BLASTX nr result
ID: Ephedra28_contig00029294
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra28_contig00029294
(741 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006845688.1| hypothetical protein AMTR_s00019p00236380 [A... 204 2e-50
ref|XP_002531020.1| pentatricopeptide repeat-containing protein,... 202 9e-50
ref|XP_004237781.1| PREDICTED: pentatricopeptide repeat-containi... 197 3e-48
gb|EMJ21852.1| hypothetical protein PRUPE_ppa003671mg [Prunus pe... 196 7e-48
ref|XP_006359825.1| PREDICTED: pentatricopeptide repeat-containi... 195 2e-47
ref|XP_006485771.1| PREDICTED: pentatricopeptide repeat-containi... 192 1e-46
ref|XP_006440940.1| hypothetical protein CICLE_v10019823mg [Citr... 192 1e-46
gb|EOY26249.1| Pentatricopeptide repeat-containing protein, puta... 191 2e-46
ref|XP_004308198.1| PREDICTED: pentatricopeptide repeat-containi... 190 4e-46
ref|XP_002272860.1| PREDICTED: pentatricopeptide repeat-containi... 190 5e-46
emb|CAN75780.1| hypothetical protein VITISV_012424 [Vitis vinifera] 190 5e-46
ref|XP_004143709.1| PREDICTED: pentatricopeptide repeat-containi... 186 7e-45
ref|XP_006402489.1| hypothetical protein EUTSA_v10006474mg [Eutr... 186 9e-45
gb|EMT03355.1| hypothetical protein F775_02553 [Aegilops tauschii] 181 3e-43
ref|NP_001058444.1| Os06g0694600 [Oryza sativa Japonica Group] g... 181 3e-43
ref|XP_006290409.1| hypothetical protein CARUB_v10019081mg [Caps... 179 9e-43
ref|XP_004966151.1| PREDICTED: pentatricopeptide repeat-containi... 179 1e-42
ref|NP_191695.1| pentatricopeptide repeat-containing protein [Ar... 179 1e-42
gb|EXC35161.1| hypothetical protein L484_022712 [Morus notabilis] 178 1e-42
ref|XP_002878376.1| pentatricopeptide repeat-containing protein ... 177 3e-42
>ref|XP_006845688.1| hypothetical protein AMTR_s00019p00236380 [Amborella trichopoda]
gi|548848260|gb|ERN07363.1| hypothetical protein
AMTR_s00019p00236380 [Amborella trichopoda]
Length = 491
Score = 204 bits (519), Expect = 2e-50
Identities = 96/242 (39%), Positives = 154/242 (63%)
Frame = -1
Query: 735 TYNILLDGFRRAGNVVATEMFFRQLITRGIKPNNVTYSIMITGLCRRRKFRDALELFHTM 556
T NILL GF+ +GN+ A E+F+ ++I RG PNNV+Y+I I LC++ + R+A++L M
Sbjct: 200 TLNILLLGFKESGNITAMELFYHEIIRRGCTPNNVSYNIRIDALCKKGRSREAIKLREEM 259
Query: 555 KKEGCQPDVQMYTALIYGLGRACKIRLAGQLFEEMEASGIKPDLIAYNALIVAFCRAKLV 376
+++ C P V+ +T LI+GLG + +LA ++F++M + G+ PD AYNALI A+ R
Sbjct: 260 EEKNCSPTVETFTTLIHGLGISHNPKLAQKVFDDMVSRGLNPDTGAYNALINAYVRVGDT 319
Query: 375 DEALGVMNEMKMKGVDCNSITYHRILFCLIEAWDTRKVKDLFYKMVSDGFTPRVFVVELL 196
+M EM+ KGV ++ TYH + + + D + + L+ +MV + + P++ V +L
Sbjct: 320 KTGRKLMGEMEEKGVGFDNTTYHTMFWGMKNFGDMKGIYGLYKRMVENRWVPKMCTVVML 379
Query: 195 MKFFVKLRRMNMAIQLWRYIISKGCCPHGYVTDYLVIKLCYRGNLQMAYDCCLHLAKRGK 16
MK F M ++LW Y++ GCCPHG+ D LV++LC +G L+ AY+CC + RG+
Sbjct: 380 MKCFCYSDCYKMGLKLWNYLVEMGCCPHGHALDLLVMELCRKGKLEEAYECCRQVLDRGR 439
Query: 15 LP 10
LP
Sbjct: 440 LP 441
>ref|XP_002531020.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223529395|gb|EEF31358.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 530
Score = 202 bits (514), Expect = 9e-50
Identities = 97/239 (40%), Positives = 149/239 (62%)
Frame = -1
Query: 735 TYNILLDGFRRAGNVVATEMFFRQLITRGIKPNNVTYSIMITGLCRRRKFRDALELFHTM 556
T NILL GF++A ++ A E+F+ +++ RG K ++TY+I I C++ F D L +F M
