
gb|EXB80462.1| hypothetical protein L484_004369 [Morus notabilis]      65   2e-08
gb|EXB37463.1| hypothetical protein L484_002563 [Morus notabilis]      65   2e-08
ref|XP_006391862.1| hypothetical protein EUTSA_v10023350mg [Eutr...    63   6e-08
ref|XP_002465622.1| hypothetical protein SORBIDRAFT_01g042420 [S...    62   1e-07
ref|NP_001031033.1| pentatricopeptide repeat-containing protein ...    62   1e-07
ref|XP_002968311.1| hypothetical protein SELMODRAFT_89033 [Selag...    62   1e-07
ref|XP_006382084.1| hypothetical protein POPTR_0006s27340g [Popu...    62   2e-07
ref|XP_002338159.1| predicted protein [Populus trichocarpa]            62   2e-07
ref|XP_002336216.1| predicted protein [Populus trichocarpa]            62   2e-07
ref|XP_006391821.1| hypothetical protein EUTSA_v10023989mg [Eutr...    61   2e-07
ref|XP_006391749.1| hypothetical protein EUTSA_v10023942mg [Eutr...    61   2e-07
ref|XP_006301404.1| hypothetical protein CARUB_v10021820mg [Caps...    61   2e-07
ref|XP_002976066.1| hypothetical protein SELMODRAFT_53130 [Selag...    61   2e-07
gb|ABQ50556.1| hypothetical protein [Brassica rapa]                    61   3e-07
ref|XP_004142210.1| PREDICTED: pentatricopeptide repeat-containi...    60   4e-07
ref|XP_006432869.1| hypothetical protein CICLE_v10000274mg [Citr...    60   5e-07
ref|XP_006391806.1| hypothetical protein EUTSA_v10023345mg [Eutr...    60   5e-07
gb|AAF79658.1|AC025416_32 F5O11.4 [Arabidopsis thaliana]               60   5e-07

>ref|XP_004144813.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Cucumis sativus]
           gi|449524964|ref|XP_004169491.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g09820-like [Cucumis sativus]
          Length = 611

 Score = 65.5 bits (158), Expect = 1e-08
 Identities = 29/60 (48%), Positives = 42/60 (70%)
 Frame = -2

Query: 609 TCNSLIVGFCNAGRFDEAQKIFDDMLSKNVLPNAVTFSCLINVFCKTSSLDKATELLFNI 430
           T NSL+ G CN G+ +EA+ + D+MLS N+ PN +T++ LIN +CK   L++A EL  NI
Sbjct: 340 TYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNI 399


>tpg|DAA44148.1| TPA: hypothetical protein ZEAMMB73_616668 [Zea mays]
          Length = 838

 Score = 65.1 bits (157), Expect = 1e-08
 Identities = 28/58 (48%), Positives = 45/58 (77%)
 Frame = -2

Query: 603 NSLIVGFCNAGRFDEAQKIFDDMLSKNVLPNAVTFSCLINVFCKTSSLDKATELLFNI 430
           N LI GF  AG+FDEAQ+I ++MLSK +LP+ VT++ +I+++CK+ S+DKA   ++ +
Sbjct: 616 NILINGFRKAGKFDEAQEIMEEMLSKGMLPSVVTYNLMIDIWCKSGSIDKAITCVYKM 673


>gb|EXB80462.1| hypothetical protein L484_004369 [Morus notabilis]
          Length = 718

 Score = 64.7 bits (156), Expect = 2e-08
 Identities = 30/59 (50%), Positives = 39/59 (66%)
 Frame = -2

Query: 600 SLIVGFCNAGRFDEAQKIFDDMLSKNVLPNAVTFSCLINVFCKTSSLDKATELLFNIPR 424
           +LI GFCN G FD   K+FD+ML K + PN VT+S LI+  CK   L +ATE+L  + R
Sbjct: 244 TLISGFCNEGNFDRGYKLFDEMLRKGIAPNVVTYSGLIHQLCKMGKLIEATEMLNEMTR 302


>gb|EXB37463.1| hypothetical protein L484_002563 [Morus notabilis]
          Length = 750

 Score = 64.7 bits (156), Expect = 2e-08
 Identities = 30/59 (50%), Positives = 39/59 (66%)
 Frame = -2

Query: 600 SLIVGFCNAGRFDEAQKIFDDMLSKNVLPNAVTFSCLINVFCKTSSLDKATELLFNIPR 424
           +LI GFCN G FD   K+FD+ML K + PN VT+S LI+  CK   L +ATE+L  + R
Sbjct: 244 TLISGFCNEGNFDRGYKLFDEMLRKGIAPNVVTYSGLIHQLCKMGKLIEATEMLNEMTR 302


