BLASTX nr result
ID: Ephedra28_contig00029230
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra28_contig00029230
(443 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006479877.1| PREDICTED: protein TRANSPORT INHIBITOR RESPO... 59 5e-07
ref|XP_002520681.1| TRANSPORT INHIBITOR RESPONSE 1 protein, puta... 59 5e-07
ref|XP_002269127.1| PREDICTED: protein TRANSPORT INHIBITOR RESPO... 59 9e-07
emb|CAN82353.1| hypothetical protein VITISV_036655 [Vitis vinifera] 59 9e-07
ref|XP_004309692.1| PREDICTED: protein TRANSPORT INHIBITOR RESPO... 58 1e-06
gb|AFS44506.1| auxin receptor 1, partial [Fragaria x ananassa] 58 1e-06
emb|CBI29780.3| unnamed protein product [Vitis vinifera] 58 1e-06
ref|XP_002272850.1| PREDICTED: protein TRANSPORT INHIBITOR RESPO... 58 1e-06
emb|CAN73714.1| hypothetical protein VITISV_038840 [Vitis vinifera] 58 1e-06
ref|XP_006417190.1| hypothetical protein EUTSA_v10007195mg [Eutr... 57 2e-06
ref|XP_006290792.1| hypothetical protein CARUB_v10016894mg [Caps... 57 2e-06
ref|XP_006444233.1| hypothetical protein CICLE_v10019437mg [Citr... 57 3e-06
ref|XP_002321035.1| TRANSPORT INHIBITOR RESPONSE 1 family protei... 57 3e-06
gb|ACT53268.1| transport inhibitor response 1 [Nicotiana tabacum] 57 3e-06
gb|EXC34697.1| Protein TRANSPORT INHIBITOR RESPONSE 1 [Morus not... 56 4e-06
gb|EXB62856.1| Protein AUXIN SIGNALING F-BOX 2 [Morus notabilis] 56 4e-06
ref|NP_567135.1| protein TRANSPORT INHIBITOR RESPONSE 1 [Arabido... 56 4e-06
ref|XP_006359432.1| PREDICTED: protein TRANSPORT INHIBITOR RESPO... 56 4e-06
ref|XP_006306355.1| hypothetical protein CARUB_v10012250mg [Caps... 56 4e-06
gb|EMJ02922.1| hypothetical protein PRUPE_ppa003344mg [Prunus pe... 56 4e-06
>ref|XP_006479877.1| PREDICTED: protein TRANSPORT INHIBITOR RESPONSE 1-like [Citrus
sinensis]
Length = 585
Score = 59.3 bits (142), Expect = 5e-07
Identities = 27/47 (57%), Positives = 36/47 (76%)
Frame = -2
Query: 250 KLHLKWMILSHNALHLLFSVFSNFKILVLKSCEGFSIHGLASIAANC 110
+L LK M+++ +L L+ F NFK+LVL SCEGFS HGLA+IAA+C
Sbjct: 110 ELKLKRMVVTDESLELIAKSFKNFKVLVLSSCEGFSTHGLAAIAADC 156
>ref|XP_002520681.1| TRANSPORT INHIBITOR RESPONSE 1 protein, putative [Ricinus communis]
gi|223540066|gb|EEF41643.1| TRANSPORT INHIBITOR RESPONSE
1 protein, putative [Ricinus communis]
Length = 585
Score = 59.3 bits (142), Expect = 5e-07
Identities = 28/47 (59%), Positives = 35/47 (74%)
Frame = -2
Query: 250 KLHLKWMILSHNALHLLFSVFSNFKILVLKSCEGFSIHGLASIAANC 110
++ LK M++S AL L+ F NFK+LVL SCEGFS GLA+IAANC
Sbjct: 109 EIRLKRMVVSDEALELISKSFKNFKVLVLSSCEGFSTGGLAAIAANC 155
>ref|XP_002269127.1| PREDICTED: protein TRANSPORT INHIBITOR RESPONSE 1 [Vitis vinifera]
Length = 576
Score = 58.5 bits (140), Expect = 9e-07
Identities = 29/57 (50%), Positives = 39/57 (68%)
Frame = -2
Query: 280 ASSLATTTSYKLHLKWMILSHNALHLLFSVFSNFKILVLKSCEGFSIHGLASIAANC 110