Sbjct: 239 TMNILLLGFKKARDITAMELFYHEIVRRGFKATSLTYNIRIDAYCKKGYFGDGLRIFEEM 298
Query: 555 KKEGCQPDVQMYTALIYGLGRACKIRLAGQLFEEMEASGIKPDLIAYNALIVAFCRAKLV 376
+K+ C P ++ T LI+G G A I A LF+E+ +KPD AYNALI + + K +
Sbjct: 299 EKDNCPPTLETITTLIHGAGVARNIHKARHLFDEIGKRNLKPDTGAYNALISSLVKCKDI 358
Query: 375 DEALGVMNEMKMKGVDCNSITYHRILFCLIEAWDTRKVKDLFYKMVSDGFTPRVFVVELL 196
+ A+ +M+EM+ K + +S+TYH I F L++ DT V DL+++M+S F P+ V +L
Sbjct: 359 ESAMRLMDEMEEKHIGRDSVTYHTIFFGLMKLNDTEGVCDLYHRMISRDFVPKTRTVVML 418
Query: 195 MKFFVKLRRMNMAIQLWRYIISKGCCPHGYVTDYLVIKLCYRGNLQMAYDCCLHLAKRG 19
MKFF R+++ + W+Y++ KG CPHG+ D LV LC RG L AY+C +RG
Sbjct: 419 MKFFCVNSRLDLGLAFWQYMLDKGYCPHGHALDLLVTGLCSRGRLLEAYECSKQFVERG 477
>ref|XP_004237781.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g61360-like [Solanum lycopersicum]
Length = 504
Score = 197 bits (501), Expect = 3e-48
Identities = 96/240 (40%), Positives = 153/240 (63%)
Frame = -1
Query: 735 TYNILLDGFRRAGNVVATEMFFRQLITRGIKPNNVTYSIMITGLCRRRKFRDALELFHTM 556
T NILL GF+ +G++ A E+F+ +++ RG K N+VTYSI I C++ +F DAL+LF M
Sbjct: 218 TMNILLLGFKESGDITAVELFYHEMVKRGFKLNSVTYSIRIDAYCKKGRFGDALKLFEEM 277
Query: 555 KKEGCQPDVQMYTALIYGLGRACKIRLAGQLFEEMEASGIKPDLIAYNALIVAFCRAKLV 376
+ C P V+ T LI+G G A I A +LF E+ +PD AYNAL+ + +++ V
Sbjct: 278 DRVNCLPTVETITTLIHGAGIARNISKAKELFNELFKRNFQPDTGAYNALLSSLTKSRDV 337
Query: 375 DEALGVMNEMKMKGVDCNSITYHRILFCLIEAWDTRKVKDLFYKMVSDGFTPRVFVVELL 196
A +M+EM+ K ++ +++TYH +L+ LI + D V DL+ +MV F P+ V +L
Sbjct: 338 KSAAVLMDEMEEKNIEFDNVTYHTMLWGLIRSNDVGGVIDLYERMVDKNFLPKARTVVML 397
Query: 195 MKFFVKLRRMNMAIQLWRYIISKGCCPHGYVTDYLVIKLCYRGNLQMAYDCCLHLAKRGK 16
MKFF + +R+++ + LW Y+++KG CPH + + LV LC RG ++ A++C + KRG+
Sbjct: 398 MKFFCENQRVDLGLSLWNYLMNKGHCPHCHSLEILVTGLCSRGRVEEAFECSEQMLKRGR 457
>gb|EMJ21852.1| hypothetical protein PRUPE_ppa003671mg [Prunus persica]
Length = 557
Score = 196 bits (498), Expect = 7e-48
Identities = 91/240 (37%), Positives = 149/240 (62%)
Frame = -1
Query: 735 TYNILLDGFRRAGNVVATEMFFRQLITRGIKPNNVTYSIMITGLCRRRKFRDALELFHTM 556
T NILL GF+ +G++ A E+F+ +L+ RG +PN +TY+I I C++ F D L LF M
Sbjct: 220 TMNILLLGFKESGDITAVELFYHELVKRGFEPNIITYNIRIDAYCKKGCFADGLRLFEGM 279
Query: 555 KKEGCQPDVQMYTALIYGLGRACKIRLAGQLFEEMEASGIKPDLIAYNALIVAFCRAKLV 376
++E P ++ T LI+G G A A QLF+E+ + PD YNAL+ + R++ V
Sbjct: 280 ERENLSPTLETITTLIHGAGVARNPIKAQQLFDEIRLRNLLPDTGVYNALMSSLIRSRDV 339
Query: 375 DEALGVMNEMKMKGVDCNSITYHRILFCLIEAWDTRKVKDLFYKMVSDGFTPRVFVVELL 196
A+ +M+EM++K ++ +++TYH + CL+ D V L++KMV F P+ V +L
Sbjct: 340 KSAVALMDEMEVKHIEHDNMTYHTMFSCLMRTSDIDGVSGLYHKMVDRSFVPKTRTVVML 399
Query: 195 MKFFVKLRRMNMAIQLWRYIISKGCCPHGYVTDYLVIKLCYRGNLQMAYDCCLHLAKRGK 16
MK+F +++++ + LWRY++ KGCCPHG+ D L+ LC R + A++C + +RG+
Sbjct: 400 MKYFCVNQQLDLGLHLWRYLVEKGCCPHGHALDLLLTGLCSRSRVIEAFECSKQMLERGR 459
>ref|XP_006359825.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g61360-like isoform X1 [Solanum tuberosum]
gi|565388118|ref|XP_006359826.1| PREDICTED:
pentatricopeptide repeat-containing protein
At3g61360-like isoform X2 [Solanum tuberosum]
gi|565388120|ref|XP_006359827.1| PREDICTED:
pentatricopeptide repeat-containing protein
At3g61360-like isoform X3 [Solanum tuberosum]
gi|565388122|ref|XP_006359828.1| PREDICTED:
pentatricopeptide repeat-containing protein
At3g61360-like isoform X4 [Solanum tuberosum]
Length = 504
Score = 195 bits (495), Expect = 2e-47