>ref|XP_006391862.1| hypothetical protein EUTSA_v10023350mg [Eutrema salsugineum]
           gi|557088368|gb|ESQ29148.1| hypothetical protein
           EUTSA_v10023350mg [Eutrema salsugineum]
          Length = 624

 Score = 63.2 bits (152), Expect = 6e-08
 Identities = 28/56 (50%), Positives = 40/56 (71%)
 Frame = -2

Query: 609 TCNSLIVGFCNAGRFDEAQKIFDDMLSKNVLPNAVTFSCLINVFCKTSSLDKATEL 442
           TCN+LI GFC   R +EA+++F  M+SK +LP+ VT+S LIN FCK+  ++   EL
Sbjct: 357 TCNALINGFCLQDRLEEAKQMFTSMVSKGILPDVVTYSTLINGFCKSKRVEDGMEL 412


>ref|XP_002465622.1| hypothetical protein SORBIDRAFT_01g042420 [Sorghum bicolor]
           gi|241919476|gb|EER92620.1| hypothetical protein
           SORBIDRAFT_01g042420 [Sorghum bicolor]
          Length = 817

 Score = 62.4 bits (150), Expect = 1e-07
 Identities = 26/58 (44%), Positives = 43/58 (74%)
 Frame = -2

Query: 603 NSLIVGFCNAGRFDEAQKIFDDMLSKNVLPNAVTFSCLINVFCKTSSLDKATELLFNI 430
           N LI GF  AG+FDEAQ+I ++MLSK + P+ VT++ +I+++CK+  +DKA   ++ +
Sbjct: 616 NILINGFRKAGKFDEAQEIMEEMLSKGLFPSVVTYNLMIDIWCKSGKIDKAISCVYKM 673


>ref|NP_001031033.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75178969|sp|Q9LPX2.1|PPR39_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At1g12775, mitochondrial; Flags: Precursor
           gi|8698724|gb|AAF78482.1|AC012187_2 Contains similarity
           to an unknown protein F16M19.7 gi|6598837 from
           Arabidopsis thaliana BAC F16M19 gb|AC010795 and contains
           multiple PPR PF|01535 repeats. EST gb|AI999079 comes
           from this gene [Arabidopsis thaliana]
           gi|332190806|gb|AEE28927.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 644

 Score = 62.0 bits (149), Expect = 1e-07
 Identities = 29/57 (50%), Positives = 39/57 (68%)
 Frame = -2

Query: 609 TCNSLIVGFCNAGRFDEAQKIFDDMLSKNVLPNAVTFSCLINVFCKTSSLDKATELL 439
           T N+LI GFCNAGR+D+  K+  DM+ + + PN VTFS LI+ F K   L +A +LL
Sbjct: 300 TYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLL 356


>ref|XP_002968311.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
           gi|300163955|gb|EFJ30565.1| hypothetical protein
           SELMODRAFT_89033 [Selaginella moellendorffii]
          Length = 600

 Score = 62.0 bits (149), Expect = 1e-07
 Identities = 27/57 (47%), Positives = 38/57 (66%)
 Frame = -2

Query: 609 TCNSLIVGFCNAGRFDEAQKIFDDMLSKNVLPNAVTFSCLINVFCKTSSLDKATELL 439
           T N+L+ GFC  G+ DEA KIFD  + +  +P+ VT++ LIN FCK   LD+A  +L
Sbjct: 122 TYNTLLHGFCKVGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRIL 178



 Score = 57.4 bits (137), Expect = 3e-06
 Identities = 25/57 (43%), Positives = 40/57 (70%)
 Frame = -2

Query: 609 TCNSLIVGFCNAGRFDEAQKIFDDMLSKNVLPNAVTFSCLINVFCKTSSLDKATELL 439
           T N+LI GFC A + DEAQ+I   M+S++++P+ VT++ L+N  CK   +D+A  L+
Sbjct: 157 TYNALINGFCKADKLDEAQRILQRMVSESLVPDVVTYNSLVNGLCKNGRVDEARMLI 213


>ref|XP_006382084.1| hypothetical protein POPTR_0006s27340g [Populus trichocarpa]
           gi|550337191|gb|ERP59881.1| hypothetical protein
           POPTR_0006s27340g [Populus trichocarpa]
          Length = 483

 Score = 61.6 bits (148), Expect = 2e-07
 Identities = 29/63 (46%), Positives = 42/63 (66%)
 Frame = -2