A ++A +L LK M+++ +L L+ F NFK+LVL SCEGFS GLA+IAANC
Sbjct: 95 AMAMAYPMLEELRLKRMVVTDESLELISRSFKNFKVLVLSSCEGFSTDGLAAIAANC 151
>emb|CAN82353.1| hypothetical protein VITISV_036655 [Vitis vinifera]
Length = 590
Score = 58.5 bits (140), Expect = 9e-07
Identities = 29/57 (50%), Positives = 39/57 (68%)
Frame = -2
Query: 280 ASSLATTTSYKLHLKWMILSHNALHLLFSVFSNFKILVLKSCEGFSIHGLASIAANC 110
A ++A +L LK M+++ +L L+ F NFK+LVL SCEGFS GLA+IAANC
Sbjct: 95 AMAMAYPMLEELRLKRMVVTDESLELISRSFKNFKVLVLSSCEGFSTDGLAAIAANC 151
>ref|XP_004309692.1| PREDICTED: protein TRANSPORT INHIBITOR RESPONSE 1-like [Fragaria
vesca subsp. vesca]
Length = 584
Score = 58.2 bits (139), Expect = 1e-06
Identities = 27/47 (57%), Positives = 35/47 (74%)
Frame = -2
Query: 250 KLHLKWMILSHNALHLLFSVFSNFKILVLKSCEGFSIHGLASIAANC 110
++ LK M+++ +L L+ F NFK+LVL SCEGFS GLASIAANC
Sbjct: 108 EIRLKRMVVTDESLELIAKSFKNFKLLVLSSCEGFSTDGLASIAANC 154
>gb|AFS44506.1| auxin receptor 1, partial [Fragaria x ananassa]
Length = 579
Score = 58.2 bits (139), Expect = 1e-06
Identities = 27/47 (57%), Positives = 35/47 (74%)
Frame = -2
Query: 250 KLHLKWMILSHNALHLLFSVFSNFKILVLKSCEGFSIHGLASIAANC 110
++ LK M+++ +L L+ F NFK+LVL SCEGFS GLASIAANC
Sbjct: 105 EIRLKRMVVTDESLELIAKSFKNFKLLVLSSCEGFSTDGLASIAANC 151
>emb|CBI29780.3| unnamed protein product [Vitis vinifera]
Length = 147
Score = 58.2 bits (139), Expect = 1e-06
Identities = 27/47 (57%), Positives = 35/47 (74%)
Frame = -2
Query: 250 KLHLKWMILSHNALHLLFSVFSNFKILVLKSCEGFSIHGLASIAANC 110
+L LK M+++ +L L+ F NFK+LVL SCEGFS GLA+IAANC
Sbjct: 10 ELRLKRMVMTDESLELISRSFKNFKVLVLSSCEGFSTDGLAAIAANC 56
>ref|XP_002272850.1| PREDICTED: protein TRANSPORT INHIBITOR RESPONSE 1 [Vitis vinifera]
Length = 581
Score = 57.8 bits (138), Expect = 1e-06
Identities = 27/47 (57%), Positives = 35/47 (74%)
Frame = -2
Query: 250 KLHLKWMILSHNALHLLFSVFSNFKILVLKSCEGFSIHGLASIAANC 110
+L LK M++S AL L+ F NF++LV+ SCEGFS GLA+IAANC
Sbjct: 105 ELRLKRMVVSDEALELIAKKFKNFRVLVMYSCEGFSTDGLATIAANC 151
>emb|CAN73714.1| hypothetical protein VITISV_038840 [Vitis vinifera]
Length = 581
Score = 57.8 bits (138), Expect = 1e-06
Identities = 27/47 (57%), Positives = 35/47 (74%)
Frame = -2
Query: 250 KLHLKWMILSHNALHLLFSVFSNFKILVLKSCEGFSIHGLASIAANC 110
+L LK M++S AL L+ F NF++LV+ SCEGFS GLA+IAANC
Sbjct: 105 ELRLKRMVVSDEALELIAKKFKNFRVLVMYSCEGFSTDGLATIAANC 151
>ref|XP_006417190.1| hypothetical protein EUTSA_v10007195mg [Eutrema salsugineum]
gi|557094961|gb|ESQ35543.1| hypothetical protein
EUTSA_v10007195mg [Eutrema salsugineum]
Length = 577
Score = 57.4 bits (137), Expect = 2e-06
Identities = 29/47 (61%), Positives = 35/47 (74%)
Frame = -2
Query: 250 KLHLKWMILSHNALHLLFSVFSNFKILVLKSCEGFSIHGLASIAANC 110
+L LK M++S +L LL F+NFK LVL SCEGF+ GLASIAANC
Sbjct: 104 ELRLKRMVVSDESLELLSRSFANFKSLVLVSCEGFTTDGLASIAANC 150
>ref|XP_006290792.1| hypothetical protein CARUB_v10016894mg [Capsella rubella]
