BLASTX nr result
ID: Ephedra28_contig00029262
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Ephedra28_contig00029262 (735 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AFW81758.1| hypothetical protein ZEAMMB73_033635 [Zea mays] 89 1e-15 ref|XP_004510105.1| PREDICTED: pentatricopeptide repeat-containi... 87 4e-15 gb|AFW85812.1| hypothetical protein ZEAMMB73_202457 [Zea mays] 87 4e-15 ref|XP_002521681.1| pentatricopeptide repeat-containing protein,... 87 4e-15 ref|XP_002436496.1| hypothetical protein SORBIDRAFT_10g003720 [S... 86 1e-14 ref|XP_006857185.1| hypothetical protein AMTR_s00065p00182300 [A... 84 5e-14 ref|XP_006389305.1| hypothetical protein POPTR_0030s00250g [Popu... 84 6e-14 ref|XP_002319048.1| predicted protein [Populus trichocarpa] 84 6e-14 ref|XP_002267809.2| PREDICTED: pentatricopeptide repeat-containi... 83 8e-14 ref|XP_002970273.1| hypothetical protein SELMODRAFT_411148 [Sela... 83 8e-14 ref|XP_006405989.1| hypothetical protein EUTSA_v10028308mg [Eutr... 83 1e-13 ref|XP_006300886.1| hypothetical protein CARUB_v10019976mg [Caps... 83 1e-13 gb|AAF75803.1|AC011000_6 Contains weak similarity to leaf protei... 83 1e-13 ref|NP_176481.2| pentatricopeptide repeat protein RPF3 [Arabidop... 83 1e-13 emb|CCD31439.1| RNA processing factor 3 [Arabidopsis thaliana] 83 1e-13 ref|XP_002978430.1| hypothetical protein SELMODRAFT_108734 [Sela... 83 1e-13 ref|XP_002970795.1| hypothetical protein SELMODRAFT_441332 [Sela... 82 1e-13 gb|AAM62704.1| unknown [Arabidopsis thaliana] 82 1e-13 ref|XP_004304863.1| PREDICTED: pentatricopeptide repeat-containi... 82 2e-13 ref|XP_004289096.1| PREDICTED: pentatricopeptide repeat-containi... 82 2e-13 >gb|AFW81758.1| hypothetical protein ZEAMMB73_033635 [Zea mays] Length = 691 Score = 89.0 bits (219), Expect = 1e-15 Identities = 45/137 (32%), Positives = 81/137 (59%) Frame = +1 Query: 325 LKSKTLSEAKDLYETIITTRRRPNFNTHHVLLRKFAKNTMKEDALKLFLFMKERGAFKPN 504 L +L+ A+ ++++++ PN T+++L+R +++AL + M+ G PN Sbjct: 126 LSDASLTSARRFFDSMLSDGVAPNVYTYNILIRALCGRGHRKEALSILRDMRGAGC-GPN 184 Query: 505 IITFNVLLADCSKTGELDMVERILELMTDHDLMPDRVTYDLMVRAFCSAGEHERACEIFT 684 ++T+N L+A + GE+D ER++ +M D L P+ VT++ MV C AG+ E A ++F Sbjct: 185 VVTYNTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNGMCKAGKMEDARKVFD 244 Query: 685 EMTSQEIGPDLVSFNIL 735 EM + + PD VS+N L Sbjct: 245 EMMREGLAPDGVSYNTL 261 Score = 72.0 bits (175), Expect = 2e-10 Identities = 38/115 (33%), Positives = 63/115 (54%) Frame = +1 Query: 391 PNFNTHHVLLRKFAKNTMKEDALKLFLFMKERGAFKPNIITFNVLLADCSKTGELDMVER 570 PN T++ L+ F + + A +L M + G KPN++TFN ++ K G+++ + Sbjct: 183 PNVVTYNTLVAAFFRAGEVDGAERLVGMMLD-GGLKPNLVTFNSMVNGMCKAGKMEDARK 241 Query: 571 ILELMTDHDLMPDRVTYDLMVRAFCSAGEHERACEIFTEMTSQEIGPDLVSFNIL 735 + + M L PD V+Y+ +V +C AG A +F EMT + I PD+V+F L Sbjct: 242 VFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSL 296 >ref|XP_004510105.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17670-like isoform X1 [Cicer arietinum] gi|502155526|ref|XP_004510106.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17670-like isoform X2 [Cicer arietinum] Length = 468 Score = 87.4 bits (215), Expect = 4e-15 Identities = 49/142 (34%), Positives = 79/142 (55%), Gaps = 4/142 (2%) Frame = +1 Query: 322 LLKSKTLSEAKDLYETIITTRRRPN-FNTHHVLLRKFAKNTMKEDALKLFLFM-KERGAF 495 L KS L EAK ++ +I+ + PN F H+ LL+ +A + D++ M K +F Sbjct: 60 LFKSPCLQEAKSIFNSIVKSSNVPNDFRFHNSLLQSYASVSTINDSIAFLRHMTKTHPSF 119 Query: 496 KPNIITFNVLLADCSKTGE--LDMVERILELMTDHDLMPDRVTYDLMVRAFCSAGEHERA 669 P+ T+++LL K+ + L + + L LM + PD+VT DL VR+ CSAG + A Sbjct: 120 TPDKSTYHILLTQSCKSTDTTLSQIHQTLNLMVSDGVSPDKVTVDLAVRSLCSAGRMDEA 179 Query: 670 CEIFTEMTSQEIGPDLVSFNIL 735 E+ E++S+ PD+ +FN L Sbjct: 180 VELIKELSSKHCSPDIYTFNFL 201 Score = 62.0 bits (149), Expect = 2e-07 Identities = 35/142 (24%), Positives = 70/142 (49%) Frame = +1 Query: 310 LTQQLLKSKTLSEAKDLYETIITTRRRPNFNTHHVLLRKFAKNTMKEDALKLFLFMKERG 489 L + +K L E L + + + ++ +++ + K +A++++ MKE G Sbjct: 237 LIDNVCNAKNLRETLSLMSVLDEEGFKLDCYAYNTIMKGYCKMGRGNEAIEVYNKMKEAG 296 Query: 490 AFKPNIITFNVLLADCSKTGELDMVERILELMTDHDLMPDRVTYDLMVRAFCSAGEHERA 669 +P++IT+N L+ SK+G + +++L +M + PD VTY ++ C GE A Sbjct: 297 V-EPDLITYNTLIYGLSKSGRVMEAKKLLRVMAEKGHFPDEVTYTSLMNGLCRKGEILSA 355 Query: 670 CEIFTEMTSQEIGPDLVSFNIL 735 + EM + P+ ++N L Sbjct: 356 IALLEEMEAIGCSPNSCTYNTL 377 Score = 57.4 bits (137), Expect = 5e-06 Identities = 27/140 (19%), Positives = 64/140 (45%) Frame = +1 Query: 316 QQLLKSKTLSEAKDLYETIITTRRRPNFNTHHVLLRKFAKNTMKEDALKLFLFMKERGAF 495 + L + + EA +L + + + P+ T + L++ K + M+ + Sbjct: 168 RSLCSAGRMDEAVELIKELSSKHCSPDIYTFNFLVKHLCKCLTLSTLYSFIIEMRSKFGV 227 Query: 496 KPNIITFNVLLADCSKTGELDMVERILELMTDHDLMPDRVTYDLMVRAFCSAGEHERACE 675 KP+++TF +L+ + L ++ ++ + D Y+ +++ +C G A E Sbjct: 228 KPDLVTFTILIDNVCNAKNLRETLSLMSVLDEEGFKLDCYAYNTIMKGYCKMGRGNEAIE 287 Query: 