Query: 609 TCNSLIVGFCNAGRFDEAQKIFDDMLSKNVLPNAVTFSCLINVFCKTSSLDKATELLFNI 430
           T NSLI G CN  R+ EA  + ++M+S N++PN VTFS LIN+FCK  ++ +A  +L  +
Sbjct: 166 TYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTM 225

Query: 429 PRM 421
             M
Sbjct: 226 TEM 228


>ref|XP_002338159.1| predicted protein [Populus trichocarpa]
          Length = 368

 Score = 61.6 bits (148), Expect = 2e-07
 Identities = 29/63 (46%), Positives = 42/63 (66%)
 Frame = -2

Query: 609 TCNSLIVGFCNAGRFDEAQKIFDDMLSKNVLPNAVTFSCLINVFCKTSSLDKATELLFNI 430
           T NSLI G CN  R+ EA  + ++M+S N++PN VTFS LIN+FCK  ++ +A  +L  +
Sbjct: 82  TYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTM 141

Query: 429 PRM 421
             M
Sbjct: 142 TEM 144


>ref|XP_002336216.1| predicted protein [Populus trichocarpa]
          Length = 616

 Score = 61.6 bits (148), Expect = 2e-07
 Identities = 29/63 (46%), Positives = 42/63 (66%)
 Frame = -2

Query: 609 TCNSLIVGFCNAGRFDEAQKIFDDMLSKNVLPNAVTFSCLINVFCKTSSLDKATELLFNI 430
           T NSLI G CN  R+ EA  + ++M+S N++PN VTFS LIN+FCK  ++ +A  +L  +
Sbjct: 299 TYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTM 358

Query: 429 PRM 421
             M
Sbjct: 359 TEM 361


>ref|XP_006391821.1| hypothetical protein EUTSA_v10023989mg [Eutrema salsugineum]
           gi|557088327|gb|ESQ29107.1| hypothetical protein
           EUTSA_v10023989mg [Eutrema salsugineum]
          Length = 623

 Score = 61.2 bits (147), Expect = 2e-07
 Identities = 29/56 (51%), Positives = 39/56 (69%)
 Frame = -2

Query: 609 TCNSLIVGFCNAGRFDEAQKIFDDMLSKNVLPNAVTFSCLINVFCKTSSLDKATEL 442
           T NSLI GFC   R DEA+++F+ M+SK  LPN VT++ LIN FCK+  ++   EL
Sbjct: 356 TYNSLINGFCMHDRLDEAERMFEFMVSKGSLPNVVTYTTLINGFCKSKRVEDGMEL 411


>ref|XP_006391749.1| hypothetical protein EUTSA_v10023942mg [Eutrema salsugineum]
           gi|557088255|gb|ESQ29035.1| hypothetical protein
           EUTSA_v10023942mg [Eutrema salsugineum]
          Length = 635

 Score = 61.2 bits (147), Expect = 2e-07
 Identities = 28/56 (50%), Positives = 39/56 (69%)
 Frame = -2

Query: 609 TCNSLIVGFCNAGRFDEAQKIFDDMLSKNVLPNAVTFSCLINVFCKTSSLDKATEL 442
           TC+SLI GFC   R DEA+++F+ M+SK  LPN VT++ LIN  CK+  ++   EL
Sbjct: 368 TCSSLINGFCMHDRLDEAERMFEFMVSKGSLPNVVTYTTLINGLCKSKRVEDGMEL 423


>ref|XP_006301404.1| hypothetical protein CARUB_v10021820mg [Capsella rubella]
           gi|482570114|gb|EOA34302.1| hypothetical protein
           CARUB_v10021820mg [Capsella rubella]
          Length = 678

 Score = 61.2 bits (147), Expect = 2e-07
 Identities = 26/56 (46%), Positives = 39/56 (69%)
 Frame = -2

Query: 609 TCNSLIVGFCNAGRFDEAQKIFDDMLSKNVLPNAVTFSCLINVFCKTSSLDKATEL 442
           T N+LI  F N G+F EAQ+++++MLS+ ++PN VT+S +IN  CK   LD A  +
Sbjct: 294 TFNTLIYSFVNEGKFSEAQELYEEMLSRGIVPNVVTYSSIINGLCKRDRLDDAKHM 349


>ref|XP_002976066.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
           gi|300156342|gb|EFJ22971.1| hypothetical protein
           SELMODRAFT_53130 [Selaginella moellendorffii]
          Length = 440

 Score = 61.2 bits (147), Expect = 2e-07
 Identities = 27/57 (47%), Positives = 37/57 (64%)
 Frame = -2