Identities = 95/240 (39%), Positives = 152/240 (63%)
Frame = -1
Query: 735 TYNILLDGFRRAGNVVATEMFFRQLITRGIKPNNVTYSIMITGLCRRRKFRDALELFHTM 556
T NILL GF+ +G++ A E+F+ +++ RG K N+VTYSI I C++ +F DAL+LF M
Sbjct: 218 TMNILLLGFKESGDITAVELFYHEMVKRGFKLNSVTYSIRIDAYCKKGRFGDALKLFEEM 277
Query: 555 KKEGCQPDVQMYTALIYGLGRACKIRLAGQLFEEMEASGIKPDLIAYNALIVAFCRAKLV 376
+ C P V+ T LI+G G A I A +LF E+ +PD AYNAL+ + +++ V
Sbjct: 278 DRVNCLPTVETITTLIHGAGIARNISKAKELFNEIFKRNFQPDTGAYNALLSSLIKSRDV 337
Query: 375 DEALGVMNEMKMKGVDCNSITYHRILFCLIEAWDTRKVKDLFYKMVSDGFTPRVFVVELL 196
A +M+EM+ K ++ +++TYH + + LI + D V DL+ +MV F P+ V +L
Sbjct: 338 KSAAVLMDEMEEKNIEFDNLTYHTMFWGLIRSNDVGGVIDLYERMVDKNFLPKARTVVML 397
Query: 195 MKFFVKLRRMNMAIQLWRYIISKGCCPHGYVTDYLVIKLCYRGNLQMAYDCCLHLAKRGK 16
MKFF + +R+++ + LW Y+++KG CPH + + LV LC RG ++ A++C + KRG+
Sbjct: 398 MKFFCENQRVDLGLSLWNYLMNKGHCPHCHSLEILVTGLCSRGKVEEAFECSEQMLKRGR 457
>ref|XP_006485771.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g61360-like [Citrus sinensis]
Length = 499
Score = 192 bits (488), Expect = 1e-46
Identities = 94/238 (39%), Positives = 147/238 (61%)
Frame = -1
Query: 735 TYNILLDGFRRAGNVVATEMFFRQLITRGIKPNNVTYSIMITGLCRRRKFRDALELFHTM 556
T NILL GF+ +G+V A EMF+ +++ RG +P+ VTY+I I G C++ F DA+ LF M
Sbjct: 214 TMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEM 273
Query: 555 KKEGCQPDVQMYTALIYGLGRACKIRLAGQLFEEMEASGIKPDLIAYNALIVAFCRAKLV 376
++ C P +Q T LI+G G I A QLF+EM +KPD+ AYNA+I + R + +
Sbjct: 274 ERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDL 333
Query: 375 DEALGVMNEMKMKGVDCNSITYHRILFCLIEAWDTRKVKDLFYKMVSDGFTPRVFVVELL 196
+ A+ +M+EM+ K + +++TYH + F L+++ V L+ +M+ F P+ V +L
Sbjct: 334 NAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVML 393
Query: 195 MKFFVKLRRMNMAIQLWRYIISKGCCPHGYVTDYLVIKLCYRGNLQMAYDCCLHLAKR 22
MKFF R+++ + LW Y+I +G CPHG+ D LV LC RG + A++C + R
Sbjct: 394 MKFFCVNCRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVR 451
>ref|XP_006440940.1| hypothetical protein CICLE_v10019823mg [Citrus clementina]
gi|557543202|gb|ESR54180.1| hypothetical protein
CICLE_v10019823mg [Citrus clementina]
Length = 500
Score = 192 bits (488), Expect = 1e-46
Identities = 94/238 (39%), Positives = 147/238 (61%)
Frame = -1
Query: 735 TYNILLDGFRRAGNVVATEMFFRQLITRGIKPNNVTYSIMITGLCRRRKFRDALELFHTM 556
T NILL GF+ +G+V A EMF+ +++ RG +P+ VTY+I I G C++ F DA+ LF M
Sbjct: 214 TMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEM 273
Query: 555 KKEGCQPDVQMYTALIYGLGRACKIRLAGQLFEEMEASGIKPDLIAYNALIVAFCRAKLV 376
++ C P +Q T LI+G G I A QLF+EM +KPD+ AYNA+I + R + +
Sbjct: 274 ERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDL 333
Query: 375 DEALGVMNEMKMKGVDCNSITYHRILFCLIEAWDTRKVKDLFYKMVSDGFTPRVFVVELL 196
+ A+ +M+EM+ K + +++TYH + F L+++ V L+ +M+ F P+ V +L
Sbjct: 334 NAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVML 393
Query: 195 MKFFVKLRRMNMAIQLWRYIISKGCCPHGYVTDYLVIKLCYRGNLQMAYDCCLHLAKR 22
MKFF R+++ + LW Y+I +G CPHG+ D LV LC RG + A++C + R
Sbjct: 394 MKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVR 451
>gb|EOY26249.1| Pentatricopeptide repeat-containing protein, putative [Theobroma
cacao]
Length = 512
Score = 191 bits (485), Expect = 2e-46
Identities = 91/240 (37%), Positives = 146/240 (60%)
Frame = -1
Query: 735 TYNILLDGFRRAGNVVATEMFFRQLITRGIKPNNVTYSIMITGLCRRRKFRDALELFHTM 556