676 IFTEMTSQEIGPDLVSFNIL 735 ++ +M + PDL+++N L Sbjct: 288 VYNKMKEAGVEPDLITYNTL 307 >gb|AFW85812.1| hypothetical protein ZEAMMB73_202457 [Zea mays] Length = 731 Score = 87.4 bits (215), Expect = 4e-15 Identities = 44/137 (32%), Positives = 81/137 (59%) Frame = +1 Query: 325 LKSKTLSEAKDLYETIITTRRRPNFNTHHVLLRKFAKNTMKEDALKLFLFMKERGAFKPN 504 L +L+ A+ ++++++ PN T+++L+R +++AL + M+ G PN Sbjct: 166 LSDASLTSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSILRDMRGAGC-GPN 224 Query: 505 IITFNVLLADCSKTGELDMVERILELMTDHDLMPDRVTYDLMVRAFCSAGEHERACEIFT 684 ++T+N L+A + GE+D ER++ +M + L P+ VT++ MV C AG+ E A ++F Sbjct: 225 VVTYNTLVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNGMCKAGKMEDARKVFD 284 Query: 685 EMTSQEIGPDLVSFNIL 735 EM + + PD VS+N L Sbjct: 285 EMVREGLAPDGVSYNTL 301 Score = 75.1 bits (183), Expect = 2e-11 Identities = 39/115 (33%), Positives = 64/115 (55%) Frame = +1 Query: 391 PNFNTHHVLLRKFAKNTMKEDALKLFLFMKERGAFKPNIITFNVLLADCSKTGELDMVER 570 PN T++ L+ F + + A +L M+E G KPN++TFN ++ K G+++ + Sbjct: 223 PNVVTYNTLVAAFFRAGEVDGAERLVGMMRE-GGLKPNLVTFNSMVNGMCKAGKMEDARK 281 Query: 571 ILELMTDHDLMPDRVTYDLMVRAFCSAGEHERACEIFTEMTSQEIGPDLVSFNIL 735 + + M L PD V+Y+ +V +C AG A +F EMT + I PD+V+F L Sbjct: 282 VFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSL 336 >ref|XP_002521681.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] gi|223539072|gb|EEF40668.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] Length = 458 Score = 87.4 bits (215), Expect = 4e-15 Identities = 49/144 (34%), Positives = 86/144 (59%), Gaps = 4/144 (2%) Frame = +1 Query: 316 QQLLKSKTLSEAKDLYETIITTRRRP-NFNTHHVLLRKFAKNTMKEDALKLFLFM-KERG 489 ++L KS L+EAK+++ ++I+T R P + HH L+ ++ + +D++ L M K Sbjct: 52 KRLFKSPELNEAKEIFNSLISTTRVPLDLRFHHSFLQSYSSISTIDDSISLLRHMIKTLP 111 Query: 490 AFKPNIITFNVLLADCSKTGE--LDMVERILELMTDHDLMPDRVTYDLMVRAFCSAGEHE 663 +F P I T+++LL+ K + L V +IL LM ++ MP +VT D+ VRA CSAG+ + Sbjct: 112 SFTPTISTYHILLSQSCKAPDPTLSPVHQILNLMVNNGFMPTQVTVDIAVRALCSAGKED 171 Query: 664 RACEIFTEMTSQEIGPDLVSFNIL 735 A ++ E++ + PD ++N L Sbjct: 172 DAVKLVKELSLKHSKPDSFTYNFL 195 Score = 67.4 bits (163), Expect = 5e-09 Identities = 38/142 (26%), Positives = 71/142 (50%) Frame = +1 Query: 310 LTQQLLKSKTLSEAKDLYETIITTRRRPNFNTHHVLLRKFAKNTMKEDALKLFLFMKERG 489 L + SK L EA L + +P+ ++ +++ + + DA+++F MKE G Sbjct: 231 LIDNVCNSKNLREAMRLLGILRECGFKPDCFVYNTIMKGYCMLSKGSDAIQVFKKMKEEG 290 Query: 490 AFKPNIITFNVLLADCSKTGELDMVERILELMTDHDLMPDRVTYDLMVRAFCSAGEHERA 669 +P++IT+N L+ SK G + +R L++M + PD VTY ++ C G+ A Sbjct: 291 -IEPDLITYNTLIFGLSKGGRVSEAKRYLKIMVESGHFPDAVTYTSLMNGLCRKGDALGA 349 Query: 670 CEIFTEMTSQEIGPDLVSFNIL 735 + +M + P+ ++N L Sbjct: 350 LALLEDMEMKGCSPNSCTYNTL 371 >ref|XP_002436496.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor] gi|241914719|gb|EER87863.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor] Length = 698 Score = 86.3 bits (212), Expect = 1e-14 Identities = 43/137 (31%), Positives = 79/137 (57%) Frame = +1 Query: 325 LKSKTLSEAKDLYETIITTRRRPNFNTHHVLLRKFAKNTMKEDALKLFLFMKERGAFKPN 504 L +L A+ ++++++ PN T+++L+R +++AL + M+ G PN Sbjct: 133 LSDASLPSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSVLRDMRGAGC-DPN 191 Query: 505 IITFNVLLADCSKTGELDMVERILELMTDHDLMPDRVTYDLMVRAFCSAGEHERACEIFT 684 +T+N L+A + GE+D ER++++M + L P+ VT++ +V C AG E A ++F Sbjct: 192 AVTYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNGICKAGRMEDARKVFD 251 Query: 685 EMTSQEIGPDLVSFNIL 735 EM + + PD VS+N L Sbjct: 252 EMVKEGLAPDGVSYNTL 268 Score = 72.8 bits (177), Expect = 1e-10 Identities = 38/115 (33%), Positives = 62/115 (53%) Frame = +1 Query: 391 PNFNTHHVLLRKFAKNTMKEDALKLFLFMKERGAFKPNIITFNVLLADCSKTGELDMVER 570 PN T++ L+ F + + A +L M+E G KPN++TFN ++ K G ++ + Sbjct: 190 PNAVTYNTLVAAFCRAGEVDRAERLVDMMRE-GGLKPNLVTFNSVVNGICKAGRMEDARK 248 Query: 571 ILELMTDHDLMPDRVTYDLMVRAFCSAGEHERACEIFTEMTSQEIGPDLVSFNIL 735 + + M L PD V+Y+ +V +C G A +F EMT + I PD+V+F L Sbjct: 249 VFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDVVTFTSL 303 Score = 58.9 bits (141), Expect = 2e-06 Identities = 36/132 (27%), Positives = 62/132 (46%) Frame = +1 Query: 340 LSEAKDLYETIITTRRRPNFNTHHVLLRKFAKNTMKEDALKLFLFMKERGAFKPNIITFN 519 + EA++L + +P+ T+ +L + KN A +L M E G P+ IT++ Sbjct: 383 MDEARELVREMEAKGVKPDVVTYSTILSAYCKNGDTHSAFQLNQQMLENGVL-PDAITYS 441 Query: 520 VLLADCSKTGELDMVERILELMTDHDLMPDRVTYDLMVRAFCSAGEHERACEIFTEMTSQ 699 L+ + L + + M L PD VTY ++ C G ERA + EM Sbjct: 442 SLIRVLCEEKRLGDAHVLFKNMISLGLQPDEVTYTSLIDGHCKEGNVERALSLHDEMVKA 501 Query: 700 EIGPDLVSFNIL 735 + PD+V++++L Sbjct: 502 GVLPDVVTYSVL 513 >ref|XP_006857185.1| hypothetical protein AMTR_s00065p00182300 [Amborella trichopoda] gi|548861268|gb|ERN18652.1| hypothetical protein AMTR_s00065p00182300 [Amborella trichopoda] Length = 470 Score = 84.0 bits (206), Expect = 5e-14 Identities = 50/151 (33%), Positives = 77/151 (50%), Gaps = 8/151 (5%) Frame = +1 Query: 307 ELTQQLLKSKTLSEAKDLYETIITTRRRPNFNT-HHVLLRKFAK-NTMKEDALKLFLFMK 480 +L L K+ ++SEAK Y+ + R H+ LL+ F ++L L MK Sbjct: 63 KLPLNLFKTPSISEAKATYDAALAARGHTRSTPFHNALLKDFCLLRPNLPNSLSLVHHMK 122 Query: 481 ERGAFKPNIITFNVLLADCSKTGELDMVERILELMTDHDLMPDRVTYDLMVRAFCSAGEH 660 E+ F P+ TFN++L C ++ V + L LMT PD V+ DL+VRA CS+ Sbjct: 123 EKSGFAPDHATFNIILGLCCSNADMAAVHQTLALMTASGFPPDNVSCDLIVRALCSSALE 182 Query: 661 ERACEIFTEMTSQEI------GPDLVSFNIL 735 + ACE+F ++ S + PD+ +FN L Sbjct: 183 DEACELFKDIASSNLKSRSSSPPDMFTFNFL 213 Score = 62.0 bits (149), Expect = 2e-07 Identities = 34/142 (23%), Positives = 70/142 (49%) Frame = +1 Query: 310 LTQQLLKSKTLSEAKDLYETIITTRRRPNFNTHHVLLRKFAKNTMKEDALKLFLFMKERG 489 L + +SK L EA L + +P+ ++ +++ + +A+ ++ M+E G Sbjct: 248 LIDAVCRSKNLREATRLLGVLGEAGYKPDCFLYNTIMKGYCLLDRGAEAITVYKKMREEG 307 Query: 490 AFKPNIITFNVLLADCSKTGELDMVERILELMTDHDLMPDRVTYDLMVRAFCSAGEHERA 669 +P+++T+N L+ S G+ D+ + L +M + +PD VTY ++ C G A Sbjct: 308 C-EPDLVTYNTLIYGLSNAGKEDIAMKYLRVMVEEGHLPDTVTYTSLMNGMCRKGNATGA 366 Query: 670 CEIFTEMTSQEIGPDLVSFNIL 735 E+ EM + P+ +++ L Sbjct: 367 LELLKEMEDRGCEPNSCTYSTL 388 >ref|XP_006389305.1| hypothetical protein POPTR_0030s00250g [Populus trichocarpa] gi|550312065|gb|ERP48219.1| hypothetical protein POPTR_0030s00250g [Populus trichocarpa] Length = 611 Score = 83.6 bits (205), Expect = 6e-14 Identities = 44/142 (30%), Positives = 80/142 (56%) Frame = +1 Query: 310 LTQQLLKSKTLSEAKDLYETIITTRRRPNFNTHHVLLRKFAKNTMKEDALKLFLFMKERG 489 L L K + EA+ ++ET+I PN NT++ L+ + + ++A KLF M +G Sbjct: 307 LVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLFNIMVRKG 366 Query: 490 AFKPNIITFNVLLADCSKTGELDMVERILELMTDHDLMPDRVTYDLMVRAFCSAGEHERA 669 P++ ++N+L+ K+G +D + +L M+ L PD VTY +++ FC G + A Sbjct: 367 C-APSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDA 425 Query: 670 CEIFTEMTSQEIGPDLVSFNIL 735 ++ EM S + PDL++++I+ Sbjct: 426 QKLLEEMRSYGLLPDLMTYSIV 447 Score = 68.6 bits (166), Expect = 2e-09 Identities = 37/136 (27%), Positives = 74/136 (54%) Frame = +1 Query: 328 KSKTLSEAKDLYETIITTRRRPNFNTHHVLLRKFAKNTMKEDALKLFLFMKERGAFKPNI 507 KS + EAK L + P+ T+ L++ F ++ +DA KL M+ G P++ Sbjct: 383 KSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLL-PDL 441 Query: 508 ITFNVLLADCSKTGELDMVERILELMTDHDLMPDRVTYDLMVRAFCSAGEHERACEIFTE 687 +T++++L K G LD +L+ M + + P+ Y ++++ C+ G+ E A E+F+ Sbjct: 442 MTYSIVLDGLCKQGHLDEAFELLKAMQESKIEPNIFIYTILIQGMCNFGKLEAARELFSN 501 Query: 688 MTSQEIGPDLVSFNIL 735 + + I PD+V++ ++ Sbjct: 502 LFVKGIQPDVVTYTVM 517 Score = 67.8 bits (164), Expect = 4e-09 Identities = 39/142 (27%), Positives = 69/142 (48%) Frame = +1 Query: 310 LTQQLLKSKTLSEAKDLYETIITTRRRPNFNTHHVLLRKFAKNTMKEDALKLFLFMKERG 489 + L K K ++EA + ++ PN T+ +L F +A LF M ER Sbjct: 237 IIDSLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVERN 296 Query: 490 AFKPNIITFNVLLADCSKTGELDMVERILELMTDHDLMPDRVTYDLMVRAFCSAGEHERA 669 P+ +TFN+L+ SK G + + + E M + + P+ TY+ ++ +CS + + A Sbjct: 297 VM-PDTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEA 355 Query: 670 CEIFTEMTSQEIGPDLVSFNIL 735 ++F M + P + S+NIL Sbjct: 356 QKLFNIMVRKGCAPSVRSYNIL 377 Score = 65.1 bits (157), Expect = 2e-08 Identities = 35/136 (25%), Positives = 67/136 (49%) Frame = +1 Query: 328 KSKTLSEAKDLYETIITTRRRPNFNTHHVLLRKFAKNTMKEDALKLFLFMKERGAFKPNI 507 K+K + K L++ ++ P+ T+ ++ K A++L M+E+G KPN+ Sbjct: 174 KAKIIDAVK-LFDEMVKMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKMEEKGC-KPNV 231 Query: 508 ITFNVLLADCSKTGELDMVERILELMTDHDLMPDRVTYDLMVRAFCSAGEHERACEIFTE 687 + ++ ++ K + L M + + P+ VTY ++ FC+ G A +F + Sbjct: 232 VVYSTIIDSLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQ 291 Query: 688 MTSQEIGPDLVSFNIL 735 M + + PD V+FNIL Sbjct: 292 MVERNVMPDTVTFNIL 307 >ref|XP_002319048.1| predicted protein [Populus trichocarpa] Length = 497 Score = 83.6 bits (205), Expect = 6e-14 Identities = 44/142 (30%), Positives = 80/142 (56%) Frame = +1 Query: 310 LTQQLLKSKTLSEAKDLYETIITTRRRPNFNTHHVLLRKFAKNTMKEDALKLFLFMKERG 489 L L K + EA+ ++ET+I PN NT++ L+ + + ++A KLF M +G Sbjct: 193 LVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLFNIMVRKG 252 Query: 490 AFKPNIITFNVLLADCSKTGELDMVERILELMTDHDLMPDRVTYDLMVRAFCSAGEHERA 669 P++ ++N+L+ K+G +D + +L M+ L PD VTY +++ FC G + A Sbjct: 253 C-APSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDA 311 Query: 670 CEIFTEMTSQEIGPDLVSFNIL 735 ++ EM S + PDL++++I+ Sbjct: 312 QKLLEEMRSYGLLPDLMTYSIV 333 Score = 68.6 bits (166), Expect = 2e-09 Identities = 37/136 (27%), Positives = 74/136 (54%) Frame = +1 Query: 328 KSKTLSEAKDLYETIITTRRRPNFNTHHVLLRKFAKNTMKEDALKLFLFMKERGAFKPNI 507 KS + EAK L + P+ T+ L++ F ++ +DA KL M+ G P++ Sbjct: 269 KSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLL-PDL 327 Query: 508 ITFNVLLADCSKTGELDMVERILELMTDHDLMPDRVTYDLMVRAFCSAGEHERACEIFTE 687 +T++++L K G LD +L+ M + + P+ Y ++++ C+ G+ E A E+F+ Sbjct: 328 