gi|482559499|gb|EOA23690.1| hypothetical protein
CARUB_v10016894mg [Capsella rubella]
Length = 594
Score = 57.4 bits (137), Expect = 2e-06
Identities = 29/57 (50%), Positives = 38/57 (66%)
Frame = -2
Query: 280 ASSLATTTSYKLHLKWMILSHNALHLLFSVFSNFKILVLKSCEGFSIHGLASIAANC 110
A S + T ++ LK M++S + L L+ F NFK+LVL SCEGFS GLA+IAA C
Sbjct: 99 AMSSSYTWLEEIRLKRMVVSDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATC 155
>ref|XP_006444233.1| hypothetical protein CICLE_v10019437mg [Citrus clementina]
gi|557546495|gb|ESR57473.1| hypothetical protein
CICLE_v10019437mg [Citrus clementina]
Length = 585
Score = 57.0 bits (136), Expect = 3e-06
Identities = 26/47 (55%), Positives = 35/47 (74%)
Frame = -2
Query: 250 KLHLKWMILSHNALHLLFSVFSNFKILVLKSCEGFSIHGLASIAANC 110
+L LK M+++ +L L+ NFK+LVL SCEGFS HGLA+IAA+C
Sbjct: 110 ELKLKRMVVTDESLELIAKSLKNFKVLVLSSCEGFSTHGLAAIAADC 156
>ref|XP_002321035.1| TRANSPORT INHIBITOR RESPONSE 1 family protein [Populus trichocarpa]
gi|222861808|gb|EEE99350.1| TRANSPORT INHIBITOR RESPONSE
1 family protein [Populus trichocarpa]
Length = 584
Score = 57.0 bits (136), Expect = 3e-06
Identities = 28/57 (49%), Positives = 39/57 (68%), Gaps = 4/57 (7%)
Frame = -2
Query: 268 ATTTSY----KLHLKWMILSHNALHLLFSVFSNFKILVLKSCEGFSIHGLASIAANC 110
A T+Y ++ LK M++S +L ++ F NFK+LVL SCEGFS GLA++AANC
Sbjct: 98 ALATAYPWLEEIRLKRMVVSDESLKVIAKSFKNFKVLVLSSCEGFSTDGLAAVAANC 154
>gb|ACT53268.1| transport inhibitor response 1 [Nicotiana tabacum]
Length = 581
Score = 56.6 bits (135), Expect = 3e-06
Identities = 25/47 (53%), Positives = 35/47 (74%)
Frame = -2
Query: 250 KLHLKWMILSHNALHLLFSVFSNFKILVLKSCEGFSIHGLASIAANC 110
++ LK M+++ +L L+ F NFK+LVL SC+GF+ GLASIAANC
Sbjct: 105 EIRLKRMVITDESLELISKSFKNFKVLVLSSCDGFTTDGLASIAANC 151
>gb|EXC34697.1| Protein TRANSPORT INHIBITOR RESPONSE 1 [Morus notabilis]
Length = 582
Score = 56.2 bits (134), Expect = 4e-06
Identities = 28/57 (49%), Positives = 38/57 (66%)
Frame = -2
Query: 280 ASSLATTTSYKLHLKWMILSHNALHLLFSVFSNFKILVLKSCEGFSIHGLASIAANC 110
A ++A ++ LK M+++ +L L+ F NFK LVL SCEGFS GLA+IAANC
Sbjct: 95 AMAMAYPWLEEIRLKRMVVTDESLELIAKSFKNFKALVLSSCEGFSTDGLAAIAANC 151
>gb|EXB62856.1| Protein AUXIN SIGNALING F-BOX 2 [Morus notabilis]
Length = 573
Score = 56.2 bits (134), Expect = 4e-06
Identities = 28/47 (59%), Positives = 35/47 (74%)
Frame = -2
Query: 250 KLHLKWMILSHNALHLLFSVFSNFKILVLKSCEGFSIHGLASIAANC 110
+L LK M++S +L LL F+NFK LVL SCEGF+ GLA+IAANC
Sbjct: 104 ELRLKRMVVSDESLELLSRSFANFKSLVLVSCEGFTTDGLAAIAANC 150
>ref|NP_567135.1| protein TRANSPORT INHIBITOR RESPONSE 1 [Arabidopsis thaliana]
gi|68053009|sp|Q570C0.2|TIR1_ARATH RecName: Full=Protein
TRANSPORT INHIBITOR RESPONSE 1; AltName: Full=Weak
ethylene-insensitive protein 1 gi|146387658|pdb|2P1M|B
Chain B, Tir1-ask1 Complex Structure
gi|146387660|pdb|2P1N|B Chain B, Mechanism Of Auxin
Perception By The Tir1 Ubiqutin Ligase