T NILL GF+ +GNV A E+FF ++ RG KPN++TY+I I C++ D L L M
Sbjct: 224 TMNILLLGFKESGNVAAMELFFHDMVRRGFKPNSMTYNIRIDAYCKKGCLGDGLRLLEEM 283
Query: 555 KKEGCQPDVQMYTALIYGLGRACKIRLAGQLFEEMEASGIKPDLIAYNALIVAFCRAKLV 376
++ C P ++ T LI+G G A + A QLF+E+ ++PD+ AYNALI + R++ +
Sbjct: 284 EQVHCLPTLETITTLIHGAGVARNMPKAKQLFDEIPKRNLQPDVGAYNALISSLIRSRDI 343
Query: 375 DEALGVMNEMKMKGVDCNSITYHRILFCLIEAWDTRKVKDLFYKMVSDGFTPRVFVVELL 196
A+ +M+EM+ K ++ + +TYH + +++ V +L+YKM F P+ V +L
Sbjct: 344 KSAIELMDEMERKQIEHDGLTYHTMFLGMMKLSGIEGVCELYYKMTERNFIPKTPTVVML 403
Query: 195 MKFFVKLRRMNMAIQLWRYIISKGCCPHGYVTDYLVIKLCYRGNLQMAYDCCLHLAKRGK 16
MK+F + + +++ + LW Y++ KG CPH + D LV LC RG L A+ CC + +RG+
Sbjct: 404 MKYFCENQNLDLGLNLWDYLVEKGYCPHSHALDLLVTGLCSRGRLPEAFVCCKQMLERGR 463
>ref|XP_004308198.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g61360-like [Fragaria vesca subsp. vesca]
Length = 499
Score = 190 bits (483), Expect = 4e-46
Identities = 94/240 (39%), Positives = 141/240 (58%)
Frame = -1
Query: 735 TYNILLDGFRRAGNVVATEMFFRQLITRGIKPNNVTYSIMITGLCRRRKFRDALELFHTM 556
T NILL GF+ AG++ A E+F+ +L RG KPN++TY+I I C+R F DAL LF M
Sbjct: 221 TMNILLLGFKEAGDITAVELFYHELARRGFKPNSITYNIRIDAYCKRGCFADALRLFEEM 280
Query: 555 KKEGCQPDVQMYTALIYGLGRACKIRLAGQLFEEMEASGIKPDLIAYNALIVAFCRAKLV 376
++ P ++ T LI+G G A QLF+E+ + PD AYNAL+ + RAK V
Sbjct: 281 ERANLSPTLETITTLIHGAGVVRNPIKAQQLFDEIHLRNLLPDTGAYNALMSSLIRAKDV 340
Query: 375 DEALGVMNEMKMKGVDCNSITYHRILFCLIEAWDTRKVKDLFYKMVSDGFTPRVFVVELL 196
A+ +M+EM+ K + + +TYH + L+ DL+YKMV F P+ V +L
Sbjct: 341 QSAVALMDEMEEKHIKHDHMTYHTMFHGLMRTSGIEGASDLYYKMVDRNFVPKPRTVVML 400
Query: 195 MKFFVKLRRMNMAIQLWRYIISKGCCPHGYVTDYLVIKLCYRGNLQMAYDCCLHLAKRGK 16
+KFF + +++ + LW Y++ KG CPHG+ D L+ LC R A++C L + +RG+
Sbjct: 401 IKFFCENHHLDLGLHLWGYLVEKGYCPHGHALDLLLTALCSRSRTIEAFECSLQMLERGR 460
>ref|XP_002272860.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61360
[Vitis vinifera] gi|296081020|emb|CBI18524.3| unnamed
protein product [Vitis vinifera]
Length = 513
Score = 190 bits (482), Expect = 5e-46
Identities = 90/240 (37%), Positives = 148/240 (61%)
Frame = -1
Query: 735 TYNILLDGFRRAGNVVATEMFFRQLITRGIKPNNVTYSIMITGLCRRRKFRDALELFHTM 556
T NILL GF+ +G+V A E+F+ ++I RG KPN+VTY+I I C++ F D L L M
Sbjct: 222 TMNILLLGFKESGDVTAVELFYHEMIRRGFKPNSVTYNIRIDAYCKKGCFGDGLRLLEEM 281
Query: 555 KKEGCQPDVQMYTALIYGLGRACKIRLAGQLFEEMEASGIKPDLIAYNALIVAFCRAKLV 376
+K C P ++ T LI+G G A I A +LF E+ ++PD+ YNA + + R++ V
Sbjct: 282 EKANCPPTLETITTLIHGAGVAQNISRARELFNEISIRNLQPDIGVYNAFMSSLIRSREV 341
Query: 375 DEALGVMNEMKMKGVDCNSITYHRILFCLIEAWDTRKVKDLFYKMVSDGFTPRVFVVELL 196
AL +M+EM+ +G+ +S+TYH + L+ + V +L++KM+ F P+ + +L
Sbjct: 342 QSALMLMDEMEEEGIGHDSMTYHTMFRGLMRSNGIEGVSELYHKMIRRNFVPKTRTIVML 401
Query: 195 MKFFVKLRRMNMAIQLWRYIISKGCCPHGYVTDYLVIKLCYRGNLQMAYDCCLHLAKRGK 16
MK+F + +++++++ LW Y+I +G CPHG+ D LV LC G ++ A +C +RG+
Sbjct: 402 MKWFCQNQQLDLSLDLWGYLIDRGYCPHGHALDLLVTGLCSHGKVKEAVECAKQTLERGR 461
>emb|CAN75780.1| hypothetical protein VITISV_012424 [Vitis vinifera]
Length = 515
Score = 190 bits (482), Expect = 5e-46
Identities = 90/240 (37%), Positives = 148/240 (61%)
Frame = -1
Query: 735 TYNILLDGFRRAGNVVATEMFFRQLITRGIKPNNVTYSIMITGLCRRRKFRDALELFHTM 556
T NILL GF+ +G+V A E+F+ ++I RG KPN+VTY+I I C++ F D L L M
Sbjct: 222 TMNILLLGFKESGDVTAVELFYHEMIRRGFKPNSVTYNIRIDAYCKKGCFGDGLRLLEEM 281