MTYSIVLDGLCKQGHLDEAFELLKAMQESKIEPNIFIYTILIQGMCNFGKLEAARELFSN 387 Query: 688 MTSQEIGPDLVSFNIL 735 + + I PD+V++ ++ Sbjct: 388 LFVKGIQPDVVTYTVM 403 Score = 67.8 bits (164), Expect = 4e-09 Identities = 39/142 (27%), Positives = 69/142 (48%) Frame = +1 Query: 310 LTQQLLKSKTLSEAKDLYETIITTRRRPNFNTHHVLLRKFAKNTMKEDALKLFLFMKERG 489 + L K K ++EA + ++ PN T+ +L F +A LF M ER Sbjct: 123 IIDSLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVERN 182 Query: 490 AFKPNIITFNVLLADCSKTGELDMVERILELMTDHDLMPDRVTYDLMVRAFCSAGEHERA 669 P+ +TFN+L+ SK G + + + E M + + P+ TY+ ++ +CS + + A Sbjct: 183 VM-PDTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEA 241 Query: 670 CEIFTEMTSQEIGPDLVSFNIL 735 ++F M + P + S+NIL Sbjct: 242 QKLFNIMVRKGCAPSVRSYNIL 263 Score = 65.1 bits (157), Expect = 2e-08 Identities = 35/136 (25%), Positives = 67/136 (49%) Frame = +1 Query: 328 KSKTLSEAKDLYETIITTRRRPNFNTHHVLLRKFAKNTMKEDALKLFLFMKERGAFKPNI 507 K+K + K L++ ++ P+ T+ ++ K A++L M+E+G KPN+ Sbjct: 60 KAKIIDAVK-LFDEMVKMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKMEEKGC-KPNV 117 Query: 508 ITFNVLLADCSKTGELDMVERILELMTDHDLMPDRVTYDLMVRAFCSAGEHERACEIFTE 687 + ++ ++ K + L M + + P+ VTY ++ FC+ G A +F + Sbjct: 118 VVYSTIIDSLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQ 177 Query: 688 MTSQEIGPDLVSFNIL 735 M + + PD V+FNIL Sbjct: 178 MVERNVMPDTVTFNIL 193 >ref|XP_002267809.2| PREDICTED: pentatricopeptide repeat-containing protein At2g17670-like [Vitis vinifera] Length = 458 Score = 83.2 bits (204), Expect = 8e-14 Identities = 47/142 (33%), Positives = 77/142 (54%), Gaps = 4/142 (2%) Frame = +1 Query: 322 LLKSKTLSEAKDLYETIITTRRRP-NFNTHHVLLRKFAKNTMKEDALKLFLFM-KERGAF 495 + S L +AK L+ +I TT P +F H+ LL+ ++ + D++ M K + +F Sbjct: 136 IFNSPNLLDAKKLFASITTTSTTPLDFRFHNALLQSYSSISTVNDSISFLRHMIKSQPSF 195 Query: 496 KPNIITFNVLLADCSKT--GELDMVERILELMTDHDLMPDRVTYDLMVRAFCSAGEHERA 669 P T+++LL+ K+ +L V + L LM H PDRVT D+ VR+ CSAG E A Sbjct: 196 SPERSTYHILLSQSCKSPNSDLSAVHQTLNLMVTHGFPPDRVTTDIAVRSLCSAGREEHA 255 Query: 670 CEIFTEMTSQEIGPDLVSFNIL 735 E+ E++ + PD ++N + Sbjct: 256 IELVKELSLKHSPPDSFTYNFI 277 >ref|XP_002970273.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii] gi|300161789|gb|EFJ28403.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii] Length = 831 Score = 83.2 bits (204), Expect = 8e-14 Identities = 44/138 (31%), Positives = 75/138 (54%) Frame = +1 Query: 322 LLKSKTLSEAKDLYETIITTRRRPNFNTHHVLLRKFAKNTMKEDALKLFLFMKERGAFKP 501 L++ +++A+ +YE ++ P+ T+ L+ F+ + A +LF M RG +P Sbjct: 527 LMRKGRIADAQGVYEEMVAAGCSPDVITYSTLIHGFSLARKHDQAHELFETMISRGC-RP 585 Query: 502 NIITFNVLLADCSKTGELDMVERILELMTDHDLMPDRVTYDLMVRAFCSAGEHERACEIF 681 N +T+N LL K + D + M + PDRVTY ++ FC+ G+ E+A E+F Sbjct: 586 NAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDRVTYTTLLYGFCNVGKIEQAVEVF 645 Query: 682 TEMTSQEIGPDLVSFNIL 735 EM S+ PD+V++N L Sbjct: 646 DEMVSKGHDPDVVAYNCL 663 Score = 74.3 bits (181), Expect = 4e-11 Identities = 42/130 (32%), Positives = 71/130 (54%) Frame = +1 Query: 346 EAKDLYETIITTRRRPNFNTHHVLLRKFAKNTMKEDALKLFLFMKERGAFKPNIITFNVL 525 +A +L+ET+I+ RPN T++ LL K + ++A +LF M ERG P+ +T+ L Sbjct: 570 QAHELFETMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGC-DPDRVTYTTL 628 Query: 526 LADCSKTGELDMVERILELMTDHDLMPDRVTYDLMVRAFCSAGEHERACEIFTEMTSQEI 705 L G+++ + + M PD V Y+ +++ F AG+ A ++F M S++ Sbjct: 629 LYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEAKQLFQVMVSRQC 688 Query: 706 GPDLVSFNIL 735 PD VS NI+ Sbjct: 689 KPDTVSHNIM 698 Score = 62.8 bits (151), Expect = 1e-07 Identities = 35/133 (26%), Positives = 68/133 (51%), Gaps = 1/133 (0%) Frame = +1 Query: 340 LSEAKDLYETIITTRRRPNFNTHHVLLRKFAKNTMKEDALKLFLFMKERGAFKPNIITFN 519 + +A ++++ +++ P+ ++ LL+ F + +A +LF M R KP+ ++ N Sbjct: 638 IEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEAKQLFQVMVSRQC-KPDTVSHN 696 Query: 520 VLLADCSKTGELDMVERILELMT-DHDLMPDRVTYDLMVRAFCSAGEHERACEIFTEMTS 696 +++ SK LD + E M DH PD VTY+ ++ C A ++F E+ Sbjct: 697 IMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEAMKVFKEIDR 756 Query: 697 QEIGPDLVSFNIL 735 ++ PD +FN+L Sbjct: 757 LKLSPDPHAFNVL 769 Score = 61.2 bits (147), Expect = 3e-07 Identities = 39/143 (27%), Positives = 71/143 (49%), Gaps = 1/143 (0%) Frame = +1 Query: 310 LTQQLLKSKTLSEAKDLYETIITTRRR-PNFNTHHVLLRKFAKNTMKEDALKLFLFMKER 486 L L K+K + +A ++ T+++ R P+ ++ +L+ F K A KL+ M + Sbjct: 452 LLNSLCKAKKVHQAFAIFSTMVSERSFVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDL 511 Query: 487 GAFKPNIITFNVLLADCSKTGELDMVERILELMTDHDLMPDRVTYDLMVRAFCSAGEHER 666 PN+ T+N L + G + + + E M PD +TY ++ F A +H++ Sbjct: 512 NCV-PNVTTYNAFLNGLMRKGRIADAQGVYEEMVAAGCSPDVITYSTLIHGFSLARKHDQ 570 Query: 667 ACEIFTEMTSQEIGPDLVSFNIL 735 A E+F M S+ P+ V++N L Sbjct: 571 AHELFETMISRGCRPNAVTYNCL 593 >ref|XP_006405989.1| hypothetical protein EUTSA_v10028308mg [Eutrema salsugineum] gi|557107127|gb|ESQ47442.1| hypothetical