Query: 609 TCNSLIVGFCNAGRFDEAQKIFDDMLSKNVLPNAVTFSCLINVFCKTSSLDKATELL 439
           T N+L+ GFC  G  DEA KIFD  + +  +P+ VT++ LIN FCK   LD+A  +L
Sbjct: 47  TYNTLLHGFCKVGELDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRIL 103



 Score = 59.3 bits (142), Expect = 8e-07
 Identities = 26/57 (45%), Positives = 40/57 (70%)
 Frame = -2

Query: 609 TCNSLIVGFCNAGRFDEAQKIFDDMLSKNVLPNAVTFSCLINVFCKTSSLDKATELL 439
           T N+LI GFC A + DEAQ+I   M+S+N++P+ VT++ L+N  CK   +D+A  L+
Sbjct: 82  TYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNSLVNGLCKNGRVDEARMLI 138


>gb|ABQ50556.1| hypothetical protein [Brassica rapa]
          Length = 348

 Score = 60.8 bits (146), Expect = 3e-07
 Identities = 27/50 (54%), Positives = 36/50 (72%)
 Frame = -2

Query: 609 TCNSLIVGFCNAGRFDEAQKIFDDMLSKNVLPNAVTFSCLINVFCKTSSL 460
           T NSLI GFCNAGR+D+  ++  DM+++N+ PN VTFS LI+ F K   L
Sbjct: 293 TYNSLIGGFCNAGRWDDGAQLLRDMITRNITPNVVTFSALIDCFVKEGKL 342


>ref|XP_004142210.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Cucumis sativus]
           gi|449525343|ref|XP_004169677.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Cucumis sativus]
          Length = 768

 Score = 60.5 bits (145), Expect = 4e-07
 Identities = 27/56 (48%), Positives = 39/56 (69%)
 Frame = -2

Query: 609 TCNSLIVGFCNAGRFDEAQKIFDDMLSKNVLPNAVTFSCLINVFCKTSSLDKATEL 442
           T NSLI G C  G  +EA KI D M+S++  PNAVT++ +I+  CK + +D+ATE+
Sbjct: 345 TYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEI 400


>ref|XP_006432869.1| hypothetical protein CICLE_v10000274mg [Citrus clementina]
           gi|568835123|ref|XP_006471629.1| PREDICTED:
           pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic-like isoform X1 [Citrus sinensis]
           gi|568835125|ref|XP_006471630.1| PREDICTED:
           pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic-like isoform X2 [Citrus sinensis]
           gi|557534991|gb|ESR46109.1| hypothetical protein
           CICLE_v10000274mg [Citrus clementina]
          Length = 833

 Score = 60.1 bits (144), Expect = 5e-07
 Identities = 28/55 (50%), Positives = 37/55 (67%)
 Frame = -2

Query: 603 NSLIVGFCNAGRFDEAQKIFDDMLSKNVLPNAVTFSCLINVFCKTSSLDKATELL 439
           N+LI G+C  G   EA KI DDM+SK + PN+VTF+ LI+ FCK+  +D A   L
Sbjct: 361 NTLIDGYCKKGNISEALKIRDDMVSKGMSPNSVTFNSLIHGFCKSGQMDNAENAL 415


>ref|XP_006391806.1| hypothetical protein EUTSA_v10023345mg [Eutrema salsugineum]
           gi|557088312|gb|ESQ29092.1| hypothetical protein
           EUTSA_v10023345mg [Eutrema salsugineum]
          Length = 631

 Score = 60.1 bits (144), Expect = 5e-07
 Identities = 27/56 (48%), Positives = 39/56 (69%)
 Frame = -2

Query: 609 TCNSLIVGFCNAGRFDEAQKIFDDMLSKNVLPNAVTFSCLINVFCKTSSLDKATEL 442
           T N+LI GFC   R +EA+++FD M+S+ +LPN VT+S LIN  CK+  ++   EL
Sbjct: 364 TYNALINGFCMHDRLEEAKEMFDSMVSRGILPNVVTYSTLINGLCKSKRVEDGMEL 419


>gb|AAF79658.1|AC025416_32 F5O11.4 [Arabidopsis thaliana]
          Length = 975

 Score = 60.1 bits (144), Expect = 5e-07
 Identities = 29/56 (51%), Positives = 37/56 (66%)
 Frame = -2

Query: 609 TCNSLIVGFCNAGRFDEAQKIFDDMLSKNVLPNAVTFSCLINVFCKTSSLDKATEL 442
           T N LI GFCNAGR+D+  K+  DM+ + + PN VTFS LI+ F K   L +A EL
Sbjct: 398 TYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEEL 453