BLASTX nr result
ID: Ephedra28_contig00029154
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra28_contig00029154
(482 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004228792.1| PREDICTED: uncharacterized protein LOC101263... 62 1e-07
gb|EMT00234.1| Pleiotropic drug resistance protein 15 [Aegilops ... 60 2e-07
gb|ABA94145.1| retrotransposon protein, putative, Ty3-gypsy subc... 60 3e-07
ref|XP_006366848.1| PREDICTED: uncharacterized protein LOC102605... 59 5e-07
ref|XP_006341875.1| PREDICTED: uncharacterized protein LOC102587... 59 5e-07
gb|ADU56211.1| gag-pol polyprotein [Solanum lycopersicum] 59 5e-07
gb|ABF97606.1| retrotransposon protein, putative, Ty3-gypsy subc... 58 1e-06
gb|AAT81703.1| putative reverse transcriptase, 3'-partial [Oryza... 58 1e-06
gb|AAR00610.1| putative reverse transcriptase [Oryza sativa Japo... 58 1e-06
gb|ABA98111.1| retrotransposon protein, putative, Ty3-gypsy subc... 58 1e-06
gb|ABA98459.1| retrotransposon protein, putative, Ty3-gypsy subc... 58 1e-06
gb|ABA94813.1| retrotransposon protein, putative, Ty3-gypsy subc... 58 1e-06
gb|ABA94790.1| retrotransposon protein, putative, Ty3-gypsy subc... 58 1e-06
gb|AAP53838.1| retrotransposon protein, putative, Ty3-gypsy subc... 58 1e-06
emb|CAE04199.2| OSJNBa0011E07.8 [Oryza sativa Japonica Group] 58 1e-06
emb|CAD39763.2| OSJNBa0059D20.6 [Oryza sativa Japonica Group] 57 2e-06
gb|AAV80394.1| polyprotein [Hordeum vulgare subsp. vulgare] 57 2e-06
gb|ABA94769.1| retrotransposon protein, putative, Ty3-gypsy subc... 57 3e-06
gb|AAX96594.1| retrotransposon protein, putative, Ty3-gypsy sub-... 57 3e-06
ref|XP_006356739.1| PREDICTED: uncharacterized protein LOC102595... 57 3e-06
>ref|XP_004228792.1| PREDICTED: uncharacterized protein LOC101263838, partial [Solanum
lycopersicum]
Length = 609
Score = 61.6 bits (148), Expect = 1e-07
Identities = 31/71 (43%), Positives = 45/71 (63%)
Frame = -3
Query: 399 KILSSKRYIQGLNESKVERLSFKEGDRVMLKVNPQRSSIRLGLYAKLSPRYCGLFTIIGK 220
K+L ++ + + KV L F EGD+V+LKV+P + +R G KLSPRY G F ++ +
Sbjct: 524 KLLVAQSRQKEYADRKVRDLEFMEGDQVLLKVSPMKGVMRFGKRCKLSPRYIGPFDVLKR 583
Query: 219 VSDWAYELELP 187
V + AYEL LP
Sbjct: 584 VGEVAYELALP 594
>gb|EMT00234.1| Pleiotropic drug resistance protein 15 [Aegilops tauschii]
Length = 1253
Score = 60.5 bits (145), Expect = 2e-07
Identities = 29/57 (50%), Positives = 40/57 (70%)
Frame = -3
Query: 360 ESKVERLSFKEGDRVMLKVNPQRSSIRLGLYAKLSPRYCGLFTIIGKVSDWAYELEL 190
+SK+ L+F+ GD V L+V+P + + R G+ KL+PRY G F IIGK D AY+LEL
Sbjct: 14 DSKLRDLAFEIGDHVYLRVSPMKGTRRFGIEGKLAPRYVGPFKIIGKRGDLAYQLEL 70