protein EUTSA_v10028308mg [Eutrema salsugineum] Length = 823 Score = 82.8 bits (203), Expect = 1e-13 Identities = 44/142 (30%), Positives = 77/142 (54%) Frame = +1 Query: 310 LTQQLLKSKTLSEAKDLYETIITTRRRPNFNTHHVLLRKFAKNTMKEDALKLFLFMKERG 489 L +K SEA+DLYE ++ PN T++ ++ F K ++A ++F M +G Sbjct: 339 LISAFVKEVKFSEAEDLYEEMLHRGIVPNAITYNSMIDGFCKKNRLDEAKQMFDSMASKG 398 Query: 490 AFKPNIITFNVLLADCSKTGELDMVERILELMTDHDLMPDRVTYDLMVRAFCSAGEHERA 669 P+++TFN L+ C +T +D +L MT ++ D VT++ ++ F G+ Sbjct: 399 C-SPDVVTFNTLIDGCCRTKRIDDGMDLLHEMTRRRIVADTVTFNTLIHGFFQVGDLNGV 457 Query: 670 CEIFTEMTSQEIGPDLVSFNIL 735 +IF EMTS ++ P++V+ N L Sbjct: 458 LDIFQEMTSTDVRPNIVTLNTL 479 Score = 76.3 bits (186), Expect = 1e-11 Identities = 38/142 (26%), Positives = 76/142 (53%) Frame = +1 Query: 310 LTQQLLKSKTLSEAKDLYETIITTRRRPNFNTHHVLLRKFAKNTMKEDALKLFLFMKERG 489 L +K + SEA++LYE ++ P+ T++ ++ F K ++A ++F M G Sbjct: 525 LISAFVKERKFSEAEELYEKMLHRGIVPDTITYNSMINGFCKQNRLDEAKQMFDLMVSNG 584 Query: 490 AFKPNIITFNVLLADCSKTGELDMVERILELMTDHDLMPDRVTYDLMVRAFCSAGEHERA 669 +++T+N L+ C +T +D +L M+ ++ + VTY+ ++ C G+ A Sbjct: 585 C-SSDVVTYNTLIDGCCRTKRVDDGMDLLHEMSRRQIVANTVTYNTLIHGLCQVGDLNAA 643 Query: 670 CEIFTEMTSQEIGPDLVSFNIL 735 ++F M S + PD++++NIL Sbjct: 644 QDLFLNMNSHGVCPDILTYNIL 665 Score = 67.4 bits (163), Expect = 5e-09 Identities = 40/142 (28%), Positives = 72/142 (50%) Frame = +1 Query: 310 LTQQLLKSKTLSEAKDLYETIITTRRRPNFNTHHVLLRKFAKNTMKEDALKLFLFMKERG 489 + +L K L +A++L+ + PN T++ ++ F N DA +L M +R Sbjct: 269 IIDRLCKDGRLVDAQNLFIEMREKGIYPNVVTYNCMIDAFCNNGRWIDAERLLRDMIKR- 327 Query: 490 AFKPNIITFNVLLADCSKTGELDMVERILELMTDHDLMPDRVTYDLMVRAFCSAGEHERA 669 P+++TFN L++ K + E + E M ++P+ +TY+ M+ FC + A Sbjct: 328 EISPDVVTFNSLISAFVKEVKFSEAEDLYEEMLHRGIVPNAITYNSMIDGFCKKNRLDEA 387 Query: 670 CEIFTEMTSQEIGPDLVSFNIL 735 ++F M S+ PD+V+FN L Sbjct: 388 KQMFDSMASKGCSPDVVTFNTL 409 Score = 65.9 bits (159), Expect = 1e-08 Identities = 34/136 (25%), Positives = 70/136 (51%) Frame = +1 Query: 328 KSKTLSEAKDLYETIITTRRRPNFNTHHVLLRKFAKNTMKEDALKLFLFMKERGAFKPNI 507 K L EAK +++ +++ + T++ L+ + +D + L M R N Sbjct: 566 KQNRLDEAKQMFDLMVSNGCSSDVVTYNTLIDGCCRTKRVDDGMDLLHEMSRR-QIVANT 624 Query: 508 ITFNVLLADCSKTGELDMVERILELMTDHDLMPDRVTYDLMVRAFCSAGEHERACEIFTE 687 +T+N L+ + G+L+ + + M H + PD +TY++++ C G+ ++A E+F Sbjct: 625 VTYNTLIHGLCQVGDLNAAQDLFLNMNSHGVCPDILTYNILLDGLCDNGKLKKALEMFEV 684 Query: 688 MTSQEIGPDLVSFNIL 735 M +I D+VS++I+ Sbjct: 685 MLKNKIDVDIVSYSII 700 Score = 63.5 bits (153), Expect = 7e-08 Identities = 37/142 (26%), Positives = 68/142 (47%), Gaps = 10/142 (7%) Frame = +1 Query: 340 LSEAKDLYETIITTRRRPNFNTHHVLLRKFAKNTMKEDALKLFLFMKERG---------- 489 L+ D+++ + +T RPN T + LL N E AL +F M++ Sbjct: 454 LNGVLDIFQEMTSTDVRPNIVTLNTLLDGLCNNGKLEKALTIFEVMQKSKMDLDTSHAFT 513 Query: 490 AFKPNIITFNVLLADCSKTGELDMVERILELMTDHDLMPDRVTYDLMVRAFCSAGEHERA 669 +P++ T+++L++ K + E + E M ++PD +TY+ M+ FC + A Sbjct: 514 GVEPDVQTYSILISAFVKERKFSEAEELYEKMLHRGIVPDTITYNSMINGFCKQNRLDEA 573 Query: 670 CEIFTEMTSQEIGPDLVSFNIL 735 ++F M S D+V++N L Sbjct: 574 KQMFDLMVSNGCSSDVVTYNTL 595 >ref|XP_006300886.1| hypothetical protein CARUB_v10019976mg [Capsella rubella] gi|482569596|gb|EOA33784.1| hypothetical protein CARUB_v10019976mg [Capsella rubella] Length = 622 Score = 82.8 bits (203), Expect = 1e-13 Identities = 42/137 (30%), Positives = 77/137 (56%) Frame = +1 Query: 325 LKSKTLSEAKDLYETIITTRRRPNFNTHHVLLRKFAKNTMKEDALKLFLFMKERGAFKPN 504 +K +EA++LY +++ PN T++ ++ F K+ +DA ++F M +G PN Sbjct: 339 VKEGKFTEAEELYADMLSRGIVPNTVTYNSMVDGFCKHNRLDDANRMFDLMASKGC-SPN 397 Query: 505 IITFNVLLADCSKTGELDMVERILELMTDHDLMPDRVTYDLMVRAFCSAGEHERACEIFT 684 ++TFN L+ C +D ++L M+ L+ D ++Y+ ++ C G+ A ++F Sbjct: 398 VVTFNTLIHGCCMAKMVDDGMKLLREMSRRGLVADTISYNTLIHGLCQVGKLNAAQDLFR 457 Query: 685 EMTSQEIGPDLVSFNIL 735 EMTSQ + PD ++ NIL Sbjct: 458 EMTSQGVYPDTITCNIL 474 Score = 61.6 bits (148), Expect = 3e-07 Identities = 37/132 (28%), Positives = 63/132 (47%) Frame = +1 Query: 340 LSEAKDLYETIITTRRRPNFNTHHVLLRKFAKNTMKEDALKLFLFMKERGAFKPNIITFN 519 +SEA L + + T PN T L+ + +AL L M + G PN++T+ Sbjct: 169 ISEAVALSDRMAETGCTPNVVTFTTLMNGLCREGRVLEALALLDRMVKNG-HGPNVVTYR 227 Query: 520 VLLADCSKTGELDMVERILELMTDHDLMPDRVTYDLMVRAFCSAGEHERACEIFTEMTSQ 699 ++ K G+ D +L M + + D V Y+ ++ C G+H A +FTEM + Sbjct: 228 TIVNGMCKMGDTDSALNLLRKMDESHIKADLVIYNPIIDRLCKEGKHSDAQNLFTEMREK 287 Query: 700 EIGPDLVSFNIL 735 I P +V++N + Sbjct: 288 GIFPSVVTYNCM 299 Score = 59.7 bits (143), Expect = 1e-06 Identities = 40/142 (28%), Positives = 68/142 (47%) Frame = +1 Query: 310 LTQQLLKSKTLSEAKDLYETIITTRRRPNFNTHHVLLRKFAKNTMKEDALKLFLFMKERG 489 + +L K S+A++L+ + P+ T++ ++ + DA +L M ER Sbjct: 264 IIDRLCKEGKHSDAQNLFTEMREKGIFPSVVTYNCMIDASCSSGRWSDAERLLRDMIER- 322 Query: 490 AFKPNIITFNVLLADCSKTGELDMVERILELMTDHDLMPDRVTYDLMVRAFCSAGEHERA 669 P+I TFN L+ K G+ E + M ++P+ VTY+ MV FC + A Sbjct: 323 QISPDIFTFNALINASVKEGKFTEAEELYADMLSRGIVPNTVTYNSMVDGFCKHNRLDDA 