Query: 555 KKEGCQPDVQMYTALIYGLGRACKIRLAGQLFEEMEASGIKPDLIAYNALIVAFCRAKLV 376
+K C P ++ T LI+G G A I A +LF E+ ++PD+ YNA + + R++ V
Sbjct: 282 EKANCPPTLETITTLIHGAGVAQNISRARELFNEISIRNLQPDIGVYNAFMSSLIRSREV 341
Query: 375 DEALGVMNEMKMKGVDCNSITYHRILFCLIEAWDTRKVKDLFYKMVSDGFTPRVFVVELL 196
AL +M+EM+ +G+ +S+TYH + L+ + V +L++KM+ F P+ + +L
Sbjct: 342 QSALMLMDEMEEEGIGHDSMTYHTMFRGLMRSNGIEGVSELYHKMIRRNFVPKTRTIVML 401
Query: 195 MKFFVKLRRMNMAIQLWRYIISKGCCPHGYVTDYLVIKLCYRGNLQMAYDCCLHLAKRGK 16
MK+F + +++++++ LW Y+I +G CPHG+ D LV LC G ++ A +C +RG+
Sbjct: 402 MKWFCQNQQLDLSLDLWGYLIDRGYCPHGHALDLLVTGLCSHGKVKEAVECAKQTLERGR 461
>ref|XP_004143709.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g61360-like [Cucumis sativus]
gi|449520004|ref|XP_004167024.1| PREDICTED:
pentatricopeptide repeat-containing protein
At3g61360-like [Cucumis sativus]
Length = 504
Score = 186 bits (472), Expect = 7e-45
Identities = 91/242 (37%), Positives = 143/242 (59%)
Frame = -1
Query: 741 VYTYNILLDGFRRAGNVVATEMFFRQLITRGIKPNNVTYSIMITGLCRRRKFRDALELFH 562
+ T N+LL GF+ + ++ + E+F+ ++I RG KPN VTYSI I C++ F D L +F
Sbjct: 218 IKTINLLLLGFKESSDITSVELFYHEMIKRGFKPNAVTYSIRIDAYCKKGCFVDGLRVFK 277
Query: 561 TMKKEGCQPDVQMYTALIYGLGRACKIRLAGQLFEEMEASGIKPDLIAYNALIVAFCRAK 382
M++ C+P ++ T LI+G G A QLF+E+ + PD+ AYNALI + R+
Sbjct: 278 EMERAKCEPTLETITTLIHGAGIVKDKTKARQLFDEIPLRNLCPDIGAYNALISSLIRSG 337
Query: 381 LVDEALGVMNEMKMKGVDCNSITYHRILFCLIEAWDTRKVKDLFYKMVSDGFTPRVFVVE 202
V A VM +M+ K ++ +S+TYH + LI D +L+ KMV F P+
Sbjct: 338 DVKSAASVMEDMEAKHIEHDSVTYHMMFSGLIRLEDVGGFYELYIKMVGRNFVPKTRTAV 397
Query: 201 LLMKFFVKLRRMNMAIQLWRYIISKGCCPHGYVTDYLVIKLCYRGNLQMAYDCCLHLAKR 22
++MKFF + RR+++ + W Y++ KG CPH +V D LV LC RG + A++C + +R
Sbjct: 398 MIMKFFCENRRVDLGLGFWAYLVEKGYCPHSHVLDLLVTGLCARGMVLQAFECSKQMLER 457
Query: 21 GK 16
G+
Sbjct: 458 GR 459
>ref|XP_006402489.1| hypothetical protein EUTSA_v10006474mg [Eutrema salsugineum]
gi|557103588|gb|ESQ43942.1| hypothetical protein
EUTSA_v10006474mg [Eutrema salsugineum]
Length = 498
Score = 186 bits (471), Expect = 9e-45
Identities = 93/244 (38%), Positives = 147/244 (60%), Gaps = 2/244 (0%)
Frame = -1
Query: 741 VYTYNILLDGFRRAGNVVATEMFFRQLITRGIKPNNVTYSIMITGLCRRRKFRDALELFH 562
V T NILL GF+ AG+V ATE+F+ +++ RG KPN+VTY I I G C++R F +AL LF
Sbjct: 211 VKTMNILLLGFKEAGDVTATELFYHEMVKRGFKPNSVTYGIRIDGFCKKRNFGEALRLFE 270
Query: 561 TMKKEGCQPDVQMYTALIYGLGRACKIRLAGQLFEEMEASGIKPDLIAYNALIVAFCRAK 382
M + + +Q+ T LI+G G A A QLF+E+ G+ PD AYNAL+ + + +
Sbjct: 271 EMDRRNLEATLQILTTLIHGSGVARNKIKARQLFDEIPKRGLTPDCGAYNALMSSLMKCR 330
Query: 381 LVDEALGVMNEMKMKGVDCNSITYHRILFCLIEA--WDTRKVKDLFYKMVSDGFTPRVFV 208
V A+ VM EM+ KG++ +S+T+H + ++++ + V +L++KM P+
Sbjct: 331 DVSGAIQVMKEMEEKGIEPDSVTFHSMFIGMMKSKEFGIDGVCELYHKMKERSLVPKTPT 390
Query: 207 VELLMKFFVKLRRMNMAIQLWRYIISKGCCPHGYVTDYLVIKLCYRGNLQMAYDCCLHLA 28
V +LMK F ++N+ + LW+Y++ KG CPHG+ + L LC R A++C
Sbjct: 391 VVMLMKLFCHNGQVNLGLDLWKYMLEKGYCPHGHALELLTTALCARRRANDAFECSRQTV 450
Query: 27 KRGK 16
+RG+
Sbjct: 451 ERGR 454
Score = 66.6 bits (161), Expect = 8e-09
Identities = 50/209 (23%), Positives = 87/209 (41%), Gaps = 1/209 (0%)
Frame = -1
Query: 627 YSIMITGLCRRRKFRDALELFHTMKKEGCQPDVQMYTALIYGLGRACKIRLAGQLFEEME 448
++I++ C R+ ++A +F + +PDV+ L+ G A + + EM
Sbjct: 180 FNILLRAFCTEREMKEARSIFEKLHSR-FKPDVKTMNILLLGFKEAGDVTATELFYHEMV 238
Query: 447 ASGIKPDLIAYNALIVAFCRAKLVDEALGVMNEMKMKGVDCNSITYHRILFCLIEAWDTR 268