>gb|ABA94145.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 927
Score = 60.1 bits (144), Expect = 3e-07
Identities = 29/57 (50%), Positives = 38/57 (66%)
Frame = -3
Query: 354 KVERLSFKEGDRVMLKVNPQRSSIRLGLYAKLSPRYCGLFTIIGKVSDWAYELELPE 184
K L F+ GD+V+LKV+P + +R G KLSPRY G F+I+ +V AY LELPE
Sbjct: 854 KRRELEFEVGDQVLLKVSPTKGVVRFGTKGKLSPRYIGPFSIVERVGILAYRLELPE 910
>ref|XP_006366848.1| PREDICTED: uncharacterized protein LOC102605741 [Solanum tuberosum]
Length = 823
Score = 59.3 bits (142), Expect = 5e-07
Identities = 28/72 (38%), Positives = 45/72 (62%)
Frame = -3
Query: 402 NKILSSKRYIQGLNESKVERLSFKEGDRVMLKVNPQRSSIRLGLYAKLSPRYCGLFTIIG 223
+++L ++ + + KV L F G+RV+LKV+P + +R G KLSPRY G F I+
Sbjct: 552 DRLLMAQSRQKSYADRKVRNLEFMVGERVLLKVSPMKGVMRFGRKGKLSPRYIGPFEIVE 611
Query: 222 KVSDWAYELELP 187
++ + AY+L LP
Sbjct: 612 RIGEVAYQLALP 623
>ref|XP_006341875.1| PREDICTED: uncharacterized protein LOC102587225 [Solanum tuberosum]
Length = 819
Score = 59.3 bits (142), Expect = 5e-07
Identities = 35/105 (33%), Positives = 57/105 (54%)
Frame = -3
Query: 402 NKILSSKRYIQGLNESKVERLSFKEGDRVMLKVNPQRSSIRLGLYAKLSPRYCGLFTIIG 223
+++L ++ + + KV L F G+RV+LKV+P + +R G KLSPRY G F I+
Sbjct: 673 DRLLMAQSRKKSYADRKVRDLEFMVGERVLLKVSPMKGVMRFGKKGKLSPRYIGPFEIVE 732
Query: 222 KVSDWAYELELPEEWWYSMSICLHRGEVSRLHLKMEGSVSVTQRD 88
++ + AY+L LP S+ H + + H +G +V Q D
Sbjct: 733 RIGEVAYQLALPPRLSRVHSV-FHISMLKKYH---QGGATVIQWD 773
>gb|ADU56211.1| gag-pol polyprotein [Solanum lycopersicum]
Length = 367
Score = 59.3 bits (142), Expect = 5e-07
Identities = 29/71 (40%), Positives = 46/71 (64%)
Frame = -3
Query: 399 KILSSKRYIQGLNESKVERLSFKEGDRVMLKVNPQRSSIRLGLYAKLSPRYCGLFTIIGK 220
K+L+++ + + KV L F EG++V+LKV+P ++ +R G KL PRY G F ++ +
Sbjct: 185 KLLAAQSRQKEYADRKVRDLEFMEGEQVLLKVSPMKAVMRFGKRGKLIPRYIGPFEVLKR 244
Query: 219 VSDWAYELELP 187
V + AYEL LP
Sbjct: 245 VGEVAYELALP 255
>gb|ABF97606.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 702
Score = 58.2 bits (139), Expect = 1e-06
Identities = 28/59 (47%), Positives = 40/59 (67%)
Frame = -3
Query: 360 ESKVERLSFKEGDRVMLKVNPQRSSIRLGLYAKLSPRYCGLFTIIGKVSDWAYELELPE 184
+++ L FKEGD V LKV+P R + RL + KL+PRY G F I+ + + AY+L+LPE
Sbjct: 552 DTRRRNLEFKEGDYVYLKVSPMRGTKRLKVKGKLTPRYVGPFQIMARRGEVAYQLQLPE 610
>gb|AAT81703.1| putative reverse transcriptase, 3'-partial [Oryza sativa Japonica
Group]
Length = 672
Score = 58.2 bits (139), Expect = 1e-06
Identities = 28/59 (47%), Positives = 40/59 (67%)
Frame = -3
Query: 360 ESKVERLSFKEGDRVMLKVNPQRSSIRLGLYAKLSPRYCGLFTIIGKVSDWAYELELPE 184