gi|146387663|pdb|2P1N|E Chain E, Mechanism Of Auxin
Perception By The Tir1 Ubiqutin Ligase
gi|146387666|pdb|2P1O|B Chain B, Mechanism Of Auxin
Perception By The Tir1 Ubiquitin Ligase
gi|146387669|pdb|2P1P|B Chain B, Mechanism Of Auxin
Perception By The Tir1 Ubiquitin Ligase
gi|146387671|pdb|2P1Q|B Chain B, Mechanism Of Auxin
Perception By The Tir1 Ubiquitin Ligase
gi|185177934|pdb|3C6N|B Chain B, Small Molecule Agonists
And Antagonists Of F-Box Protein- Substrate Interactions
In Auxin Perception And Signaling
gi|185177936|pdb|3C6O|B Chain B, Small Molecule Agonists
And Antagonists Of F-Box Protein-Substrate Interactions
In Auxin Perception And Signaling
gi|185177938|pdb|3C6P|B Chain B, Small Molecule Agonists
And Antagonists Of F-Box Protein- Substrate Interactions
In Auxin Perception And Signaling
gi|2352492|gb|AAB69175.1| transport inhibitor response 1
[Arabidopsis thaliana] gi|2352494|gb|AAB69176.1|
transport inhibitor response 1 [Arabidopsis thaliana]
gi|7573427|emb|CAB87743.1| transport inhibitor response
1 (TIR1) [Arabidopsis thaliana]
gi|25054937|gb|AAN71945.1| putative transport inhibitor
response TIR1, AtFBL1 protein [Arabidopsis thaliana]
gi|332646898|gb|AEE80419.1| protein TRANSPORT INHIBITOR
RESPONSE 1 [Arabidopsis thaliana]
Length = 594
Score = 56.2 bits (134), Expect = 4e-06
Identities = 28/57 (49%), Positives = 38/57 (66%)
Frame = -2
Query: 280 ASSLATTTSYKLHLKWMILSHNALHLLFSVFSNFKILVLKSCEGFSIHGLASIAANC 110
A S + T ++ LK M+++ + L L+ F NFK+LVL SCEGFS GLA+IAA C
Sbjct: 99 AMSSSYTWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATC 155
>ref|XP_006359432.1| PREDICTED: protein TRANSPORT INHIBITOR RESPONSE 1-like [Solanum
tuberosum]
Length = 581
Score = 56.2 bits (134), Expect = 4e-06
Identities = 28/58 (48%), Positives = 40/58 (68%), Gaps = 4/58 (6%)
Frame = -2
Query: 271 LATTTSY----KLHLKWMILSHNALHLLFSVFSNFKILVLKSCEGFSIHGLASIAANC 110
LA + SY ++ LK M+++ +L L+ F NFK+LVL SC+GF+ GLA+IAANC
Sbjct: 94 LAMSRSYPWLEEIKLKRMVITDESLELISKSFKNFKVLVLSSCDGFTTDGLAAIAANC 151
>ref|XP_006306355.1| hypothetical protein CARUB_v10012250mg [Capsella rubella]
gi|482575066|gb|EOA39253.1| hypothetical protein
CARUB_v10012250mg [Capsella rubella]
Length = 577
Score = 56.2 bits (134), Expect = 4e-06
Identities = 28/47 (59%), Positives = 35/47 (74%)
Frame = -2
Query: 250 KLHLKWMILSHNALHLLFSVFSNFKILVLKSCEGFSIHGLASIAANC 110
+L LK M+++ +L LL F+NFK LVL SCEGF+ GLASIAANC
Sbjct: 104 ELRLKRMVVTDESLELLSRSFANFKSLVLVSCEGFTTDGLASIAANC 150
>gb|EMJ02922.1| hypothetical protein PRUPE_ppa003344mg [Prunus persica]
Length = 584
Score = 56.2 bits (134), Expect = 4e-06
Identities = 26/47 (55%), Positives = 34/47 (72%)
Frame = -2
Query: 250 KLHLKWMILSHNALHLLFSVFSNFKILVLKSCEGFSIHGLASIAANC 110
++ LK M+++ L L+ F NFK+LVL SCEGFS GLA+IAANC
Sbjct: 108 EIKLKRMVVTDETLELIAKSFKNFKLLVLSSCEGFSTDGLAAIAANC 154