G KP+ + Y I FC+ + EAL + EM + ++ ++ A +
Sbjct: 239 KRGFKPNSVTYGIRIDGFCKKRNFGEALRLFEEMDRRNLEATLQILTTLIHGSGVARNKI 298
Query: 267 KVKDLFYKMVSDGFTPRVFVVELLMKFFVKLRRMNMAIQLWRYIISKGCCPHGYVTDYLV 88
K + LF ++ G TP LM +K R ++ AIQ+ + + KG P +
Sbjct: 299 KARQLFDEIPKRGLTPDCGAYNALMSSLMKCRDVSGAIQVMKEMEEKGIEPDSVTFHSMF 358
Query: 87 IKLCYRGNLQMAYDCCL-HLAKRGKLPPK 4
I + + C L H K L PK
Sbjct: 359 IGMMKSKEFGIDGVCELYHKMKERSLVPK 387
>gb|EMT03355.1| hypothetical protein F775_02553 [Aegilops tauschii]
Length = 543
Score = 181 bits (458), Expect = 3e-43
Identities = 92/246 (37%), Positives = 142/246 (57%), Gaps = 1/246 (0%)
Frame = -1
Query: 735 TYNILLDGFRRAGNVVATEMFFRQLITRGIKPNNVTYSIMITGLCRRRKFRDALELFHTM 556
T+N LL GF+ AG+ A ++F+ + RG P+ V+Y + + C++ +F DAL+L M
Sbjct: 258 TFNTLLLGFKEAGHAQALDLFYHDAVLRGFVPDAVSYCVRMDAYCKKGRFLDALQLLDEM 317
Query: 555 KK-EGCQPDVQMYTALIYGLGRACKIRLAGQLFEEMEASGIKPDLIAYNALIVAFCRAKL 379
+K E C+P +Q++T LIYG G A LF+EME G+ PD A+NAL+ A+ RA+
Sbjct: 318 RKRENCKPTLQVFTTLIYGAGIVRDAARARLLFDEMEQCGVTPDRGAHNALMGAYVRARD 377
Query: 378 VDEALGVMNEMKMKGVDCNSITYHRILFCLIEAWDTRKVKDLFYKMVSDGFTPRVFVVEL 199
+ + +M+EM+ KG + +TY+ +L A D + ++ KM+ GF PR L
Sbjct: 378 LQSGMALMSEMEQKGFGLDDVTYNTMLCGFQRAGDLEGIWKIYSKMIGSGFMPRTRTTML 437
Query: 198 LMKFFVKLRRMNMAIQLWRYIISKGCCPHGYVTDYLVIKLCYRGNLQMAYDCCLHLAKRG 19
LMK F + R ++ ++LW Y+I KGC PH + D LV LC R + AY C L + G
Sbjct: 438 LMKVFCENGRPDLGLELWDYLIGKGCVPHRHALDVLVTGLCCRDVVGEAYRCFRELVEMG 497
Query: 18 KLPPKK 1
P ++
Sbjct: 498 MAPTER 503
>ref|NP_001058444.1| Os06g0694600 [Oryza sativa Japonica Group]
gi|53791827|dbj|BAD53893.1| pentatricopeptide
repeat-containing protein-like [Oryza sativa Japonica
Group] gi|53792848|dbj|BAD53881.1| pentatricopeptide
repeat-containing protein-like [Oryza sativa Japonica
Group] gi|113596484|dbj|BAF20358.1| Os06g0694600 [Oryza
sativa Japonica Group]
Length = 484
Score = 181 bits (458), Expect = 3e-43
Identities = 92/246 (37%), Positives = 143/246 (58%), Gaps = 1/246 (0%)
Frame = -1
Query: 735 TYNILLDGFRRAGNVVATEMFFRQLITRGIKPNNVTYSIMITGLCRRRKFRDALELFHTM 556
T+N LL GF+ AGN A ++F+ + RG P+ V+Y + + C++ +F DAL+L M
Sbjct: 199 TFNTLLLGFKEAGNAQALDLFYHDAVLRGFVPDAVSYCVRMDAYCKKGRFLDALDLLDEM 258
Query: 555 KK-EGCQPDVQMYTALIYGLGRACKIRLAGQLFEEMEASGIKPDLIAYNALIVAFCRAKL 379
+K E C+P +Q++T LIYG G A QLF+EM G+ PD A+NAL+ A+ RA+
Sbjct: 259 RKRENCRPTLQVFTTLIYGAGIVRNAIRARQLFDEMGQWGVTPDRGAHNALMGAYVRARD 318
Query: 378 VDEALGVMNEMKMKGVDCNSITYHRILFCLIEAWDTRKVKDLFYKMVSDGFTPRVFVVEL 199
+ + VM+EM+ KG+ + ++Y+ +L D + ++ KMV GF PR L
Sbjct: 319 LQSGMTVMSEMERKGIGLDDVSYNTMLCGFQRIGDLEGIWKVYSKMVGSGFMPRTRTTML 378
Query: 198 LMKFFVKLRRMNMAIQLWRYIISKGCCPHGYVTDYLVIKLCYRGNLQMAYDCCLHLAKRG 19
LMK F + R ++ ++LW Y++ KGC PH + D LV LC RG + AY C + + G
Sbjct: 379 LMKVFCENARPDLGLELWDYLLGKGCVPHRHALDVLVTGLCCRGVVLEAYRCFREMIEMG 438
Query: 18 KLPPKK 1
P ++
Sbjct: 439 MTPTER 444
>ref|XP_006290409.1| hypothetical protein CARUB_v10019081mg [Capsella rubella]
gi|482559116|gb|EOA23307.1| hypothetical protein
CARUB_v10019081mg [Capsella rubella]
Length = 495
Score = 179 bits (454), Expect = 9e-43
Identities = 93/244 (38%), Positives = 143/244 (58%), Gaps = 2/244 (0%)
Frame = -1
Query: 741 VYTYNILLDGFRRAGNVVATEMFFRQLITRGIKPNNVTYSIMITGLCRRRKFRDALELFH 562
V T NILL GF+ AG+V ATE+F+ +++ RG +PN+VTY I + G C++R F +AL LF