+++ L FKEGD V LKV+P R + RL + KL+PRY G F I+ + + AY+L+LPE
Sbjct: 552 DTRRRNLEFKEGDYVYLKVSPMRGTKRLKVKGKLTPRYVGPFQIMARRGEVAYQLQLPE 610
>gb|AAR00610.1| putative reverse transcriptase [Oryza sativa Japonica Group]
Length = 843
Score = 58.2 bits (139), Expect = 1e-06
Identities = 28/59 (47%), Positives = 40/59 (67%)
Frame = -3
Query: 360 ESKVERLSFKEGDRVMLKVNPQRSSIRLGLYAKLSPRYCGLFTIIGKVSDWAYELELPE 184
+++ L FKEGD V LKV+P R + RL + KL+PRY G F I+ + + AY+L+LPE
Sbjct: 693 DTRRRNLEFKEGDYVYLKVSPMRGTKRLKVKGKLTPRYVGPFQIMARRGEVAYQLQLPE 751
>gb|ABA98111.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1407
Score = 57.8 bits (138), Expect = 1e-06
Identities = 28/59 (47%), Positives = 39/59 (66%)
Frame = -3
Query: 360 ESKVERLSFKEGDRVMLKVNPQRSSIRLGLYAKLSPRYCGLFTIIGKVSDWAYELELPE 184
+++ L FKEGD V LKV+P R + R + KL+PRY G F II + + AY+L+LPE
Sbjct: 1257 DTRRRNLEFKEGDYVYLKVSPMRGTKRFKVKGKLAPRYVGPFQIIARRGEVAYQLQLPE 1315
>gb|ABA98459.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1470
Score = 57.8 bits (138), Expect = 1e-06
Identities = 28/59 (47%), Positives = 39/59 (66%)
Frame = -3
Query: 360 ESKVERLSFKEGDRVMLKVNPQRSSIRLGLYAKLSPRYCGLFTIIGKVSDWAYELELPE 184
+++ L FKEGD V LKV+P R + R + KL+PRY G F II + + AY+L+LPE
Sbjct: 1320 DTRRRNLEFKEGDYVYLKVSPMRGTKRFKVKGKLAPRYVGPFQIIARRGEVAYQLQLPE 1378
>gb|ABA94813.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1712
Score = 57.8 bits (138), Expect = 1e-06
Identities = 28/59 (47%), Positives = 39/59 (66%)
Frame = -3
Query: 360 ESKVERLSFKEGDRVMLKVNPQRSSIRLGLYAKLSPRYCGLFTIIGKVSDWAYELELPE 184
+++ L FKEGD V LKV+P R + R + KL+PRY G F II + + AY+L+LPE
Sbjct: 1604 DTRRRNLEFKEGDYVYLKVSPMRGTKRFKVKGKLAPRYVGPFQIIARRGEVAYQLQLPE 1662
>gb|ABA94790.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 193
Score = 57.8 bits (138), Expect = 1e-06
Identities = 28/53 (52%), Positives = 36/53 (67%)
Frame = -3
Query: 342 LSFKEGDRVMLKVNPQRSSIRLGLYAKLSPRYCGLFTIIGKVSDWAYELELPE 184
L F+ GD+V+LKV+P + +R G KLSPRY G F I+ +V AY LELPE
Sbjct: 42 LEFEVGDQVLLKVSPTKGVVRFGTKDKLSPRYIGPFLIVERVGILAYRLELPE 94
>gb|AAP53838.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1470
Score = 57.8 bits (138), Expect = 1e-06
Identities = 28/59 (47%), Positives = 39/59 (66%)
Frame = -3
Query: 360 ESKVERLSFKEGDRVMLKVNPQRSSIRLGLYAKLSPRYCGLFTIIGKVSDWAYELELPE 184
+++ L FKEGD V LKV+P R + R + KL+PRY G F II + + AY+L+LPE
Sbjct: 1320 DTRRRNLEFKEGDYVYLKVSPMRGTKRFKVKGKLAPRYVGPFQIIARRGEVAYQLQLPE 1378
>emb|CAE04199.2| OSJNBa0011E07.8 [Oryza sativa Japonica Group]
Length = 1251
Score = 57.8 bits (138), Expect = 1e-06