382 Query: 670 CEIFTEMTSQEIGPDLVSFNIL 735 +F M S+ P++V+FN L Sbjct: 383 NRMFDLMASKGCSPNVVTFNTL 404 Score = 58.9 bits (141), Expect = 2e-06 Identities = 36/142 (25%), Positives = 65/142 (45%) Frame = +1 Query: 310 LTQQLLKSKTLSEAKDLYETIITTRRRPNFNTHHVLLRKFAKNTMKEDALKLFLFMKERG 489 L L + + EA L + ++ PN T+ ++ K + AL L M E Sbjct: 194 LMNGLCREGRVLEALALLDRMVKNGHGPNVVTYRTIVNGMCKMGDTDSALNLLRKMDE-S 252 Query: 490 AFKPNIITFNVLLADCSKTGELDMVERILELMTDHDLMPDRVTYDLMVRAFCSAGEHERA 669 K +++ +N ++ K G+ + + M + + P VTY+ M+ A CS+G A Sbjct: 253 HIKADLVIYNPIIDRLCKEGKHSDAQNLFTEMREKGIFPSVVTYNCMIDASCSSGRWSDA 312 Query: 670 CEIFTEMTSQEIGPDLVSFNIL 735 + +M ++I PD+ +FN L Sbjct: 313 ERLLRDMIERQISPDIFTFNAL 334 >gb|AAF75803.1|AC011000_6 Contains weak similarity to leaf protein from Ipomea nil gb|D85101 and contains a RepB PF|01051 protein and multiple PPR PF|01535 repeats [Arabidopsis thaliana] Length = 613 Score = 82.8 bits (203), Expect = 1e-13 Identities = 40/132 (30%), Positives = 75/132 (56%) Frame = +1 Query: 340 LSEAKDLYETIITTRRRPNFNTHHVLLRKFAKNTMKEDALKLFLFMKERGAFKPNIITFN 519 L EAK ++E +I+ PN T++ L++ F K E+ ++LF M +RG N +T+N Sbjct: 360 LDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVG-NTVTYN 418 Query: 520 VLLADCSKTGELDMVERILELMTDHDLMPDRVTYDLMVRAFCSAGEHERACEIFTEMTSQ 699 L+ + G+ DM ++I + M + PD +TY +++ C G+ E+A +F + Sbjct: 419 TLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKS 478 Query: 700 EIGPDLVSFNIL 735 ++ PD+ ++NI+ Sbjct: 479 KMEPDIYTYNIM 490 Score = 65.9 bits (159), Expect = 1e-08 Identities = 40/131 (30%), Positives = 66/131 (50%) Frame = +1 Query: 343 SEAKDLYETIITTRRRPNFNTHHVLLRKFAKNTMKEDALKLFLFMKERGAFKPNIITFNV 522 S+A L +I + PN T L+ F K +A KL+ M +R + P+I T++ Sbjct: 291 SDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR-SIDPDIFTYSS 349 Query: 523 LLADCSKTGELDMVERILELMTDHDLMPDRVTYDLMVRAFCSAGEHERACEIFTEMTSQE 702 L+ LD + + ELM D P+ VTY+ +++ FC A E E+F EM+ + Sbjct: 350 LINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRG 409 Query: 703 IGPDLVSFNIL 735 + + V++N L Sbjct: 410 LVGNTVTYNTL 420 Score = 59.3 bits (142), Expect = 1e-06 Identities = 36/134 (26%), Positives = 67/134 (50%) Frame = +1 Query: 334 KTLSEAKDLYETIITTRRRPNFNTHHVLLRKFAKNTMKEDALKLFLFMKERGAFKPNIIT 513 K +SEA L + + +PN T + L+ + +A+ L M RG +P++ T Sbjct: 148 KRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGC-QPDLFT 206 Query: 514 FNVLLADCSKTGELDMVERILELMTDHDLMPDRVTYDLMVRAFCSAGEHERACEIFTEMT 693 + ++ K G++D+ +L+ M + D V Y ++ A C+ A +FTEM Sbjct: 207 YGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMD 266 Query: 694 SQEIGPDLVSFNIL 735 ++ I P++V++N L Sbjct: 267 NKGIRPNVVTYNSL 280 >ref|NP_176481.2| pentatricopeptide repeat protein RPF3 [Arabidopsis thaliana] gi|193806495|sp|Q9LQ14.2|PPR96_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62930, chloroplastic; Flags: Precursor gi|332195902|gb|AEE34023.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana] Length = 629 Score = 82.8 bits (203), Expect = 1e-13 Identities = 40/132 (30%), Positives = 75/132 (56%) Frame = +1 Query: 340 LSEAKDLYETIITTRRRPNFNTHHVLLRKFAKNTMKEDALKLFLFMKERGAFKPNIITFN 519 L EAK ++E +I+ PN T++ L++ F K E+ ++LF M +RG N +T+N Sbjct: 376 LDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVG-NTVTYN 434 Query: 520 VLLADCSKTGELDMVERILELMTDHDLMPDRVTYDLMVRAFCSAGEHERACEIFTEMTSQ 699 L+ + G+ DM ++I + M + PD +TY +++ C G+ E+A +F + Sbjct: 435 TLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKS 494 Query: 700 EIGPDLVSFNIL 735 ++ PD+ ++NI+ Sbjct: 495 KMEPDIYTYNIM 506 Score = 65.9 bits (159), Expect = 1e-08 Identities = 40/131 (30%), Positives = 66/131 (50%) Frame = +1 Query: 343 SEAKDLYETIITTRRRPNFNTHHVLLRKFAKNTMKEDALKLFLFMKERGAFKPNIITFNV 522 S+A L +I + PN T L+ F K +A KL+ M +R + P+I T++ Sbjct: 307 SDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR-SIDPDIFTYSS 365 Query: 523 LLADCSKTGELDMVERILELMTDHDLMPDRVTYDLMVRAFCSAGEHERACEIFTEMTSQE 702 L+ LD + + ELM D P+ VTY+ +++ FC A E E+F EM+ + Sbjct: 366 LINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRG 425 Query: 703 IGPDLVSFNIL 735 + + V++N L Sbjct: 426 LVGNTVTYNTL 436 Score = 59.3 bits (142), Expect = 1e-06 Identities = 36/134 (26%), Positives = 67/134 (50%) Frame = +1 Query: 334 KTLSEAKDLYETIITTRRRPNFNTHHVLLRKFAKNTMKEDALKLFLFMKERGAFKPNIIT 513 K +SEA L + + +PN T + L+ + +A+ L M RG +P++ T Sbjct: 164 KRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGC-QPDLFT 222 Query: 514 FNVLLADCSKTGELDMVERILELMTDHDLMPDRVTYDLMVRAFCSAGEHERACEIFTEMT 693 + ++ K G++D+ +L+ M + D V Y ++ A C+ A +FTEM Sbjct: 223 YGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMD 282 Query: 694 SQEIGPDLVSFNIL 735 ++ I P++V++N L Sbjct: 283 NKGIRPNVVTYNSL 296 >emb|CCD31439.1| RNA processing factor 3 [Arabidopsis thaliana] Length = 629 Score = 82.8 bits (203), Expect = 1e-13 Identities = 40/132 (30%), Positives = 75/132 (56%) Frame = +1 Query: 340 LSEAKDLYETIITTRRRPNFNTHHVLLRKFAKNTMKEDALKLFLFMKERGAFKPNIITFN 519 L EAK ++E +I+ PN T++ L++ F K E+ ++LF M +RG N +T+N Sbjct: 376 LDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVG-NTVTYN 434 Query: 520 VLLADCSKTGELDMVERILELMTDHDLMPDRVTYDLMVRAFCSAGEHERACEIFTEMTSQ 699 L+ + G+ DM ++I + M + PD +TY +++ C G+ E+A +F + Sbjct: 435 TLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKS 494 Query: 700 EIGPDLVSFNIL 735 ++ PD+ ++NI+ Sbjct: 495 KMEPDIYTYNIM 506 Score = 66.2 bits (160), Expect = 1e-08 Identities = 40/131 (30%), Positives = 66/131 (50%) Frame = +1 Query: 343 SEAKDLYETIITTRRRPNFNTHHVLLRKFAKNTMKEDALKLFLFMKERGAFKPNIITFNV 522 S+A L +I + PN T L+ F K +A KL+ M +R + P+I T++ Sbjct: 307 SDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR-SIDPDIFTYSS 365 Query: 523 LLADCSKTGELDMVERILELMTDHDLMPDRVTYDLMVRAFCSAGEHERACEIFTEMTSQE 702 L+ LD + + ELM D P+ VTY+ +++ FC A E E+F EM+ + Sbjct: 366 LINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRG 425 Query: 703 IGPDLVSFNIL 735 + + V++N L Sbjct: 426 LVGNTVTYNTL 436 >ref|XP_002978430.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii] gi|300153779|gb|EFJ20416.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii] Length = 475 Score = 82.8 bits (203), Expect = 1e-13 Identities = 44/138 (31%), Positives = 76/138 (55%) Frame = +1 Query: 322 LLKSKTLSEAKDLYETIITTRRRPNFNTHHVLLRKFAKNTMKEDALKLFLFMKERGAFKP 501 L++ +++A+ +YE +I+ P+ T+ L+ F+ + A +LF M RG +P Sbjct: 202 LMRKGRIADAQGVYEEMISAGCSPDVITYSTLIHGFSLARKHDQAHELFEAMISRGC-RP 260 Query: 502 NIITFNVLLADCSKTGELDMVERILELMTDHDLMPDRVTYDLMVRAFCSAGEHERACEIF 681 N +T+N LL K + D + M + PD+VTY ++ FC+ G+ E+A E+F Sbjct: 261 NAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDKVTYTTLLYGFCNVGKIEQAVEVF 320 Query: 682 TEMTSQEIGPDLVSFNIL 735 EM S+ PD+V++N L Sbjct: 321 DEMVSKGHDPDVVAYNCL 338 Score = 73.6 bits (179), Expect = 7e-11 Identities = 42/130 (32%), Positives = 70/130 (53%) Frame = +1 Query: 346 EAKDLYETIITTRRRPNFNTHHVLLRKFAKNTMKEDALKLFLFMKERGAFKPNIITFNVL 525 +A +L+E +I+ RPN T++ LL K + ++A +LF M ERG P+ +T+ L Sbjct: 245 QAHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGC-DPDKVTYTTL 303 Query: 526 LADCSKTGELDMVERILELMTDHDLMPDRVTYDLMVRAFCSAGEHERACEIFTEMTSQEI 705 L G+++ + + M PD V Y+ +++ F AG+ A ++F M S+E Sbjct: 304 LYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQLFQVMVSREC 363 Query: 706 GPDLVSFNIL 735 PD VS NI+ Sbjct: 364 KPDTVSHNIM 373 Score = 62.8 bits (151), Expect = 1e-07 Identities = 35/133 (26%), Positives = 68/133 (51%), Gaps = 1/133 (0%) Frame = +1 Query: 340 LSEAKDLYETIITTRRRPNFNTHHVLLRKFAKNTMKEDALKLFLFMKERGAFKPNIITFN 519 + +A ++++ +++ P+ ++ LL+ F + +A +LF M R KP+ ++ N Sbjct: 313 IEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQLFQVMVSREC-KPDTVSHN 371 Query: 520 VLLADCSKTGELDMVERILELMT-DHDLMPDRVTYDLMVRAFCSAGEHERACEIFTEMTS 696 +++ SK LD + E M DH PD VTY+ ++ C A ++F E+ Sbjct: 372 IMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEAMKVFKEIDR 431 Query: 697 QEIGPDLVSFNIL 735 ++ PD +FN+L Sbjct: 432 LKLSPDPHAFNVL 444 Score = 61.6 bits (148), Expect = 3e-07 Identities = 39/143 (27%), Positives = 71/143 (49%), Gaps = 1/143 (0%) Frame = +1 Query: 310 LTQQLLKSKTLSEAKDLYETIITTRRR-PNFNTHHVLLRKFAKNTMKEDALKLFLFMKER 486 L L K+K + +A ++ T+++ R P+ ++ +L+ F K A KL+ M + Sbjct: 127 LLNSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDL 186 Query: 487 GAFKPNIITFNVLLADCSKTGELDMVERILELMTDHDLMPDRVTYDLMVRAFCSAGEHER 666 PN+ T+N L + G + + + E M PD +TY ++ F A +H++ Sbjct: 187 NCV-PNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLIHGFSLARKHDQ 245 Query: 667 ACEIFTEMTSQEIGPDLVSFNIL 735 A E+F M S+ P+ V++N L Sbjct: 246 AHELFEAMISRGCRPNAVTYNCL 268 >ref|XP_002970795.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii] gi|302806735|ref|XP_002985099.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii] gi|300147309|gb|EFJ13974.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii] gi|300161506|gb|EFJ28121.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii] Length = 543 Score = 82.4 bits (202), Expect = 1e-13 Identities = 45/142 (31%), Positives = 77/142 (54%) Frame = +1 Query: 310 LTQQLLKSKTLSEAKDLYETIITTRRRPNFNTHHVLLRKFAKNTMKEDALKLFLFMKERG 489 L L KS + EA+ L ET++ + RPN T++ L+ + K A +L M + G Sbjct: 214 LIDGLCKSYRMEEARQLLETMVKRKVRPNLVTYNTLIYGYCKTGCTGLAHQLIERMIQSG 273 Query: 490 AFKPNIITFNVLLADCSKTGELDMVERILELMTDHDLMPDRVTYDLMVRAFCSAGEHERA 669 P+++TFN L++ + ++D +L LM P+ VTY++++ C AG A Sbjct: 274 TH-PDVVTFNSLISGFCQKSKIDKACEVLHLMKKGLCAPNLVTYNVLISGLCDAGRANEA 332 Query: 670 CEIFTEMTSQEIGPDLVSFNIL 735 CE+ +EM + I PD++++N L Sbjct: 333 CELLSEMDGRGILPDIITYNSL 354 Score = 59.7 bits (143), Expect = 1e-06 Identities = 34/126 (26%), Positives = 65/126 (51%) Frame = +1 Query: 349 AKDLYETIITTRRRPNFNTHHVLLRKFAKNTMKEDALKLFLFMKERGAFKPNIITFNVLL 528 A L E +I + P+ T + L+ F + + + A ++ MK +G PN++T+NVL+ Sbjct: 262 AHQLIERMIQSGTHPDVVTFNSLISGFCQKSKIDKACEVLHLMK-KGLCAPNLVTYNVLI 320 Query: 529 ADCSKTGELDMVERILELMTDHDLMPDRVTYDLMVRAFCSAGEHERACEIFTEMTSQEIG 708 + G + +L M ++PD +TY+ ++ FC + E+A +I M + + Sbjct: 321 SGLCDAGRANEACELLSEMDGRGILPDIITYNSLIGIFCRNFQIEQAFQIQNLMVERGVI 380 Query: 709 PDLVSF 726 PD +S+ Sbjct: 381 PDGISY 386 Score = 57.4 bits (137), Expect = 5e-06 Identities = 35/142 (24%), Positives = 66/142 (46%) Frame = +1 Query: 310 LTQQLLKSKTLSEAKDLYETIITTRRRPNFNTHHVLLRKFAKNTMKEDALKLFLFMKERG 489 + Q L + LS A + + P+ ++L+ K +A ++ M ERG Sbjct: 146 IVQALCNTGNLSRAMQYFRESVECA--PDSVLFNILVHGLCKANQLSEARQMIEEMSERG 203 Query: 490 AFKPNIITFNVLLADCSKTGELDMVERILELMTDHDLMPDRVTYDLMVRAFCSAGEHERA 669 P+++T+N L+ K+ ++ ++LE M + P+ VTY+ ++ +C G A Sbjct: 204 IV-PDVVTYNSLIDGLCKSYRMEEARQLLETMVKRKVRPNLVTYNTLIYGYCKTGCTGLA 262 Query: 670 CEIFTEMTSQEIGPDLVSFNIL 735 ++ M PD+V+FN L Sbjct: 263 HQLIERMIQSGTHPDVVTFNSL 284 >gb|AAM62704.1| unknown [Arabidopsis thaliana] Length = 463 Score = 82.4 bits (202), Expect = 1e-13 Identities = 47/140 (33%), Positives = 78/140 (55%), Gaps = 4/140 (2%) Frame = +1 Query: 328 KSKTLSEAKDLYETIITTRRRP-NFNTHHVLLRKFAKNTMKEDALKLFL-FMKERGAFKP 501 KS LS+AK L+ +I T R P + H+ +L+ +A + +D +K F MK + F+P Sbjct: 61 KSPNLSDAKSLFNSIAATSRIPLDLKFHNSVLQSYASIAVVDDTVKFFQHIMKSQPNFRP 120 Query: 502 NIITFNVLLADCSKTGE--LDMVERILELMTDHDLMPDRVTYDLMVRAFCSAGEHERACE 675 TF +LL+ + + + V R+L LM ++ L PD+VT D+ VR+ C G + A + Sbjct: 121 GRSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKD 180 Query: 676 IFTEMTSQEIGPDLVSFNIL 735 + E+T + PD ++N L Sbjct: 181 LMKELTEKHSPPDTYTYNFL 200 Score = 63.2 bits (152), Expect = 9e-08 Identities = 38/142 (26%), Positives = 67/142 (47%) Frame = +1 Query: 310 LTQQLLKSKTLSEAKDLYETIITTRRRPNFNTHHVLLRKFAKNTMKEDALKLFLFMKERG 489 L + SK L EA L + +P+ ++ +++ F + +A+ ++ MKE G Sbjct: 236 LIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEG 295 Query: 490 AFKPNIITFNVLLADCSKTGELDMVERILELMTDHDLMPDRVTYDLMVRAFCSAGEHERA 669 +P+ IT+N L+ SK G ++ L+ M D PD TY ++ C GE A Sbjct: 296 V-EPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGA 354 Query: 670 CEIFTEMTSQEIGPDLVSFNIL 735 + EM ++ P+ ++N L Sbjct: 355 LSLLEEMEARGCAPNDCTYNTL 376 >ref|XP_004304863.1| PREDICTED: pentatricopeptide repeat-containing protein At1g09820-like [Fragaria vesca subsp. vesca] Length = 592 Score = 82.0 bits (201), Expect = 2e-13 Identities = 39/136 (28%), Positives = 77/136 (56%) Frame = +1 Query: 328 KSKTLSEAKDLYETIITTRRRPNFNTHHVLLRKFAKNTMKEDALKLFLFMKERGAFKPNI 507 K K + A++L++ I P+ T++ L+ ++K+ M E+A + + M ERG P Sbjct: 365 KKKMMKRARELFDDIGRQGLEPSVITYNTLIDAYSKDGMIEEAFEFYNSMLERGV-SPTT 423 Query: 508 ITFNVLLADCSKTGELDMVERILELMTDHDLMPDRVTYDLMVRAFCSAGEHERACEIFTE 687 TFN ++ + G+++M ++L M + L DR+TY++ + +C G+ +A E+F E Sbjct: 424 STFNCRISGLCRQGKMEMALKLLHEMEGNGLRADRITYNIFIDGYCKEGDSRKAQELFNE 483 Query: 688 MTSQEIGPDLVSFNIL 735 M + + P+ +++N L Sbjct: 484 MIKKRLSPNHLTYNFL 499 Score = 58.5 bits (140), Expect = 2e-06 Identities = 33/139 (23%), Positives = 70/139 (50%), Gaps = 3/139 (2%) Frame = +1 Query: 310 LTQQLLKSKTLSEAKDLYETIITTRRRPNFNTHHVLLRKFAKNTMKEDALKLFLFMKERG 489 L + L+K + + +Y +I R +PN T ++++R K E+A + + + Sbjct: 180 LLRALVKEGEVGSVEYVYREMIRRRIKPNLYTFNMVIRGLCKVGKLEEAKDVVVNDMKAW 239 Query: 490 AFKPNIITFNVLLADCSKTGELDMV---ERILELMTDHDLMPDRVTYDLMVRAFCSAGEH 660 PN++++N L+ K G L + + IL+ M ++ + P++ TY++++ F Sbjct: 240 GILPNVVSYNTLIDGYCKFGGLGRMYKADAILKEMKENSIQPNKCTYNILISGFGKDENI 299 Query: 661 ERACEIFTEMTSQEIGPDL 717 A ++F + QE+ PD+ Sbjct: 300 PAAIKVFEAIVKQELKPDV 318 >ref|XP_004289096.1| PREDICTED: pentatricopeptide repeat-containing protein At1g09820-like [Fragaria vesca subsp. vesca] Length = 608 Score = 82.0 bits (201), Expect = 2e-13 Identities = 46/136 (33%), Positives = 73/136 (53%) Frame = +1 Query: 328 KSKTLSEAKDLYETIITTRRRPNFNTHHVLLRKFAKNTMKEDALKLFLFMKERGAFKPNI 507 K K L EA++L++TI N T + L+ + KN M+E+A L M ER F PN Sbjct: 381 KKKMLKEARELFDTICERGLVANVITFNTLIDGYCKNEMEEEAYALHNMMIERRVF-PNT 439 Query: 508 ITFNVLLADCSKTGELDMVERILELMTDHDLMPDRVTYDLMVRAFCSAGEHERACEIFTE 687 TFN L+A G ++ ++ L+ M + D +TYD+++ A C GE +A + E Sbjct: 440 STFNCLIAGSLTKGNIETAKKFLQQMEAKGVKADCITYDILIDALCKDGEPRKAERLLNE 499 Query: 688 MTSQEIGPDLVSFNIL 735 M ++ + P V++N L Sbjct: 500 MFTKGLSPRHVTYNTL 515 Score = 57.8 bits (138), Expect = 4e-06 Identities = 38/140 (27%), Positives = 66/140 (47%), Gaps = 2/140 (1%) Frame = +1 Query: 322 LLKSKTLSEAKDLYETIITTRRRPNFNTHHVLLRKFAKNTMKEDALKLFLFMKERGAFK- 498 L K L++AKD+ + + PN T++ ++ + K K +KE A K Sbjct: 236 LCKVGKLNKAKDVMDDMKAWGVAPNVVTYNTIIGGYCKLGGLGKMHKADAMLKEMVASKI 295 Query: 499 -PNIITFNVLLADCSKTGELDMVERILELMTDHDLMPDRVTYDLMVRAFCSAGEHERACE 675 P+ TFN+L+ K ++ ++ E M L P+ VTY+ ++ C G E AC Sbjct: 296 CPSETTFNILIDGSCKDDDVAAAFKVFEEMRREGLKPNVVTYNSLINGLCCDGRLEEACG 355 Query: 676 IFTEMTSQEIGPDLVSFNIL 735 + EM + P++ ++N L Sbjct: 356 LRDEMLGLGLKPEIATYNAL 375