Sbjct: 207 VKTMNILLLGFKEAGDVTATELFYHEMVKRGFEPNSVTYGIRMDGFCKKRNFGEALRLFE 266
Query: 561 TMKKEGCQPDVQMYTALIYGLGRACKIRLAGQLFEEMEASGIKPDLIAYNALIVAFCRAK 382
M + VQ+ T LI+G G A A QLF+E+ G+ PD AYNAL+ + +
Sbjct: 267 DMDRRHFDITVQILTTLIHGSGVARNKIKARQLFDEIPKRGLTPDCGAYNALMSSLMKCG 326
Query: 381 LVDEALGVMNEMKMKGVDCNSITYHRILFCLIEA--WDTRKVKDLFYKMVSDGFTPRVFV 208
V A+ VM EM+ KG++ +S+T+H + ++++ + V + KM P+
Sbjct: 327 DVSGAVKVMKEMEEKGIEPDSVTFHSMFIGMMKSKEFGFEGVCVYYQKMKEVSLVPKTPT 386
Query: 207 VELLMKFFVKLRRMNMAIQLWRYIISKGCCPHGYVTDYLVIKLCYRGNLQMAYDCCLHLA 28
V +LMK F + +N+ + LW+YI+ KG CPHG+ D L LC R A++C +
Sbjct: 387 VVMLMKLFCQNGEVNLGLDLWKYILDKGYCPHGHALDLLTTALCARRRANDAFECSMQTV 446
Query: 27 KRGK 16
+RG+
Sbjct: 447 ERGR 450
>ref|XP_004966151.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g61360-like [Setaria italica]
Length = 485
Score = 179 bits (453), Expect = 1e-42
Identities = 91/246 (36%), Positives = 144/246 (58%), Gaps = 1/246 (0%)
Frame = -1
Query: 735 TYNILLDGFRRAGNVVATEMFFRQLITRGIKPNNVTYSIMITGLCRRRKFRDALELFHTM 556
T+N LL GF+ AG+ A ++F+ + RG P+ V+Y + + C++ +F DALEL M
Sbjct: 200 TFNTLLLGFKEAGHAQALDLFYHDAVLRGFVPDAVSYCVRMDAYCKKGRFADALELLDEM 259
Query: 555 KK-EGCQPDVQMYTALIYGLGRACKIRLAGQLFEEMEASGIKPDLIAYNALIVAFCRAKL 379
++ E C+P +Q++T LIYG G A LF+EME G+ PD A+NAL+ A+ RA+
Sbjct: 260 RRRENCKPTLQVFTTLIYGAGIVRNAARAQLLFDEMEKWGVTPDRGAHNALMGAYVRARD 319
Query: 378 VDEALGVMNEMKMKGVDCNSITYHRILFCLIEAWDTRKVKDLFYKMVSDGFTPRVFVVEL 199
+ A+ VM++M+ KGV + ++Y+ + + + ++ KMV+ GF PR L
Sbjct: 320 LKSAMAVMDKMERKGVGLDDVSYNTMFCGFQRVGNLEGIWKVYSKMVASGFMPRTRTTML 379
Query: 198 LMKFFVKLRRMNMAIQLWRYIISKGCCPHGYVTDYLVIKLCYRGNLQMAYDCCLHLAKRG 19
LMK F + R ++ ++LW YI+ KGC PH + D LV LC RG + AY C + + G
Sbjct: 380 LMKVFCENGRPDLGLELWDYIMGKGCVPHRHALDILVTGLCCRGVVSEAYRCFREIIEMG 439
Query: 18 KLPPKK 1
P ++
Sbjct: 440 MAPTER 445
>ref|NP_191695.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75264589|sp|Q9M2C8.1|PP291_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At3g61360 gi|6850903|emb|CAB71066.1| putative protein
[Arabidopsis thaliana] gi|25054868|gb|AAN71923.1|
unknown protein [Arabidopsis thaliana]
gi|332646669|gb|AEE80190.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 498
Score = 179 bits (453), Expect = 1e-42
Identities = 92/244 (37%), Positives = 142/244 (58%), Gaps = 2/244 (0%)
Frame = -1
Query: 741 VYTYNILLDGFRRAGNVVATEMFFRQLITRGIKPNNVTYSIMITGLCRRRKFRDALELFH 562
V T NILL GF+ AG+V ATE+F+ +++ RG KPN+VTY I I G C++R F +AL LF
Sbjct: 210 VKTMNILLLGFKEAGDVTATELFYHEMVKRGFKPNSVTYGIRIDGFCKKRNFGEALRLFE 269
Query: 561 TMKKEGCQPDVQMYTALIYGLGRACKIRLAGQLFEEMEASGIKPDLIAYNALIVAFCRAK 382
M + VQ+ T LI+G G A A QLF+E+ G+ PD AYNAL+ + +
Sbjct: 270 DMDRLDFDITVQILTTLIHGSGVARNKIKARQLFDEISKRGLTPDCGAYNALMSSLMKCG 329
Query: 381 LVDEALGVMNEMKMKGVDCNSITYHRILFCLIEA--WDTRKVKDLFYKMVSDGFTPRVFV 208
V A+ VM EM+ KG++ +S+T+H + ++++ + V + + KM P+
Sbjct: 330 DVSGAIKVMKEMEEKGIEPDSVTFHSMFIGMMKSKEFGFNGVCEYYQKMKERSLVPKTPT 389
Query: 207 VELLMKFFVKLRRMNMAIQLWRYIISKGCCPHGYVTDYLVIKLCYRGNLQMAYDCCLHLA 28
+ +LMK F +N+ + LW+Y++ KG CPHG+ + L LC R A++C
Sbjct: 390 IVMLMKLFCHNGEVNLGLDLWKYMLEKGYCPHGHALELLTTALCARRRANDAFECSWQTV 449
Query: 27 KRGK 16
+RG+
Sbjct: 450 ERGR 453
Score = 58.5 bits (140), Expect = 2e-06
Identities = 40/171 (23%), Positives = 72/171 (42%)
Frame = -1
Query: 627 YSIMITGLCRRRKFRDALELFHTMKKEGCQPDVQMYTALIYGLGRACKIRLAGQLFEEME 448