Identities = 28/59 (47%), Positives = 39/59 (66%)
Frame = -3
Query: 360 ESKVERLSFKEGDRVMLKVNPQRSSIRLGLYAKLSPRYCGLFTIIGKVSDWAYELELPE 184
+++ L FKEGD V LKV+P R + R + KL+PRY G F II + + AY+L+LPE
Sbjct: 1101 DTRRRNLEFKEGDYVYLKVSPMRGTKRFKVKGKLAPRYVGPFQIIARRGEVAYQLQLPE 1159
>emb|CAD39763.2| OSJNBa0059D20.6 [Oryza sativa Japonica Group]
Length = 1470
Score = 57.4 bits (137), Expect = 2e-06
Identities = 27/59 (45%), Positives = 39/59 (66%)
Frame = -3
Query: 360 ESKVERLSFKEGDRVMLKVNPQRSSIRLGLYAKLSPRYCGLFTIIGKVSDWAYELELPE 184
+++ L FKEGD + LKV+P R + R + KL+PRY G F II + + AY+L+LPE
Sbjct: 1320 DTRRRNLEFKEGDYIYLKVSPMRGTKRFKVKGKLAPRYVGPFQIIARRGEVAYQLQLPE 1378
>gb|AAV80394.1| polyprotein [Hordeum vulgare subsp. vulgare]
Length = 1486
Score = 57.4 bits (137), Expect = 2e-06
Identities = 32/79 (40%), Positives = 45/79 (56%), Gaps = 4/79 (5%)
Frame = -3
Query: 411 KMCNKILSSKRYIQGLNES----KVERLSFKEGDRVMLKVNPQRSSIRLGLYAKLSPRYC 244
KMC I + R Q +S K +S++ D V LKV+P + R G+ KL+PR+
Sbjct: 1316 KMCRIIRDNLRAAQSRQKSYYDGKHRDMSYELDDFVYLKVSPMKGMQRFGIKGKLAPRFV 1375
Query: 243 GLFTIIGKVSDWAYELELP 187
G F ++GK D AY+LELP
Sbjct: 1376 GPFRVVGKRGDLAYQLELP 1394
>gb|ABA94769.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1747
Score = 57.0 bits (136), Expect = 3e-06
Identities = 27/54 (50%), Positives = 36/54 (66%)
Frame = -3
Query: 342 LSFKEGDRVMLKVNPQRSSIRLGLYAKLSPRYCGLFTIIGKVSDWAYELELPEE 181
L F+EGD V L+V+P R R G+ KL+PRY G + I + + AY+LELPEE
Sbjct: 1626 LEFEEGDHVYLRVSPLRGMRRFGMSGKLAPRYIGPYLITARRGEVAYQLELPEE 1679
>gb|AAX96594.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza sativa
Japonica Group] gi|62734535|gb|AAX96644.1|
retrotransposon protein, putative, Ty3-gypsy sub-class
[Oryza sativa Japonica Group] gi|77550407|gb|ABA93204.1|
retrotransposon protein, putative, Ty3-gypsy subclass
[Oryza sativa Japonica Group]
Length = 1158
Score = 57.0 bits (136), Expect = 3e-06
Identities = 28/59 (47%), Positives = 39/59 (66%)
Frame = -3
Query: 360 ESKVERLSFKEGDRVMLKVNPQRSSIRLGLYAKLSPRYCGLFTIIGKVSDWAYELELPE 184
+++ L FKEGD V LKV+P R + R + KL+PRY G F II + + AY+L+LPE
Sbjct: 1008 DTRRRNLEFKEGDYVYLKVSPMRGTKRFKVKGKLAPRYVGPFQIITRRGEVAYQLQLPE 1066
>ref|XP_006356739.1| PREDICTED: uncharacterized protein LOC102595791 [Solanum tuberosum]
Length = 774
Score = 56.6 bits (135), Expect = 3e-06
Identities = 29/54 (53%), Positives = 35/54 (64%)
Frame = -3
Query: 342 LSFKEGDRVMLKVNPQRSSIRLGLYAKLSPRYCGLFTIIGKVSDWAYELELPEE 181
L FK GD V LKV+P + +R G KLSPRY G + II +V AYEL LP+E
Sbjct: 32 LEFKVGDWVYLKVSPMKGVVRFGKKGKLSPRYVGPYEIIRRVGKVAYELGLPKE 85