++I++ C R+ ++A +F + PDV+ L+ G A + + EM
Sbjct: 179 FNILLRAFCTEREMKEARSIFEKLHSR-FNPDVKTMNILLLGFKEAGDVTATELFYHEMV 237
Query: 447 ASGIKPDLIAYNALIVAFCRAKLVDEALGVMNEMKMKGVDCNSITYHRILFCLIEAWDTR 268
G KP+ + Y I FC+ + EAL + +M D ++ A +
Sbjct: 238 KRGFKPNSVTYGIRIDGFCKKRNFGEALRLFEDMDRLDFDITVQILTTLIHGSGVARNKI 297
Query: 267 KVKDLFYKMVSDGFTPRVFVVELLMKFFVKLRRMNMAIQLWRYIISKGCCP 115
K + LF ++ G TP LM +K ++ AI++ + + KG P
Sbjct: 298 KARQLFDEISKRGLTPDCGAYNALMSSLMKCGDVSGAIKVMKEMEEKGIEP 348
>gb|EXC35161.1| hypothetical protein L484_022712 [Morus notabilis]
Length = 548
Score = 178 bits (452), Expect = 1e-42
Identities = 87/238 (36%), Positives = 140/238 (58%)
Frame = -1
Query: 729 NILLDGFRRAGNVVATEMFFRQLITRGIKPNNVTYSIMITGLCRRRKFRDALELFHTMKK 550
NILL GF+ +G++ A E+F+ +++ RG +PN VTY+I I C+ D L L M++
Sbjct: 225 NILLSGFKESGDITAAELFYHEMVARGFRPNVVTYNIRIDAYCKAGCLGDGLRLLEEMEQ 284
Query: 549 EGCQPDVQMYTALIYGLGRACKIRLAGQLFEEMEASGIKPDLIAYNALIVAFCRAKLVDE 370
P ++ T LI+G G A + QLF+E+ + PD YNAL+ + R K +
Sbjct: 285 ANFSPTLETITTLIHGAGIARNLIKVQQLFQEIPFRNLHPDTGVYNALMSSLIRCKDLKS 344
Query: 369 ALGVMNEMKMKGVDCNSITYHRILFCLIEAWDTRKVKDLFYKMVSDGFTPRVFVVELLMK 190
A+ +M+EM+ K +D + +TYH + +I+ D V LF KMV + F P+ V +LMK
Sbjct: 345 AVALMDEMEEKHIDHDYMTYHIMFSGMIKKMDFEGVSHLFDKMVQNNFVPKTRTVVMLMK 404
Query: 189 FFVKLRRMNMAIQLWRYIISKGCCPHGYVTDYLVIKLCYRGNLQMAYDCCLHLAKRGK 16
FF R+++ + LW Y++ KG CPHG+ + L+ LC RG ++ A++C + +RG+
Sbjct: 405 FFCANSRVDLGLYLWEYLMGKGYCPHGHALELLLTGLCSRGFVKEAFECSKQVLERGR 462
Score = 62.0 bits (149), Expect = 2e-07
Identities = 42/180 (23%), Positives = 82/180 (45%)
Frame = -1
Query: 627 YSIMITGLCRRRKFRDALELFHTMKKEGCQPDVQMYTALIYGLGRACKIRLAGQLFEEME 448
++I++ C +R+ ++A +F M PD + L+ G + I A + EM
Sbjct: 190 FNILLRAFCTQRQMKEARSVFRKMYSR-FSPDKKSMNILLSGFKESGDITAAELFYHEMV 248
Query: 447 ASGIKPDLIAYNALIVAFCRAKLVDEALGVMNEMKMKGVDCNSITYHRILFCLIEAWDTR 268
A G +P+++ YN I A+C+A + + L ++ EM+ T ++ A +
Sbjct: 249 ARGFRPNVVTYNIRIDAYCKAGCLGDGLRLLEEMEQANFSPTLETITTLIHGAGIARNLI 308
Query: 267 KVKDLFYKMVSDGFTPRVFVVELLMKFFVKLRRMNMAIQLWRYIISKGCCPHGYVTDYLV 88
KV+ LF ++ P V LM ++ + + A+ L + K H Y+T +++
Sbjct: 309 KVQQLFQEIPFRNLHPDTGVYNALMSSLIRCKDLKSAVALMDEMEEKH-IDHDYMTYHIM 367
>ref|XP_002878376.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297324214|gb|EFH54635.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 498
Score = 177 bits (450), Expect = 3e-42
Identities = 90/244 (36%), Positives = 143/244 (58%), Gaps = 2/244 (0%)
Frame = -1
Query: 741 VYTYNILLDGFRRAGNVVATEMFFRQLITRGIKPNNVTYSIMITGLCRRRKFRDALELFH 562
V T NILL GF+ AG++ ATE+F+ +++ RG KPN+VTY I I G C++R F +AL LF
Sbjct: 210 VKTMNILLLGFKEAGDITATELFYHEMVKRGFKPNSVTYGIRIDGFCKKRNFGEALRLFE 269
Query: 561 TMKKEGCQPDVQMYTALIYGLGRACKIRLAGQLFEEMEASGIKPDLIAYNALIVAFCRAK 382
M ++ VQ+ T LI+G G A QLF+E+ G+ PD AYNAL+ + +
Sbjct: 270 DMDRQDIYITVQILTTLIHGSGVVRNKIKARQLFDEIPKRGLTPDCGAYNALMSSLMKCG 329
Query: 381 LVDEALGVMNEMKMKGVDCNSITYHRILFCLIEA--WDTRKVKDLFYKMVSDGFTPRVFV 208
V +A+ VM EM+ K ++ +S+T+H + ++++ + V + + KM P+
Sbjct: 330 DVSDAIKVMKEMEEKEIEPDSVTFHSMFIGMMKSKEFGFSGVCEYYQKMKERSLVPKTPT 389
Query: 207 VELLMKFFVKLRRMNMAIQLWRYIISKGCCPHGYVTDYLVIKLCYRGNLQMAYDCCLHLA 28
V +LMK F + +N+ + LW+Y++ KG CPHG+ + L LC R A++C
Sbjct: 390 VVMLMKLFCQNGEVNLGLDLWKYMLEKGYCPHGHALELLTTALCARRRANDAFECSRQTV 449
Query: 27 KRGK 16
+RG+
Sbjct: 450 ERGR 453